Carg08495 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08495
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ethylene-responsive transcription factor ERF106-like
Location	Carg_Chr02: 5381163 .. 5381708 (-)
RNA-Seq Expression	Carg08495
Synteny	Carg08495

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACTGCGAGAAGAAGACGATTTCTCACGATTGAAGCTCATCCAACGCCATCGTCTCCAAGATTCCGATTCCTTCCGCACTCTCCTGGATTTCGAGTTCCCGTTACCGTCCGCCTTCTTCTCTCTCCCGTCGATCAAATTCGAATTCGAAGATTTCGAGTTCATGAAACCGTCGGAAGAGGAAGAGCCTCCGATTCAGAAGCCGGAACAATCGGAGCGATCGAGCTCTCCAGAAGTGGCGATGGCGGAAGAGGTGTCGAGTTCCGACGGCGGGAGGAAGTACAGAGGTGTACGACGGCGGCCGTGGGGGAAGTTCGCGGCGGAGATTCGAGATCCGAGTAGAAAAGGGAGTAGGGTTTGGTTGGGGACTTTCAATTCGGATGTTGATGCGGCTAGGGCTTATGATTCGGCTGCGTTTAAAATGAGGGGAAGAAAGGCTAAGTTGAATTTTCCGTTGGATGCCGGGAAGTCTGAGCCGCCGCCGCCGCCGCCGCCGCCGCCAGGAAATGGGCGGAACAGGACAAGAGAGACGAAAGTAAATTAA

mRNA sequence

ATGGAACTGCGAGAAGAAGACGATTTCTCACGATTGAAGCTCATCCAACGCCATCGTCTCCAAGATTCCGATTCCTTCCGCACTCTCCTGGATTTCGAGTTCCCGTTACCGTCCGCCTTCTTCTCTCTCCCGTCGATCAAATTCGAATTCGAAGATTTCGAGTTCATGAAACCGTCGGAAGAGGAAGAGCCTCCGATTCAGAAGCCGGAACAATCGGAGCGATCGAGCTCTCCAGAAGTGGCGATGGCGGAAGAGGTGTCGAGTTCCGACGGCGGGAGGAAGTACAGAGGTGTACGACGGCGGCCGTGGGGGAAGTTCGCGGCGGAGATTCGAGATCCGAGTAGAAAAGGGAGTAGGGTTTGGTTGGGGACTTTCAATTCGGATGTTGATGCGGCTAGGGCTTATGATTCGGCTGCGTTTAAAATGAGGGGAAGAAAGGCTAAGTTGAATTTTCCGTTGGATGCCGGGAAGTCTGAGCCGCCGCCGCCGCCGCCGCCGCCGCCAGGAAATGGGCGGAACAGGACAAGAGAGACGAAAGTAAATTAA

Coding sequence (CDS)

ATGGAACTGCGAGAAGAAGACGATTTCTCACGATTGAAGCTCATCCAACGCCATCGTCTCCAAGATTCCGATTCCTTCCGCACTCTCCTGGATTTCGAGTTCCCGTTACCGTCCGCCTTCTTCTCTCTCCCGTCGATCAAATTCGAATTCGAAGATTTCGAGTTCATGAAACCGTCGGAAGAGGAAGAGCCTCCGATTCAGAAGCCGGAACAATCGGAGCGATCGAGCTCTCCAGAAGTGGCGATGGCGGAAGAGGTGTCGAGTTCCGACGGCGGGAGGAAGTACAGAGGTGTACGACGGCGGCCGTGGGGGAAGTTCGCGGCGGAGATTCGAGATCCGAGTAGAAAAGGGAGTAGGGTTTGGTTGGGGACTTTCAATTCGGATGTTGATGCGGCTAGGGCTTATGATTCGGCTGCGTTTAAAATGAGGGGAAGAAAGGCTAAGTTGAATTTTCCGTTGGATGCCGGGAAGTCTGAGCCGCCGCCGCCGCCGCCGCCGCCGCCAGGAAATGGGCGGAACAGGACAAGAGAGACGAAAGTAAATTAA

