Carg08416 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08416
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	remorin-like
Location	Carg_Chr02: 5862435 .. 5863701 (-)
RNA-Seq Expression	Carg08416
Synteny	Carg08416

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAAGTAATATGTAACCATCATCCAGCTCAGTCTTCAACACAACCAACAGTTCCCCCACTTTCTCCTTCCTCCTTCCTTCTCTCCACCCAGATTTCCCCCATGGCTGACGCTTCCAACAACCCCGTAACGGCGGCGCCACCCTCCAATCCTCCGCCGCAGCCGGCCGAAGAAGAAGCCCCCAAAGACGTCGCCGAGGAGAAAGCTGTAATTCCACCGCCCCCTCCACCCGTCGAAGACAAACCCGACGACTCCAAAGCCCTTGTTCTAGTTGAAAGTAAATAATCAACAAACCCACCTTTTATTTCATGTGTTTTACATAAATCCGTTGTTAATTTTCAGCTCAGAGTTGAATTTAGGGCTTTTTAATCGATTATCTTGCTCTGTTATTCTCTGTGTTCTGTTCTTGTGTTCTTCAGAGGTTTCAGAACCAGATGAACCCAAATCCACTGAGGGCTCTGTAAACAGAGGTTTTAATTACAAAAACCCTTAATTATTTTCTTAATTATTGTTTGTTTCAATGAAATTTAAGAGTTAATTTAATTGTTCAGATGCTGTTCTAGCAAAAGTTGCAACAGAGAAGAGGTTGTCGCTGATTAAAGCTTGGGAAGAAAGCGAGAAATCAAAGGCTGAAAACAAGTAAGATTGTTTCATTTCCTCACCATTCTCTTCGATTTCGTTTTGAAATTGAAATTCACTGAAACCCCTTTGAGCAGAGCTCACAAGAAGCTGTCCTCTGTCGTGGCATGGGAGAATAGCAGAAAAGCGTCTGTGGAGGCTGAGTTGAAGAAGATTGAGGTACCCATTGCTCTGTTCGGCTACCCATTTTGGGTGTCTTTTTTGGGGTTTGGTTAACTGTACGGAAATTTGATTTGCAGGAAAGCTTGGAGAAGAAGAAGGCTGAATACGTTGAGAAAATGAAGAACAGAATTGCTCTGCTTCACAAATCTGCGGAGGAGAAGAGGGCGGTGATCGAAGCTATGCGCGGAGAAGATCTTCTCAAGGCGGAGGAGACGGCGGCGAAGTATCGCGCCACTGGTACTGCACCGAAGAAGCTTTTTGGGTGCTTTTAGAACTGAATGTGTCTGGTCTCATCACTGATTAGTGTTCGTTGTCTTGAAATGTTCTTATTATTTGGTTGTTCTTGTTGTTTGTGGTTGATTTATTGGTCTGTTTAGTGAAGAGGTTTATTTTTATTTTTAATTGTTTGTGAATATGATATTTGGACCAACATTACTTTGAATGTAAATCATTGTTAAATGTTTGTT

mRNA sequence

ATTAAGTAATATGTAACCATCATCCAGCTCAGTCTTCAACACAACCAACAGTTCCCCCACTTTCTCCTTCCTCCTTCCTTCTCTCCACCCAGATTTCCCCCATGGCTGACGCTTCCAACAACCCCGTAACGGCGGCGCCACCCTCCAATCCTCCGCCGCAGCCGGCCGAAGAAGAAGCCCCCAAAGACGTCGCCGAGGAGAAAGCTGTAATTCCACCGCCCCCTCCACCCGTCGAAGACAAACCCGACGACTCCAAAGCCCTTGTTCTAGTTGAAAAGGTTTCAGAACCAGATGAACCCAAATCCACTGAGGGCTCTGTAAACAGAGATGCTGTTCTAGCAAAAGTTGCAACAGAGAAGAGGTTGTCGCTGATTAAAGCTTGGGAAGAAAGCGAGAAATCAAAGGCTGAAAACAAAGCTCACAAGAAGCTGTCCTCTGTCGTGGCATGGGAGAATAGCAGAAAAGCGTCTGTGGAGGCTGAGTTGAAGAAGATTGAGGAAAGCTTGGAGAAGAAGAAGGCTGAATACGTTGAGAAAATGAAGAACAGAATTGCTCTGCTTCACAAATCTGCGGAGGAGAAGAGGGCGGTGATCGAAGCTATGCGCGGAGAAGATCTTCTCAAGGCGGAGGAGACGGCGGCGAAGTATCGCGCCACTGGTACTGCACCGAAGAAGCTTTTTGGGTGCTTTTAGAACTGAATGTGTCTGGTCTCATCACTGATTAGTGTTCGTTGTCTTGAAATGTTCTTATTATTTGGTTGTTCTTGTTGTTTGTGGTTGATTTATTGGTCTGTTTAGTGAAGAGGTTTATTTTTATTTTTAATTGTTTGTGAATATGATATTTGGACCAACATTACTTTGAATGTAAATCATTGTTAAATGTTTGTT

