Carg08414 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08414
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	C2 NT-type domain-containing protein
Location	Carg_Chr02: 5870596 .. 5871802 (+)
RNA-Seq Expression	Carg08414
Synteny	Carg08414

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCACCGCCAGCCTTTTCGGCCAAAACTAAACCATATTGCACTTCAGCGTTGTTCCTTCCAACGCTGTACTGCGGCATTGTCTGATAGCCGCCCGCCATGGCAGAGAAGCTTCTCAGTTCTCCTTCCCTATAACTAGTTTCTCTCCTCATCTTTGCCATCTCCTCTAATGAACCTGCTCTAAGCCCACAAAATTTAATTTTTACAGGCCCCCAGCTTTTATTGCTGCTTTCTGGATTTTCCTATCTTGCAGCGACCAGGGAGGACAGAATTAATTCCGGTTCAAACCAGAATAAGTTATCACTACCCCATCAAGTTCTACACAACATTGTATATTCGTATATTCCATCGATTAGAGGTTTTCCTTGTCTGAGATCTAGAACAGAACTGAAACAATGTTCAAATCATGGAGCAAGAAGCAGAAGATCAAAGCTGTATTCAAATTACAGTTCCAGGCAACTCAGGTATTGATTTTGCAGGCCGGAGGGGATAGCTACATTTTTCTCTGCTCAACATGAAATGTCTTCTTCTACCCGAAATTTTTTATTTTCCTGTCAATTAGTTATAAATTTTCTACCCCTTCTAAAGAGATTAAAAGCTGATGCAAGAGAGTTTGTTTGTGTCAATGTGTACGAGTGTGGTTTGTGATAAATGAAGGGAGAGGGACAAGATCTTACTTGATAATATTGATCTTCATTCAGGTGCCGAAGTTGAAGAAATCGGCTTTGATGATATCTTTGGTGCCAGATGATGTGGGGAAGGCAACAGTGAAGCTAGAGAAAGCTGCTATTCAGGATGGAACTTGTTTCTGGGAGAATCCTATCTATGAAACAGTCAAGCTTGTTAGAGAGATAAAAACAGGAAAAATCAATGAGAAAATTTACCATTTTGTTGTTTCAACTGTAAGGCATAGCAACATAAACTTCTATATTTTCTACAACTTGCAATTAGCCATCTGGTGGGAGCAACTTGTAAAATTCTATATGTATGTGTATGCACTATGCAGGGATCATCCAAATCTGGCTTTGTAGGTGAAGCTTCGATCGACTTTGCAGATTTTGAGGCGGAGACTGAACCCATGACTGTTTCCCTACCTCTTAAGTTTGCAAACTCTGGTGCCATATTACACGTTGGTTCTCTCTATCTCTCTCCATCCGTTGTAGCTCTACCTAGCAATTTGAAGTCTAGTCAAACTTCCATTTCATTGTGA

mRNA sequence

GCACCGCCAGCCTTTTCGGCCAAAACTAAACCATATTGCACTTCAGCGTTGTTCCTTCCAACGCTGTACTGCGGCATTGTCTGATAGCCGCCCGCCATGGCAGAGAAGCTTCTCAGTTCTCCTTCCCTATAACTAGTTTCTCTCCTCATCTTTGCCATCTCCTCTAATGAACCTGCTCTAAGCCCACAAAATTTAATTTTTACAGGCCCCCAGCTTTTATTGCTGCTTTCTGGATTTTCCTATCTTGCAGCGACCAGGGAGGACAGAATTAATTCCGGTTCAAACCAGAATAAGTTATCACTACCCCATCAAGTTCTACACAACATTGTATATTCGTATATTCCATCGATTAGAGGTTTTCCTTGTCTGAGATCTAGAACAGAACTGAAACAATGTTCAAATCATGGAGCAAGAAGCAGAAGATCAAAGCTGTATTCAAATTACAGTTCCAGGCAACTCAGGTGCCGAAGTTGAAGAAATCGGCTTTGATGATATCTTTGGTGCCAGATGATGTGGGGAAGGCAACAGTGAAGCTAGAGAAAGCTGCTATTCAGGATGGAACTTGTTTCTGGGAGAATCCTATCTATGAAACAGTCAAGCTTGTTAGAGAGATAAAAACAGGAAAAATCAATGAGAAAATTTACCATTTTGTTGTTTCAACTGGATCATCCAAATCTGGCTTTGTAGGTGAAGCTTCGATCGACTTTGCAGATTTTGAGGCGGAGACTGAACCCATGACTGTTTCCCTACCTCTTAAGTTTGCAAACTCTGGTGCCATATTACACGTTGGTTCTCTCTATCTCTCTCCATCCGTTGTAGCTCTACCTAGCAATTTGAAGTCTAGTCAAACTTCCATTTCATTGTGA

Coding sequence (CDS)

ATGTTCAAATCATGGAGCAAGAAGCAGAAGATCAAAGCTGTATTCAAATTACAGTTCCAGGCAACTCAGGTGCCGAAGTTGAAGAAATCGGCTTTGATGATATCTTTGGTGCCAGATGATGTGGGGAAGGCAACAGTGAAGCTAGAGAAAGCTGCTATTCAGGATGGAACTTGTTTCTGGGAGAATCCTATCTATGAAACAGTCAAGCTTGTTAGAGAGATAAAAACAGGAAAAATCAATGAGAAAATTTACCATTTTGTTGTTTCAACTGGATCATCCAAATCTGGCTTTGTAGGTGAAGCTTCGATCGACTTTGCAGATTTTGAGGCGGAGACTGAACCCATGACTGTTTCCCTACCTCTTAAGTTTGCAAACTCTGGTGCCATATTACACGTTGGTTCTCTCTATCTCTCTCCATCCGTTGTAGCTCTACCTAGCAATTTGAAGTCTAGTCAAACTTCCATTTCATTGTGA

Protein sequence

MFKSWSKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFWENPIYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLPLKFANSGAILHVGSLYLSPSVVALPSNLKSSQTSISL

Homology

[Close]

BLAST of Carg08414 vs. NCBI nr
Match: KAG7035631.1 (hypothetical protein SDJN02_02429 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 300.4 bits (768), Expect = 8.8e-78
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MFKSWSKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW 60
           MFKSWSKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW
Sbjct: 1   MFKSWSKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW 60

Query: 61  ENPIYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP 120
           ENPIYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP
Sbjct: 61  ENPIYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP 120

Query: 121 LKFANSGAILHVGSLYLSPSVVALPSNLKSSQTSISL 158
           LKFANSGAILHVGSLYLSPSVVALPSNLKSSQTSISL
Sbjct: 121 LKFANSGAILHVGSLYLSPSVVALPSNLKSSQTSISL 157

[Close]

BLAST of Carg08414 vs. NCBI nr
Match: KAG7011499.1 (hypothetical protein SDJN02_26405, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 261.2 bits (666), Expect = 5.9e-66
Identity = 133/138 (96.38%), Postives = 135/138 (97.83%), Query Frame = 0


Query: 1   MFKSWSKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW 60
           MFKSWSKKQKIKAVFKLQFQAT+VPKLKK ALMISLVPDDVGKATVKLEKAAIQDGTC W
Sbjct: 1   MFKSWSKKQKIKAVFKLQFQATEVPKLKKPALMISLVPDDVGKATVKLEKAAIQDGTCVW 60

Query: 61  ENPIYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP 120
           ENP+YETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP
Sbjct: 61  ENPVYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP 120

Query: 121 LKFANSGAILHVGSLYLS 139
           LKFANSGAILHVGSLY S
Sbjct: 121 LKFANSGAILHVGSLYFS 138

[Close]

BLAST of Carg08414 vs. NCBI nr
Match: XP_023532939.1 (myosin-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.7 bits (657), Expect = 6.6e-65
Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MFKSWSKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW 60
           MFKSWSKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW
Sbjct: 1   MFKSWSKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW 60

Query: 61  ENPIYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP 120
           ENP+YETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP
Sbjct: 61  ENPVYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP 120

Query: 121 LKFANSGAILHV 133
           LKFANSGAILHV
Sbjct: 121 LKFANSGAILHV 132

[Close]

BLAST of Carg08414 vs. NCBI nr
Match: KAG6605723.1 (hypothetical protein SDJN03_03040, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 257.7 bits (657), Expect = 6.6e-65
Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MFKSWSKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW 60
           MFKSWSKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW
Sbjct: 1   MFKSWSKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW 60