Protein sequence

MELREEDDFSRLKLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPSEEEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEPPPPPPPPPGNGRNRTRETKVN

Homology

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BLAST of Carg08495 vs. NCBI nr
Match: KAG7035552.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 352.8 bits (904), Expect = 1.7e-93
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MELREEDDFSRLKLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPSE 60
           MELREEDDFSRLKLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPSE
Sbjct: 1   MELREEDDFSRLKLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPSE 60

Query: 61  EEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRV 120
           EEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRV
Sbjct: 61  EEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRV 120

Query: 121 WLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEPPPPPPPPPGNGRNRTRETKV 180
           WLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEPPPPPPPPPGNGRNRTRETKV
Sbjct: 121 WLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEPPPPPPPPPGNGRNRTRETKV 180

Query: 181 N 182
           N
Sbjct: 181 N 181

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BLAST of Carg08495 vs. NCBI nr
Match: XP_022957677.1 (ethylene-responsive transcription factor ERF106-like [Cucurbita moschata] >XP_022957678.1 ethylene-responsive transcription factor ERF106-like [Cucurbita moschata])

HSP 1 Score: 350.9 bits (899), Expect = 6.6e-93
Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1   MELREEDDFSRLKLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPSE 60
           MELREEDDFSRL LIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPSE
Sbjct: 1   MELREEDDFSRLNLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPSE 60

Query: 61  EEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRV 120
           EEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRV
Sbjct: 61  EEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRV 120

Query: 121 WLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEPPPPPPPPPGNGRNRTRETKV 180
           WLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEPPPPPPPPPGNGRNRTRETKV
Sbjct: 121 WLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEPPPPPPPPPGNGRNRTRETKV 180

Query: 181 N 182
           N
Sbjct: 181 N 181

[Close]

BLAST of Carg08495 vs. NCBI nr
Match: KAG6605642.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 348.6 bits (893), Expect = 3.3e-92
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MELREEDDFSRLKLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPSE 60
           MELREEDDFSRLKLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPSE
Sbjct: 1   MELREEDDFSRLKLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPSE 60

Query: 61  EEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRV 120
           EEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRV
Sbjct: 61  EEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRV 120

Query: 121 WLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEPPPPPPPPPGNGRNRTRETK 180
           WLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEPPPPPPPPPGNGRNRTRETK
Sbjct: 121 WLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEPPPPPPPPPGNGRNRTRETK 179

[Close]

BLAST of Carg08495 vs. NCBI nr
Match: XP_023533021.1 (ethylene-responsive transcription factor ERF106-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.5 bits (846), Expect = 9.2e-87
Identity = 175/182 (96.15%), Postives = 175/182 (96.15%), Query Frame = 0


Query: 1   MELREEDDFSRLKLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFM-KPS 60
           MELREEDDFSRLK IQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFM KPS
Sbjct: 1   MELREEDDFSRLKFIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKKPS 60

Query: 61  EEEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSR 120
           EEEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSR
Sbjct: 61  EEEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSR 120

Query: 121 VWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEPPPPPPPPPGNGRNRTRETK 180
           VWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSE    PPPPPGNGRNR RETK
Sbjct: 121 VWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSE----PPPPPGNGRNRRRETK 178

Query: 181 VN 182
           VN
Sbjct: 181 VN 178

[Close]

BLAST of Carg08495 vs. NCBI nr
Match: XP_022996034.1 (ethylene-responsive transcription factor ERF106-like [Cucurbita maxima])

HSP 1 Score: 309.7 bits (792), Expect = 1.7e-80
Identity = 164/181 (90.61%), Postives = 170/181 (93.92%), Query Frame = 0


Query: 1   MELREEDDFSRLKLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPSE 60
           MEL+EEDDFSRLK IQRHRLQD DSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKP E
Sbjct: 1   MELQEEDDFSRLKFIQRHRLQDPDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPLE 60

