Carg08513 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08513
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Tumor necrosis factor receptor family protein
Location	Carg_Chr02: 5249175 .. 5252590 (-)
RNA-Seq Expression	Carg08513
Synteny	Carg08513

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTAAAGAAAAACCCTGCGTGTCTAATTCTGTTCGTTCGTCGTCGACTCTCTTCGAATCTCAGTGCCTTGGCGGCAGCGGGATACCAGTGCAACAGCGCGCAGTTGTAGCCATAGACGAATAGTGGGAGAATTTTGTACCACGAAGTAGTGCGGTAGACTAGCATCAGATATGTGGTGGCTTCGCGGTATTCAAACAATTAGAAATGCAGATGGAGGTGGAGGTTCTGCTGGCCTTGTTTTCAGCACATTCGCGAGGTATTTCTCGAGGTCGCGAGCAGAGAATCTTAGGAAAATCAATCCCAAGTTGACCCCTCAGGAGGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTCGTCAAGCAGCATGGACCGCTCACAGTTTCCAATGCTTGGATTAAAGCTCAGGTAGGTTTTCTTCACCTTCTGTTACATTTCATCGCTTATTTTCTTTCATTTCGAAGTTGGATGATGGTTATCGAAACTGCAGCTTTGGACCGCTCAAAGTTGCTTGATCTAGGTTAGCTCTGCAGCCACATTAGTTAAAGCCTGATATTGAGTCTCAATCTGAATGGGGATATGCTTTTGAGTTGAAGTGACCTGTCTTTTAGATGAATGTTCATTCACTTATTGAAGAATGCTTACCAAGTCATTCGGCTGGAGCATATAGATTACTTCATTCAAAACGTCATTAAGAAACGAATTACTAATATCTAGCTACCCAAATTAGCGACCATTTTTCAAAGCAATACTAATTATTAGTAAGGCAAATGAGAAGCTTTTGAGTATTTTTGACGAAACTCTTCTGCAACAAATAAGCTTTGTTCCCTTGAACACTTACTACCGCATGTAGTTTTATATTGAACACCCGTTTGTTGCTGTTTCCTAGAGATGCTCAGGAGGAGCAGTGGCGAGTGAAGTGGGTTAGAATGAGTAGCCCAGCGGGACCAACCATCTTGGATTGGCTCCATAAAAAATAGGTACCTTCAGCATGTGTCAATGGTACTGTCCCAAGTGTGCTTGTTGTCCTATTGACACCCCTCTGCTCACACCACCTTCCTTTACTCTCTGTAATGTATTCTTCCATTGGCACTTTTCCATAAGCCTCCTTGGTCTTCTCTTCTAGGATAGATACTTCCTATTTCCAAATTCCCTTTAGTTTCGTAATCATCTTTGTCACCACGTTAAACTCCTCCTTGATATGAACAAGTTTCATCTCAATGGTACTCTATAACTCTTATGATATTCCCTTCCACGACATCTAGATCTAGTCTTGTCTTCATTTTCTTTCATTAGTAAGCATTTCCTAGAACCACACTAATCTAGCACTACTTGTGGTTAACACCTAGAAGGGTATTTTCCTCCCAAAAGGACATCATATATGGACTCTTTTCTGCCAAGTTAATTAGTTCAAGAACACCATCAAGTACATCATGCATCCAACTTGCTAGTTTTCGTTCAATTTCTTTCTGTGCTATGTATGCATAGTAGTGGCCTATCGAAACCTTTGAAAGAGTGGAAGTATTCCCTTCAATCAAATTGAAGACATTTCAATAACGTACCAAAAGGATCTTTACTGGAGCTTTGAACTTCTTGAATATGGCGAAAGCTTTAGACTTGACTCTGACAGGATAGGCCCAGGTAAATTACCAAAGTCACAAAGCAAACGAATTAAAAAATTATAGCCTTCTTTGAAAGGGATGTGTGTAGGTCCTCAGATATCAATATGCACTATTTCGAGAGGATAAGTGGTGTATGAGAAAGAGGGAGATAAGGTTGTATTGCAGTAAGTGAAAACTTCAGACTTGACTGTGTGGGGAAAGATGTAGGTAAATGTAGCTAAGTCATCAAGGAAATGAATGAAAGACTTAATAGCTTCCTCAGAAGGAGATATGAGATAAGCGCTGGCCGCCAAATATCAGTACACTCAATTTCAAGAGGATAAGTGGACGAGTGAAACGGAGGTGAGGCAGTGTATGACACTTCCCTTCTTTTGTCAGGCATGACATGAAACAGTATCTCCTTTAACTGAACAATCAAGAAACAAGGTCATGGCTTTCAAGAAACAAGGTCATGGCTTTCTTAATTACTCTGAAAGTCGTGTCCCAATTGTAACTGTAAGTGCCGCGAGTAAAATTGGATATATTCAAAGACAAACCAACAACTAATATCAACAATAGAAGTGTAACAAGCTCAAGTCCACCGGTAGTAGATATTGTCCGCTTTGTCCCGTTATGTATTGCCGTCAGCCTCACGGTTCTAAAACACGTCTGTTAGGGAGAGGTTTCTACACCCTTATAAAGAATGCTTCGTTTCCCTCCCCAACGGATGTGGGATCTCACAATCCACCCGCCTTCGAGGCCCAGCGTCCTCGTTGGCAATTGTTCGGTGGCTAGCTCTGAAACCTTTTGTAATAGTCCAAACCCACTGCTAGTAGATATTGTCCGCTTTGGCCCATTACGTATCGCCGTCAGCTTCACGGTTTTAAAACATGTCCACTAGGGAGAGGTTTCCACACTCTTAGAGGCCCAGCATTAGAGTTAGACAGCGGTTGGTGTGCCAACGAGAGATACAAATTTCACACGAGAGTGAAAAAAGTACAAAACGGATAATTAAAAAAATTACTTAAACATGCCCCAACGTCGAACAAAGAACATAGTTGTTGTGTATAAAAAGTTCCAATAGAATTCTTACTTTTGAAATTGGATCATTTGGAATATATCTTATAGAAGCCAATGATGACTTAATCCATCATGTCTGTGACATGGGAAGGCCGTAGGAATATTTATTACATGTAGAAATTGTGCACTCAGCCCTCGTGAAAAGCAGTGAATTGAATTGAATTTTATGGCCCTTCTATCTAATACTGCTTTTCATATCAGGAATCTGGCGTGGGTGGATTGAACAGCAAAACACACATGAAGCTGTTGCTGAAATGGATGAGGGGAAGGAAGATGCTGCAGCTTTTCTGCAACCAAGTTGGTTCGAACAAGAAATTTCTGCTCGCCACGCCCAATGATCCTCGAGTAGAAGAGTTGAAGAGTGCTTCAGAACCAGTAGTCCAGAGACGAAAGAAACAGAAGGCACAAATAAGGAGGAGAAAGGCATCAAAATAAACTTTTGCCAACGTCCACGAGTTTACGATGCAGTCGATGGGACTGCCCTCGGACTTGTTAGTACTGATGGCGCGCTCACGACTTATGACGATGAATTTATGAGTTTCTGCCATCACCGTTTTCCCCCAAATTTCAACTCTTTTGGGTGTTATGCAAGGTTTCTTTTGAACATTTCACGTTGACTTGGTTTCCATGCATCGACTGACAAACATGCATTTGAATCGTGGTTGATAAAACAGCATGGATTAGGATGTCTCATTGGATTAAACAATTTAAGTCAGAATAAAAATCTTGAATTTTT

