Carg08541 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08541
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Dof zinc finger protein
Location	Carg_Chr02: 5080066 .. 5081266 (+)
RNA-Seq Expression	Carg08541
Synteny	Carg08541

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAGAAAAAAAAAAAAAAAAACAAAAAAAAACAAAAAATCCTTCAATTCTATGGATACTGCTCAATGGCCTCAGGTAATTTTGTTGTTGTTCTCCTTCTTGTTCTTCATGTTCTTCATGATCTGTTCTCAAAGTTTGAAACTTTTGTTTGTGGGGTTTGGTTTTTAAGCATGGCCATGAAGAACAAAACAAAAGAACACTACTTTTTTTTTTTTTTTTTTTTTTTGAATTTGGGTTTCCCTTTGTTTGATCTCCACTTCCCCCGAAGTATTGAGTGACAAAATTGATACTTTCTTCGAACCATTTTGGCTGTTTCTCCTTTCTCTTTAATTTAATTTTTGGGTCAAAAGGAAAAGGGTTATAAAGCATAAAGCAATCAGCTTTGTTTTGTTATGTCTGTCAAATTTACCATGTTTTGTTGTTTTGATCTTGTTTTTAGGAGATTGTGTTGAAACCCAATGAAGAAATTGTGGCAAACACTTGCCCAAAACCAAGTGGTGTATCTGTTGTTGAGAGGAAAATTAGACCACAAAAGGAACAAGCTTTGAATTGTCCGAGGTGCAATTCCAGCAATACTAAGTTTTGTTATTACAATAATTATAGCCTCACACAACCAAGATACTTTTGCAAAACATGTCGAAGGTATTGGACTGAAGGTGGTTCCTTGAGAAACATTCCTGTCGGAGGTGGCTCAAGGAAGAACAAAAGGCCTTCTTCTTCTTCTACTACTACTTCTTCTAATTCTTCTTCTTCTACTTTATCCACATCTCCCACTTGTTCTAATCTTCCTCCAAAGAACCCTCTTCATCTCCCTCAAACCCCTAAAACCACTCCTTCCCAAGATCTCAATTTGTCCTTTCCGTCGTCCAATCAGCTTTCGGCCATGGAGCTTCTCACCGGGATGGCGACCAACTCTAAGGGTTTAAATTGTTTCATTCCAATGCCTTCTATTGTCCCTGATCCTGCCTCCGTTTACGCATCGGGGTTTCCTGATCTCCATGATCAATTCAAGCCGAGCCTCGGATTCTCTCTCGATGGATATGGCGTTGTCCCGGGCGAGGCTAGCAATGGCGGGGGAGGGAGGGTTATGCAGCTGCCATTTGAGGATTTGAAGCAAGGGGCTAATGGAGTTGAGGAAGGGAAAGAGCATGGAGATTCAAGTGGGTATTGGAGTGGGATGTTGGGTGGAGGATCATGGTAA

mRNA sequence

ATAAGAAAAAAAAAAAAAAAAACAAAAAAAAACAAAAAATCCTTCAATTCTATGGATACTGCTCAATGGCCTCAGGAGATTGTGTTGAAACCCAATGAAGAAATTGTGGCAAACACTTGCCCAAAACCAAGTGGTGTATCTGTTGTTGAGAGGAAAATTAGACCACAAAAGGAACAAGCTTTGAATTGTCCGAGGTGCAATTCCAGCAATACTAAGTTTTGTTATTACAATAATTATAGCCTCACACAACCAAGATACTTTTGCAAAACATGTCGAAGGTATTGGACTGAAGGTGGTTCCTTGAGAAACATTCCTGTCGGAGGTGGCTCAAGGAAGAACAAAAGGCCTTCTTCTTCTTCTACTACTACTTCTTCTAATTCTTCTTCTTCTACTTTATCCACATCTCCCACTTGTTCTAATCTTCCTCCAAAGAACCCTCTTCATCTCCCTCAAACCCCTAAAACCACTCCTTCCCAAGATCTCAATTTGTCCTTTCCGTCGTCCAATCAGCTTTCGGCCATGGAGCTTCTCACCGGGATGGCGACCAACTCTAAGGGTTTAAATTGTTTCATTCCAATGCCTTCTATTGTCCCTGATCCTGCCTCCGTTTACGCATCGGGGTTTCCTGATCTCCATGATCAATTCAAGCCGAGCCTCGGATTCTCTCTCGATGGATATGGCGTTGTCCCGGGCGAGGCTAGCAATGGCGGGGGAGGGAGGGTTATGCAGCTGCCATTTGAGGATTTGAAGCAAGGGGCTAATGGAGTTGAGGAAGGGAAAGAGCATGGAGATTCAAGTGGGTATTGGAGTGGGATGTTGGGTGGAGGATCATGGTAA

Coding sequence (CDS)

ATGGATACTGCTCAATGGCCTCAGGAGATTGTGTTGAAACCCAATGAAGAAATTGTGGCAAACACTTGCCCAAAACCAAGTGGTGTATCTGTTGTTGAGAGGAAAATTAGACCACAAAAGGAACAAGCTTTGAATTGTCCGAGGTGCAATTCCAGCAATACTAAGTTTTGTTATTACAATAATTATAGCCTCACACAACCAAGATACTTTTGCAAAACATGTCGAAGGTATTGGACTGAAGGTGGTTCCTTGAGAAACATTCCTGTCGGAGGTGGCTCAAGGAAGAACAAAAGGCCTTCTTCTTCTTCTACTACTACTTCTTCTAATTCTTCTTCTTCTACTTTATCCACATCTCCCACTTGTTCTAATCTTCCTCCAAAGAACCCTCTTCATCTCCCTCAAACCCCTAAAACCACTCCTTCCCAAGATCTCAATTTGTCCTTTCCGTCGTCCAATCAGCTTTCGGCCATGGAGCTTCTCACCGGGATGGCGACCAACTCTAAGGGTTTAAATTGTTTCATTCCAATGCCTTCTATTGTCCCTGATCCTGCCTCCGTTTACGCATCGGGGTTTCCTGATCTCCATGATCAATTCAAGCCGAGCCTCGGATTCTCTCTCGATGGATATGGCGTTGTCCCGGGCGAGGCTAGCAATGGCGGGGGAGGGAGGGTTATGCAGCTGCCATTTGAGGATTTGAAGCAAGGGGCTAATGGAGTTGAGGAAGGGAAAGAGCATGGAGATTCAAGTGGGTATTGGAGTGGGATGTTGGGTGGAGGATCATGGTAA

