Carg08658 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTCTCGCCCTTGATTTACAGGAATTTATTCTCCGGGCAAGAGTGTTGAAACTGTATAGGCAGGCTTTAAGAACTACTCGCAAAGCTCCTGTTCACGCTCGAGGTTAAGCTTTTGATTATGATCTTACATTGTTCTTTATGCATTTAATTTTTTCCCGCCTTCTCCGCATGAACCAAGCTTAAATTGGATTGGGCGTCGTGTTTAGTCGATTGCCTGTTCTGCGTGCTTAAAGTTCTGAGACTGTGTGCTTTGAAACAGAAGAACTGAGCCATACGATCAGACAAGAAATGGAAAACAACCGGAGCTGCAGTGATAGACAGAAGGTTAGATTTCTGCTCAGTGAGGGAATGGAGAGATTAAAGCGTTTAGATGAGATGTTGGATATGCAGGGCCATTCATAA ATGGTTCTCGCCCTTGATTTACAGGAATTTATTCTCCGGGCAAGAGTGTTGAAACTGTATAGGCAGGCTTTAAGAACTACTCGCAAAGCTCCTGTTCACGCTCGAGAAGAACTGAGCCATACGATCAGACAAGAAATGGAAAACAACCGGAGCTGCAGTGATAGACAGAAGGTTAGATTTCTGCTCAGTGAGGGAATGGAGAGATTAAAGCGTTTAGATGAGATGTTGGATATGCAGGGCCATTCATAA ATGGTTCTCGCCCTTGATTTACAGGAATTTATTCTCCGGGCAAGAGTGTTGAAACTGTATAGGCAGGCTTTAAGAACTACTCGCAAAGCTCCTGTTCACGCTCGAGAAGAACTGAGCCATACGATCAGACAAGAAATGGAAAACAACCGGAGCTGCAGTGATAGACAGAAGGTTAGATTTCTGCTCAGTGAGGGAATGGAGAGATTAAAGCGTTTAGATGAGATGTTGGATATGCAGGGCCATTCATAA MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGHS Homology
BLAST of Carg08658 vs. NCBI nr
Match: KAG7024135.1 (LYR motif-containing protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 154.5 bits (389), Expect = 4.1e-34 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of Carg08658 vs. NCBI nr
Match: KAG6591251.1 (LYR motif-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 152.5 bits (384), Expect = 1.6e-33 Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0
BLAST of Carg08658 vs. NCBI nr
Match: XP_023535371.1 (uncharacterized protein LOC111796833 [Cucurbita pepo subsp. pepo] >XP_023535372.1 uncharacterized protein LOC111796833 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 151.0 bits (380), Expect = 4.5e-33 Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 0
BLAST of Carg08658 vs. NCBI nr
Match: XP_022975831.1 (uncharacterized protein LOC111476418 [Cucurbita maxima] >XP_022975832.1 uncharacterized protein LOC111476418 [Cucurbita maxima]) HSP 1 Score: 149.8 bits (377), Expect = 1.0e-32 Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 0
BLAST of Carg08658 vs. NCBI nr
Match: XP_022936861.1 (uncharacterized protein LOC111443321 [Cucurbita moschata] >XP_022936862.1 uncharacterized protein LOC111443321 [Cucurbita moschata]) HSP 1 Score: 149.4 bits (376), Expect = 1.3e-32 Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 0
BLAST of Carg08658 vs. ExPASy Swiss-Prot
Match: Q8R033 (LYR motif-containing protein 2 OS=Mus musculus OX=10090 GN=Lyrm2 PE=3 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 7.8e-04 Identity = 26/74 (35.14%), Postives = 46/74 (62.16%), Query Frame = 0
BLAST of Carg08658 vs. ExPASy TrEMBL
Match: A0A6J1IFA5 (uncharacterized protein LOC111476418 OS=Cucurbita maxima OX=3661 GN=LOC111476418 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 4.9e-33 Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 0
BLAST of Carg08658 vs. ExPASy TrEMBL
Match: A0A6J1F8N3 (uncharacterized protein LOC111443321 OS=Cucurbita moschata OX=3662 GN=LOC111443321 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 6.4e-33 Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 0
BLAST of Carg08658 vs. ExPASy TrEMBL
Match: A0A6J1CHJ1 (uncharacterized protein LOC111011218 OS=Momordica charantia OX=3673 GN=LOC111011218 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 4.3e-29 Identity = 70/82 (85.37%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of Carg08658 vs. ExPASy TrEMBL
Match: A0A6J1FM54 (uncharacterized protein LOC111446466 OS=Cucurbita moschata OX=3662 GN=LOC111446466 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.8e-28 Identity = 70/81 (86.42%), Postives = 77/81 (95.06%), Query Frame = 0
BLAST of Carg08658 vs. ExPASy TrEMBL
Match: W9RMC8 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_014312 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 2.0e-26 Identity = 65/82 (79.27%), Postives = 74/82 (90.24%), Query Frame = 0
BLAST of Carg08658 vs. TAIR 10
Match: AT1G76065.1 (LYR family of Fe/S cluster biogenesis protein ) HSP 1 Score: 114.0 bits (284), Expect = 5.7e-26 Identity = 56/80 (70.00%), Postives = 68/80 (85.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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