Query: 61  EEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRV 120
           EEEPPIQKPEQSERSSSPEVA+AEEV SSDGGR+YRGVRRRPWGKF AEIRDPSRKGSRV
Sbjct: 61  EEEPPIQKPEQSERSSSPEVAIAEEVLSSDGGRRYRGVRRRPWGKFVAEIRDPSRKGSRV 120

Query: 121 WLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEPPPPPPPPPGNGRNRTRETKV 180
           WLGTFNSDV+AARAYDSAAF+MRGRKAKLNFPLDAGKS     PPPPPGNGRNR R+TKV
Sbjct: 121 WLGTFNSDVEAARAYDSAAFRMRGRKAKLNFPLDAGKSW---LPPPPPGNGRNR-RKTKV 177

Query: 181 N 182
           N
Sbjct: 181 N 177

[Close]

BLAST of Carg08495 vs. ExPASy Swiss-Prot
Match: Q9LY05 (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana OX=3702 GN=ERF106 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-29
Identity = 88/187 (47.06%), Postives = 105/187 (56.15%), Query Frame = 0


Query: 7   DDFSRLKLIQRHRLQD---SDSFRTLLDFEFPLPSAFFSL-PSIKFEFEDFEFMKPSEEE 66
           ++ S L+ IQ H L+D    D F    DF+    S  + + P +  +  D   + P    
Sbjct: 5   EESSDLEAIQSHLLEDLLVCDGFMGDFDFDASFVSGLWCIEPHVPKQEPDSPVLDPDSFV 64

Query: 67  EPPIQKPEQSERSSSPE-------------VAMAEEVSSSDGGRKYRGVRRRPWGKFAAE 126
              +Q   +S  SSSPE             V  AE        R YRGVRRRPWGKFAAE
Sbjct: 65  NEFLQVEGESSSSSSPELNSSSSTYETDQSVKKAERFEEEVDARHYRGVRRRPWGKFAAE 124

Query: 127 IRDPSRKGSRVWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEPPPPPPPPPG 177
           IRDP++KGSR+WLGTF SDVDAARAYD AAFK+RGRKA LNFPLDAGK E       P  
Sbjct: 125 IRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAGKYE------APAN 184

[Close]

BLAST of Carg08495 vs. ExPASy Swiss-Prot
Match: Q9FKG2 (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana OX=3702 GN=ERF107 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.2e-26
Identity = 87/182 (47.80%), Postives = 107/182 (58.79%), Query Frame = 0


Query: 1   MELREEDDFSRLKLIQRHRLQD---SDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMK 60
           ME  EE   S L +IQ+H  +D    D F  + DF F   +AF    S  +  E F  + 
Sbjct: 1   METFEES--SDLDVIQKHLFEDLMIPDGF--IEDFVFD-DTAFV---SGLWSLEPFNPV- 60

Query: 61  PSEEEEPPIQKPE---------QSERSSSPEVAMAEEVSSSDGGRK---------YRGVR 120
           P  E   P+  P+         ++E SSS     + EV +    +K         YRGVR
Sbjct: 61  PKLEPSSPVLDPDSYVQEILQMEAESSSSSSTTTSPEVETVSNRKKTKRFEETRHYRGVR 120

Query: 121 RRPWGKFAAEIRDPSRKGSRVWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSE 162
           RRPWGKFAAEIRDP++KGSR+WLGTF SD+DAARAYD AAFK+RGRKA LNFPLDAGK +
Sbjct: 121 RRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFPLDAGKYD 173

[Close]

BLAST of Carg08495 vs. ExPASy Swiss-Prot
Match: Q8VY90 (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana OX=3702 GN=ERF105 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.6e-23
Identity = 50/67 (74.63%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 93  RKYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFP 152
           R YRGVRRRPWGK+AAEIRDP++KG RVWLGTF++ ++AAR YD AAFK+RG KA LNFP
Sbjct: 70  RHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFP 129

Query: 153 LDAGKSE 160
           L+AGK E
Sbjct: 130 LEAGKHE 136

[Close]