Protein sequence

MDTAQWPQEIVLKPNEEIVANTCPKPSGVSVVERKIRPQKEQALNCPRCNSSNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTTTSSNSSSSTLSTSPTCSNLPPKNPLHLPQTPKTTPSQDLNLSFPSSNQLSAMELLTGMATNSKGLNCFIPMPSIVPDPASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEASNGGGGRVMQLPFEDLKQGANGVEEGKEHGDSSGYWSGMLGGGSW

Homology

[Close]

BLAST of Carg08541 vs. NCBI nr
Match: KAG6605597.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035508.1 Dof zinc finger protein DOF4.6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 525.4 bits (1352), Expect = 2.8e-145
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0


Query: 1   MDTAQWPQEIVLKPNEEIVANTCPKPSGVSVVERKIRPQKEQALNCPRCNSSNTKFCYYN 60
           MDTAQWPQEIVLKPNEEIVANTCPKPSGVSVVERKIRPQKEQALNCPRCNSSNTKFCYYN
Sbjct: 1   MDTAQWPQEIVLKPNEEIVANTCPKPSGVSVVERKIRPQKEQALNCPRCNSSNTKFCYYN 60

Query: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTTTSSNSSSSTLSTSPT 120
           NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTTTSSNSSSSTLSTSPT
Sbjct: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTTTSSNSSSSTLSTSPT 120

Query: 121 CSNLPPKNPLHLPQTPKTTPSQDLNLSFPSSNQLSAMELLTGMATNSKGLNCFIPMPSIV 180
           CSNLPPKNPLHLPQTPKTTPSQDLNLSFPSSNQLSAMELLTGMATNSKGLNCFIPMPSIV
Sbjct: 121 CSNLPPKNPLHLPQTPKTTPSQDLNLSFPSSNQLSAMELLTGMATNSKGLNCFIPMPSIV 180

Query: 181 PDPASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEASNGGGGRVMQLPFEDLKQGANGVE 240
           PDPASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEASNGGGGRVMQLPFEDLKQGANGVE
Sbjct: 181 PDPASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEASNGGGGRVMQLPFEDLKQGANGVE 240

Query: 241 EGKEHGDSSGYWSGMLGGGSW 262
           EGKEHGDSSGYWSGMLGGGSW
Sbjct: 241 EGKEHGDSSGYWSGMLGGGSW 261

[Close]

BLAST of Carg08541 vs. NCBI nr
Match: XP_022957649.1 (dof zinc finger protein DOF4.6-like [Cucurbita moschata])

HSP 1 Score: 515.0 bits (1325), Expect = 3.8e-142
Identity = 259/262 (98.85%), Postives = 259/262 (98.85%), Query Frame = 0


Query: 1   MDTAQWPQEIVLKPNEEIVANTCPKPSGVSVVERKIRPQKEQALNCPRCNSSNTKFCYYN 60
           MDTAQWPQEIVLKPNEEIVANTCPK SGVS VERKIRPQKEQALNCPRCNSSNTKFCYYN
Sbjct: 1   MDTAQWPQEIVLKPNEEIVANTCPKASGVSGVERKIRPQKEQALNCPRCNSSNTKFCYYN 60

Query: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTTTSSN-SSSSTLSTSP 120
           NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTTTSSN SSSSTLSTSP
Sbjct: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTTTSSNSSSSSTLSTSP 120

Query: 121 TCSNLPPKNPLHLPQTPKTTPSQDLNLSFPSSNQLSAMELLTGMATNSKGLNCFIPMPSI 180
           TCSNLPPKNPLHLPQTPKTTPSQDLNLSFPSSNQLSAMELLTGMATNSKGLNCFIPMPSI
Sbjct: 121 TCSNLPPKNPLHLPQTPKTTPSQDLNLSFPSSNQLSAMELLTGMATNSKGLNCFIPMPSI 180

Query: 181 VPDPASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEASNGGGGRVMQLPFEDLKQGANGV 240
           VPDPASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEASNGGGGRVMQLPFEDLKQGANGV
Sbjct: 181 VPDPASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEASNGGGGRVMQLPFEDLKQGANGV 240

Query: 241 EEGKEHGDSSGYWSGMLGGGSW 262
           EEGKEHGDSSGYWSGMLGGGSW
Sbjct: 241 EEGKEHGDSSGYWSGMLGGGSW 262

[Close]

BLAST of Carg08541 vs. NCBI nr
Match: XP_022996260.1 (dof zinc finger protein DOF4.6-like [Cucurbita maxima])

HSP 1 Score: 506.5 bits (1303), Expect = 1.3e-139
Identity = 251/261 (96.17%), Postives = 258/261 (98.85%), Query Frame = 0


Query: 1   MDTAQWPQEIVLKPNEEIVANTCPKPSGVSVVERKIRPQKEQALNCPRCNSSNTKFCYYN 60
           MDTAQWPQEI LKPNEEIVANTCPKPSGVSV+ERKIRPQKEQALNCPRCNS+NTKFCYYN
Sbjct: 1   MDTAQWPQEIALKPNEEIVANTCPKPSGVSVLERKIRPQKEQALNCPRCNSTNTKFCYYN 60

Query: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTTTSSNSSSSTLSTSPT 120
           NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSS T+S++SSSSTLSTSPT
Sbjct: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSS-TSSNSSSSSTLSTSPT 120

Query: 121 CSNLPPKNPLHLPQTPKTTPSQDLNLSFPSSNQLSAMELLTGMATNSKGLNCFIPMPSIV 180
           CSNLPPK PLHLPQTPKTTPSQDLNLSFPSSNQLSAMELLTGMA+NSKGLNCFIPMPSI+
Sbjct: 121 CSNLPPKKPLHLPQTPKTTPSQDLNLSFPSSNQLSAMELLTGMASNSKGLNCFIPMPSII 180