mRNA sequence

ATGAGTAAAGAAAAACCCTGCGTGTCTAATTCTGTTCGTTCGTCGTCGACTCTCTTCGAATCTCAGTGCCTTGGCGGCAGCGGGATACCAGTGCAACAGCGCGCAGTTGTAGCCATAGACGAATAGTGGGAGAATTTTGTACCACGAAGTAGTGCGGTAGACTAGCATCAGATATGTGGTGGCTTCGCGGTATTCAAACAATTAGAAATGCAGATGGAGGTGGAGGTTCTGCTGGCCTTGTTTTCAGCACATTCGCGAGGTATTTCTCGAGGTCGCGAGCAGAGAATCTTAGGAAAATCAATCCCAAGTTGACCCCTCAGGAGGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTCGTCAAGCAGCATGGACCGCTCACAGTTTCCAATGCTTGGATTAAAGCTCAGGAATCTGGCGTGGGTGGATTGAACAGCAAAACACACATGAAGCTGTTGCTGAAATGGATGAGGGGAAGGAAGATGCTGCAGCTTTTCTGCAACCAAGTTGGTTCGAACAAGAAATTTCTGCTCGCCACGCCCAATGATCCTCGAGTAGAAGAGTTGAAGAGTGCTTCAGAACCAGTAGTCCAGAGACGAAAGAAACAGAAGGCACAAATAAGGAGGAGAAAGGCATCAAAATAAACTTTTGCCAACGTCCACGAGTTTACGATGCAGTCGATGGGACTGCCCTCGGACTTGTTAGTACTGATGGCGCGCTCACGACTTATGACGATGAATTTATGAGTTTCTGCCATCACCGTTTTCCCCCAAATTTCAACTCTTTTGGGTGTTATGCAAGGTTTCTTTTGAACATTTCACGTTGACTTGGTTTCCATGCATCGACTGACAAACATGCATTTGAATCGTGGTTGATAAAACAGCATGGATTAGGATGTCTCATTGGATTAAACAATTTAAGTCAGAATAAAAATCTTGAATTTTT