BLAST of Carg08495 vs. ExPASy Swiss-Prot
Match: O80341 (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=ERF5 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 5.7e-23
Identity = 71/159 (44.65%), Postives = 98/159 (61.64%), Query Frame = 0


Query: 29  LLDFEFPLPSAFFSLPSIKFEFE------DFEFMKPSEEEE-------------PP--IQ 88
           ++D + P    F S+P   FEF+      DF+F KPS + +             PP  I 
Sbjct: 70  IIDLDTPRSMEFLSIP---FEFDSEVSVSDFDF-KPSNQNQNQFEPELKSQIRKPPLKIS 129

Query: 89  KPEQSE------RSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRVW 148
            P ++E       ++ PEV    +  S +  + YRGVR+RPWGKFAAEIRDP+++GSRVW
Sbjct: 130 LPAKTEWIQFAAENTKPEVT---KPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVW 189

Query: 149 LGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEP 161
           LGTF++ ++AARAYD AAF++RG KA LNFPL+ GK +P
Sbjct: 190 LGTFDTAIEAARAYDEAAFRLRGSKAILNFPLEVGKWKP 221

[Close]

BLAST of Carg08495 vs. ExPASy Swiss-Prot
Match: Q40476 (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum OX=4097 GN=ERF1 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 8.2e-22
Identity = 56/97 (57.73%), Postives = 66/97 (68.04%), Query Frame = 0


Query: 68  KPEQSERS--SSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTF 127
           K EQ E     SP    A   +    GR YRGVRRRPWGKFAAEIRDP++ G+RVWLGT+
Sbjct: 76  KSEQREEEIVVSPAETTAAPAAELPRGRHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTY 135

Query: 128 NSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEPPP 163
            +D +AA AYD AA++MRG KA LNFP   G +EP P
Sbjct: 136 ETDEEAAIAYDKAAYRMRGSKAHLNFPHRIGLNEPEP 172

[Close]

BLAST of Carg08495 vs. ExPASy TrEMBL
Match: A0A6J1H0X6 (ethylene-responsive transcription factor ERF106-like OS=Cucurbita moschata OX=3662 GN=LOC111459141 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 3.2e-93
Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1   MELREEDDFSRLKLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPSE 60
           MELREEDDFSRL LIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPSE
Sbjct: 1   MELREEDDFSRLNLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPSE 60

Query: 61  EEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRV 120
           EEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRV
Sbjct: 61  EEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRV 120

Query: 121 WLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEPPPPPPPPPGNGRNRTRETKV 180
           WLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEPPPPPPPPPGNGRNRTRETKV
Sbjct: 121 WLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEPPPPPPPPPGNGRNRTRETKV 180

Query: 181 N 182
           N
Sbjct: 181 N 181

[Close]

BLAST of Carg08495 vs. ExPASy TrEMBL
Match: A0A6J1K7L0 (ethylene-responsive transcription factor ERF106-like OS=Cucurbita maxima OX=3661 GN=LOC111491361 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 8.1e-81
Identity = 164/181 (90.61%), Postives = 170/181 (93.92%), Query Frame = 0


Query: 1   MELREEDDFSRLKLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPSE 60
           MEL+EEDDFSRLK IQRHRLQD DSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKP E
Sbjct: 1   MELQEEDDFSRLKFIQRHRLQDPDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPLE 60

Query: 61  EEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRV 120
           EEEPPIQKPEQSERSSSPEVA+AEEV SSDGGR+YRGVRRRPWGKF AEIRDPSRKGSRV
Sbjct: 61  EEEPPIQKPEQSERSSSPEVAIAEEVLSSDGGRRYRGVRRRPWGKFVAEIRDPSRKGSRV 120

Query: 121 WLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEPPPPPPPPPGNGRNRTRETKV 180
           WLGTFNSDV+AARAYDSAAF+MRGRKAKLNFPLDAGKS     PPPPPGNGRNR R+TKV
Sbjct: 121 WLGTFNSDVEAARAYDSAAFRMRGRKAKLNFPLDAGKSW---LPPPPPGNGRNR-RKTKV 177

Query: 181 N 182
           N
Sbjct: 181 N 177

[Close]

BLAST of Carg08495 vs. ExPASy TrEMBL
Match: A0A6J1ESN1 (ethylene-responsive transcription factor ERF106-like OS=Cucurbita moschata OX=3662 GN=LOC111435630 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 3.8e-54
Identity = 123/168 (73.21%), Postives = 132/168 (78.57%), Query Frame = 0


Query: 20  LQDSDSFRTLLDFEF-PLPSAFFSLPSIKFEFEDFEFMKPSEEEEPPIQKP-----EQSE 79
           LQDSDSF  LL+FEF   P A FSLP IKFEFEDFE+MKPSEEEE P+Q P      QS 
Sbjct: 4   LQDSDSFFNLLEFEFHSPPPALFSLPPIKFEFEDFEYMKPSEEEESPVQNPRRHQERQST 63

Query: 80  RSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFNSDVDAAR 139
           RSSSPE  +      SDGGR+YRGVRRRPWGKFAAEIRDPSRKGSRVWLGTF+SDVDAAR
Sbjct: 64  RSSSPEAGL-----GSDGGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDAAR 123

Query: 140 AYDSAAFKMRGRKAKLNFPLDAGKSEPPPPPPPPPGNGRNRTRETKVN 182
           AYDSAAFK+RGRKAKLNFPLDAG S+      PPP NGR + RET VN
Sbjct: 124 AYDSAAFKLRGRKAKLNFPLDAGNSD------PPPSNGRKKRRETTVN 160

[Close]

BLAST of Carg08495 vs. ExPASy TrEMBL
Match: A0A5A7UNP1 (Ethylene-responsive transcription factor ERF106-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00050 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 2.4e-48
Identity = 119/184 (64.67%), Postives = 133/184 (72.28%), Query Frame = 0


Query: 1   MELREEDDFSRLKLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPS- 60
           +E   +D+FS L LI+ H LQDS SF TL DF F            K EFEDFE++KPS 
Sbjct: 5   VEEDNDDEFSPLNLIRYHLLQDSHSFSTLRDFGF------------KLEFEDFEYVKPSE 64

Query: 61  -EEEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGS 120
            EEEEPPIQ P++     SP        SS DGGR+YRGVRRRPWGKFAAEIRDPSRKGS
Sbjct: 65  EEEEEPPIQSPKRHPERQSP------RSSSPDGGRRYRGVRRRPWGKFAAEIRDPSRKGS 124

Query: 121 RVWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEPPPPPPPPPGNGR-NRTRE 180
           RVWLGTF+SDVDAARAYDSAAFK+RGRKAKLNFPLDAGKS+      PPPGNGR  + RE
Sbjct: 125 RVWLGTFDSDVDAARAYDSAAFKIRGRKAKLNFPLDAGKSD------PPPGNGRKKKRRE 164

Query: 181 TKVN 182
           T +N
Sbjct: 185 TNLN 164

[Close]

BLAST of Carg08495 vs. ExPASy TrEMBL
Match: E5GCU9 (AP2/ERF domain-containing transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 2.4e-48
Identity = 119/184 (64.67%), Postives = 133/184 (72.28%), Query Frame = 0


Query: 1   MELREEDDFSRLKLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPS- 60
           +E   +D+FS L LI+ H LQDS SF TL DF F            K EFEDFE++KPS 
Sbjct: 5   VEEDNDDEFSPLNLIRYHLLQDSHSFSTLRDFGF------------KLEFEDFEYVKPSE 64

Query: 61  -EEEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGS 120
            EEEEPPIQ P++     SP        SS DGGR+YRGVRRRPWGKFAAEIRDPSRKGS
Sbjct: 65  EEEEEPPIQSPKRHPERQSP------RSSSPDGGRRYRGVRRRPWGKFAAEIRDPSRKGS 124

Query: 121 RVWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEPPPPPPPPPGNGR-NRTRE 180
           RVWLGTF+SDVDAARAYDSAAFK+RGRKAKLNFPLDAGKS+      PPPGNGR  + RE
Sbjct: 125 RVWLGTFDSDVDAARAYDSAAFKIRGRKAKLNFPLDAGKSD------PPPGNGRKKKRRE 164

Query: 181 TKVN 182
           T +N
Sbjct: 185 TNLN 164

[Close]

BLAST of Carg08495 vs. TAIR 10
Match: AT5G07580.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 131.3 bits (329), Expect = 7.6e-31
Identity = 88/187 (47.06%), Postives = 105/187 (56.15%), Query Frame = 0


Query: 7   DDFSRLKLIQRHRLQD---SDSFRTLLDFEFPLPSAFFSL-PSIKFEFEDFEFMKPSEEE 66
           ++ S L+ IQ H L+D    D F    DF+    S  + + P +  +  D   + P    
Sbjct: 72  EESSDLEAIQSHLLEDLLVCDGFMGDFDFDASFVSGLWCIEPHVPKQEPDSPVLDPDSFV 131

Query: 67  EPPIQKPEQSERSSSPE-------------VAMAEEVSSSDGGRKYRGVRRRPWGKFAAE 126
              +Q   +S  SSSPE             V  AE        R YRGVRRRPWGKFAAE
Sbjct: 132 NEFLQVEGESSSSSSPELNSSSSTYETDQSVKKAERFEEEVDARHYRGVRRRPWGKFAAE 191

Query: 127 IRDPSRKGSRVWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEPPPPPPPPPG 177
           IRDP++KGSR+WLGTF SDVDAARAYD AAFK+RGRKA LNFPLDAGK E       P  
Sbjct: 192 IRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAGKYE------APAN 251

[Close]

BLAST of Carg08495 vs. TAIR 10
Match: AT5G61590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 119.4 bits (298), Expect = 3.0e-27
Identity = 87/182 (47.80%), Postives = 107/182 (58.79%), Query Frame = 0


Query: 1   MELREEDDFSRLKLIQRHRLQD---SDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMK 60
           ME  EE   S L +IQ+H  +D    D F  + DF F   +AF    S  +  E F  + 
Sbjct: 1   METFEES--SDLDVIQKHLFEDLMIPDGF--IEDFVFD-DTAFV---SGLWSLEPFNPV- 60

Query: 61  PSEEEEPPIQKPE---------QSERSSSPEVAMAEEVSSSDGGRK---------YRGVR 120
           P  E   P+  P+         ++E SSS     + EV +    +K         YRGVR
Sbjct: 61  PKLEPSSPVLDPDSYVQEILQMEAESSSSSSTTTSPEVETVSNRKKTKRFEETRHYRGVR 120

Query: 121 RRPWGKFAAEIRDPSRKGSRVWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSE 162
           RRPWGKFAAEIRDP++KGSR+WLGTF SD+DAARAYD AAFK+RGRKA LNFPLDAGK +
Sbjct: 121 RRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFPLDAGKYD 173

[Close]

BLAST of Carg08495 vs. TAIR 10
Match: AT5G51190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 110.2 bits (274), Expect = 1.8e-24
Identity = 50/67 (74.63%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 93  RKYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFP 152
           R YRGVRRRPWGK+AAEIRDP++KG RVWLGTF++ ++AAR YD AAFK+RG KA LNFP
Sbjct: 70  RHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFP 129

Query: 153 LDAGKSE 160
           L+AGK E
Sbjct: 130 LEAGKHE 136

[Close]

BLAST of Carg08495 vs. TAIR 10
Match: AT5G47230.1 (ethylene responsive element binding factor 5 )

HSP 1 Score: 109.0 bits (271), Expect = 4.0e-24
Identity = 71/159 (44.65%), Postives = 98/159 (61.64%), Query Frame = 0


Query: 29  LLDFEFPLPSAFFSLPSIKFEFE------DFEFMKPSEEEE-------------PP--IQ 88
           ++D + P    F S+P   FEF+      DF+F KPS + +             PP  I 
Sbjct: 70  IIDLDTPRSMEFLSIP---FEFDSEVSVSDFDF-KPSNQNQNQFEPELKSQIRKPPLKIS 129

Query: 89  KPEQSE------RSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRVW 148
            P ++E       ++ PEV    +  S +  + YRGVR+RPWGKFAAEIRDP+++GSRVW
Sbjct: 130 LPAKTEWIQFAAENTKPEVT---KPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVW 189

Query: 149 LGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEP 161
           LGTF++ ++AARAYD AAF++RG KA LNFPL+ GK +P
Sbjct: 190 LGTFDTAIEAARAYDEAAFRLRGSKAILNFPLEVGKWKP 221

[Close]

BLAST of Carg08495 vs. TAIR 10
Match: AT5G61600.1 (ethylene response factor 104 )

HSP 1 Score: 102.4 bits (254), Expect = 3.8e-22
Identity = 52/88 (59.09%), Postives = 65/88 (73.86%), Query Frame = 0


Query: 67  QKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFN 126
           +KP     S S  V+   E    +  R YRGVRRRPWGK+AAEIRDP++KG R+WLGT++
Sbjct: 62  RKPPLPNLSVSRTVSTKTEKEEEE--RHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYD 121

Query: 127 SDVDAARAYDSAAFKMRGRKAKLNFPLD 155
           + V+A RAYD AAF++RGRKA LNFPLD
Sbjct: 122 TAVEAGRAYDQAAFQLRGRKAILNFPLD 147

The following BLAST results are available for this feature:

BLAST of Carg08495 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035552.1	1.7e-93	100.00	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_022957677.1	6.6e-93	99.45	ethylene-responsive transcription factor ERF106-like [Cucurbita moschata] >XP_02...	[more]
KAG6605642.1	3.3e-92	100.00	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_023533021.1	9.2e-87	96.15	ethylene-responsive transcription factor ERF106-like [Cucurbita pepo subsp. pepo...	[more]
XP_022996034.1	1.7e-80	90.61	ethylene-responsive transcription factor ERF106-like [Cucurbita maxima]	[more]

BLAST of Carg08495 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LY05	1.1e-29	47.06	Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FKG2	4.2e-26	47.80	Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8VY90	2.6e-23	74.63	Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana OX=3702 ...	[more]
O80341	5.7e-23	44.65	Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q40476	8.2e-22	57.73	Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum OX=4097 GN=ERF1 ...	[more]

BLAST of Carg08495 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H0X6	3.2e-93	99.45	ethylene-responsive transcription factor ERF106-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1K7L0	8.1e-81	90.61	ethylene-responsive transcription factor ERF106-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1ESN1	3.8e-54	73.21	ethylene-responsive transcription factor ERF106-like OS=Cucurbita moschata OX=36...	[more]
A0A5A7UNP1	2.4e-48	64.67	Ethylene-responsive transcription factor ERF106-like protein OS=Cucumis melo var...	[more]
E5GCU9	2.4e-48	64.67	AP2/ERF domain-containing transcription factor OS=Cucumis melo subsp. melo OX=41...	[more]

BLAST of Carg08495 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07580.1	7.6e-31	47.06	Integrase-type DNA-binding superfamily protein	[more]
AT5G61590.1	3.0e-27	47.80	Integrase-type DNA-binding superfamily protein	[more]
AT5G51190.1	1.8e-24	74.63	Integrase-type DNA-binding superfamily protein	[more]
AT5G47230.1	4.0e-24	44.65	ethylene responsive element binding factor 5	[more]
AT5G61600.1	3.8e-22	59.09	ethylene response factor 104	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 95..106 score: 72.73 coord: 134..154 score: 57.84
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 94..158 e-value: 3.2E-37 score: 139.6
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 94..144 e-value: 6.1E-14 score: 52.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 94..152 score: 24.210123
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 94..152 e-value: 7.34713E-30 score: 102.35
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 93..154 e-value: 5.3E-29 score: 102.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..171
None	No IPR available	PANTHER	PTHR31190:SF222	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF105	coord: 44..160
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 44..160
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 94..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08495-RA	Carg08495-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity