Carg08469 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08469
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	rRNA processing protein-related
Location	Carg_Chr02: 5516111 .. 5517756 (-)
RNA-Seq Expression	Carg08469
Synteny	Carg08469

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAGCAATTTGCCCCGCTGGTTTTTAGGGTTTATCAAAGGGCTTTAAGCGTCGATTTCCCTCCGCACTTCGAGCAGCTGGAAGCGACGGTAGAAAGGTTGGCATTTGATTCTGAAATCATTTTCATTCTGAAATCATTTTCATTCTTTGATCCAAATCGGTAATCTGTTGTTGTTCTTCGTAATCCGTTGTTGTTCTTCGTAATCCGTTGTTGCTTCGCTTCCTTTTATTTGCCTTTGCGCTTATAATCATGTTTTGGTTTTGGCTGTTTGGTTTTAGTGCCTCAGTTGTCTCGATTTTGGTTCGTAGTCTTTGATTGTGTGAAAATGTGTAGTCATTAATTTTGATTATAATTATTTTCTTGCTCTTCTTGTTGCCTCGTATGTTATTGTATCGTGAGGATTATTGTTCGTCGTCCTTCGTTAGCTGGTATTAAGTATATTTTTGTATGGCATAGTTTTAAGTCTTCAAATGATGAACAATGCTGTCTTAACGCTGAAAGTAATGTTTGCGTTGAATCTTTATGTCATTTTGTTGACTTGATAATTGAATAGTTAGTCTGATTTTTCAAAAGATAATTTTTCCTCAAGATGTATTGCTATTTAATGGATGATACTAATGGAATTAAATCTAGATCTGTTGCTGTCTTCCTTCAATGCGTACATTTGGTTATATCGCCTATTTTTGGGATAGAATTAGCAGGTCTAGAGGTCTAACCTTAATGATGATCATCTTTTTCGATAGGTTTTAATGGGTGTATCAGATCAAAAGGATAGTTTCTTAAATGAGGATACCATGGAAGATGATGATCTTGATAGTGAAGATTCTGATTTTGGATCTGAATCTGAATCTGAATCTGAGGAAGAAGAGGATGTGAAATTGTCTGAACCGTCGAAGAATGCAGTATATAATGCCGACGGTCTTCTTGATAAGCTTGGAGACATTAGCTGGCCCGAAAACGTGGGATGGATACACAAACTATCTCTTGATATTGATCAAGAAAAAGAGGTAGATGTAAATGATGATCTAGCTAGAGAGCTTGCATTCTATACACAGGCTTTGCAGGGAACAAGAATGGCCCTTGAGAAGTTCCAATCTTTAGGACTTCCTTTTCTCAGGCCACCAGACTATTATGCAGAGATGGTGAAGACGGATACCCACATGGTAAAAGTGAAAGGCCGGTTGCTAATGGAACAGAAAAAGATGGAGGAGGCCGAGGAAAGAAGGAAGGCGAGAGAAGCGAAGAAATTAGCTAAAGAGATTCAAGCTCAGAAGCTAAAGGAGAGGGCTAAACAAAAGAAAGAGGAGATTGAGTCTGTTAAGAAATGGAGGAAGCAGAGGCAGAAGAGTGGTTTTTCTGATAAAGGCGGTGAGATGGACTTATCGTTTGAAGACGGGAAGGCGTTTGATAGGTCTGGTGGTAAGAAGAGGCCAGGGGTGTCTCCCGGCGATCGCTCCGGAGGGAAGGCAAGACATGGTGGAGGTGGAAAAGGGAAAAATCCGAAGAAAAGAGATTTTAGAGATTCGAAGTTCGGATTCGGCGGGAGGAAAAGTATGAAAAAACAAAACACAGCTGAGACAACAAATGATATTAGGGGATTCAACAATGGCAGTTTGTCAAGCAATAAAAGAAGGAAGAAGTCATAG