Query: 181 PDPASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEASNGGGGRVMQLPFEDLKQGANGVE 240
           PDPASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEASNGGGGRVMQLPFEDLKQGANGVE
Sbjct: 181 PDPASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEASNGGGGRVMQLPFEDLKQGANGVE 240

Query: 241 EGKEHGDSSGYWSGMLGGGSW 262
           EGKEHGDSSGYWSGMLGGGSW
Sbjct: 241 EGKEHGDSSGYWSGMLGGGSW 260

[Close]

BLAST of Carg08541 vs. NCBI nr
Match: XP_023534480.1 (dof zinc finger protein DOF4.6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 505.8 bits (1301), Expect = 2.3e-139
Identity = 257/265 (96.98%), Postives = 257/265 (96.98%), Query Frame = 0


Query: 1   MDTAQWPQEIVLKPNEEIVANTCPKPSGVSVVERKIRPQKEQALNCPRCNSSNTKFCYYN 60
           MDTAQWPQEIVLKPNEEIV NTCPKPSGVSVVERKIR QKEQALNCPRCNSSNTKFCYYN
Sbjct: 1   MDTAQWPQEIVLKPNEEIVGNTCPKPSGVSVVERKIRAQKEQALNCPRCNSSNTKFCYYN 60

Query: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSS---TTTSSN-SSSSTLS 120
           NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSS   TTTSSN SSSSTLS
Sbjct: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSSTTTTTSSNSSSSSTLS 120

Query: 121 TSPTCSNLPPKNPLHLPQTPKTTPSQDLNLSFPSSNQLSAMELLTGMATNSKGLNCFIPM 180
           TSPTCSNLPPKNPLHLPQTPKTTPSQDLNLSFPSSNQLSAMELLTGMATNSK LNCFIPM
Sbjct: 121 TSPTCSNLPPKNPLHLPQTPKTTPSQDLNLSFPSSNQLSAMELLTGMATNSKALNCFIPM 180

Query: 181 PSIVPDPASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEASNGGGGRVMQLPFEDLKQGA 240
           PSIVPDPASVYASGFP LHDQFKPSLGFSLDGYGVVPGEASNGGGGRVMQLPFEDLKQGA
Sbjct: 181 PSIVPDPASVYASGFPHLHDQFKPSLGFSLDGYGVVPGEASNGGGGRVMQLPFEDLKQGA 240

Query: 241 NGVEEGKEHGDSSGYWSGMLGGGSW 262
           NGVEEGKEHGDSSGYWSGMLGGGSW
Sbjct: 241 NGVEEGKEHGDSSGYWSGMLGGGSW 265

[Close]

BLAST of Carg08541 vs. NCBI nr
Match: XP_022156136.1 (dof zinc finger protein DOF4.6 [Momordica charantia])

HSP 1 Score: 375.6 bits (963), Expect = 3.6e-100
Identity = 211/297 (71.04%), Postives = 230/297 (77.44%), Query Frame = 0


Query: 1   MDTAQWPQEIVLKPNEEIVANTCPKPSGVSVVERKIRPQKEQALNCPRCNSSNTKFCYYN 60
           MDTAQWPQEIV+KP EEIVANTCPKP GVSV+ERKIRP KEQALNCPRCNS+NTKFCYYN
Sbjct: 1   MDTAQWPQEIVVKPIEEIVANTCPKP-GVSVLERKIRPHKEQALNCPRCNSTNTKFCYYN 60

Query: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTTTSSNSSSSTLSTSPT 120
           NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSS+T SS++S+ TL     
Sbjct: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSSTISSSNSAPTLPNK-- 120

Query: 121 CSNLPPKNPLHLPQTPKTTPSQDLNLSFPSSN---------------------------- 180
             +LP +NP      P     QDLNL+FPSS+                            
Sbjct: 121 IPDLPHQNPKSTTLNP-----QDLNLAFPSSSHHHQQDHFSSSNNNLSEIVVSGNPPIGA 180

Query: 181 ------QLSAMELLTGMATNSKGLNCFIPMPSIVPDPASVYASGFPDLHDQFKPSLGFSL 240
                 QLSAMELLTGMA NS+GLNCF+PMP  VPDPASVY +GFPDLHDQFKPSLGFSL
Sbjct: 181 PPSSSQQLSAMELLTGMA-NSRGLNCFMPMP--VPDPASVYTAGFPDLHDQFKPSLGFSL 240

Query: 241 DGYGVVPGEASNGGGGRVMQLPFEDLKQGAN-GVEEGK-EHGDSSGYWSGMLGGGSW 262
           DGYGVVP EASN GGGR++QLPFEDLKQG+N GVEEGK + GDSSGYW+GMLGGGSW
Sbjct: 241 DGYGVVPAEASN-GGGRLLQLPFEDLKQGSNGGVEEGKGQQGDSSGYWTGMLGGGSW 285

[Close]

BLAST of Carg08541 vs. ExPASy Swiss-Prot
Match: Q8LAP8 (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 199.9 bits (507), Expect = 3.5e-50
Identity = 151/348 (43.39%), Postives = 175/348 (50.29%), Query Frame = 0


Query: 1   MDTAQWPQEIVLKPNEEIVANTCPKPSGVSVV---------ERKIRPQKEQALNCPRCNS 60
           MDTAQWPQEIV+KP EEIV NTCPKP    +          ERK RP+K+QA+NCPRCNS
Sbjct: 1   MDTAQWPQEIVVKPLEEIVTNTCPKPQPQPLQPQQPPSVGGERKARPEKDQAVNCPRCNS 60

Query: 61  SNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTTTSSNSS 120
           +NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRNIPVGGGSRKNKR  SSS+  S+N S
Sbjct: 61  TNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKRSHSSSSDISNNHS 120

Query: 121 SSTLSTSPTCSNLPPKNPLHL---------PQTPK--TTPSQDLNLSFP----------- 180
               ST P        +  HL          Q PK   T  QDLNL F            
Sbjct: 121 D---STQPATKKHLSDHHHHLMSMSQQGLTGQNPKFLETTQQDLNLGFSPHGMIRTNFTD 180