Coding sequence (CDS)

ATGTGGTGGCTTCGCGGTATTCAAACAATTAGAAATGCAGATGGAGGTGGAGGTTCTGCTGGCCTTGTTTTCAGCACATTCGCGAGGTATTTCTCGAGGTCGCGAGCAGAGAATCTTAGGAAAATCAATCCCAAGTTGACCCCTCAGGAGGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTCGTCAAGCAGCATGGACCGCTCACAGTTTCCAATGCTTGGATTAAAGCTCAGGAATCTGGCGTGGGTGGATTGAACAGCAAAACACACATGAAGCTGTTGCTGAAATGGATGAGGGGAAGGAAGATGCTGCAGCTTTTCTGCAACCAAGTTGGTTCGAACAAGAAATTTCTGCTCGCCACGCCCAATGATCCTCGAGTAGAAGAGTTGAAGAGTGCTTCAGAACCAGTAGTCCAGAGACGAAAGAAACAGAAGGCACAAATAAGGAGGAGAAAGGCATCAAAATAA

Protein sequence

MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLATPNDPRVEELKSASEPVVQRRKKQKAQIRRRKASK

Homology

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BLAST of Carg08513 vs. NCBI nr
Match: KAG7035535.1 (hypothetical protein SDJN02_02332 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 305.8 bits (782), Expect = 2.1e-79
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYG 60
           MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYG
Sbjct: 1   MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYG 60

Query: 61  VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA 120
           VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA
Sbjct: 61  VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA 120

Query: 121 TPNDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 156
           TPNDPRVEELKSASEPVVQRRKKQKAQIRRRKASK
Sbjct: 121 TPNDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 155

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BLAST of Carg08513 vs. NCBI nr
Match: KAG6605625.1 (hypothetical protein SDJN03_02942, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 302.4 bits (773), Expect = 2.3e-78
Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYG 60
           MWWLRGIQTIRNADGGGGSAGLVFSTFAR FSRSRAENLRKINPKLTPQEASLVAQDLYG
Sbjct: 1   MWWLRGIQTIRNADGGGGSAGLVFSTFARCFSRSRAENLRKINPKLTPQEASLVAQDLYG 60

Query: 61  VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA 120
           VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA
Sbjct: 61  VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA 120

Query: 121 TPNDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 156
           TPNDPRVEELKSASEPVVQRRKKQKAQIRRRKASK
Sbjct: 121 TPNDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 155

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BLAST of Carg08513 vs. NCBI nr
Match: XP_022996189.1 (uncharacterized protein LOC111491495 [Cucurbita maxima])

HSP 1 Score: 301.6 bits (771), Expect = 3.9e-78
Identity = 152/155 (98.06%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYG 60
           MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYG
Sbjct: 1   MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYG 60

Query: 61  VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA 120
           VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA
Sbjct: 61  VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA 120

Query: 121 TPNDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 156
           TPNDPR EELKSASEPVVQRRKKQKA+IRR+KASK
Sbjct: 121 TPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK 155

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BLAST of Carg08513 vs. NCBI nr
Match: XP_022958708.1 (uncharacterized protein LOC111459852 [Cucurbita moschata])

HSP 1 Score: 300.8 bits (769), Expect = 6.7e-78
Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYG 60
           MWWLRGIQTIRNADGGGGSAGLVFSTF RYFSRSRAENLRKINPKLTPQEASLVAQDLYG
Sbjct: 1   MWWLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYG 60

Query: 61  VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA 120
           VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA
Sbjct: 61  VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA 120

Query: 121 TPNDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 156
           TP+DPR EELKSASEPVVQRRKKQKAQIRRRKASK
Sbjct: 121 TPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK 155

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BLAST of Carg08513 vs. NCBI nr
Match: XP_023534502.1 (uncharacterized protein LOC111796041 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 293.9 bits (751), Expect = 8.2e-76
Identity = 151/157 (96.18%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MWWLRGIQTIRNAD--GGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDL 60
           MWWLRGIQTIRNAD  GGGGSAGLVFSTFARYFSRSRAENLRKINPKLTP EASLVAQDL
Sbjct: 1   MWWLRGIQTIRNADGGGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPHEASLVAQDL 60

