Carg08442 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08442
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DNA polymerase delta subunit 4
Location	Carg_Chr02: 5687518 .. 5688686 (-)
RNA-Seq Expression	Carg08442
Synteny	Carg08442

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAAGAACAAAATTCAAATTTTGAAAATCGATCAGAGAGAGTGAGAGGAAGAAAAATGGCATCCGCTCGAGGAGGGATGAAAGATTTCTACAAGCAAAGGAAGAACAGTGGAGTCTCTAAGGTTTCAAAGCCCTCTTCTAGAAAAACCAAATCTCGGGCCAACTCTGCAACTTTGGACTCCGATGCCGTTCAACCGGCGGCTCTTATTTCTCACGGTTCCCTCGATCTCCGAGGTACAATCTCTCTCTCTATTCTTTTGTTTTCTTCATTGGGTTTCTTGAAAGTTTCATTACGGTTCTGGACTTTGTGCTTTGTGATTCTGAAGCATTAAGCATATTGCATTCGAGAAGCTTTTGGATTTCGATTACATTACATTTAAGTTATTCAATAGTCGAATTAAAGATTCTCGATGTTTAGTTCACTCGATGTTTCGGCTGAAGTATTATCGAATTTATATGTTTAGCCTTATGCTTCGTGATTATCAAGGATTAGGCATGCTGCAGTCTAGAAGTTGTTGGGTGTCACTTAGGTATTTGGTTATTTTAATTTTCGACTGTGAAATTGAATTAATATGTTTAGACTCCTGCTTCATGGTTATGAAAAGGATTAAGCATGAATTTCTATTACTTTCTGTCACAATTTAATTATGGACACCTAAAGTTCGGATTTTTTAAACCTTTCGATGCAATTCTGTCACCCGACTGATGCGTTTGGAAGTCTGATGGCTGGATATTTATGTACCTTGTGCTTCATCAATTTTTATGAACTTCATTTTGTTTTAGATGATTATGGTGAGTCTGAGAATATACTGAGGCAATTTGACATGAACATGGCCTATGGACCTTGCCTTGGAATGACAAGAATGGAACGATGGGAGCTTGCCCGTAAGCTTGGTTTGAACCCTCCAAAAGAAATTGAGTCACTCTTAAAGGGTGGGAAAGTGCAGTTAGAGTGCTTGTGGGCTTCCCGAATCTAAAGACTGCCCTGTTACCTATGTTATTTTCGGTTAATGTATGAAGTTTATGATGTGCTTTTGGACAAAATGTTCAGCCTCTGGCTGAAATCATAAATGCTCTTGTTTTCTTTTTTCCTTTGTCATGTTTCTTAAAAGAAATCTGTCTACCTTGTAGAATTTAAAATCTATGTCAATGTCATAATGGTGGTAGGGA

mRNA sequence

TCAAGAACAAAATTCAAATTTTGAAAATCGATCAGAGAGAGTGAGAGGAAGAAAAATGGCATCCGCTCGAGGAGGGATGAAAGATTTCTACAAGCAAAGGAAGAACAGTGGAGTCTCTAAGGTTTCAAAGCCCTCTTCTAGAAAAACCAAATCTCGGGCCAACTCTGCAACTTTGGACTCCGATGCCGTTCAACCGGCGGCTCTTATTTCTCACGGTTCCCTCGATCTCCGAGATGATTATGGTGAGTCTGAGAATATACTGAGGCAATTTGACATGAACATGGCCTATGGACCTTGCCTTGGAATGACAAGAATGGAACGATGGGAGCTTGCCCGTAAGCTTGGTTTGAACCCTCCAAAAGAAATTGAGTCACTCTTAAAGGGTGGGAAAGTGCAGTTAGAGTGCTTGTGGGCTTCCCGAATCTAAAGACTGCCCTGTTACCTATGTTATTTTCGGTTAATGTATGAAGTTTATGATGTGCTTTTGGACAAAATGTTCAGCCTCTGGCTGAAATCATAAATGCTCTTGTTTTCTTTTTTCCTTTGTCATGTTTCTTAAAAGAAATCTGTCTACCTTGTAGAATTTAAAATCTATGTCAATGTCATAATGGTGGTAGGGA

Coding sequence (CDS)

ATGGCATCCGCTCGAGGAGGGATGAAAGATTTCTACAAGCAAAGGAAGAACAGTGGAGTCTCTAAGGTTTCAAAGCCCTCTTCTAGAAAAACCAAATCTCGGGCCAACTCTGCAACTTTGGACTCCGATGCCGTTCAACCGGCGGCTCTTATTTCTCACGGTTCCCTCGATCTCCGAGATGATTATGGTGAGTCTGAGAATATACTGAGGCAATTTGACATGAACATGGCCTATGGACCTTGCCTTGGAATGACAAGAATGGAACGATGGGAGCTTGCCCGTAAGCTTGGTTTGAACCCTCCAAAAGAAATTGAGTCACTCTTAAAGGGTGGGAAAGTGCAGTTAGAGTGCTTGTGGGCTTCCCGAATCTAA

Protein sequence

MASARGGMKDFYKQRKNSGVSKVSKPSSRKTKSRANSATLDSDAVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIESLLKGGKVQLECLWASRI

Homology

[Close]

BLAST of Carg08442 vs. NCBI nr
Match: KAG6605696.1 (DNA polymerase delta subunit 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035605.1 DNA polymerase delta subunit 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 244.2 bits (622), Expect = 5.9e-61
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MASARGGMKDFYKQRKNSGVSKVSKPSSRKTKSRANSATLDSDAVQPAALISHGSLDLRD 60
           MASARGGMKDFYKQRKNSGVSKVSKPSSRKTKSRANSATLDSDAVQPAALISHGSLDLRD
Sbjct: 1   MASARGGMKDFYKQRKNSGVSKVSKPSSRKTKSRANSATLDSDAVQPAALISHGSLDLRD 60

Query: 61  DYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIESLLKGGKVQLECLWA 120
           DYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIESLLKGGKVQLECLWA
Sbjct: 61  DYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIESLLKGGKVQLECLWA 120

Query: 121 SRI 124
           SRI
Sbjct: 121 SRI 123

[Close]

BLAST of Carg08442 vs. NCBI nr
Match: XP_022957680.1 (uncharacterized protein LOC111459143 [Cucurbita moschata])

HSP 1 Score: 241.5 bits (615), Expect = 3.8e-60
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MASARGGMKDFYKQRKNSGVSKVSKPSSRKTKSRANSATLDSDAVQPAALISHGSLDLRD 60
           MASARGGMKDFYKQRKNSGVSKVSKPSSRKTKSRANSATLDSD VQPAALISHGSLDLRD
Sbjct: 1   MASARGGMKDFYKQRKNSGVSKVSKPSSRKTKSRANSATLDSDGVQPAALISHGSLDLRD 60

Query: 61  DYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIESLLKGGKVQLECLWA 120
           DYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIE+LLKGGKVQLECLWA
Sbjct: 61  DYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLKGGKVQLECLWA 120

Query: 121 SRI 124
           SRI
Sbjct: 121 SRI 123

[Close]

BLAST of Carg08442 vs. NCBI nr
Match: XP_023532644.1 (uncharacterized protein LOC111794744 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.3 bits (604), Expect = 7.2e-59
Identity = 119/123 (96.75%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 1   MASARGGMKDFYKQRKNSGVSKVSKPSSRKTKSRANSATLDSDAVQPAALISHGSLDLRD 60
           MASARGGMKDFYKQRKNSGVSKVSKPSSRKTKSRANSATLDSD VQPA LISHGSLDLRD
Sbjct: 1   MASARGGMKDFYKQRKNSGVSKVSKPSSRKTKSRANSATLDSDGVQPAVLISHGSLDLRD 60

Query: 61  DYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIESLLKGGKVQLECLWA 120
           DYGESENILRQFDMNMAYGPCLGMTRMERWELA KLGLNPPKEIE+LLKGGKVQLECLWA
Sbjct: 61  DYGESENILRQFDMNMAYGPCLGMTRMERWELAGKLGLNPPKEIETLLKGGKVQLECLWA 120

Query: 121 SRI 124
           SRI
Sbjct: 121 SRI 123

[Close]

BLAST of Carg08442 vs. NCBI nr
Match: XP_022995740.1 (uncharacterized protein LOC111491182 [Cucurbita maxima])

HSP 1 Score: 236.9 bits (603), Expect = 9.4e-59
Identity = 119/123 (96.75%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 1   MASARGGMKDFYKQRKNSGVSKVSKPSSRKTKSRANSATLDSDAVQPAALISHGSLDLRD 60
           MASARGGMKDFYKQRKNSGVSKVSKPSS KTKSRA+SATLDSD VQPAALISHGSLDLRD
Sbjct: 1   MASARGGMKDFYKQRKNSGVSKVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRD 60

Query: 61  DYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIESLLKGGKVQLECLWA 120
           DYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIE+LLKGGKVQLECLWA
Sbjct: 61  DYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLKGGKVQLECLWA 120

Query: 121 SRI 124
           SRI
Sbjct: 121 SRI 123

[Close]

BLAST of Carg08442 vs. NCBI nr
Match: XP_008467236.1 (PREDICTED: DNA polymerase delta subunit 4 [Cucumis melo] >KAA0055161.1 DNA polymerase delta subunit 4 [Cucumis melo var. makuwa] >TYK00302.1 DNA polymerase delta subunit 4 [Cucumis melo var. makuwa])

HSP 1 Score: 201.1 bits (510), Expect = 5.7e-48
Identity = 101/125 (80.80%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 1   MASARGGMKDFYKQRKNSGVS--KVSKPSSRKTKSRANSATLDSDAVQPAALISHGSLDL 60
           MAS RGG+KDFYKQRK+SG+S  K SKPSSRKTKS ANSA+L S+AVQPAAL+SHGSLDL
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSNAVQPAALVSHGSLDL 60

Query: 61  RDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIESLLKGGKVQLECL 120
           +DDYGESEN+LRQFDMNMAYGPCLGMTRM RWE A  LGLNPPK+I +LLK GKVQLECL
Sbjct: 61  QDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECL 120

Query: 121 WASRI 124
           W SR+
Sbjct: 121 WDSRV 125

[Close]

BLAST of Carg08442 vs. ExPASy Swiss-Prot
Match: Q3T0X9 (DNA polymerase delta subunit 4 OS=Bos taurus OX=9913 GN=POLD4 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-08
Identity = 26/59 (44.07%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 64  ESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIESLLKG--GKVQLEC-LW 120
           E   +LRQFD+   YGPC G+TR++RW  A ++GL PP E+  +L+   G  + +C LW
Sbjct: 44  EELELLRQFDLAWQYGPCTGITRLQRWHRAEQMGLKPPPEVHQVLQSHPGDPRFQCSLW 102

[Close]

BLAST of Carg08442 vs. ExPASy Swiss-Prot
Match: Q9HCU8 (DNA polymerase delta subunit 4 OS=Homo sapiens OX=9606 GN=POLD4 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-08
Identity = 28/64 (43.75%), Postives = 41/64 (64.06%), Query Frame = 0


Query: 59  RDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIESLLK--GGKVQLE 118
           RD+      +LRQFD+   YGPC G+TR++RW  A+++GL PP E+  +LK   G  + +
Sbjct: 39  RDEEEAELELLRQFDLAWQYGPCTGITRLQRWCRAKQMGLEPPPEVWQVLKTHPGDPRFQ 98

Query: 119 C-LW 120
           C LW
Sbjct: 99  CSLW 102

[Close]

BLAST of Carg08442 vs. ExPASy Swiss-Prot
Match: Q9CWP8 (DNA polymerase delta subunit 4 OS=Mus musculus OX=10090 GN=Pold4 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.7e-07
Identity = 22/42 (52.38%), Postives = 31/42 (73.81%), Query Frame = 0


Query: 68  ILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIESLLK 110
           +LRQFD+   YGPC G+TR++RW  A ++GL PP E+  +LK
Sbjct: 48  LLRQFDLAWQYGPCTGITRLQRWSRAEQMGLKPPLEVYQVLK 89

[Close]

BLAST of Carg08442 vs. ExPASy Swiss-Prot
Match: O59835 (DNA polymerase delta subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cdm1 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.3e-06
Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = 0


Query: 66  ENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIESLL 109
           E IL  FD    YGP LGMTRM+RW+ A+   LNPP+ +  +L
Sbjct: 94  EFILHHFDTTARYGPYLGMTRMQRWKRAKNFNLNPPETVGKIL 136

[Close]

BLAST of Carg08442 vs. ExPASy TrEMBL
Match: A0A6J1H180 (uncharacterized protein LOC111459143 OS=Cucurbita moschata OX=3662 GN=LOC111459143 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.8e-60
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MASARGGMKDFYKQRKNSGVSKVSKPSSRKTKSRANSATLDSDAVQPAALISHGSLDLRD 60
           MASARGGMKDFYKQRKNSGVSKVSKPSSRKTKSRANSATLDSD VQPAALISHGSLDLRD
Sbjct: 1   MASARGGMKDFYKQRKNSGVSKVSKPSSRKTKSRANSATLDSDGVQPAALISHGSLDLRD 60

Query: 61  DYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIESLLKGGKVQLECLWA 120
           DYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIE+LLKGGKVQLECLWA
Sbjct: 61  DYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLKGGKVQLECLWA 120

Query: 121 SRI 124
           SRI
Sbjct: 121 SRI 123

[Close]

BLAST of Carg08442 vs. ExPASy TrEMBL
Match: A0A6J1K4T3 (uncharacterized protein LOC111491182 OS=Cucurbita maxima OX=3661 GN=LOC111491182 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 4.5e-59
Identity = 119/123 (96.75%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 1   MASARGGMKDFYKQRKNSGVSKVSKPSSRKTKSRANSATLDSDAVQPAALISHGSLDLRD 60
           MASARGGMKDFYKQRKNSGVSKVSKPSS KTKSRA+SATLDSD VQPAALISHGSLDLRD
Sbjct: 1   MASARGGMKDFYKQRKNSGVSKVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRD 60

Query: 61  DYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIESLLKGGKVQLECLWA 120
           DYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIE+LLKGGKVQLECLWA
Sbjct: 61  DYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLKGGKVQLECLWA 120

Query: 121 SRI 124
           SRI
Sbjct: 121 SRI 123

[Close]

BLAST of Carg08442 vs. ExPASy TrEMBL
Match: A0A5A7UNL0 (DNA polymerase delta subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00460 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.8e-48
Identity = 101/125 (80.80%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 1   MASARGGMKDFYKQRKNSGVS--KVSKPSSRKTKSRANSATLDSDAVQPAALISHGSLDL 60
           MAS RGG+KDFYKQRK+SG+S  K SKPSSRKTKS ANSA+L S+AVQPAAL+SHGSLDL
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSNAVQPAALVSHGSLDL 60

Query: 61  RDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIESLLKGGKVQLECL 120
           +DDYGESEN+LRQFDMNMAYGPCLGMTRM RWE A  LGLNPPK+I +LLK GKVQLECL
Sbjct: 61  QDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECL 120

Query: 121 WASRI 124
           W SR+
Sbjct: 121 WDSRV 125

[Close]

BLAST of Carg08442 vs. ExPASy TrEMBL
Match: A0A1S3CT23 (DNA polymerase delta subunit 4 OS=Cucumis melo OX=3656 GN=LOC103504636 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.8e-48
Identity = 101/125 (80.80%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 1   MASARGGMKDFYKQRKNSGVS--KVSKPSSRKTKSRANSATLDSDAVQPAALISHGSLDL 60
           MAS RGG+KDFYKQRK+SG+S  K SKPSSRKTKS ANSA+L S+AVQPAAL+SHGSLDL
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSNAVQPAALVSHGSLDL 60

Query: 61  RDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIESLLKGGKVQLECL 120
           +DDYGESEN+LRQFDMNMAYGPCLGMTRM RWE A  LGLNPPK+I +LLK GKVQLECL
Sbjct: 61  QDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECL 120

Query: 121 WASRI 124
           W SR+
Sbjct: 121 WDSRV 125

[Close]

BLAST of Carg08442 vs. ExPASy TrEMBL
Match: A0A0A0KND6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172885 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.0e-47
Identity = 100/125 (80.00%), Postives = 109/125 (87.20%), Query Frame = 0


Query: 1   MASARGGMKDFYKQRKNSGVS--KVSKPSSRKTKSRANSATLDSDAVQPAALISHGSLDL 60
           MAS RGG+KDFYKQRK+SG+S  K SKPSSRKTKS ANSA+L SDAVQPAAL+SHGSLDL
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSDAVQPAALVSHGSLDL 60

Query: 61  RDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIESLLKGGKVQLECL 120
           +DDYG SEN LRQFDMN AYGPCLGMTRM RWE A  LGLNPPK+I +LLK GKVQLECL
Sbjct: 61  QDDYGVSENTLRQFDMNTAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECL 120

Query: 121 WASRI 124
           W SR+
Sbjct: 121 WDSRV 125

[Close]

BLAST of Carg08442 vs. TAIR 10
Match: AT1G09815.1 (polymerase delta 4 )

HSP 1 Score: 145.2 bits (365), Expect = 3.5e-35
Identity = 75/126 (59.52%), Postives = 94/126 (74.60%), Query Frame = 0


Query: 1   MASARGGMKDFYKQRKNS---GVSKVSKPSSRKTKSRANSATLDSDAVQPAALISHGSLD 60
           MA+    +K FYKQ K++   G+SK SKPSSRK   + ++A   SD  QPAALISHGS+D
Sbjct: 1   MATTAKNLKGFYKQTKSNITGGISK-SKPSSRKVAPK-HAAAQGSDVTQPAALISHGSVD 60

Query: 61  LRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIESLLKGGKVQLEC 120
           L +DY + E +LRQFDMN+ YGPCLGMTR++RWE A +LG+NPP EIE LLK GKVQ +C
Sbjct: 61  LNEDYDKEEEMLRQFDMNITYGPCLGMTRLDRWERAVRLGMNPPNEIEKLLKTGKVQQDC 120

Query: 121 LWASRI 124
           LW  R+
Sbjct: 121 LWQGRV 124

The following BLAST results are available for this feature:

BLAST of Carg08442 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605696.1	5.9e-61	100.00	DNA polymerase delta subunit 4, partial [Cucurbita argyrosperma subsp. sororia] ...	[more]
XP_022957680.1	3.8e-60	98.37	uncharacterized protein LOC111459143 [Cucurbita moschata]	[more]
XP_023532644.1	7.2e-59	96.75	uncharacterized protein LOC111794744 [Cucurbita pepo subsp. pepo]	[more]
XP_022995740.1	9.4e-59	96.75	uncharacterized protein LOC111491182 [Cucurbita maxima]	[more]
XP_008467236.1	5.7e-48	80.80	PREDICTED: DNA polymerase delta subunit 4 [Cucumis melo] >KAA0055161.1 DNA polym...	[more]

BLAST of Carg08442 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3T0X9	1.6e-08	44.07	DNA polymerase delta subunit 4 OS=Bos taurus OX=9913 GN=POLD4 PE=1 SV=1	[more]
Q9HCU8	2.1e-08	43.75	DNA polymerase delta subunit 4 OS=Homo sapiens OX=9606 GN=POLD4 PE=1 SV=1	[more]
Q9CWP8	1.7e-07	52.38	DNA polymerase delta subunit 4 OS=Mus musculus OX=10090 GN=Pold4 PE=1 SV=1	[more]
O59835	4.3e-06	51.16	DNA polymerase delta subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2...	[more]

BLAST of Carg08442 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H180	1.8e-60	98.37	uncharacterized protein LOC111459143 OS=Cucurbita moschata OX=3662 GN=LOC1114591...	[more]
A0A6J1K4T3	4.5e-59	96.75	uncharacterized protein LOC111491182 OS=Cucurbita maxima OX=3661 GN=LOC111491182...	[more]
A0A5A7UNL0	2.8e-48	80.80	DNA polymerase delta subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CT23	2.8e-48	80.80	DNA polymerase delta subunit 4 OS=Cucumis melo OX=3656 GN=LOC103504636 PE=4 SV=1	[more]
A0A0A0KND6	4.0e-47	80.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172885 PE=4 SV=1	[more]

BLAST of Carg08442 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09815.1	3.5e-35	59.52	polymerase delta 4	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007218	DNA polymerase delta, subunit 4	PFAM	PF04081	DNA_pol_delta_4	coord: 60..109 e-value: 7.8E-21 score: 74.8
IPR007218	DNA polymerase delta, subunit 4	PANTHER	PTHR14303	DNA POLYMERASE DELTA SUBUNIT 4	coord: 1..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..41

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08442-RA	Carg08442-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0000731	DNA synthesis involved in DNA repair
biological_process	GO:0006260	DNA replication
cellular_component	GO:0043625	delta DNA polymerase complex
molecular_function	GO:0003887	DNA-directed DNA polymerase activity