mRNA sequence

ATAGCAATTTGCCCCGCTGGTTTTTAGGGTTTATCAAAGGGCTTTAAGCGTCGATTTCCCTCCGCACTTCGAGCAGCTGGAAGCGACGGTAGAAAGGTTTTAATGGGTGTATCAGATCAAAAGGATAGTTTCTTAAATGAGGATACCATGGAAGATGATGATCTTGATAGTGAAGATTCTGATTTTGGATCTGAATCTGAATCTGAATCTGAGGAAGAAGAGGATGTGAAATTGTCTGAACCGTCGAAGAATGCAGTATATAATGCCGACGGTCTTCTTGATAAGCTTGGAGACATTAGCTGGCCCGAAAACGTGGGATGGATACACAAACTATCTCTTGATATTGATCAAGAAAAAGAGGTAGATGTAAATGATGATCTAGCTAGAGAGCTTGCATTCTATACACAGGCTTTGCAGGGAACAAGAATGGCCCTTGAGAAGTTCCAATCTTTAGGACTTCCTTTTCTCAGGCCACCAGACTATTATGCAGAGATGGTGAAGACGGATACCCACATGGTAAAAGTGAAAGGCCGGTTGCTAATGGAACAGAAAAAGATGGAGGAGGCCGAGGAAAGAAGGAAGGCGAGAGAAGCGAAGAAATTAGCTAAAGAGATTCAAGCTCAGAAGCTAAAGGAGAGGGCTAAACAAAAGAAAGAGGAGATTGAGTCTGTTAAGAAATGGAGGAAGCAGAGGCAGAAGAGTGGTTTTTCTGATAAAGGCGGTGAGATGGACTTATCGTTTGAAGACGGGAAGGCGTTTGATAGGTCTGGTGGTAAGAAGAGGCCAGGGGTGTCTCCCGGCGATCGCTCCGGAGGGAAGGCAAGACATGGTGGAGGTGGAAAAGGGAAAAATCCGAAGAAAAGAGATTTTAGAGATTCGAAGTTCGGATTCGGCGGGAGGAAAAGTATGAAAAAACAAAACACAGCTGAGACAACAAATGATATTAGGGGATTCAACAATGGCAGTTTGTCAAGCAATAAAAGAAGGAAGAAGTCATAG

Coding sequence (CDS)

ATGGGTGTATCAGATCAAAAGGATAGTTTCTTAAATGAGGATACCATGGAAGATGATGATCTTGATAGTGAAGATTCTGATTTTGGATCTGAATCTGAATCTGAATCTGAGGAAGAAGAGGATGTGAAATTGTCTGAACCGTCGAAGAATGCAGTATATAATGCCGACGGTCTTCTTGATAAGCTTGGAGACATTAGCTGGCCCGAAAACGTGGGATGGATACACAAACTATCTCTTGATATTGATCAAGAAAAAGAGGTAGATGTAAATGATGATCTAGCTAGAGAGCTTGCATTCTATACACAGGCTTTGCAGGGAACAAGAATGGCCCTTGAGAAGTTCCAATCTTTAGGACTTCCTTTTCTCAGGCCACCAGACTATTATGCAGAGATGGTGAAGACGGATACCCACATGGTAAAAGTGAAAGGCCGGTTGCTAATGGAACAGAAAAAGATGGAGGAGGCCGAGGAAAGAAGGAAGGCGAGAGAAGCGAAGAAATTAGCTAAAGAGATTCAAGCTCAGAAGCTAAAGGAGAGGGCTAAACAAAAGAAAGAGGAGATTGAGTCTGTTAAGAAATGGAGGAAGCAGAGGCAGAAGAGTGGTTTTTCTGATAAAGGCGGTGAGATGGACTTATCGTTTGAAGACGGGAAGGCGTTTGATAGGTCTGGTGGTAAGAAGAGGCCAGGGGTGTCTCCCGGCGATCGCTCCGGAGGGAAGGCAAGACATGGTGGAGGTGGAAAAGGGAAAAATCCGAAGAAAAGAGATTTTAGAGATTCGAAGTTCGGATTCGGCGGGAGGAAAAGTATGAAAAAACAAAACACAGCTGAGACAACAAATGATATTAGGGGATTCAACAATGGCAGTTTGTCAAGCAATAAAAGAAGGAAGAAGTCATAG

Protein sequence

MGVSDQKDSFLNEDTMEDDDLDSEDSDFGSESESESEEEEDVKLSEPSKNAVYNADGLLDKLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLPFLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKARHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS

Homology

[Close]

BLAST of Carg08469 vs. NCBI nr
Match: KAG7035578.1 (putative rRNA-processing protein EBP2-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 546.6 bits (1407), Expect = 1.3e-151
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 1   MGVSDQKDSFLNEDTMEDDDLDSEDSDFGSESESESEEEEDVKLSEPSKNAVYNADGLLD 60
           MGVSDQKDSFLNEDTMEDDDLDSEDSDFGSESESESEEEEDVKLSEPSKNAVYNADGLLD
Sbjct: 1   MGVSDQKDSFLNEDTMEDDDLDSEDSDFGSESESESEEEEDVKLSEPSKNAVYNADGLLD 60

Query: 61  KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP 120
           KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP
Sbjct: 61  KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP 120

Query: 121 FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA 180
           FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA
Sbjct: 121 FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA 180

Query: 181 KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA 240
           KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA
Sbjct: 181 KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA 240

Query: 241 RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 299
           RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS
Sbjct: 241 RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 298

[Close]

BLAST of Carg08469 vs. NCBI nr
Match: XP_022958567.1 (probable rRNA-processing protein EBP2 homolog [Cucurbita moschata] >XP_022958569.1 probable rRNA-processing protein EBP2 homolog [Cucurbita moschata])