Query: 61  YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL 120
           YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL
Sbjct: 61  YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL 120

Query: 121 LATPNDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 156
           LATP+DPR EELKSASEPVVQRRKKQKAQIRRRK SK
Sbjct: 121 LATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKTSK 157

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BLAST of Carg08513 vs. ExPASy TrEMBL
Match: A0A6J1K817 (uncharacterized protein LOC111491495 OS=Cucurbita maxima OX=3661 GN=LOC111491495 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.9e-78
Identity = 152/155 (98.06%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYG 60
           MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYG
Sbjct: 1   MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYG 60

Query: 61  VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA 120
           VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA
Sbjct: 61  VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA 120

Query: 121 TPNDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 156
           TPNDPR EELKSASEPVVQRRKKQKA+IRR+KASK
Sbjct: 121 TPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK 155

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BLAST of Carg08513 vs. ExPASy TrEMBL
Match: A0A6J1H3U5 (uncharacterized protein LOC111459852 OS=Cucurbita moschata OX=3662 GN=LOC111459852 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.2e-78
Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYG 60
           MWWLRGIQTIRNADGGGGSAGLVFSTF RYFSRSRAENLRKINPKLTPQEASLVAQDLYG
Sbjct: 1   MWWLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYG 60

Query: 61  VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA 120
           VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA
Sbjct: 61  VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA 120

Query: 121 TPNDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 156
           TP+DPR EELKSASEPVVQRRKKQKAQIRRRKASK
Sbjct: 121 TPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK 155

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BLAST of Carg08513 vs. ExPASy TrEMBL
Match: A0A0A0KK52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146270 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.6e-61
Identity = 123/153 (80.39%), Postives = 135/153 (88.24%), Query Frame = 0


Query: 3   WLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVV 62
           W R IQ I NADGGGG AGLVF+TFAR+FSR RAENLRKINPKLTPQEASLVAQDLYGVV
Sbjct: 2   WFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVV 61

Query: 63  KQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLATP 122
           +QHGPLT+SNAWIKAQESGV GLNSKTHMKLLLKWMRGRKML LFC+ VGSNKKFLL TP
Sbjct: 62  QQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCTP 121

Query: 123 NDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 156
           +DPR EELK++SE   QR+K+ K+  +RRK SK
Sbjct: 122 DDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 154

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BLAST of Carg08513 vs. ExPASy TrEMBL
Match: A0A6J1E538 (uncharacterized protein LOC111026127 OS=Momordica charantia OX=3673 GN=LOC111026127 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.6e-61
Identity = 125/154 (81.17%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 3   WLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVV 62
           WLRG Q I +ADGGGGSAGLVFSTFARYFSR RAENLRKINPKLTPQEASLVAQDLYGVV
Sbjct: 2   WLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVV 61

Query: 63  KQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLAT- 122
           KQHGPL++SNAWIKAQE GV GLNSKTHMKL+LKWMRGRKML+L CNQVGSNKKFLL+T 
Sbjct: 62  KQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGRKMLKLLCNQVGSNKKFLLSTL 121

Query: 123 PNDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 156
           P+DP+ ++LKS+SE  VQR K+ K   RRRK SK
Sbjct: 122 PDDPQADQLKSSSELGVQREKRVKPPARRRKPSK 155

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BLAST of Carg08513 vs. ExPASy TrEMBL
Match: A0A1S3ATS9 (uncharacterized protein LOC103482888 OS=Cucumis melo OX=3656 GN=LOC103482888 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 8.8e-60
Identity = 120/153 (78.43%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 3   WLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVV 62
           W R IQ I N DGGGG  GLVF+TFAR+FSR RAENLRKINPKLTPQEASLVAQDLYGV+
Sbjct: 2   WFRSIQRIGNTDGGGGLPGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVI 61

Query: 63  KQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLATP 122
           +QHGPLTVSNAWIKAQESGV GLNSKTHMKLLLKWMRGR+ML LFC+ VGSNKKFLL TP
Sbjct: 62  QQHGPLTVSNAWIKAQESGVNGLNSKTHMKLLLKWMRGRRMLNLFCHYVGSNKKFLLCTP 121

Query: 123 NDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 156
           +DPR EELK+ SE   QR+K+ K+  +RRK SK
Sbjct: 122 DDPRAEELKNYSESGPQRKKRAKSPTKRRKTSK 154