Query: 181 ------------------------SSNQLSAMELLTGMATNSKGLN-CFIPMPSIVPDPA 240
                                   S+   S+++L+   + N    N  F+  P    DPA
Sbjct: 181 LIHNIGNNTNKSNNNNNPLIVSSCSAMATSSLDLIRNNSNNGNSSNSSFMGFPVHNQDPA 240

Query: 241 SVYASGFPDLHDQFKPS------LGFSLDGY-------GVVPGEASNGGGGRV---MQLP 262
           S    GF  + D +KP       LGFSLD +       G   GE    GG  V      P
Sbjct: 241 S---GGF-SMQDHYKPCNTNTTLLGFSLDHHHNNGFHGGFQGGEEGGEGGDDVNGRHLFP 300

[Close]

BLAST of Carg08541 vs. ExPASy Swiss-Prot
Match: Q84JQ8 (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 4.3e-48
Identity = 153/355 (43.10%), Postives = 188/355 (52.96%), Query Frame = 0


Query: 1   MDTAQWPQEIVLKPNEEIVANTCPK-----PSGVSVVERKIRPQKEQALNCPRCNSSNTK 60
           MDTA+WPQE V+KP  EIV NTC K     PS  + VERK RP+K+QALNCPRCNS NTK
Sbjct: 1   MDTAKWPQEFVVKPMNEIVTNTCLKQQSNPPSPATPVERKARPEKDQALNCPRCNSLNTK 60

Query: 61  FCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTTTSSNSSSSTL 120
           FCYYNNYSLTQPRYFCK CRRYWT GGSLRNIPVGGG RKNKR SS+S+++S +SSSS+ 
Sbjct: 61  FCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGGVRKNKRSSSNSSSSSPSSSSSSK 120

Query: 121 STSPTCSNLPPKNPLHL-PQTPKTTPS-----------------QDLNLSF--------- 180
                 +N P     HL P+  +   +                 +DLNL+F         
Sbjct: 121 KPLFANNNTPTPPLPHLNPKIGEAAATKVQDLTFSQGFGNAHEVKDLNLAFSQGFGIGHN 180

Query: 181 ------------PSSNQ--------LSAMELLTGMATNSKGLN---CFIPMPSIVPDPAS 240
                       PSS+          S++ELL G++++S   N    F+  P++    +S
Sbjct: 181 HHSSIPEFLQVVPSSSMKNNPLVSTSSSLELL-GISSSSASSNSRPAFMSYPNV--HDSS 240

Query: 241 VY-ASGF----PDLHDQFKPSLGFSLDGYGVVPGEASNGG--GGRVMQLPFEDL------ 262
           VY ASGF    P   +  +P+LGFSLDG   +  E  + G   GR + LPFE L      
Sbjct: 241 VYTASGFGLSYPQFQEFMRPALGFSLDGGDPLRQEEGSSGTNNGRPL-LPFESLLKLPVS 300

[Close]

BLAST of Carg08541 vs. ExPASy Swiss-Prot
Match: Q9SXG8 (Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 3.3e-40
Identity = 126/315 (40.00%), Postives = 159/315 (50.48%), Query Frame = 0


Query: 27  SGVSVVERKIRPQKEQALNCPRCNSSNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRN 86
           +G    ER+ RPQKE+ALNCPRCNS+NTKFCYYNNYSL QPRYFCKTCRRYWTEGGSLRN
Sbjct: 61  AGAGSTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRN 120

Query: 87  IPVGGGSRKNKRPSSSSTTTS--SNSSSSTLSTSPTCSNLPPKNPLHLPQTPKTT--PSQ 146
           +PVGGGSRKNKR SSS+ + S  S S+++++ TS + S           + PK     +Q
Sbjct: 121 VPVGGGSRKNKRSSSSAASASPASASTANSVVTSASMSMSMASTGGGASKNPKLVHEGAQ 180

Query: 147 DLNLSFPSSNQLSAMELLTG---------------MATNSKG------------LNCFIP 206
           DLNL+FP    L A                     M TN +G              C++P
Sbjct: 181 DLNLAFPHHGGLQAPGEFPAFPSLESSSVCNPGGPMGTNGRGGGALSAMELLRSTGCYMP 240

Query: 207 MPSIVPDPASVYASGF--------PDLHDQFKPSLGFSLDGYGVVPGEASNGGG------ 261
           +   +  PA     GF        P      +  LGFSLD +G V G ++ G G      
Sbjct: 241 LQVPMQMPAEYATPGFALGEFRAPPPPPQSSQSLLGFSLDAHGSVGGPSAAGFGSSAGLQ 300

[Close]

BLAST of Carg08541 vs. ExPASy Swiss-Prot
Match: B9F1L8 (Dof zinc finger protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF2 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 4.8e-39
Identity = 131/368 (35.60%), Postives = 169/368 (45.92%), Query Frame = 0


Query: 1   MDTAQWPQEI-VLKPNEEIVANTCPKPSGVS----------------------------- 60
           MD A W Q + ++KP EE++    P P+G S                             
Sbjct: 1   MDAAHWHQGLGLVKPMEEMLMGANPNPNGSSNQPPPPPSSAASAQRPIAPPAAGAAAGAG 60

Query: 61  ------VVERKIRPQKEQALNCPRCNSSNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSL 120
                   ER+ RPQKE+ALNCPRCNS+NTKFCYYNNYSL QPRYFCKTCRRYWTEGGSL
Sbjct: 61  AAGAGAGTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSL 120

Query: 121 RNIPVGGGSRKNKRPSSSSTTTSSNSSSSTLSTSPTCS-NLPPKNPLHLPQTPKTTPSQD 180
           RN+PVGGGSRKNKR SSS   +++ S+S++ + S +    L  KNP  + +      +QD
Sbjct: 121 RNVPVGGGSRKNKRSSSSVVPSAAASASTSAAVSGSVPVGLAAKNPKLMHE-----GAQD 180