HSP 1 Score: 545.0 bits (1403), Expect = 3.9e-151
Identity = 296/298 (99.33%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 1   MGVSDQKDSFLNEDTMEDDDLDSEDSDFGSESESESEEEEDVKLSEPSKNAVYNADGLLD 60
           MGVSD+KDSFLNEDTMEDDDLDSEDSDFGSESESESEEEEDVKLSEPSKNA+YNADGLLD
Sbjct: 1   MGVSDEKDSFLNEDTMEDDDLDSEDSDFGSESESESEEEEDVKLSEPSKNAIYNADGLLD 60

Query: 61  KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP 120
           KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP
Sbjct: 61  KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP 120

Query: 121 FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA 180
           FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA
Sbjct: 121 FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA 180

Query: 181 KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA 240
           KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA
Sbjct: 181 KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA 240

Query: 241 RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 299
           RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS
Sbjct: 241 RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 298

[Close]

BLAST of Carg08469 vs. NCBI nr
Match: XP_022995363.1 (probable rRNA-processing protein EBP2 homolog [Cucurbita maxima] >XP_022995364.1 probable rRNA-processing protein EBP2 homolog [Cucurbita maxima])

HSP 1 Score: 533.9 bits (1374), Expect = 9.0e-148
Identity = 292/298 (97.99%), Postives = 295/298 (98.99%), Query Frame = 0


Query: 1   MGVSDQKDSFLNEDTMEDDDLDSEDSDFGSESESESEEEEDVKLSEPSKNAVYNADGLLD 60
           MGVSD+KDSF+NEDTMEDDDLDSEDSDFG  SESESEEEEDVKLSEPSKNA+YNADGLLD
Sbjct: 1   MGVSDEKDSFVNEDTMEDDDLDSEDSDFG--SESESEEEEDVKLSEPSKNAIYNADGLLD 60

Query: 61  KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP 120
           KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP
Sbjct: 61  KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP 120

Query: 121 FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA 180
           FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA
Sbjct: 121 FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA 180

Query: 181 KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA 240
           KQKKEEIESVKKWRKQRQKSGFSDKGGEMDL FEDGKAFDRSGGKKRPGVSPGDRSGGKA
Sbjct: 181 KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLLFEDGKAFDRSGGKKRPGVSPGDRSGGKA 240

Query: 241 RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 299
           RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS
Sbjct: 241 RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 296

[Close]

BLAST of Carg08469 vs. NCBI nr
Match: XP_023534524.1 (probable rRNA-processing protein EBP2 homolog [Cucurbita pepo subsp. pepo] >XP_023534525.1 probable rRNA-processing protein EBP2 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 531.2 bits (1367), Expect = 5.8e-147
Identity = 291/298 (97.65%), Postives = 295/298 (98.99%), Query Frame = 0


Query: 1   MGVSDQKDSFLNEDTMEDDDLDSEDSDFGSESESESEEEEDVKLSEPSKNAVYNADGLLD 60
           MGVSD+KDSFLNEDTM DD+LDSEDS+FG  SESESEEEEDVKLSEPSKNA+YNADGLLD
Sbjct: 1   MGVSDKKDSFLNEDTMVDDELDSEDSEFG--SESESEEEEDVKLSEPSKNAIYNADGLLD 60

Query: 61  KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP 120
           KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP
Sbjct: 61  KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP 120

Query: 121 FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA 180
           FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA
Sbjct: 121 FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA 180

Query: 181 KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA 240
           KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA
Sbjct: 181 KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA 240

Query: 241 RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 299
           RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS
Sbjct: 241 RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 296

[Close]

BLAST of Carg08469 vs. NCBI nr
Match: XP_038876320.1 (probable rRNA-processing protein EBP2 homolog [Benincasa hispida])

HSP 1 Score: 479.2 bits (1232), Expect = 2.6e-131
Identity = 267/301 (88.70%), Postives = 282/301 (93.69%), Query Frame = 0


Query: 1   MGVSDQKDSFLNEDTMEDDDLDSEDSDFGSESESESEEEEDVKLSEPSKNAVYNADGLLD 60
           MGVS +  SFLNED ++DDDL SEDS+F SESESESEE+EDV+LSEPSKNA+YNADGLLD
Sbjct: 1   MGVSVKDASFLNEDKIDDDDLHSEDSEFESESESESEEDEDVELSEPSKNAIYNADGLLD 60

Query: 61  KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP 120
           KLGDISWPENV WIHKLSLDIDQEKEVDVNDDLARELAFYTQALQG RMALEKFQSLGLP
Sbjct: 61  KLGDISWPENVEWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGARMALEKFQSLGLP 120

Query: 121 FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA 180
           FLRP DYYAEMVKTDTHM KVKGRLL EQ+KMEEAEERRKAREAKKLAKEIQAQK KERA
Sbjct: 121 FLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMEEAEERRKAREAKKLAKEIQAQKQKERA 180

Query: 181 KQKKEEIESVKKWRKQRQKSGFS--DKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGG 240
           KQKKEEIESVKKWRKQRQK+GF+  DKGG+MD SFEDGK F+RSGGKKRPGVSPGDR+GG
Sbjct: 181 KQKKEEIESVKKWRKQRQKNGFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGDRTGG 240

Query: 241 KARHGGGGKGKNP-KKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKK 299
           KARHGGGGKGKNP KKRDFRDSKFGFGGRKS+ KQNTAETTNDI GFNNGSLSSNKRRK+
Sbjct: 241 KARHGGGGKGKNPKKKRDFRDSKFGFGGRKSLNKQNTAETTNDISGFNNGSLSSNKRRKR 300

[Close]

BLAST of Carg08469 vs. ExPASy Swiss-Prot
Match: Q9LUJ5 (Probable rRNA-processing protein EBP2 homolog OS=Arabidopsis thaliana OX=3702 GN=EBP2 PE=1 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 7.0e-87
Identity = 186/294 (63.27%), Postives = 226/294 (76.87%), Query Frame = 0


Query: 11  LNEDTMEDDDLDSEDSDFGSESESESEEEEDV------KLSEPSKNAVYNADGLLDKLGD 70
           L ED + DD+++  D D  ++SE+ES  + D       KL+EP+K A+YN DGLLDKL D
Sbjct: 3   LEEDIVSDDEMNMIDEDDATDSEAESLSDSDTENEITEKLAEPTKTAIYNRDGLLDKLQD 62

Query: 71  ISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLPFLRP 130
           ISWPE+V W HKL+++IDQ   VDVNDDLARE AFYTQAL+GTR A  K   +G+ FLRP
Sbjct: 63  ISWPEDVDWTHKLTVEIDQGGAVDVNDDLARETAFYTQALEGTREAFGKLNEMGVNFLRP 122

Query: 131 PDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERAKQKK 190
            +YYAEMVK+D HM KVK RLL E+K++EE+EERRKAR+ K++AKE+Q+QK+KERAK+KK
Sbjct: 123 ANYYAEMVKSDVHMEKVKSRLLHEKKQIEESEERRKARDNKRMAKEVQSQKMKERAKEKK 182

Query: 191 EEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKARHGG 250
           + IESVKKWRKQRQ+SGFSDK GE +L FE GK+F R GGKKRPGVSPGDRSGGK R   
Sbjct: 183 DNIESVKKWRKQRQQSGFSDKAGEPELDFESGKSFQRGGGKKRPGVSPGDRSGGKGR--- 242

Query: 251 GGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIR-GFNNGSLSSNKRRKK 298
                  KKR+FRDSKFG GGRK + KQNTAETTND + GF  G  S NKR+K+
Sbjct: 243 PTSRMGNKKREFRDSKFGHGGRKGLSKQNTAETTNDFKGGFRGGKASGNKRQKR 293

[Close]

BLAST of Carg08469 vs. ExPASy Swiss-Prot
Match: P36049 (rRNA-processing protein EBP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=EBP2 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.8e-18
Identity = 90/306 (29.41%), Postives = 155/306 (50.65%), Query Frame = 0


Query: 6   QKDSFLNEDTMEDDDLDSEDSDFGSESESESEEEEDVKLSEPS-----------KNAVYN 65
           + DS    D+ ED+D+ +++    SE + E EEE+DV LS+             K  V N
Sbjct: 141 EDDSESENDSEEDEDVVAKEE---SEEKEEQEEEQDVPLSDVEFDSDADVVPHHKLTVNN 200

Query: 66  ADGLLDKLG--DISWPENVGWIHK-LSLDIDQEKEV-DVNDDLARELAFYTQALQGTRMA 125
              +   L    + W ++    H+ ++ + + ++ + D+ DD  RELAFY Q+L    +A
Sbjct: 201 TKAMKHALERVQLPWKKHSFQEHQSVTSETNTDEHIKDIYDDTERELAFYKQSLDAVLVA 260

Query: 126 LEKFQSLGLPFLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKE 185
            ++ + L +PF RP DY+AEMVK+D HM K+KG+L+ E    +  EE R+ R+ KK  K+
Sbjct: 261 RDELKRLKVPFKRPLDYFAEMVKSDEHMDKIKGKLIEEASDKKAREEARRQRQLKKFGKQ 320

Query: 186 IQAQKLKERAKQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFE-DGKAFDRSGGKKRPG 245
           +Q   L++R  +K+E +E +K  + +R+ +        + +  E +GK FDR        
Sbjct: 321 VQNATLQKRQLEKRETLEKIKSLKNKRKHNEIDHSEFNVGVEEEVEGKRFDR-------- 380

Query: 246 VSPGDRSGGKARHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSL 296
                             G+   KR  +++K+G GG K  K++N A ++ D+ GF++  +
Sbjct: 381 ------------------GRPNGKRAAKNAKYGQGGMKRFKRKNDATSSADVSGFSSRKM 417

[Close]

BLAST of Carg08469 vs. ExPASy Swiss-Prot
Match: Q9I8J6 (Probable rRNA-processing protein EBP2 OS=Xenopus laevis OX=8355 GN=ebna1bp2 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.1e-18
Identity = 91/301 (30.23%), Postives = 144/301 (47.84%), Query Frame = 0


Query: 17  EDDDLDSEDSDFGSESESESEEEEDVK----------LSEPSKNAVYNADGLLDKLGDIS 76
           ED+     DSDF +   ++ E +E             + E  K    +A GL   L D+ 
Sbjct: 5   EDESSPESDSDFDASELTDKELQEAFSQGKLKPGLNVVLEGKKKPFNDASGLKQSLKDLK 64

Query: 77  WPENVGWIHKLSLDID--------------QEKEVDVNDDLARELAFYTQALQGTRMALE 136
               + W+ +L + +D                 +++  DD  RE+ FY QA      +L 
Sbjct: 65  --NELPWVERLDVTVDPVVDTTGQNGQTDPNTSDINAEDDFQREMCFYRQAQAAVLYSLP 124

Query: 137 KFQSLGLPFLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQ 196
           + + L +   RP DY+AEM KTD HM K++ +L ++Q  ME++E+ ++ R  +K  K++Q
Sbjct: 125 RLRKLKVATKRPDDYFAEMAKTDQHMQKIRHKLQLKQASMEKSEKAKQLRALRKYGKKVQ 184

Query: 197 AQKLKERAKQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSP 256
            + L++R K+K   +  +KK++K     G SDK     L F +G        KK P  + 
Sbjct: 185 VEVLQKRQKEKSAMVTQIKKYQK-----GLSDK-----LDFLEGD----QTPKKTPNKTG 244

Query: 257 GDRSGGKARHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSN 294
           G  +  KA      K     KR ++D KFGFGG+K   K NT  + ND+ GF  GS++  
Sbjct: 245 GSAAAQKA------KNTPSAKRRYKDQKFGFGGKKKGSKGNTKGSYNDVSGF-RGSVAHG 282

[Close]

BLAST of Carg08469 vs. ExPASy Swiss-Prot
Match: Q09958 (Probable rRNA-processing protein EBP2 homolog OS=Caenorhabditis elegans OX=6239 GN=C18A3.3 PE=1 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 4.5e-17
Identity = 97/304 (31.91%), Postives = 151/304 (49.67%), Query Frame = 0


Query: 8   DSFLNEDTMEDDDLDSEDSDFGSESESESEE-------EEDVKLSEPSKNAVYNADG-LL 67
           D+ + E  ME  D++  +SD G + E E +        ++ + +    K  + N    + 
Sbjct: 35  DNAIEEKPMEAMDIEEVESD-GDDDERELQAAFAAGLLKDGLNIQVAKKRPIINKSAEMK 94

Query: 68  DKLGDISWPENVGWIHKLSL---DIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQS 127
           +KL +I+  +++ W+  L +     + +K+V+ NDD  REL FY QA +  ++A  +  +
Sbjct: 95  EKLAEIT--KDLPWVETLEVVTPHSEMDKKVE-NDDFQRELNFYKQAEKAVQIAYPRLLN 154

Query: 128 LGLPFLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKL 187
           LG+  LRP DYYAEM K+DTHM KV+ RLL  Q+  E  E  R+ RE KK A ++Q + L
Sbjct: 155 LGIKVLRPTDYYAEMAKSDTHMQKVRKRLLGIQEMKERQEAFRRIREEKKFAVKVQKEVL 214

Query: 188 KERAKQKKEEIESVKKWRKQRQK------SGFSDKGGEMDLSFEDGKAFDRSGGKKRPGV 247
             +  +KK   E+VKK +K  ++      +     G + D     G   DR GG+     
Sbjct: 215 AAKNTEKKNLAEAVKKHKKGMKQQLEDMLNNVKRHGLDQDDDAPTGAFGDRLGGR----- 274

Query: 248 SPGDRSGGKARHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLS 295
             G    G A  GG  +     KR  +  KFG+GG+K   K+N  E+ ND+ G   G   
Sbjct: 275 --GGAGRGGAGRGGSMRNAGELKRKLKSDKFGYGGKKKGMKRNNKESFNDLFGAPRGGFG 327

[Close]

BLAST of Carg08469 vs. ExPASy Swiss-Prot
Match: Q9D903 (Probable rRNA-processing protein EBP2 OS=Mus musculus OX=10090 GN=Ebna1bp2 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.2e-16
Identity = 89/296 (30.07%), Postives = 149/296 (50.34%), Query Frame = 0


Query: 16  MEDDDLDSEDSDFGSESESESEEEE-----------DVKLSEPSKNAVYNADGLLDKLGD 75
           M+   L   DS+  +   S+ E ++           +V L +P K AV +  GL   L +
Sbjct: 1   MDTPPLSESDSESDACLASDQELQDAFSRGLLKPGLNVVLEKP-KKAVNDVSGLKQCLAE 60

Query: 76  ISWPENVGWIHKLSLDI----------------DQEKEVDVNDDLARELAFYTQALQGTR 135
             +  ++ W+ +L + +                DQ+K V+  DD  RE++FY QA     
Sbjct: 61  --FRRDLEWVERLDVTLGPVPEVSETQPTPQNQDQKKGVNPEDDFQREMSFYRQAQAAVL 120

Query: 136 MALEKFQSLGLPFLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLA 195
             L +   L +P  RP DY+AEM K+D  M K++ +L  +Q  ME++E+ ++ R  +K  
Sbjct: 121 AVLPRLHQLQVPTKRPTDYFAEMAKSDQQMQKIRQKLQTKQAAMEKSEKAKQLRALRKYG 180

Query: 196 KEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRP 255
           K++Q + L++R ++K   + ++KK++K     GFSDK   +D    D K  +RS      
Sbjct: 181 KKVQTEVLQKRQREKAHMMNAIKKYQK-----GFSDK---LDFLEGDQKPVERSA----- 240

Query: 256 GVSPGDRSGGKARHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGF 285
                 ++GGK +     KG N K+R +++ KFGFGG+K   K NT E+ +D+  F
Sbjct: 241 ------KAGGKGQQ--MSKGPNAKRR-YKNQKFGFGGKKKGSKWNTKESYDDVSSF 271

[Close]

BLAST of Carg08469 vs. ExPASy TrEMBL
Match: A0A6J1H264 (probable rRNA-processing protein EBP2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111459763 PE=3 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 1.9e-151
Identity = 296/298 (99.33%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 1   MGVSDQKDSFLNEDTMEDDDLDSEDSDFGSESESESEEEEDVKLSEPSKNAVYNADGLLD 60
           MGVSD+KDSFLNEDTMEDDDLDSEDSDFGSESESESEEEEDVKLSEPSKNA+YNADGLLD
Sbjct: 1   MGVSDEKDSFLNEDTMEDDDLDSEDSDFGSESESESEEEEDVKLSEPSKNAIYNADGLLD 60

Query: 61  KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP 120
           KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP
Sbjct: 61  KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP 120

Query: 121 FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA 180
           FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA
Sbjct: 121 FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA 180

Query: 181 KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA 240
           KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA
Sbjct: 181 KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA 240

Query: 241 RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 299
           RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS
Sbjct: 241 RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 298

[Close]

BLAST of Carg08469 vs. ExPASy TrEMBL
Match: A0A6J1K7Q8 (probable rRNA-processing protein EBP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490936 PE=3 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 4.4e-148
Identity = 292/298 (97.99%), Postives = 295/298 (98.99%), Query Frame = 0


Query: 1   MGVSDQKDSFLNEDTMEDDDLDSEDSDFGSESESESEEEEDVKLSEPSKNAVYNADGLLD 60
           MGVSD+KDSF+NEDTMEDDDLDSEDSDFG  SESESEEEEDVKLSEPSKNA+YNADGLLD
Sbjct: 1   MGVSDEKDSFVNEDTMEDDDLDSEDSDFG--SESESEEEEDVKLSEPSKNAIYNADGLLD 60

Query: 61  KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP 120
           KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP
Sbjct: 61  KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP 120

Query: 121 FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA 180
           FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA
Sbjct: 121 FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA 180

Query: 181 KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA 240
           KQKKEEIESVKKWRKQRQKSGFSDKGGEMDL FEDGKAFDRSGGKKRPGVSPGDRSGGKA
Sbjct: 181 KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLLFEDGKAFDRSGGKKRPGVSPGDRSGGKA 240

Query: 241 RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 299
           RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS
Sbjct: 241 RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 296

[Close]

BLAST of Carg08469 vs. ExPASy TrEMBL
Match: A0A6J1DTZ5 (probable rRNA-processing protein EBP2 homolog OS=Momordica charantia OX=3673 GN=LOC111023109 PE=3 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 2.7e-129
Identity = 265/301 (88.04%), Postives = 280/301 (93.02%), Query Frame = 0


Query: 1   MGVSDQKDSFLNEDTMEDDDLDSEDSDFGSESESESEEEEDVKLSEPSKNAVYNADGLLD 60
           MGV D+ DSFL+EDTMED+DLDSEDSDF SESE   EEEEDVKLSEPSKNA+YNADGLLD
Sbjct: 1   MGVLDKADSFLDEDTMEDEDLDSEDSDFESESE---EEEEDVKLSEPSKNAIYNADGLLD 60

Query: 61  KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP 120
           KLGD SWPEN GWIH+LSLDIDQEKEVDVNDDLARELAFYTQALQG RMA EKFQSLGLP
Sbjct: 61  KLGDTSWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFYTQALQGARMAFEKFQSLGLP 120

Query: 121 FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA 180
           FLRP DYYAEMVKTDTHM KVKGRLL EQ+KMEEA+ERRKAREAK+LAKEIQAQKLKERA
Sbjct: 121 FLRPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERA 180

Query: 181 KQKKEEIESVKKWRKQRQKSGFS--DKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGG 240
           KQKKEEIESVKKWRKQRQKSGF+  DKGGEMDL+FEDGK F+RS GKKRPGVSPGDRSGG
Sbjct: 181 KQKKEEIESVKKWRKQRQKSGFAGGDKGGEMDLTFEDGKTFERS-GKKRPGVSPGDRSGG 240

Query: 241 KARHGGGGKGKNP-KKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKK 299
           K RHGGGGKGKNP KKRDFRDSKFGFGGRKS+KKQNTAETT+DIR FN GSLSSNK+RK+
Sbjct: 241 KTRHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKR 297

[Close]

BLAST of Carg08469 vs. ExPASy TrEMBL
Match: A0A6J1DQA0 (probable rRNA-processing protein EBP2 homolog OS=Momordica charantia OX=3673 GN=LOC111022583 PE=3 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 7.7e-129
Identity = 267/301 (88.70%), Postives = 282/301 (93.69%), Query Frame = 0


Query: 1   MGVSDQKDSFLNEDTMEDDDLDSEDSDFGSESESESEEEEDVKLSEPSKNAVYNADGLLD 60
           MGVSD+ D FLNEDTME DDLDSEDSDF  ESES+SEE++DVKLSEPSK A++NADGLLD
Sbjct: 1   MGVSDKDDPFLNEDTMEYDDLDSEDSDF--ESESDSEEDKDVKLSEPSKTAIHNADGLLD 60

Query: 61  KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP 120
           KLGDISWPEN GWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQG RMA EKFQSLGLP
Sbjct: 61  KLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGARMAFEKFQSLGLP 120

Query: 121 FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA 180
           FLRP DYYAEMVKTDTHM KVKGRLL EQ+KMEEAEERRKAREAK+LAKEIQAQKLKERA
Sbjct: 121 FLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERA 180

Query: 181 KQKKEEIESVKKWRKQRQKSGFS--DKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGG 240
           KQKKEEIESVKKWRKQRQKSGF+  DKGGEMDL+FEDGKAF+RS GKKRPGVSPGDRSGG
Sbjct: 181 KQKKEEIESVKKWRKQRQKSGFAGGDKGGEMDLAFEDGKAFERS-GKKRPGVSPGDRSGG 240

Query: 241 KARHGGGGKGKNP-KKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKK 299
           KARH GGGKGKNP KKRDFRDSKFGFGGRKS+KKQNTAETTNDIR FN G+LSSNK+RK+
Sbjct: 241 KARH-GGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKR 297

[Close]

BLAST of Carg08469 vs. ExPASy TrEMBL
Match: A0A5D3DB33 (Putative rRNA-processing protein EBP2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G001370 PE=3 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.7e-128
Identity = 268/306 (87.58%), Postives = 281/306 (91.83%), Query Frame = 0


Query: 1   MGVSDQKDSFLNEDTMEDDDLDSEDSDFGSESESES---EEEEDVKLSEPSKNAVYNADG 60
           MGVS +   FLNEDT+EDDDL SEDS+F SESES S   EEEEDV+LSEPSKNA+YNADG
Sbjct: 10  MGVSIKDAEFLNEDTVEDDDLSSEDSEFESESESGSESEEEEEDVELSEPSKNAIYNADG 69

Query: 61  LLDKLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSL 120
           LLDKLGDISWPENV WIHKL+ DIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSL
Sbjct: 70  LLDKLGDISWPENVEWIHKLTFDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSL 129

Query: 121 GLPFLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLK 180
           GLPFLRP DYYAEMVKTDTHM KVKGRLL EQ+KMEEAEERRKAREAKKLAKEIQAQK K
Sbjct: 130 GLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMEEAEERRKAREAKKLAKEIQAQKQK 189

Query: 181 ERAKQKKEEIESVKKWRKQRQKSGFS--DKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDR 240
           ERAKQKKEEIESVKKWRKQRQK+ F+  DKGG+MD SFEDGK F+RSGGKKRPGVSPGDR
Sbjct: 190 ERAKQKKEEIESVKKWRKQRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGDR 249

Query: 241 SGGKARH--GGGGKGKN-PKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSN 299
           SGGKARH  GGGGKGKN  KKRDFRDSKFGFGGRKS+KKQNTAETTNDIRGFNNGSLS+N
Sbjct: 250 SGGKARHGGGGGGKGKNLKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNGSLSNN 309

[Close]

BLAST of Carg08469 vs. TAIR 10
Match: AT3G22660.1 (rRNA processing protein-related )

HSP 1 Score: 322.0 bits (824), Expect = 5.0e-88
Identity = 186/294 (63.27%), Postives = 226/294 (76.87%), Query Frame = 0


Query: 11  LNEDTMEDDDLDSEDSDFGSESESESEEEEDV------KLSEPSKNAVYNADGLLDKLGD 70
           L ED + DD+++  D D  ++SE+ES  + D       KL+EP+K A+YN DGLLDKL D
Sbjct: 3   LEEDIVSDDEMNMIDEDDATDSEAESLSDSDTENEITEKLAEPTKTAIYNRDGLLDKLQD 62

Query: 71  ISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLPFLRP 130
           ISWPE+V W HKL+++IDQ   VDVNDDLARE AFYTQAL+GTR A  K   +G+ FLRP
Sbjct: 63  ISWPEDVDWTHKLTVEIDQGGAVDVNDDLARETAFYTQALEGTREAFGKLNEMGVNFLRP 122

Query: 131 PDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERAKQKK 190
            +YYAEMVK+D HM KVK RLL E+K++EE+EERRKAR+ K++AKE+Q+QK+KERAK+KK
Sbjct: 123 ANYYAEMVKSDVHMEKVKSRLLHEKKQIEESEERRKARDNKRMAKEVQSQKMKERAKEKK 182

Query: 191 EEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKARHGG 250
           + IESVKKWRKQRQ+SGFSDK GE +L FE GK+F R GGKKRPGVSPGDRSGGK R   
Sbjct: 183 DNIESVKKWRKQRQQSGFSDKAGEPELDFESGKSFQRGGGKKRPGVSPGDRSGGKGR--- 242

Query: 251 GGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIR-GFNNGSLSSNKRRKK 298
                  KKR+FRDSKFG GGRK + KQNTAETTND + GF  G  S NKR+K+
Sbjct: 243 PTSRMGNKKREFRDSKFGHGGRKGLSKQNTAETTNDFKGGFRGGKASGNKRQKR 293

The following BLAST results are available for this feature:

BLAST of Carg08469 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035578.1	1.3e-151	100.00	putative rRNA-processing protein EBP2-like protein [Cucurbita argyrosperma subsp...	[more]
XP_022958567.1	3.9e-151	99.33	probable rRNA-processing protein EBP2 homolog [Cucurbita moschata] >XP_022958569...	[more]
XP_022995363.1	9.0e-148	97.99	probable rRNA-processing protein EBP2 homolog [Cucurbita maxima] >XP_022995364.1...	[more]
XP_023534524.1	5.8e-147	97.65	probable rRNA-processing protein EBP2 homolog [Cucurbita pepo subsp. pepo] >XP_0...	[more]
XP_038876320.1	2.6e-131	88.70	probable rRNA-processing protein EBP2 homolog [Benincasa hispida]	[more]

BLAST of Carg08469 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUJ5	7.0e-87	63.27	Probable rRNA-processing protein EBP2 homolog OS=Arabidopsis thaliana OX=3702 GN...	[more]
P36049	1.8e-18	29.41	rRNA-processing protein EBP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S...	[more]
Q9I8J6	3.1e-18	30.23	Probable rRNA-processing protein EBP2 OS=Xenopus laevis OX=8355 GN=ebna1bp2 PE=2...	[more]
Q09958	4.5e-17	31.91	Probable rRNA-processing protein EBP2 homolog OS=Caenorhabditis elegans OX=6239 ...	[more]
Q9D903	2.2e-16	30.07	Probable rRNA-processing protein EBP2 OS=Mus musculus OX=10090 GN=Ebna1bp2 PE=2 ...	[more]

BLAST of Carg08469 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H264	1.9e-151	99.33	probable rRNA-processing protein EBP2 homolog OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1K7Q8	4.4e-148	97.99	probable rRNA-processing protein EBP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1DTZ5	2.7e-129	88.04	probable rRNA-processing protein EBP2 homolog OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1DQA0	7.7e-129	88.70	probable rRNA-processing protein EBP2 homolog OS=Momordica charantia OX=3673 GN=...	[more]
A0A5D3DB33	1.7e-128	87.58	Putative rRNA-processing protein EBP2-like protein OS=Cucumis melo var. makuwa O...	[more]

BLAST of Carg08469 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22660.1	5.0e-88	63.27	rRNA processing protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 138..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..298
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	PANTHER	PTHR13028:SF2	BNAA01G24550D PROTEIN	coord: 17..297
IPR008610	Eukaryotic rRNA processing	PFAM	PF05890	Ebp2	coord: 28..295 e-value: 1.2E-73 score: 248.1
IPR008610	Eukaryotic rRNA processing	PANTHER	PTHR13028	RRNA PROCESSING PROTEIN EBNA1-BINDING PROTEIN-RELATED	coord: 17..297

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08469-RA	Carg08469-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042273	ribosomal large subunit biogenesis
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0034399	nuclear periphery
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030687	preribosome, large subunit precursor