Query: 61  ENPIYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP 120
           ENP+YETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP
Sbjct: 61  ENPVYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP 120

Query: 121 LKFANSGAILHV 133
           LKFANSGAILHV
Sbjct: 121 LKFANSGAILHV 132

[Close]

BLAST of Carg08414 vs. NCBI nr
Match: XP_022957719.1 (myosin-1-like [Cucurbita moschata])

HSP 1 Score: 256.1 bits (653), Expect = 1.9e-64
Identity = 130/132 (98.48%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MFKSWSKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW 60
           MFKSWSKKQKIKAVFKLQF+ATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW
Sbjct: 1   MFKSWSKKQKIKAVFKLQFRATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW 60

Query: 61  ENPIYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP 120
           ENP+YETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP
Sbjct: 61  ENPVYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP 120

Query: 121 LKFANSGAILHV 133
           LKFANSGAILHV
Sbjct: 121 LKFANSGAILHV 132

[Close]

BLAST of Carg08414 vs. ExPASy TrEMBL
Match: A0A6J1H2T3 (myosin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111459178 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 9.2e-65
Identity = 130/132 (98.48%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MFKSWSKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW 60
           MFKSWSKKQKIKAVFKLQF+ATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW
Sbjct: 1   MFKSWSKKQKIKAVFKLQFRATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW 60

Query: 61  ENPIYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP 120
           ENP+YETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP
Sbjct: 61  ENPVYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP 120

Query: 121 LKFANSGAILHV 133
           LKFANSGAILHV
Sbjct: 121 LKFANSGAILHV 132

[Close]

BLAST of Carg08414 vs. ExPASy TrEMBL
Match: A0A6J1K2N8 (early endosome antigen 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491168 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.6e-64
Identity = 128/132 (96.97%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MFKSWSKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW 60
           MFKSWSKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW
Sbjct: 1   MFKSWSKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW 60

Query: 61  ENPIYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP 120
           ENP+YETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEAS+DFADFEAETEP+TVSLP
Sbjct: 61  ENPVYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASVDFADFEAETEPITVSLP 120

Query: 121 LKFANSGAILHV 133
           LKFANSGAILH+
Sbjct: 121 LKFANSGAILHI 132

[Close]

BLAST of Carg08414 vs. ExPASy TrEMBL
Match: A0A6J1JZR0 (early endosome antigen 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491168 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.6e-64
Identity = 128/132 (96.97%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MFKSWSKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW 60
           MFKSWSKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW
Sbjct: 1   MFKSWSKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW 60

Query: 61  ENPIYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP 120
           ENP+YETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEAS+DFADFEAETEP+TVSLP
Sbjct: 61  ENPVYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASVDFADFEAETEPITVSLP 120

Query: 121 LKFANSGAILHV 133
           LKFANSGAILH+
Sbjct: 121 LKFANSGAILHI 132

[Close]

BLAST of Carg08414 vs. ExPASy TrEMBL
Match: A0A6J1I6U5 (interaptin-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470530 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.7e-63
Identity = 128/132 (96.97%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MFKSWSKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW 60
           MFKSWSKKQKIKAVFKLQFQAT+VPKLKK ALMISLVPDDVGKATVKLEKAAIQDGTC W
Sbjct: 1   MFKSWSKKQKIKAVFKLQFQATEVPKLKKPALMISLVPDDVGKATVKLEKAAIQDGTCVW 60

Query: 61  ENPIYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP 120
           ENP+YETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP
Sbjct: 61  ENPVYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP 120

Query: 121 LKFANSGAILHV 133
           LKFANSGAILHV
Sbjct: 121 LKFANSGAILHV 132

[Close]

BLAST of Carg08414 vs. ExPASy TrEMBL
Match: A0A6J1I4A8 (interaptin-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470530 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.7e-63
Identity = 128/132 (96.97%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MFKSWSKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFW 60
           MFKSWSKKQKIKAVFKLQFQAT+VPKLKK ALMISLVPDDVGKATVKLEKAAIQDGTC W
Sbjct: 1   MFKSWSKKQKIKAVFKLQFQATEVPKLKKPALMISLVPDDVGKATVKLEKAAIQDGTCVW 60

Query: 61  ENPIYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP 120
           ENP+YETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP
Sbjct: 61  ENPVYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLP 120

Query: 121 LKFANSGAILHV 133
           LKFANSGAILHV
Sbjct: 121 LKFANSGAILHV 132

[Close]

BLAST of Carg08414 vs. TAIR 10
Match: AT5G52280.1 (Myosin heavy chain-related protein )

HSP 1 Score: 202.6 bits (514), Expect = 2.3e-52
Identity = 102/133 (76.69%), Postives = 118/133 (88.72%), Query Frame = 0


Query: 1   MFKSW-SKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCF 60
           MFKSW + K KIKAVFKLQFQATQVPKLKK+ALMISLVPDDVGK T KLEK+ +++G C 
Sbjct: 1   MFKSWRNDKNKIKAVFKLQFQATQVPKLKKTALMISLVPDDVGKPTFKLEKSEVKEGICS 60

Query: 61  WENPIYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSL 120
           WENPIY +VKL++E KTG + EKIYHFVV+TGSSKSGF+GEASIDFADF  E +P+TVSL
Sbjct: 61  WENPIYVSVKLIKEPKTGIVREKIYHFVVATGSSKSGFLGEASIDFADFLTEADPLTVSL 120

Query: 121 PLKFANSGAILHV 133
           PLKFANSGA+L+V
Sbjct: 121 PLKFANSGAVLNV 133

[Close]

BLAST of Carg08414 vs. TAIR 10
Match: AT5G41140.1 (Myosin heavy chain-related protein )

HSP 1 Score: 151.4 bits (381), Expect = 6.2e-37
Identity = 82/137 (59.85%), Postives = 102/137 (74.45%), Query Frame = 0


Query: 1   MFKS--W--SKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDG 60
           MFKS  W   K  KIK VFKLQF ATQV +LK   L IS+VP DVGK+T K EKA + DG
Sbjct: 1   MFKSSRWRSEKSNKIKIVFKLQFHATQVTQLKAEGLTISVVPGDVGKSTGKAEKAMVLDG 60

Query: 61  TCFWENPIYETVKLVREIKTGKINEKIYHFVVS-TGSSKSGFVGEASIDFADFEAETEPM 120
            C WE+P+YETVK ++++KTGK+N++IYH V+S TGS+KSG VGE SIDFAD+    +  
Sbjct: 61  HCRWESPVYETVKFLQDVKTGKVNQRIYHLVMSTTGSTKSGVVGETSIDFADYVDAIKTC 120

Query: 121 TVSLPLKFANSGAILHV 133
            VSLPL+ +NS A+LHV
Sbjct: 121 NVSLPLQNSNSKAMLHV 137

[Close]

BLAST of Carg08414 vs. TAIR 10
Match: AT5G41140.2 (Myosin heavy chain-related protein )

HSP 1 Score: 151.4 bits (381), Expect = 6.2e-37
Identity = 82/137 (59.85%), Postives = 102/137 (74.45%), Query Frame = 0


Query: 1   MFKS--W--SKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDG 60
           MFKS  W   K  KIK VFKLQF ATQV +LK   L IS+VP DVGK+T K EKA + DG
Sbjct: 1   MFKSSRWRSEKSNKIKIVFKLQFHATQVTQLKAEGLTISVVPGDVGKSTGKAEKAMVLDG 60

Query: 61  TCFWENPIYETVKLVREIKTGKINEKIYHFVVS-TGSSKSGFVGEASIDFADFEAETEPM 120
            C WE+P+YETVK ++++KTGK+N++IYH V+S TGS+KSG VGE SIDFAD+    +  
Sbjct: 61  HCRWESPVYETVKFLQDVKTGKVNQRIYHLVMSTTGSTKSGVVGETSIDFADYVDAIKTC 120

Query: 121 TVSLPLKFANSGAILHV 133
            VSLPL+ +NS A+LHV
Sbjct: 121 NVSLPLQNSNSKAMLHV 137

[Close]

BLAST of Carg08414 vs. TAIR 10
Match: AT1G63300.1 (Myosin heavy chain-related protein )

HSP 1 Score: 143.7 bits (361), Expect = 1.3e-34
Identity = 73/136 (53.68%), Postives = 100/136 (73.53%), Query Frame = 0


Query: 1   MFKS--W-SKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGT 60
           MFKS  W S+K +IK VF+L+F ATQ  +     L++SLVP D+GK T + EKA + DG 
Sbjct: 1   MFKSARWRSEKNRIKVVFRLKFHATQASQFNTEGLILSLVPGDIGKPTARSEKAIVNDGH 60

Query: 61  CFWENPIYETVKLVREIKTGKINEKIYHFVVS-TGSSKSGFVGEASIDFADFEAETEPMT 120
           C WE P+YETVK ++++KTGK+N++IYH +VS TGS++ G VGE SIDFAD+   T+   
Sbjct: 61  CRWEIPVYETVKFLKDVKTGKVNQRIYHLIVSTTGSARGGLVGETSIDFADYVDATKTCN 120

Query: 121 VSLPLKFANSGAILHV 133
           VSLPL+ ++S A+LHV
Sbjct: 121 VSLPLQNSSSKALLHV 136

[Close]

BLAST of Carg08414 vs. TAIR 10
Match: AT1G22060.1 (LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G22000.1); Has 84739 Blast hits to 38714 proteins in 2257 species: Archae - 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706; Plants - 4675; Viruses - 308; Other Eukaryotes - 18553 (source: NCBI BLink). )

HSP 1 Score: 117.5 bits (293), Expect = 9.9e-27
Identity = 58/126 (46.03%), Postives = 85/126 (67.46%), Query Frame = 0


Query: 7   KKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFWENPIYE 66
           +K K+K VF+LQF AT VP+     L IS +P D  KAT K  KA +++GTC W +PIYE
Sbjct: 10  EKAKVKVVFRLQFHATHVPQAGWDKLFISFIPADSVKATAKTTKALVRNGTCKWGDPIYE 69

Query: 67  TVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLPLKFANS 126
           T +L+++ +T + +EK+Y  VV+ G+S+S  +GEA I+ A++    +P  V LPL+  + 
Sbjct: 70  TTRLLQDTRTKQFDEKLYKIVVAMGTSRSSILGEAMINLAEYADALKPFAVILPLQGCDP 129

Query: 127 GAILHV 133
           GAILHV
Sbjct: 130 GAILHV 135

The following BLAST results are available for this feature:

BLAST of Carg08414 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035631.1	8.8e-78	100.00	hypothetical protein SDJN02_02429 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG7011499.1	5.9e-66	96.38	hypothetical protein SDJN02_26405, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023532939.1	6.6e-65	99.24	myosin-1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6605723.1	6.6e-65	99.24	hypothetical protein SDJN03_03040, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022957719.1	1.9e-64	98.48	myosin-1-like [Cucurbita moschata]	[more]

BLAST of Carg08414 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg08414 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H2T3	9.2e-65	98.48	myosin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111459178 PE=4 SV=1	[more]
A0A6J1K2N8	1.6e-64	96.97	early endosome antigen 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1JZR0	1.6e-64	96.97	early endosome antigen 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1I6U5	1.7e-63	96.97	interaptin-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470530 PE=4 SV=1	[more]
A0A6J1I4A8	1.7e-63	96.97	interaptin-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470530 PE=4 SV=1	[more]

BLAST of Carg08414 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52280.1	2.3e-52	76.69	Myosin heavy chain-related protein	[more]
AT5G41140.1	6.2e-37	59.85	Myosin heavy chain-related protein	[more]
AT5G41140.2	6.2e-37	59.85	Myosin heavy chain-related protein	[more]
AT1G63300.1	1.3e-34	53.68	Myosin heavy chain-related protein	[more]
AT1G22060.1	9.9e-27	46.03	LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 gro...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 157..157
None	No IPR available	PANTHER	PTHR34452:SF14	BNAC08G20130D PROTEIN	coord: 1..132
None	No IPR available	PANTHER	PTHR34452	MYOSIN HEAVY CHAIN-RELATED PROTEIN	coord: 1..132
IPR019448	NT-type C2 domain	PFAM	PF10358	NT-C2	coord: 7..133 e-value: 9.8E-17 score: 61.0
IPR019448	NT-type C2 domain	PROSITE	PS51840	C2_NT	coord: 3..138 score: 21.028349

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08414-RA	Carg08414-RA	mRNA