Query: 181 LNLSFP----------------------------------------SSNQLSAMELLTGM 240
           LNL+FP                                        S    SAMELL   
Sbjct: 181 LNLAFPHHHGRALQPPEFTAFPSLESSSVCNPGGNLAAANGAGGRGSVGAFSAMELL--- 240

Query: 241 ATNSKGLNCFIPMPSIVP--DPASVYASGF------------PDLHDQFKPSLGFSLDGY 259
               +   C++P+P + P   PA   A+GF                 Q +  LGFSLD +
Sbjct: 241 ----RSTGCYVPLPQMAPLGMPAEYAAAGFHLGEFRMPPPPQQQQQQQAQTVLGFSLDTH 300

[Close]

BLAST of Carg08541 vs. ExPASy Swiss-Prot
Match: Q43385 (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV=2)

HSP 1 Score: 161.8 bits (408), Expect = 1.1e-38
Identity = 112/250 (44.80%), Postives = 145/250 (58.00%), Query Frame = 0


Query: 34  RKIRPQKEQALNCPRCNSSNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGS 93
           RK RPQ++  +NCPRCNS+NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG S
Sbjct: 66  RKARPQEK--VNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSS 125

Query: 94  RKNKRPSSSSTTTSSNSSSSTLSTSPTCSNLPPKNP--LHLPQTPKTTPSQDLN-LSFP- 153
           RKNKR             SST   SP+   LP  NP  L   Q P  + ++DLN LSFP 
Sbjct: 126 RKNKR-------------SSTPLASPSNPKLPDLNPPILFSSQIPNKS-NKDLNLLSFPV 185

Query: 154 -SSNQLSAMELLTGMATNSKGLNCFIPMPSIVPDPASVYASGFPDLHD--QFKPSLGFSL 213
              +   A+ELL     +S+G+N F+P   +  +     + GFP + D  Q   +L FS+
Sbjct: 186 MQDHHHHALELLRSNGVSSRGMNTFLPGQMMDSNSVLYSSLGFPTMPDYKQSNNNLSFSI 245

Query: 214 DGYGVVPGEASN------------GGGGRVMQLPFEDLKQGANGVEEGKEHGDSSGYWSG 262
           D +  +     N             G  RV+  PF D+K+ ++  +E K HG+++ YW+G
Sbjct: 246 DHHQGIGHNTINSNQRAQDNNDDMNGASRVL-FPFSDMKELSSTTQE-KSHGNNT-YWNG 296

[Close]

BLAST of Carg08541 vs. ExPASy TrEMBL
Match: A0A6J1H2K6 (dof zinc finger protein DOF4.6-like OS=Cucurbita moschata OX=3662 GN=LOC111459124 PE=4 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 1.8e-142
Identity = 259/262 (98.85%), Postives = 259/262 (98.85%), Query Frame = 0


Query: 1   MDTAQWPQEIVLKPNEEIVANTCPKPSGVSVVERKIRPQKEQALNCPRCNSSNTKFCYYN 60
           MDTAQWPQEIVLKPNEEIVANTCPK SGVS VERKIRPQKEQALNCPRCNSSNTKFCYYN
Sbjct: 1   MDTAQWPQEIVLKPNEEIVANTCPKASGVSGVERKIRPQKEQALNCPRCNSSNTKFCYYN 60

Query: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTTTSSN-SSSSTLSTSP 120
           NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTTTSSN SSSSTLSTSP
Sbjct: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTTTSSNSSSSSTLSTSP 120

Query: 121 TCSNLPPKNPLHLPQTPKTTPSQDLNLSFPSSNQLSAMELLTGMATNSKGLNCFIPMPSI 180
           TCSNLPPKNPLHLPQTPKTTPSQDLNLSFPSSNQLSAMELLTGMATNSKGLNCFIPMPSI
Sbjct: 121 TCSNLPPKNPLHLPQTPKTTPSQDLNLSFPSSNQLSAMELLTGMATNSKGLNCFIPMPSI 180

Query: 181 VPDPASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEASNGGGGRVMQLPFEDLKQGANGV 240
           VPDPASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEASNGGGGRVMQLPFEDLKQGANGV
Sbjct: 181 VPDPASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEASNGGGGRVMQLPFEDLKQGANGV 240

Query: 241 EEGKEHGDSSGYWSGMLGGGSW 262
           EEGKEHGDSSGYWSGMLGGGSW
Sbjct: 241 EEGKEHGDSSGYWSGMLGGGSW 262

[Close]

BLAST of Carg08541 vs. ExPASy TrEMBL
Match: A0A6J1K6A1 (dof zinc finger protein DOF4.6-like OS=Cucurbita maxima OX=3661 GN=LOC111491539 PE=4 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 6.5e-140
Identity = 251/261 (96.17%), Postives = 258/261 (98.85%), Query Frame = 0


Query: 1   MDTAQWPQEIVLKPNEEIVANTCPKPSGVSVVERKIRPQKEQALNCPRCNSSNTKFCYYN 60
           MDTAQWPQEI LKPNEEIVANTCPKPSGVSV+ERKIRPQKEQALNCPRCNS+NTKFCYYN
Sbjct: 1   MDTAQWPQEIALKPNEEIVANTCPKPSGVSVLERKIRPQKEQALNCPRCNSTNTKFCYYN 60

Query: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTTTSSNSSSSTLSTSPT 120
           NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSS T+S++SSSSTLSTSPT
Sbjct: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSS-TSSNSSSSSTLSTSPT 120

Query: 121 CSNLPPKNPLHLPQTPKTTPSQDLNLSFPSSNQLSAMELLTGMATNSKGLNCFIPMPSIV 180
           CSNLPPK PLHLPQTPKTTPSQDLNLSFPSSNQLSAMELLTGMA+NSKGLNCFIPMPSI+
Sbjct: 121 CSNLPPKKPLHLPQTPKTTPSQDLNLSFPSSNQLSAMELLTGMASNSKGLNCFIPMPSII 180

Query: 181 PDPASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEASNGGGGRVMQLPFEDLKQGANGVE 240
           PDPASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEASNGGGGRVMQLPFEDLKQGANGVE
Sbjct: 181 PDPASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEASNGGGGRVMQLPFEDLKQGANGVE 240