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BLAST of Carg08513 vs. TAIR 10
Match: AT1G73940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49410.2); Has 54 Blast hits to 54 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 137.1 bits (344), Expect = 1.2e-32
Identity = 77/148 (52.03%), Postives = 96/148 (64.86%), Query Frame = 0


Query: 13  ADGGGG-----SAGLVF-------STFARYFSRSRAENLRKINPKLTPQEASLVAQDLYG 72
           A GGGG      A  +F       S   RY SR RA N+RKINPK+  QEA  ++  LY 
Sbjct: 4   AGGGGGLRKLCRASAIFDNEISYNSLLVRYMSRERAVNVRKINPKVPIQEAYAISNSLYD 63

Query: 73  VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL-L 132
           + K HGPL+V N W++AQE+GV GLNSKTHMKLLLKWMRG+KML+L CNQVGS+KKF   
Sbjct: 64  LFKLHGPLSVPNTWLRAQEAGVSGLNSKTHMKLLLKWMRGKKMLKLICNQVGSSKKFFHT 123

Query: 133 ATPNDPRVEELKSASEPVVQRRKKQKAQ 148
             P DP  E+  +  E   Q  KK++++
Sbjct: 124 VLPEDPLQEQPAAPIENKKQAVKKKRSK 151

[Close]

BLAST of Carg08513 vs. TAIR 10
Match: AT5G49410.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G73940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 87.8 bits (216), Expect = 8.3e-18
Identity = 36/99 (36.36%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 23  VFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGV 82
           V     R+F+      ++ I     P++   + + ++ ++K HGPLT++  W + +E G+
Sbjct: 16  VVGMLTRHFATKPKPKMKPIELNTPPEQTQTITRVIFDILKDHGPLTIAETWDRVKEVGL 75

Query: 83  GGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLAT 122
            GL SK HMK++L+WMR R+ L+L CN VG +K+FL  T
Sbjct: 76  RGLTSKRHMKIILRWMRERQKLKLICNHVGPHKQFLYTT 114

[Close]

BLAST of Carg08513 vs. TAIR 10
Match: AT5G49410.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G73940.1); Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 87.8 bits (216), Expect = 8.3e-18
Identity = 36/99 (36.36%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 23  VFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGV 82
           V     R+F+      ++ I     P++   + + ++ ++K HGPLT++  W + +E G+
Sbjct: 16  VVGMLTRHFATKPKPKMKPIELNTPPEQTQTITRVIFDILKDHGPLTIAETWDRVKEVGL 75

Query: 83  GGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLAT 122
            GL SK HMK++L+WMR R+ L+L CN VG +K+FL  T
Sbjct: 76  RGLTSKRHMKIILRWMRERQKLKLICNHVGPHKQFLYTT 114

The following BLAST results are available for this feature:

BLAST of Carg08513 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035535.1	2.1e-79	100.00	hypothetical protein SDJN02_02332 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6605625.1	2.3e-78	99.35	hypothetical protein SDJN03_02942, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022996189.1	3.9e-78	98.06	uncharacterized protein LOC111491495 [Cucurbita maxima]	[more]
XP_022958708.1	6.7e-78	98.06	uncharacterized protein LOC111459852 [Cucurbita moschata]	[more]
XP_023534502.1	8.2e-76	96.18	uncharacterized protein LOC111796041 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg08513 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg08513 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K817	1.9e-78	98.06	uncharacterized protein LOC111491495 OS=Cucurbita maxima OX=3661 GN=LOC111491495...	[more]
A0A6J1H3U5	3.2e-78	98.06	uncharacterized protein LOC111459852 OS=Cucurbita moschata OX=3662 GN=LOC1114598...	[more]
A0A0A0KK52	1.6e-61	80.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146270 PE=4 SV=1	[more]
A0A6J1E538	3.6e-61	81.17	uncharacterized protein LOC111026127 OS=Momordica charantia OX=3673 GN=LOC111026...	[more]
A0A1S3ATS9	8.8e-60	78.43	uncharacterized protein LOC103482888 OS=Cucumis melo OX=3656 GN=LOC103482888 PE=...	[more]

BLAST of Carg08513 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73940.1	1.2e-32	52.03	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G49410.1	8.3e-18	36.36	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G49410.2	8.3e-18	36.36	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..155
None	No IPR available	PANTHER	PTHR35110	EXPRESSED PROTEIN	coord: 7..148
None	No IPR available	PANTHER	PTHR35110:SF1	EXPRESSED PROTEIN	coord: 7..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08513-RA	Carg08513-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0008270	zinc ion binding