Coding sequence (CDS)

ATGGCTGACGCTTCCAACAACCCCGTAACGGCGGCGCCACCCTCCAATCCTCCGCCGCAGCCGGCCGAAGAAGAAGCCCCCAAAGACGTCGCCGAGGAGAAAGCTGTAATTCCACCGCCCCCTCCACCCGTCGAAGACAAACCCGACGACTCCAAAGCCCTTGTTCTAGTTGAAAAGGTTTCAGAACCAGATGAACCCAAATCCACTGAGGGCTCTGTAAACAGAGATGCTGTTCTAGCAAAAGTTGCAACAGAGAAGAGGTTGTCGCTGATTAAAGCTTGGGAAGAAAGCGAGAAATCAAAGGCTGAAAACAAAGCTCACAAGAAGCTGTCCTCTGTCGTGGCATGGGAGAATAGCAGAAAAGCGTCTGTGGAGGCTGAGTTGAAGAAGATTGAGGAAAGCTTGGAGAAGAAGAAGGCTGAATACGTTGAGAAAATGAAGAACAGAATTGCTCTGCTTCACAAATCTGCGGAGGAGAAGAGGGCGGTGATCGAAGCTATGCGCGGAGAAGATCTTCTCAAGGCGGAGGAGACGGCGGCGAAGTATCGCGCCACTGGTACTGCACCGAAGAAGCTTTTTGGGTGCTTTTAG

Protein sequence

MADASNNPVTAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKVSEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKYRATGTAPKKLFGCF

Homology

[Close]

BLAST of Carg08416 vs. NCBI nr
Match: KAG7035629.1 (hypothetical protein SDJN02_02427 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 353.6 bits (906), Expect = 1.1e-93
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MADASNNPVTAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MADASNNPVTAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV
Sbjct: 1   MADASNNPVTAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
           SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR
Sbjct: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA
Sbjct: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180

Query: 181 KYRATGTAPKKLFGCF 197
           KYRATGTAPKKLFGCF
Sbjct: 181 KYRATGTAPKKLFGCF 196

[Close]

BLAST of Carg08416 vs. NCBI nr
Match: KAG6605721.1 (hypothetical protein SDJN03_03038, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-92
Identity = 194/196 (98.98%), Postives = 195/196 (99.49%), Query Frame = 0


Query: 1   MADASNNPVTAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MADASNNPV+AAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV
Sbjct: 1   MADASNNPVSAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
           SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR
Sbjct: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKKAEYVEKM NRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA
Sbjct: 121 KASVEAELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180

Query: 181 KYRATGTAPKKLFGCF 197
           KYRATGTAPKKLFGCF
Sbjct: 181 KYRATGTAPKKLFGCF 196

[Close]

BLAST of Carg08416 vs. NCBI nr
Match: XP_023532341.1 (remorin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349.7 bits (896), Expect = 1.6e-92
Identity = 194/196 (98.98%), Postives = 195/196 (99.49%), Query Frame = 0


Query: 1   MADASNNPVTAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MADASNNP +AAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV
Sbjct: 1   MADASNNPESAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
           SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR
Sbjct: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA
Sbjct: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180

Query: 181 KYRATGTAPKKLFGCF 197
           KYRATGTAPKKLFGCF
Sbjct: 181 KYRATGTAPKKLFGCF 196

[Close]

BLAST of Carg08416 vs. NCBI nr
Match: XP_022957725.1 (remorin-like [Cucurbita moschata])

HSP 1 Score: 346.7 bits (888), Expect = 1.3e-91
Identity = 193/196 (98.47%), Postives = 194/196 (98.98%), Query Frame = 0


Query: 1   MADASNNPVTAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MADASNNP +AAPPSNPPPQPAEEEA KDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV
Sbjct: 1   MADASNNPESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
           SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR
Sbjct: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA
Sbjct: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180

Query: 181 KYRATGTAPKKLFGCF 197
           KYRATGTAPKKLFGCF
Sbjct: 181 KYRATGTAPKKLFGCF 196

[Close]

BLAST of Carg08416 vs. NCBI nr
Match: XP_022995196.1 (remorin-like [Cucurbita maxima])

HSP 1 Score: 341.3 bits (874), Expect = 5.6e-90
Identity = 190/196 (96.94%), Postives = 192/196 (97.96%), Query Frame = 0


Query: 1   MADASNNPVTAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MADASNNP +AAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALV VE+ 
Sbjct: 1   MADASNNPESAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVPVEQY 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
           SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR
Sbjct: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEE AA
Sbjct: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEEMAA 180

Query: 181 KYRATGTAPKKLFGCF 197
           KYRATGTAPKKLFGCF
Sbjct: 181 KYRATGTAPKKLFGCF 196

[Close]

BLAST of Carg08416 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.3e-57
Identity = 140/201 (69.65%), Postives = 163/201 (81.09%), Query Frame = 0


Query: 1   MADASNNPVTAAPPSNPPPQPAEEEAPKD-VAEEKAVIPPP-PPPVE--DKPDDSKALVL 60
           MA+     V    P+  PP P   EAPK+ VA+EKA++ P  PPP E  +KPDDSKALV+
Sbjct: 1   MAELEAKKVEIVDPA--PPAPGPVEAPKEVVADEKAIVAPALPPPAEEKEKPDDSKALVV 60

Query: 61  VE-KVSEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVA 120
           VE K  EP + K  EGS++RDAVLA+VATEKR+SLIKAWEESEKSKAENKA KK+S++ A
Sbjct: 61  VETKAPEPADEKK-EGSIDRDAVLARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGA 120

Query: 121 WENSRKASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKA 180
           WENS+KA++EAELKK+EE LEKKKAEY EKMKN+IALLHK AEEKRA+IEA RGEDLLKA
Sbjct: 121 WENSKKANLEAELKKMEEQLEKKKAEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKA 180

Query: 181 EETAAKYRATGTAPKKLFGCF 197
           EE AAKYRATGTAPKK+ G F
Sbjct: 181 EELAAKYRATGTAPKKILGIF 198

[Close]

BLAST of Carg08416 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.8e-52
Identity = 128/192 (66.67%), Postives = 152/192 (79.17%), Query Frame = 0


Query: 10  TAAPPSNPPPQPAEE-EAPKDVA-EEKAVIPPP----PPPVEDKPDDSKALVLVEKVSEP 69
           T + P+  P  P E+  A  DVA +EK V PPP    P P E+K +DSKA+V V  V + 
Sbjct: 12  TVSEPTPTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQEDSKAIVPV--VPKE 71

Query: 70  DEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKAS 129
            E +  EGSVNRDAVLA+V TEKR+SLIKAWEE+EK K ENKA KKLSS+ +WEN++KA+
Sbjct: 72  VEEEKKEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAA 131

Query: 130 VEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKYR 189
           VEAELKK+EE LEKKKAEYVE+MKN+IA +HK AEEKRA+IEA RGE++LKAEE AAKYR
Sbjct: 132 VEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYR 191

Query: 190 ATGTAPKKLFGC 196
           ATGTAPKKLFGC
Sbjct: 192 ATGTAPKKLFGC 201

[Close]

BLAST of Carg08416 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.7e-49
Identity = 123/198 (62.12%), Postives = 142/198 (71.72%), Query Frame = 0


Query: 10  TAAPPSNPPPQPAEEEAP----------KDVAEEKAVIPPPPPPVEDKPDDSKALVLVEK 69
           T AP   P P PAE  AP          KDVAEEK   PPP    E   DDSKAL +VEK
Sbjct: 19  TPAPADTPAPAPAEIPAPAPAPTPADVTKDVAEEKIQNPPP----EQIFDDSKALTVVEK 78

Query: 70  -VSEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWEN 129
            V EP   K    S++RD  LA ++ EKRLS ++AWEESEKSKAENKA KK++ V AWEN
Sbjct: 79  PVEEPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWEN 138

Query: 130 SRKASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEET 189
           S+KA+VEA+LKKIEE LEKKKAEY E+MKN++A +HK AEE+RA+IEA RGED+LKAEET
Sbjct: 139 SKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEET 198

Query: 190 AAKYRATGTAPKKLFGCF 197
           AAKYRATG  PK   GCF
Sbjct: 199 AAKYRATGIVPKATCGCF 212

[Close]

BLAST of Carg08416 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.7e-44
Identity = 110/191 (57.59%), Postives = 135/191 (70.68%), Query Frame = 0


Query: 7   NPVTAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKVSEPDEP 66
           +P   AP   P P      AP +VA+EK   PPP         +SKAL +VEK  E   P
Sbjct: 14  SPAVLAPAKEPTP------APVEVADEKIHNPPPV--------ESKALAVVEKPIEEHTP 73

Query: 67  -KSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKASVE 126
            K++ GS +RD +LA +  EK+ S IKAWEESEKSKAEN+A KK+S V AWENS+KA+VE
Sbjct: 74  KKASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVE 133

Query: 127 AELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKYRAT 186
           A+L+KIEE LEKKKA+Y EKMKN++A +HK AEEKRA++EA +GE+LLKAEE  AKYRAT
Sbjct: 134 AQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRAT 190

Query: 187 GTAPKKLFGCF 197
           G  PK   GCF
Sbjct: 194 GVVPKATCGCF 190

[Close]

BLAST of Carg08416 vs. ExPASy Swiss-Prot
Match: Q7XII4 (Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.6e-09
Identity = 45/129 (34.88%), Postives = 67/129 (51.94%), Query Frame = 0


Query: 63  PDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKA 122
           P +  S  G    +  + +V  E+  S I AW+ +E +K  N+  ++   +  WE  +  
Sbjct: 184 PGDVSSAGGGHGDEVSVGQVKKEEVESKIAAWQIAEVAKVNNRFKREEVVINGWEGDQVE 243

Query: 123 SVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKY 182
              A LKK E  LE+K+A+ +EK +N +A   + AEEKRA  EA RG  + +  E A   
Sbjct: 244 KANAWLKKYERKLEEKRAKAMEKAQNEVAKARRKAEEKRASAEAKRGTKVARVLELANFM 303

Query: 183 RATGTAPKK 192
           RA G AP K
Sbjct: 304 RAVGRAPSK 312

[Close]

BLAST of Carg08416 vs. ExPASy TrEMBL
Match: A0A6J1H1B9 (remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111459182 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 6.5e-92
Identity = 193/196 (98.47%), Postives = 194/196 (98.98%), Query Frame = 0


Query: 1   MADASNNPVTAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MADASNNP +AAPPSNPPPQPAEEEA KDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV
Sbjct: 1   MADASNNPESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
           SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR
Sbjct: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA
Sbjct: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180

Query: 181 KYRATGTAPKKLFGCF 197
           KYRATGTAPKKLFGCF
Sbjct: 181 KYRATGTAPKKLFGCF 196

[Close]

BLAST of Carg08416 vs. ExPASy TrEMBL
Match: A0A6J1K1B5 (remorin-like OS=Cucurbita maxima OX=3661 GN=LOC111490815 PE=3 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.7e-90
Identity = 190/196 (96.94%), Postives = 192/196 (97.96%), Query Frame = 0


Query: 1   MADASNNPVTAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MADASNNP +AAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALV VE+ 
Sbjct: 1   MADASNNPESAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVPVEQY 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
           SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR
Sbjct: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEE AA
Sbjct: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEEMAA 180

Query: 181 KYRATGTAPKKLFGCF 197
           KYRATGTAPKKLFGCF
Sbjct: 181 KYRATGTAPKKLFGCF 196

[Close]

BLAST of Carg08416 vs. ExPASy TrEMBL
Match: A0A1S3CPW1 (remorin OS=Cucumis melo OX=3656 GN=LOC103503454 PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 8.8e-73
Identity = 165/196 (84.18%), Postives = 175/196 (89.29%), Query Frame = 0


Query: 1   MADASNNPVTAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MA+ S   + + PPS+PPP P  EE PKDVAEEK+VIPPPP   EDK DDSKALVLVEKV
Sbjct: 1   MAEESKK-IESPPPSDPPP-PPPEELPKDVAEEKSVIPPPP---EDKTDDSKALVLVEKV 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
            E  +PKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSV AWENS+
Sbjct: 61  PEVADPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVAAWENSK 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKK EY+EKMKN+IALLHKSAEEKRA+IEA RGEDLLKAEETAA
Sbjct: 121 KASVEAELKKIEESLEKKKGEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAA 180

Query: 181 KYRATGTAPKKLFGCF 197
           KYRATGTAPKKL GCF
Sbjct: 181 KYRATGTAPKKLLGCF 191

[Close]

BLAST of Carg08416 vs. ExPASy TrEMBL
Match: A0A6J1DYY5 (remorin-like OS=Momordica charantia OX=3673 GN=LOC111025889 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 2.0e-72
Identity = 164/199 (82.41%), Postives = 173/199 (86.93%), Query Frame = 0


Query: 1   MADASNNPVTAAPPSNPPPQPAEEEAPKDVAEEKAVI--PPPPPPVEDKP-DDSKALVLV 60
           MA+ S NP +  PP+        EE PKDVAEEK VI  PPPPPP EDKP DDSKALVLV
Sbjct: 1   MAEESKNPESTPPPA--------EEVPKDVAEEKTVIPPPPPPPPAEDKPADDSKALVLV 60

Query: 61  EKVSEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWE 120
           EKV E  EPKS EGSVNRD VLAKVATEKR+SLIKAWEESEKSKAENKAHKKLSSVVAWE
Sbjct: 61  EKVPEAAEPKSAEGSVNRDTVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWE 120

Query: 121 NSRKASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEE 180
           NS+KASVEAELKKIEESLEKKKAEY+EKMKN+IALLHK+AEEKRA+IEA RGEDLLKAEE
Sbjct: 121 NSKKASVEAELKKIEESLEKKKAEYIEKMKNKIALLHKTAEEKRAIIEAKRGEDLLKAEE 180

Query: 181 TAAKYRATGTAPKKLFGCF 197
           TAAKYRATGTAPKKL GCF
Sbjct: 181 TAAKYRATGTAPKKLLGCF 191

[Close]

BLAST of Carg08416 vs. ExPASy TrEMBL
Match: A0A6J1GJE1 (remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111454820 PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 5.3e-70
Identity = 159/194 (81.96%), Postives = 169/194 (87.11%), Query Frame = 0


Query: 11  AAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPP--------PVEDKPDDSKALVLVEKVSE 70
           + PPS+PPP P  +E PKDVAEEK VIPPPPP        P E K DDSKALVLVEKV E
Sbjct: 5   STPPSDPPP-PPPQELPKDVAEEKTVIPPPPPSAPVPAPTPAEHKTDDSKALVLVEKVPE 64

Query: 71  PDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKA 130
             E KS+EGSVNRDAVLAKVATEKR+SLIKAWEESEKSKAENKAHKKLSSVVAWENSRKA
Sbjct: 65  AGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKA 124

Query: 131 SVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKY 190
           SVEAELKKIEE+LEKKKAEY+EKMKN+IALLHK AEEKRA+IEA RGE+LLKAEETAAKY
Sbjct: 125 SVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKY 184

Query: 191 RATGTAPKKLFGCF 197
           RATGTAPKKL  CF
Sbjct: 185 RATGTAPKKLLSCF 197

[Close]

BLAST of Carg08416 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein )

HSP 1 Score: 206.8 bits (525), Expect = 1.5e-53
Identity = 129/193 (66.84%), Postives = 153/193 (79.27%), Query Frame = 0


Query: 10  TAAPPSNPPPQPAEE-EAPKDVA-EEKAVIPPP----PPPVEDKPDDSKALV-LVEKVSE 69
           T + P+  P  P E+  A  DVA +EK V PPP    P P E+K +DSKA+V +V KV E
Sbjct: 12  TVSEPTPTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQEDSKAIVPVVPKVEE 71

Query: 70  PDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKA 129
               +  EGSVNRDAVLA+V TEKR+SLIKAWEE+EK K ENKA KKLSS+ +WEN++KA
Sbjct: 72  ----EKKEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKA 131

Query: 130 SVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKY 189
           +VEAELKK+EE LEKKKAEYVE+MKN+IA +HK AEEKRA+IEA RGE++LKAEE AAKY
Sbjct: 132 AVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKY 191

Query: 190 RATGTAPKKLFGC 196
           RATGTAPKKLFGC
Sbjct: 192 RATGTAPKKLFGC 200

[Close]

BLAST of Carg08416 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein )

HSP 1 Score: 206.5 bits (524), Expect = 2.0e-53
Identity = 128/192 (66.67%), Postives = 152/192 (79.17%), Query Frame = 0


Query: 10  TAAPPSNPPPQPAEE-EAPKDVA-EEKAVIPPP----PPPVEDKPDDSKALVLVEKVSEP 69
           T + P+  P  P E+  A  DVA +EK V PPP    P P E+K +DSKA+V V  V + 
Sbjct: 12  TVSEPTPTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQEDSKAIVPV--VPKE 71

Query: 70  DEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKAS 129
            E +  EGSVNRDAVLA+V TEKR+SLIKAWEE+EK K ENKA KKLSS+ +WEN++KA+
Sbjct: 72  VEEEKKEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAA 131

Query: 130 VEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKYR 189
           VEAELKK+EE LEKKKAEYVE+MKN+IA +HK AEEKRA+IEA RGE++LKAEE AAKYR
Sbjct: 132 VEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYR 191

Query: 190 ATGTAPKKLFGC 196
           ATGTAPKKLFGC
Sbjct: 192 ATGTAPKKLFGC 201

[Close]

BLAST of Carg08416 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein )

HSP 1 Score: 198.7 bits (504), Expect = 4.2e-51
Identity = 117/173 (67.63%), Postives = 133/173 (76.88%), Query Frame = 0


Query: 24  EEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKVSEPDEPKSTEGSVNRDAVLAKVA 83
           EE  K +  E     P PP  E+K DDSKA+VLV    EP E K   GSV+RDAVL ++ 
Sbjct: 4   EEQKKVIMPEAVASEPSPPSKEEKSDDSKAIVLVVAAKEPTEDKKV-GSVHRDAVLVRLE 63

Query: 84  TEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKASVEAELKKIEESLEKKKAEYV 143
            +KR+SLIKAWEE+EKSK ENKA KK+SSV AWENS+KASVEAELKKIEE L KKKA Y 
Sbjct: 64  QDKRISLIKAWEEAEKSKVENKAQKKISSVGAWENSKKASVEAELKKIEEQLNKKKAHYT 123

Query: 144 EKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKYRATGTAPKKLFGCF 197
           E+MKN+IA +HK AEEKRA+ EA RGED+LKAEE AAKYRATGTAP KLFG F
Sbjct: 124 EQMKNKIAQIHKEAEEKRAMTEAKRGEDVLKAEEMAAKYRATGTAPTKLFGFF 175

[Close]

BLAST of Carg08416 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein )

HSP 1 Score: 197.2 bits (500), Expect = 1.2e-50
Identity = 123/198 (62.12%), Postives = 142/198 (71.72%), Query Frame = 0


Query: 10  TAAPPSNPPPQPAEEEAP----------KDVAEEKAVIPPPPPPVEDKPDDSKALVLVEK 69
           T AP   P P PAE  AP          KDVAEEK   PPP    E   DDSKAL +VEK
Sbjct: 19  TPAPADTPAPAPAEIPAPAPAPTPADVTKDVAEEKIQNPPP----EQIFDDSKALTVVEK 78

Query: 70  -VSEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWEN 129
            V EP   K    S++RD  LA ++ EKRLS ++AWEESEKSKAENKA KK++ V AWEN
Sbjct: 79  PVEEPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWEN 138

Query: 130 SRKASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEET 189
           S+KA+VEA+LKKIEE LEKKKAEY E+MKN++A +HK AEE+RA+IEA RGED+LKAEET
Sbjct: 139 SKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEET 198

Query: 190 AAKYRATGTAPKKLFGCF 197
           AAKYRATG  PK   GCF
Sbjct: 199 AAKYRATGIVPKATCGCF 212

[Close]

BLAST of Carg08416 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein )

HSP 1 Score: 179.5 bits (454), Expect = 2.6e-45
Identity = 110/191 (57.59%), Postives = 135/191 (70.68%), Query Frame = 0


Query: 7   NPVTAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKVSEPDEP 66
           +P   AP   P P      AP +VA+EK   PPP         +SKAL +VEK  E   P
Sbjct: 14  SPAVLAPAKEPTP------APVEVADEKIHNPPPV--------ESKALAVVEKPIEEHTP 73

Query: 67  -KSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKASVE 126
            K++ GS +RD +LA +  EK+ S IKAWEESEKSKAEN+A KK+S V AWENS+KA+VE
Sbjct: 74  KKASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVE 133

Query: 127 AELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKYRAT 186
           A+L+KIEE LEKKKA+Y EKMKN++A +HK AEEKRA++EA +GE+LLKAEE  AKYRAT
Sbjct: 134 AQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRAT 190

Query: 187 GTAPKKLFGCF 197
           G  PK   GCF
Sbjct: 194 GVVPKATCGCF 190

The following BLAST results are available for this feature:

BLAST of Carg08416 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035629.1	1.1e-93	100.00	hypothetical protein SDJN02_02427 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6605721.1	1.2e-92	98.98	hypothetical protein SDJN03_03038, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023532341.1	1.6e-92	98.98	remorin-like [Cucurbita pepo subsp. pepo]	[more]
XP_022957725.1	1.3e-91	98.47	remorin-like [Cucurbita moschata]	[more]
XP_022995196.1	5.6e-90	96.94	remorin-like [Cucurbita maxima]	[more]

BLAST of Carg08416 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93788	1.3e-57	69.65	Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1	[more]
Q9FFA5	2.8e-52	66.67	Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1	[more]
Q9M2D8	1.7e-49	62.12	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 P...	[more]
O80837	3.7e-44	57.59	Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1	[more]
Q7XII4	6.6e-09	34.88	Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1	[more]

BLAST of Carg08416 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H1B9	6.5e-92	98.47	remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111459182 PE=3 SV=1	[more]
A0A6J1K1B5	2.7e-90	96.94	remorin-like OS=Cucurbita maxima OX=3661 GN=LOC111490815 PE=3 SV=1	[more]
A0A1S3CPW1	8.8e-73	84.18	remorin OS=Cucumis melo OX=3656 GN=LOC103503454 PE=3 SV=1	[more]
A0A6J1DYY5	2.0e-72	82.41	remorin-like OS=Momordica charantia OX=3673 GN=LOC111025889 PE=3 SV=1	[more]
A0A6J1GJE1	5.3e-70	81.96	remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111454820 PE=3 SV=1	[more]

BLAST of Carg08416 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23750.2	1.5e-53	66.84	Remorin family protein	[more]
AT5G23750.1	2.0e-53	66.67	Remorin family protein	[more]
AT3G48940.1	4.2e-51	67.63	Remorin family protein	[more]
AT3G61260.1	1.2e-50	62.12	Remorin family protein	[more]
AT2G45820.1	2.6e-45	57.59	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 121..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..71
None	No IPR available	PANTHER	PTHR31775	OS02G0117200 PROTEIN	coord: 11..196
None	No IPR available	PANTHER	PTHR31775:SF5	REMORIN 1.4	coord: 11..196
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 86..191 e-value: 1.7E-31 score: 108.2
IPR005518	Remorin, N-terminal	PFAM	PF03766	Remorin_N	coord: 28..82 e-value: 1.3E-22 score: 79.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08416-RA	Carg08416-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010033	response to organic substance
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0006950	response to stress