Query: 241 EGKEHGDSSGYWSGMLGGGSW 262
           EGKEHGDSSGYWSGMLGGGSW
Sbjct: 241 EGKEHGDSSGYWSGMLGGGSW 260

[Close]

BLAST of Carg08541 vs. ExPASy TrEMBL
Match: A0A6J1DTX7 (dof zinc finger protein DOF4.6 OS=Momordica charantia OX=3673 GN=LOC111023092 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.7e-100
Identity = 211/297 (71.04%), Postives = 230/297 (77.44%), Query Frame = 0


Query: 1   MDTAQWPQEIVLKPNEEIVANTCPKPSGVSVVERKIRPQKEQALNCPRCNSSNTKFCYYN 60
           MDTAQWPQEIV+KP EEIVANTCPKP GVSV+ERKIRP KEQALNCPRCNS+NTKFCYYN
Sbjct: 1   MDTAQWPQEIVVKPIEEIVANTCPKP-GVSVLERKIRPHKEQALNCPRCNSTNTKFCYYN 60

Query: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTTTSSNSSSSTLSTSPT 120
           NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSS+T SS++S+ TL     
Sbjct: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSSTISSSNSAPTLPNK-- 120

Query: 121 CSNLPPKNPLHLPQTPKTTPSQDLNLSFPSSN---------------------------- 180
             +LP +NP      P     QDLNL+FPSS+                            
Sbjct: 121 IPDLPHQNPKSTTLNP-----QDLNLAFPSSSHHHQQDHFSSSNNNLSEIVVSGNPPIGA 180

Query: 181 ------QLSAMELLTGMATNSKGLNCFIPMPSIVPDPASVYASGFPDLHDQFKPSLGFSL 240
                 QLSAMELLTGMA NS+GLNCF+PMP  VPDPASVY +GFPDLHDQFKPSLGFSL
Sbjct: 181 PPSSSQQLSAMELLTGMA-NSRGLNCFMPMP--VPDPASVYTAGFPDLHDQFKPSLGFSL 240

Query: 241 DGYGVVPGEASNGGGGRVMQLPFEDLKQGAN-GVEEGK-EHGDSSGYWSGMLGGGSW 262
           DGYGVVP EASN GGGR++QLPFEDLKQG+N GVEEGK + GDSSGYW+GMLGGGSW
Sbjct: 241 DGYGVVPAEASN-GGGRLLQLPFEDLKQGSNGGVEEGKGQQGDSSGYWTGMLGGGSW 285

[Close]

BLAST of Carg08541 vs. ExPASy TrEMBL
Match: A0A1S3AUK1 (dof zinc finger protein DOF4.6-like OS=Cucumis melo OX=3656 GN=LOC103482848 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 9.5e-99
Identity = 216/322 (67.08%), Postives = 229/322 (71.12%), Query Frame = 0


Query: 1   MDTAQWPQEIVLKPNEEIVANTCPKPSGVSVVERKIRPQKEQALNCPRCNSSNTKFCYYN 60
           MDTAQWPQEIV+KP EEIV NTCPKPS VS++ERKIRPQKEQALNCPRCNSSNTKFCYYN
Sbjct: 1   MDTAQWPQEIVVKPIEEIVTNTCPKPS-VSILERKIRPQKEQALNCPRCNSSNTKFCYYN 60

Query: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTTTSSNSSSSTLSTSPT 120
           NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSS    SSNSSSST  T PT
Sbjct: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSS----SSNSSSSTSPTQPT 120

Query: 121 CSNLP--PKNPL--HLPQTPKTTPSQDLNLSFPSSN------------------------ 180
            S+ P  PK  L   LPQ PK TPSQDLNL FP SN                        
Sbjct: 121 SSSQPNFPKKILDHQLPQNPKITPSQDLNLFFPPSNNQDHHHFTTSNNNLSEMILVGSNP 180

Query: 181 -----------------------QLSAMELLTGMATN-----SKGLNCFIPMPS-IVPDP 240
                                  Q S MELLTGMA N     S+GLNCF+PM S +VPDP
Sbjct: 181 SINNNATSSSASATTTMSSPPPSQPSVMELLTGMANNNNNNSSRGLNCFVPMSSVVVPDP 240

Query: 241 ASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEASNGGGGRVMQLPFEDLKQGANGV-EEG 262
           +SVY  GFPDL DQFKPSLGFSLDGYGVV  EA N G GR+MQLPFEDLKQG+NGV ++G
Sbjct: 241 SSVYTGGFPDLQDQFKPSLGFSLDGYGVVSTEAGN-GAGRLMQLPFEDLKQGSNGVDQQG 300

[Close]

BLAST of Carg08541 vs. ExPASy TrEMBL
Match: A0A0A0KK04 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G148660 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.3e-95
Identity = 209/318 (65.72%), Postives = 226/318 (71.07%), Query Frame = 0


Query: 1   MDTAQWPQEIVLKPNEEIVANTCPKPSGVSVVERKIRPQKEQALNCPRCNSSNTKFCYYN 60
           MDTAQWPQEIV+KP EEIV NTCPKPS VS++ERKIRPQKEQALNCPRCNSSNTKFCYYN
Sbjct: 1   MDTAQWPQEIVVKPIEEIVTNTCPKPS-VSILERKIRPQKEQALNCPRCNSSNTKFCYYN 60

Query: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTTTSSNSSSSTLSTSPT 120
           NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSS+S  +SS S +   S+S +
Sbjct: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSNS--SSSTSPTPPNSSSQS 120

Query: 121 CSNLPPKNPLH-LPQTPKTTPSQDLNLSFPSSN--------------------------- 180
             N P K   H LPQ PK TPSQDLNL FP SN                           
Sbjct: 121 QPNFPKKILDHQLPQNPKITPSQDLNLFFPPSNNQDHHRFTTTNNNLSEMILVGSNPSIN 180

Query: 181 -------------------QLSAMELLTGMATN-----SKGLNCFIPMPS-IVPDPASVY 240
                              Q S MELLTGMA N     S+GLNCF+PM S +VPDP+SVY
Sbjct: 181 NATSSSASATTTMSSPPPSQPSVMELLTGMANNNNNNSSRGLNCFVPMSSVVVPDPSSVY 240

Query: 241 ASGFPDLHDQFKPSLGFSLDGYGVVPGEASNGGGGRVMQLPFEDLKQGANGVEEGK-EHG 262
             GFPDLHDQFKPSLGFSLDGYGVV  EA N G GR+MQLPFEDLKQ +NGVE+GK + G
Sbjct: 241 TGGFPDLHDQFKPSLGFSLDGYGVVSTEAGN-GAGRLMQLPFEDLKQVSNGVEQGKDQQG 300

[Close]

BLAST of Carg08541 vs. TAIR 10
Match: AT4G24060.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 199.9 bits (507), Expect = 2.5e-51
Identity = 151/348 (43.39%), Postives = 175/348 (50.29%), Query Frame = 0


Query: 1   MDTAQWPQEIVLKPNEEIVANTCPKPSGVSVV---------ERKIRPQKEQALNCPRCNS 60
           MDTAQWPQEIV+KP EEIV NTCPKP    +          ERK RP+K+QA+NCPRCNS
Sbjct: 1   MDTAQWPQEIVVKPLEEIVTNTCPKPQPQPLQPQQPPSVGGERKARPEKDQAVNCPRCNS 60

Query: 61  SNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTTTSSNSS 120
           +NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRNIPVGGGSRKNKR  SSS+  S+N S
Sbjct: 61  TNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKRSHSSSSDISNNHS 120

Query: 121 SSTLSTSPTCSNLPPKNPLHL---------PQTPK--TTPSQDLNLSFP----------- 180
               ST P        +  HL          Q PK   T  QDLNL F            
Sbjct: 121 D---STQPATKKHLSDHHHHLMSMSQQGLTGQNPKFLETTQQDLNLGFSPHGMIRTNFTD 180

Query: 181 ------------------------SSNQLSAMELLTGMATNSKGLN-CFIPMPSIVPDPA 240
                                   S+   S+++L+   + N    N  F+  P    DPA
Sbjct: 181 LIHNIGNNTNKSNNNNNPLIVSSCSAMATSSLDLIRNNSNNGNSSNSSFMGFPVHNQDPA 240

Query: 241 SVYASGFPDLHDQFKPS------LGFSLDGY-------GVVPGEASNGGGGRV---MQLP 262
           S    GF  + D +KP       LGFSLD +       G   GE    GG  V      P
Sbjct: 241 S---GGF-SMQDHYKPCNTNTTLLGFSLDHHHNNGFHGGFQGGEEGGEGGDDVNGRHLFP 300

[Close]

BLAST of Carg08541 vs. TAIR 10
Match: AT1G64620.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 193.0 bits (489), Expect = 3.1e-49
Identity = 153/355 (43.10%), Postives = 188/355 (52.96%), Query Frame = 0


Query: 1   MDTAQWPQEIVLKPNEEIVANTCPK-----PSGVSVVERKIRPQKEQALNCPRCNSSNTK 60
           MDTA+WPQE V+KP  EIV NTC K     PS  + VERK RP+K+QALNCPRCNS NTK
Sbjct: 1   MDTAKWPQEFVVKPMNEIVTNTCLKQQSNPPSPATPVERKARPEKDQALNCPRCNSLNTK 60

Query: 61  FCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTTTSSNSSSSTL 120
           FCYYNNYSLTQPRYFCK CRRYWT GGSLRNIPVGGG RKNKR SS+S+++S +SSSS+ 
Sbjct: 61  FCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGGVRKNKRSSSNSSSSSPSSSSSSK 120

Query: 121 STSPTCSNLPPKNPLHL-PQTPKTTPS-----------------QDLNLSF--------- 180
                 +N P     HL P+  +   +                 +DLNL+F         
Sbjct: 121 KPLFANNNTPTPPLPHLNPKIGEAAATKVQDLTFSQGFGNAHEVKDLNLAFSQGFGIGHN 180

Query: 181 ------------PSSNQ--------LSAMELLTGMATNSKGLN---CFIPMPSIVPDPAS 240
                       PSS+          S++ELL G++++S   N    F+  P++    +S
Sbjct: 181 HHSSIPEFLQVVPSSSMKNNPLVSTSSSLELL-GISSSSASSNSRPAFMSYPNV--HDSS 240

Query: 241 VY-ASGF----PDLHDQFKPSLGFSLDGYGVVPGEASNGG--GGRVMQLPFEDL------ 262
           VY ASGF    P   +  +P+LGFSLDG   +  E  + G   GR + LPFE L      
Sbjct: 241 VYTASGFGLSYPQFQEFMRPALGFSLDGGDPLRQEEGSSGTNNGRPL-LPFESLLKLPVS 300

[Close]

BLAST of Carg08541 vs. TAIR 10
Match: AT3G61850.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 161.8 bits (408), Expect = 7.6e-40
Identity = 112/250 (44.80%), Postives = 145/250 (58.00%), Query Frame = 0


Query: 34  RKIRPQKEQALNCPRCNSSNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGS 93
           RK RPQ++  +NCPRCNS+NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG S
Sbjct: 66  RKARPQEK--VNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSS 125

Query: 94  RKNKRPSSSSTTTSSNSSSSTLSTSPTCSNLPPKNP--LHLPQTPKTTPSQDLN-LSFP- 153
           RKNKR             SST   SP+   LP  NP  L   Q P  + ++DLN LSFP 
Sbjct: 126 RKNKR-------------SSTPLASPSNPKLPDLNPPILFSSQIPNKS-NKDLNLLSFPV 185

Query: 154 -SSNQLSAMELLTGMATNSKGLNCFIPMPSIVPDPASVYASGFPDLHD--QFKPSLGFSL 213
              +   A+ELL     +S+G+N F+P   +  +     + GFP + D  Q   +L FS+
Sbjct: 186 MQDHHHHALELLRSNGVSSRGMNTFLPGQMMDSNSVLYSSLGFPTMPDYKQSNNNLSFSI 245

Query: 214 DGYGVVPGEASN------------GGGGRVMQLPFEDLKQGANGVEEGKEHGDSSGYWSG 262
           D +  +     N             G  RV+  PF D+K+ ++  +E K HG+++ YW+G
Sbjct: 246 DHHQGIGHNTINSNQRAQDNNDDMNGASRVL-FPFSDMKELSSTTQE-KSHGNNT-YWNG 296

[Close]

BLAST of Carg08541 vs. TAIR 10
Match: AT3G61850.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 161.8 bits (408), Expect = 7.6e-40
Identity = 112/250 (44.80%), Postives = 145/250 (58.00%), Query Frame = 0


Query: 34  RKIRPQKEQALNCPRCNSSNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGS 93
           RK RPQ++  +NCPRCNS+NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG S
Sbjct: 54  RKARPQEK--VNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSS 113

Query: 94  RKNKRPSSSSTTTSSNSSSSTLSTSPTCSNLPPKNP--LHLPQTPKTTPSQDLN-LSFP- 153
           RKNKR             SST   SP+   LP  NP  L   Q P  + ++DLN LSFP 
Sbjct: 114 RKNKR-------------SSTPLASPSNPKLPDLNPPILFSSQIPNKS-NKDLNLLSFPV 173

Query: 154 -SSNQLSAMELLTGMATNSKGLNCFIPMPSIVPDPASVYASGFPDLHD--QFKPSLGFSL 213
              +   A+ELL     +S+G+N F+P   +  +     + GFP + D  Q   +L FS+
Sbjct: 174 MQDHHHHALELLRSNGVSSRGMNTFLPGQMMDSNSVLYSSLGFPTMPDYKQSNNNLSFSI 233

Query: 214 DGYGVVPGEASN------------GGGGRVMQLPFEDLKQGANGVEEGKEHGDSSGYWSG 262
           D +  +     N             G  RV+  PF D+K+ ++  +E K HG+++ YW+G
Sbjct: 234 DHHQGIGHNTINSNQRAQDNNDDMNGASRVL-FPFSDMKELSSTTQE-KSHGNNT-YWNG 284

[Close]

BLAST of Carg08541 vs. TAIR 10
Match: AT3G61850.3 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 161.8 bits (408), Expect = 7.6e-40
Identity = 112/250 (44.80%), Postives = 145/250 (58.00%), Query Frame = 0


Query: 34  RKIRPQKEQALNCPRCNSSNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGS 93
           RK RPQ++  +NCPRCNS+NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG S
Sbjct: 54  RKARPQEK--VNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSS 113

Query: 94  RKNKRPSSSSTTTSSNSSSSTLSTSPTCSNLPPKNP--LHLPQTPKTTPSQDLN-LSFP- 153
           RKNKR             SST   SP+   LP  NP  L   Q P  + ++DLN LSFP 
Sbjct: 114 RKNKR-------------SSTPLASPSNPKLPDLNPPILFSSQIPNKS-NKDLNLLSFPV 173

Query: 154 -SSNQLSAMELLTGMATNSKGLNCFIPMPSIVPDPASVYASGFPDLHD--QFKPSLGFSL 213
              +   A+ELL     +S+G+N F+P   +  +     + GFP + D  Q   +L FS+
Sbjct: 174 MQDHHHHALELLRSNGVSSRGMNTFLPGQMMDSNSVLYSSLGFPTMPDYKQSNNNLSFSI 233

Query: 214 DGYGVVPGEASN------------GGGGRVMQLPFEDLKQGANGVEEGKEHGDSSGYWSG 262
           D +  +     N             G  RV+  PF D+K+ ++  +E K HG+++ YW+G
Sbjct: 234 DHHQGIGHNTINSNQRAQDNNDDMNGASRVL-FPFSDMKELSSTTQE-KSHGNNT-YWNG 284

The following BLAST results are available for this feature:

BLAST of Carg08541 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605597.1	2.8e-145	100.00	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG703...	[more]
XP_022957649.1	3.8e-142	98.85	dof zinc finger protein DOF4.6-like [Cucurbita moschata]	[more]
XP_022996260.1	1.3e-139	96.17	dof zinc finger protein DOF4.6-like [Cucurbita maxima]	[more]
XP_023534480.1	2.3e-139	96.98	dof zinc finger protein DOF4.6-like [Cucurbita pepo subsp. pepo]	[more]
XP_022156136.1	3.6e-100	71.04	dof zinc finger protein DOF4.6 [Momordica charantia]	[more]

BLAST of Carg08541 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LAP8	3.5e-50	43.39	Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV...	[more]
Q84JQ8	4.3e-48	43.10	Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV...	[more]
Q9SXG8	3.3e-40	40.00	Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 ...	[more]
B9F1L8	4.8e-39	35.60	Dof zinc finger protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF2 PE=2 ...	[more]
Q43385	1.1e-38	44.80	Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV...	[more]

BLAST of Carg08541 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H2K6	1.8e-142	98.85	dof zinc finger protein DOF4.6-like OS=Cucurbita moschata OX=3662 GN=LOC11145912...	[more]
A0A6J1K6A1	6.5e-140	96.17	dof zinc finger protein DOF4.6-like OS=Cucurbita maxima OX=3661 GN=LOC111491539 ...	[more]
A0A6J1DTX7	1.7e-100	71.04	dof zinc finger protein DOF4.6 OS=Momordica charantia OX=3673 GN=LOC111023092 PE...	[more]
A0A1S3AUK1	9.5e-99	67.08	dof zinc finger protein DOF4.6-like OS=Cucumis melo OX=3656 GN=LOC103482848 PE=4...	[more]
A0A0A0KK04	1.3e-95	65.72	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G148660 PE...	[more]

BLAST of Carg08541 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24060.1	2.5e-51	43.39	Dof-type zinc finger DNA-binding family protein	[more]
AT1G64620.1	3.1e-49	43.10	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.1	7.6e-40	44.80	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.2	7.6e-40	44.80	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.3	7.6e-40	44.80	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 42..98 e-value: 4.0E-33 score: 113.4
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 46..82
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 44..98 score: 29.096235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..261
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..148
None	No IPR available	PANTHER	PTHR31992:SF124	DOF ZINC FINGER PROTEIN DOF1.8	coord: 14..257
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 14..257

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08541-RA	Carg08541-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding