Carg08387 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08387
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	nifU-like protein 3, chloroplastic
Location	Carg_Chr05: 3883631 .. 3886326 (-)
RNA-Seq Expression	Carg08387
Synteny	Carg08387

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCAATTTCCATCCACAAAATTTGGCCACACCAATGACGATCTTCATCTTTATCACCCAATCACTGTGTTTCCCTTCTGCAAAATTCATAACCCAAACACAATGCCCTAACTCAGCACCGCATCCCACTGTTTATGAGTCTTCATAGCTCGCATTCCAATGGTAGCCGCTTTCTCAACTCGAGCTCAAGCTCTTAAACCAACTCCAACCACTGCAACTCTGTATCGGTCACCGTCTGAGCGAACTTCGGCTTCCCATTTGTCATTCTTCAAGGTTGGTTTCTTGATTCTGTTTTTGATCTTCTGCAATTCCCTTGTTTTGTTTGTGCAAGTTTTTATTAGGCAACTGATTGGGCGGTATTGTTTGAATCAGAGTTCGTTCTTTAGAGGTCAATTTTGTCGCCGGCGCTTTCTTGGATTCAACTCAAGTTGTACTCGGAGGCGTCATTTAGGTAGCATTTCTGGATTTTGCTTTTACGATGATCCATAACGAATATGAAAATTTGGCTATTCTTGGAGTGATGGGATGATAGATTCAAGATCATGTAACAGTGTTGGATGCCATTTCTCTTCCAAATTCCAATTTCCTGCTTCTTTTCTCTACTAAATGCTTATAACTGAAACCATTAGGTTTGTAACATTCTGATTGAACTTATCCGGTATCTGTGAGATCCTACGTTGGTTGGGGAGGAGAATGAAAAATTCTTTATAAGGGCATGGAAACCTCCCCTAGCAGACGCATTTTAAATGCTAGAGAAACCCAAAAGAGAAAACCTAAAGAGGACAATATCTACTAGCGTTGGGCTTGAGCCGTTACAAATGGTATCAGAGCCAGAAACTGGGCGATTTTTTAGTGAGGAGGTGTGCCAGCAATGACGCTAGGCTTCGAAGGGGGGTGGATTGGGGAGTCTCATATCAATTGGAGAAGGGAACGAGTGCCAGCGAGAACGCTGGACCCCGAAGGGGGGTGGATTATGAGATCCCACATCAGTTGAGTTGGAGAACGAAGCATTCTTTATGAGGGTGTGGAAACCTCCCCTAGCATAGCAGACACGTTTGAAAAGCCATGAGGAGAAAGAGAAAATCCAAAGAGGACAATATCGGCTAGCGGTGGACTTAGGACGTTACAAATAGATGTGTCAGCGAGGAGGCTGAGCCCTGAAGGGGGTGGACACAAGGTGGTGTGCCAGCAAGAACACTAGGCTCCGAAGGGAGATAGATCGGGGGGTCCCACATCGATTGGAGAAGGGAACAAGTGCCAGTGAGGACGCTAGACCCCGAAGGGGGTGGATAGTGAGATCCCACATCGGATGGGGGAGGAGAACGAAACATTTTTTATAAGGGTGTGGAAACCTCCCCTAGCAGACGGCGTTTTAAATGCCTTGAGGAGAAACCCGTTCATCCTAGTTCATAGTCTCTAGTCATCCAGTTACTATAGTAAGTAAGAAACTATTAAGAACAAACTAGTAACTAAAACTAATTAACAAATTTTGACTGGAATTTGATGGGTTTTGGTGTTGGTAAGGAAACGTGGTGTCACCCAGTTGTGTTCTTCCATTGACTGAGGAAAATGTGGAGAAAGTGTTGGACGAAGTAAGGCCAAGCCTGATGGCTGATGGAGGGAATGTTGCTTTGCATGAGATAGATGGGCTTGTTGTGATATTGAAGCTTCAAGGAGCATGTGGCTCTTGCCCAAGCTCAACCATGACACTCAAAATGGGAATCGAGACCAGACTCAGAGACAAAATTCCTGAAATTTTGGAAGTTGAGCAGATCATAGACACTGAAACAGGACTTGAACTCAACCACGACAATGTTGAAAAGGTCAGATTCTCTGTTCAATTTTCTGCTATGTTACGAATTTAATAACACTTGCATAGATGATCATAGAATTTCTTTGCAACAACTTAGCTGATACACGAAGCATGCTAATTTGGTTTGTTATGAGTTCTACCTTTTTTATATGTTTAGATACTGCTCATTATATCTTCTTTGGGCCTTTCTTTCTAGACTTCCTTTCAAGATTTTAAAACGCGTCTATTAGGGAAAGGTTTCCACACAAACAATGTTTCGTTCTCCTCTCCATCCAACCGACGTAGGAATTCACAATCCACCCTCCTTGGAGACTTAGCATCATTGCTAGCACAAAACCCAGGCACTGATACCATTTGTAATGGCTCAAGCCCACCGTTAATAAATATTGTCCTCTTTAGGCTTTCTCTTTTGGACTTCCCCTCATAAAGAATGTTCCACACCCTCATAAACAATGTTTCGTTCTCCTCTTCAACTGACGTGGGATTTCACAAATCCACCCATTTGAGGCCCAGCGTTCTCGCTGATACTCGTTTTTCTCTCTAATCGATGTGGGATCTCACGCATTATTATATATATATATATATATGATCGACTAAAAAGATTAGAGGTTTGAAAGTCAGGTATGTTTTTCAGTTACTTGCAGAGATTAGGCCATACTTGGCTGGGACAGGGGGTGGAATTCTGGAGCTGATAGAGATAAAAGATTACGTTGTTAAAGTGCGGCTGAGTGGACCAGCAGCTGGAGTTATGACAGTTCGAGTTGCTCTCACACAGAAGTTGAGGGAGAAAATACCAGCCATTGCAGCTGTGCAGCTTATAGAATAGAACCAGCTTTGATTCATACACGCTCACCTCATTTTCTCTTTTCATTTCATTATTTTC

mRNA sequence

TCCCAATTTCCATCCACAAAATTTGGCCACACCAATGACGATCTTCATCTTTATCACCCAATCACTGTGTTTCCCTTCTGCAAAATTCATAACCCAAACACAATGCCCTAACTCAGCACCGCATCCCACTGTTTATGAGTCTTCATAGCTCGCATTCCAATGGTAGCCGCTTTCTCAACTCGAGCTCAAGCTCTTAAACCAACTCCAACCACTGCAACTCTGTATCGGTCACCGTCTGAGCGAACTTCGGCTTCCCATTTGTCATTCTTCAAGAGTTCGTTCTTTAGAGGTCAATTTTGTCGCCGGCGCTTTCTTGGATTCAACTCAAGTTGTACTCGGAGGCGTCATTTAGGAAACGTGGTGTCACCCAGTTGTGTTCTTCCATTGACTGAGGAAAATGTGGAGAAAGTGTTGGACGAAGTAAGGCCAAGCCTGATGGCTGATGGAGGGAATGTTGCTTTGCATGAGATAGATGGGCTTGTTGTGATATTGAAGCTTCAAGGAGCATGTGGCTCTTGCCCAAGCTCAACCATGACACTCAAAATGGGAATCGAGACCAGACTCAGAGACAAAATTCCTGAAATTTTGGAAGTTGAGCAGATCATAGACACTGAAACAGGACTTGAACTCAACCACGACAATGTTGAAAAGTTACTTGCAGAGATTAGGCCATACTTGGCTGGGACAGGGGGTGGAATTCTGGAGCTGATAGAGATAAAAGATTACGTTGTTAAAGTGCGGCTGAGTGGACCAGCAGCTGGAGTTATGACAGTTCGAGTTGCTCTCACACAGAAGTTGAGGGAGAAAATACCAGCCATTGCAGCTGTGCAGCTTATAGAATAGAACCAGCTTTGATTCATACACGCTCACCTCATTTTCTCTTTTCATTTCATTATTTTC

Coding sequence (CDS)

ATGGTAGCCGCTTTCTCAACTCGAGCTCAAGCTCTTAAACCAACTCCAACCACTGCAACTCTGTATCGGTCACCGTCTGAGCGAACTTCGGCTTCCCATTTGTCATTCTTCAAGAGTTCGTTCTTTAGAGGTCAATTTTGTCGCCGGCGCTTTCTTGGATTCAACTCAAGTTGTACTCGGAGGCGTCATTTAGGAAACGTGGTGTCACCCAGTTGTGTTCTTCCATTGACTGAGGAAAATGTGGAGAAAGTGTTGGACGAAGTAAGGCCAAGCCTGATGGCTGATGGAGGGAATGTTGCTTTGCATGAGATAGATGGGCTTGTTGTGATATTGAAGCTTCAAGGAGCATGTGGCTCTTGCCCAAGCTCAACCATGACACTCAAAATGGGAATCGAGACCAGACTCAGAGACAAAATTCCTGAAATTTTGGAAGTTGAGCAGATCATAGACACTGAAACAGGACTTGAACTCAACCACGACAATGTTGAAAAGTTACTTGCAGAGATTAGGCCATACTTGGCTGGGACAGGGGGTGGAATTCTGGAGCTGATAGAGATAAAAGATTACGTTGTTAAAGTGCGGCTGAGTGGACCAGCAGCTGGAGTTATGACAGTTCGAGTTGCTCTCACACAGAAGTTGAGGGAGAAAATACCAGCCATTGCAGCTGTGCAGCTTATAGAATAG

Protein sequence

MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCRRRFLGFNSSCTRRRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGILELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE

Homology

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BLAST of Carg08387 vs. NCBI nr
Match: KAG7029821.1 (NifU-like protein 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 435.3 bits (1118), Expect = 3.3e-118
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCRRRFLGFNSSCTR 60
           MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCRRRFLGFNSSCTR
Sbjct: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCRRRFLGFNSSCTR 60

Query: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120
           RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180

Query: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 228
           LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

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BLAST of Carg08387 vs. NCBI nr
Match: XP_022929559.1 (nifU-like protein 3, chloroplastic [Cucurbita moschata] >KAG6598879.1 NifU-like protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 433.0 bits (1112), Expect = 1.6e-117
Identity = 226/227 (99.56%), Postives = 226/227 (99.56%), Query Frame = 0


Query: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCRRRFLGFNSSCTR 60
           MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFC RRFLGFNSSCTR
Sbjct: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR 60

Query: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120
           RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180

Query: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 228
           LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

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BLAST of Carg08387 vs. NCBI nr
Match: XP_022997561.1 (nifU-like protein 3, chloroplastic [Cucurbita maxima] >XP_023545672.1 nifU-like protein 3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 430.6 bits (1106), Expect = 8.2e-117
Identity = 225/227 (99.12%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCRRRFLGFNSSCTR 60
           MVAAFSTRAQALKPTPTTA LYRSPSERTSASHLSFFKSSFFRGQFC RRFLGFNSSCTR
Sbjct: 1   MVAAFSTRAQALKPTPTTAPLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR 60

Query: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120
           RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180

Query: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 228
           LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

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BLAST of Carg08387 vs. NCBI nr
Match: XP_038889481.1 (nifU-like protein 3, chloroplastic [Benincasa hispida])

HSP 1 Score: 397.9 bits (1021), Expect = 5.9e-107
Identity = 209/227 (92.07%), Postives = 215/227 (94.71%), Query Frame = 0


Query: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCRRRFLGFNSSCTR 60
           MVAAFSTRA  LK TP  ATLY SPSE TS SHLS FK+SFFRGQFC RRFL FNSSCT+
Sbjct: 1   MVAAFSTRAHPLKSTPIAATLYCSPSEPTSPSHLSLFKTSFFRGQFCSRRFLRFNSSCTQ 60

Query: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120
           RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQI+DTETGLELN +NVEK+LAEIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLAEIRPYLAGTGGGI 180

Query: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 228
           LE+IEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

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BLAST of Carg08387 vs. NCBI nr
Match: XP_004148324.1 (nifU-like protein 3, chloroplastic isoform X2 [Cucumis sativus] >KGN61156.1 hypothetical protein Csa_021276 [Cucumis sativus])

HSP 1 Score: 391.0 bits (1003), Expect = 7.2e-105
Identity = 205/227 (90.31%), Postives = 211/227 (92.95%), Query Frame = 0


Query: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCRRRFLGFNSSCTR 60
           MVA FSTRAQ  K TP  ATLYRSPS   S S+LSFFKSSFFRGQFC R FL FNSSCTR
Sbjct: 1   MVATFSTRAQPFKSTPIAATLYRSPSHPASPSYLSFFKSSFFRGQFCSRHFLRFNSSCTR 60

Query: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120
            RHLGNVVSPSCVLPLTEENVEKVLDEVRP LMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  IRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQI+DTETGLELN +NVEK+L+EIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180

Query: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 228
           LE+IEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

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BLAST of Carg08387 vs. ExPASy Swiss-Prot
Match: Q84RQ7 (NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU3 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 6.0e-70
Identity = 142/192 (73.96%), Postives = 164/192 (85.42%), Query Frame = 0


Query: 39  SSFFRGQFCRRRF--LGFNSSCTRRRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADG 98
           S+F RGQF R  F  L       +R   G+V   SCV+PLTEENVE+VLDEVRPSLMADG
Sbjct: 48  STFLRGQFQRIHFSWLQHTRPLRKRTVFGHV---SCVMPLTEENVERVLDEVRPSLMADG 107

Query: 99  GNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQIIDTET-GL 158
           GNVALHEIDGLVV+LKLQGACGSCPSS+MTLKMGIE+RLRDKIPEI+ VEQ +++ET GL
Sbjct: 108 GNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRDKIPEIMSVEQFLESETGGL 167

Query: 159 ELNHDNVEKLLAEIRPYLAGTGGGILELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLRE 218
           ELN +N+EK+L+E+RPYL+GTGGG LEL+EI  YVVKVRL+GPAAGVMTVRVALTQKLRE
Sbjct: 168 ELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVKVRLTGPAAGVMTVRVALTQKLRE 227

Query: 219 KIPAIAAVQLIE 228
            IP+I AVQL+E
Sbjct: 228 TIPSIGAVQLLE 236

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BLAST of Carg08387 vs. ExPASy Swiss-Prot
Match: Q93W20 (NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU2 PE=1 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 9.5e-60
Identity = 130/222 (58.56%), Postives = 161/222 (72.52%), Query Frame = 0


Query: 7   TRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCRRRFLGFNSSCTRRRHLGN 66
           T  QA+ P+ +++ L   P   +S   L          +    RFL       R + +  
Sbjct: 14  TPPQAIDPSSSSSLLLPFPQILSSQRALGLVARPCNPLRRGLSRFLSSRQLFRRSKVVKA 73

Query: 67  VVSPSCVL--PLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSST 126
           V +P  +L  PLTEENVE VLDE+RP LM+DGGNVALHEIDG +V +KLQGACGSCPSST
Sbjct: 74  VATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSST 133

Query: 127 MTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGILELI 186
           MT+KMGIE RL +KIPEI+ VE + D ETGLELN +N+EK+L EIRPYL GT  G L+L+
Sbjct: 134 MTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEEIRPYLIGTADGSLDLV 193

Query: 187 EIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLI 227
           EI+D +VK+R++GPAAGVMTVRVA+TQKLREKIP+IAAVQLI
Sbjct: 194 EIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLI 235

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BLAST of Carg08387 vs. ExPASy Swiss-Prot
Match: Q84LK7 (NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=NIFU1 PE=1 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.8e-50
Identity = 122/225 (54.22%), Postives = 148/225 (65.78%), Query Frame = 0


Query: 16  PTTATLYRSPSERTSASHLSFFKSSFFRGQFCRRRFLGFNSSCTRRRHLGNVVSPSCV-- 75
           P  A    +PS  TS+S  + FK + +    CR      +S  TR     N   P  V  
Sbjct: 7   PMAAAAAVAPSTTTSSS--ASFKVAAYAWSSCR----SSSSPATRLVAAPNHQRPPLVVG 66

Query: 76  ------------LPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSCP 135
                       LPLT  NVE VLD+VRP L ADGG+VALHEI G VV LKLQGACGSCP
Sbjct: 67  AIAGLDPVTAVQLPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCP 126

Query: 136 SSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGIL 195
           SS +T+K GIE RL +KIP++  VE + D ETGLELN +NVEK+L EIRPYLAGTGGG L
Sbjct: 127 SSLITIKRGIERRLMEKIPDVAAVEPVTDKETGLELNEENVEKVLNEIRPYLAGTGGGGL 186

Query: 196 ELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLI 227
           + + IK  +VKVRL+GPAA V TVR+A+++KLREKIP+I  VQL+
Sbjct: 187 QFLMIKGPIVKVRLTGPAAVVRTVRIAVSKKLREKIPSIQIVQLL 225

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BLAST of Carg08387 vs. ExPASy Swiss-Prot
Match: Q93W77 (NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU1 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 6.9e-18
Identity = 53/141 (37.59%), Postives = 88/141 (62.41%), Query Frame = 0


Query: 76  LTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRL 135
           LT +NV+ VL++VRP L++DGGNV +  ++  VV LKLQGAC SCPSS+ T+ MGIE  L
Sbjct: 85  LTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVL 144

Query: 136 RDKIPEIL-EVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGILELIEIKDYVVKVR 195
           ++K  + L ++ Q+ D E   ++  + V   L  +RP +   GG + E++ ++     V+
Sbjct: 145 KEKFGDALKDIRQVFDEEV-KQITVEAVNAHLDILRPAIKNYGGSV-EVLSVEGEDCVVK 204

Query: 196 LSGPAAGVMTVRVALTQKLRE 216
             GP +  M ++ A+ +K ++
Sbjct: 205 YVGPESIGMGIQAAIKEKFKD 223

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BLAST of Carg08387 vs. ExPASy Swiss-Prot
Match: P33179 (Nitrogen fixation protein NifU (Fragment) OS=Anabaena sp. (strain L31) OX=29412 GN=nifU PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.1e-15
Identity = 43/69 (62.32%), Postives = 56/69 (81.16%), Query Frame = 0


Query: 81  VEKVLD-EVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKI 140
           ++KVLD EVRP L+ADGG+V L+++DG +V + LQGACGSCPSST TLK+ IE+RLRD+I
Sbjct: 44  IQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCPSSTATLKIAIESRLRDRI 103

Query: 141 PEILEVEQI 149
              L VE +
Sbjct: 104 NPSLVVEAV 112

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BLAST of Carg08387 vs. ExPASy TrEMBL
Match: A0A6J1EP39 (nifU-like protein 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111436107 PE=3 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 8.0e-118
Identity = 226/227 (99.56%), Postives = 226/227 (99.56%), Query Frame = 0


Query: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCRRRFLGFNSSCTR 60
           MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFC RRFLGFNSSCTR
Sbjct: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR 60

Query: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120
           RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180

Query: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 228
           LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of Carg08387 vs. ExPASy TrEMBL
Match: A0A6J1K7T6 (nifU-like protein 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111492451 PE=3 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 4.0e-117
Identity = 225/227 (99.12%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCRRRFLGFNSSCTR 60
           MVAAFSTRAQALKPTPTTA LYRSPSERTSASHLSFFKSSFFRGQFC RRFLGFNSSCTR
Sbjct: 1   MVAAFSTRAQALKPTPTTAPLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR 60

Query: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120
           RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180

Query: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 228
           LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of Carg08387 vs. ExPASy TrEMBL
Match: A0A0A0LMF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060370 PE=3 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 3.5e-105
Identity = 205/227 (90.31%), Postives = 211/227 (92.95%), Query Frame = 0


Query: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCRRRFLGFNSSCTR 60
           MVA FSTRAQ  K TP  ATLYRSPS   S S+LSFFKSSFFRGQFC R FL FNSSCTR
Sbjct: 1   MVATFSTRAQPFKSTPIAATLYRSPSHPASPSYLSFFKSSFFRGQFCSRHFLRFNSSCTR 60

Query: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120
            RHLGNVVSPSCVLPLTEENVEKVLDEVRP LMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  IRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQI+DTETGLELN +NVEK+L+EIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180

Query: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 228
           LE+IEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of Carg08387 vs. ExPASy TrEMBL
Match: A0A5D3BPX3 (NifU-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00910 PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.5e-103
Identity = 204/227 (89.87%), Postives = 209/227 (92.07%), Query Frame = 0


Query: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCRRRFLGFNSSCTR 60
           MVA FSTRAQ  K TP  ATLY S S  TS SHLS FKSSFFRGQFC RRFL FN SCTR
Sbjct: 1   MVATFSTRAQPFKSTPIAATLYPSSSHPTSPSHLSLFKSSFFRGQFCSRRFLRFNPSCTR 60

Query: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120
            R LGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  IRRLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQI+DTETGLELN +NVEK+L+EIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180

Query: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 228
           LE+IEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of Carg08387 vs. ExPASy TrEMBL
Match: A0A5A7U598 (NifU-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1484G00030 PE=3 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.9e-103
Identity = 203/227 (89.43%), Postives = 209/227 (92.07%), Query Frame = 0


Query: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCRRRFLGFNSSCTR 60
           MVA FSTRAQ  K TP  ATLY S S  TS SHLS FKSSFFRGQFC RRFL FN SCTR
Sbjct: 1   MVATFSTRAQPFKSTPIAATLYPSSSHPTSPSHLSLFKSSFFRGQFCSRRFLRFNPSCTR 60

Query: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120
            R LGNV+SPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  IRRLGNVISPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQI+DTETGLELN +NVEK+L+EIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180

Query: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 228
           LE+IEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of Carg08387 vs. TAIR 10
Match: AT4G25910.1 (NFU domain protein 3 )

HSP 1 Score: 265.4 bits (677), Expect = 4.2e-71
Identity = 142/192 (73.96%), Postives = 164/192 (85.42%), Query Frame = 0


Query: 39  SSFFRGQFCRRRF--LGFNSSCTRRRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADG 98
           S+F RGQF R  F  L       +R   G+V   SCV+PLTEENVE+VLDEVRPSLMADG
Sbjct: 48  STFLRGQFQRIHFSWLQHTRPLRKRTVFGHV---SCVMPLTEENVERVLDEVRPSLMADG 107

Query: 99  GNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQIIDTET-GL 158
           GNVALHEIDGLVV+LKLQGACGSCPSS+MTLKMGIE+RLRDKIPEI+ VEQ +++ET GL
Sbjct: 108 GNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRDKIPEIMSVEQFLESETGGL 167

Query: 159 ELNHDNVEKLLAEIRPYLAGTGGGILELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLRE 218
           ELN +N+EK+L+E+RPYL+GTGGG LEL+EI  YVVKVRL+GPAAGVMTVRVALTQKLRE
Sbjct: 168 ELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVKVRLTGPAAGVMTVRVALTQKLRE 227

Query: 219 KIPAIAAVQLIE 228
            IP+I AVQL+E
Sbjct: 228 TIPSIGAVQLLE 236

[Close]

BLAST of Carg08387 vs. TAIR 10
Match: AT5G49940.1 (NIFU-like protein 2 )

HSP 1 Score: 231.5 bits (589), Expect = 6.8e-61
Identity = 130/222 (58.56%), Postives = 161/222 (72.52%), Query Frame = 0


Query: 7   TRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCRRRFLGFNSSCTRRRHLGN 66
           T  QA+ P+ +++ L   P   +S   L          +    RFL       R + +  
Sbjct: 14  TPPQAIDPSSSSSLLLPFPQILSSQRALGLVARPCNPLRRGLSRFLSSRQLFRRSKVVKA 73

Query: 67  VVSPSCVL--PLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSST 126
           V +P  +L  PLTEENVE VLDE+RP LM+DGGNVALHEIDG +V +KLQGACGSCPSST
Sbjct: 74  VATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSST 133

Query: 127 MTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGILELI 186
           MT+KMGIE RL +KIPEI+ VE + D ETGLELN +N+EK+L EIRPYL GT  G L+L+
Sbjct: 134 MTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEEIRPYLIGTADGSLDLV 193

Query: 187 EIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLI 227
           EI+D +VK+R++GPAAGVMTVRVA+TQKLREKIP+IAAVQLI
Sbjct: 194 EIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLI 235

[Close]

BLAST of Carg08387 vs. TAIR 10
Match: AT5G49940.2 (NIFU-like protein 2 )

HSP 1 Score: 144.4 bits (363), Expect = 1.1e-34
Identity = 84/161 (52.17%), Postives = 106/161 (65.84%), Query Frame = 0


Query: 7   TRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCRRRFLGFNSSCTRRRHLGN 66
           T  QA+ P+ +++ L   P   +S   L          +    RFL       R + +  
Sbjct: 14  TPPQAIDPSSSSSLLLPFPQILSSQRALGLVARPCNPLRRGLSRFLSSRQLFRRSKVVKA 73

Query: 67  VVSPSCVL--PLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSST 126
           V +P  +L  PLTEENVE VLDE+RP LM+DGGNVALHEIDG +V +KLQGACGSCPSST
Sbjct: 74  VATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSST 133

Query: 127 MTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKL 166
           MT+KMGIE RL +KIPEI+ VE + D ETGLELN +N+EK+
Sbjct: 134 MTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKV 174

[Close]

BLAST of Carg08387 vs. TAIR 10
Match: AT4G01940.1 (NFU domain protein 1 )

HSP 1 Score: 92.4 bits (228), Expect = 4.9e-19
Identity = 53/141 (37.59%), Postives = 88/141 (62.41%), Query Frame = 0


Query: 76  LTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRL 135
           LT +NV+ VL++VRP L++DGGNV +  ++  VV LKLQGAC SCPSS+ T+ MGIE  L
Sbjct: 85  LTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVL 144

Query: 136 RDKIPEIL-EVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGILELIEIKDYVVKVR 195
           ++K  + L ++ Q+ D E   ++  + V   L  +RP +   GG + E++ ++     V+
Sbjct: 145 KEKFGDALKDIRQVFDEEV-KQITVEAVNAHLDILRPAIKNYGGSV-EVLSVEGEDCVVK 204

Query: 196 LSGPAAGVMTVRVALTQKLRE 216
             GP +  M ++ A+ +K ++
Sbjct: 205 YVGPESIGMGIQAAIKEKFKD 223

[Close]

BLAST of Carg08387 vs. TAIR 10
Match: AT1G51390.1 (NFU domain protein 5 )

HSP 1 Score: 56.6 bits (135), Expect = 3.0e-08
Identity = 29/67 (43.28%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 88  VRPSLMADGGNVAL--HEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEV 147
           +RPS+  DGG++     + +  +V L++QGAC  CPSS++TLK GIE  L   + E+  V
Sbjct: 199 IRPSVQDDGGDIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSEVKGV 258

Query: 148 EQIIDTE 153
           EQ  D E
Sbjct: 259 EQEFDGE 265

The following BLAST results are available for this feature:

BLAST of Carg08387 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029821.1	3.3e-118	100.00	NifU-like protein 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022929559.1	1.6e-117	99.56	nifU-like protein 3, chloroplastic [Cucurbita moschata] >KAG6598879.1 NifU-like ...	[more]
XP_022997561.1	8.2e-117	99.12	nifU-like protein 3, chloroplastic [Cucurbita maxima] >XP_023545672.1 nifU-like ...	[more]
XP_038889481.1	5.9e-107	92.07	nifU-like protein 3, chloroplastic [Benincasa hispida]	[more]
XP_004148324.1	7.2e-105	90.31	nifU-like protein 3, chloroplastic isoform X2 [Cucumis sativus] >KGN61156.1 hypo...	[more]

BLAST of Carg08387 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84RQ7	6.0e-70	73.96	NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU3 PE=2...	[more]
Q93W20	9.5e-60	58.56	NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU2 PE=1...	[more]
Q84LK7	1.8e-50	54.22	NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=N...	[more]
Q93W77	6.9e-18	37.59	NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU1 PE=1...	[more]
P33179	1.1e-15	62.32	Nitrogen fixation protein NifU (Fragment) OS=Anabaena sp. (strain L31) OX=29412 ...	[more]

BLAST of Carg08387 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EP39	8.0e-118	99.56	nifU-like protein 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111436107...	[more]
A0A6J1K7T6	4.0e-117	99.12	nifU-like protein 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111492451 P...	[more]
A0A0A0LMF5	3.5e-105	90.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060370 PE=3 SV=1	[more]
A0A5D3BPX3	1.5e-103	89.87	NifU-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G0...	[more]
A0A5A7U598	1.9e-103	89.43	NifU-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1484...	[more]

BLAST of Carg08387 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25910.1	4.2e-71	73.96	NFU domain protein 3	[more]
AT5G49940.1	6.8e-61	58.56	NIFU-like protein 2	[more]
AT5G49940.2	1.1e-34	52.17	NIFU-like protein 2	[more]
AT4G01940.1	4.9e-19	37.59	NFU domain protein 1	[more]
AT1G51390.1	3.0e-08	43.28	NFU domain protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001075	NIF system FeS cluster assembly, NifU, C-terminal	PFAM	PF01106	NifU	coord: 162..224 e-value: 4.0E-12 score: 46.1 coord: 81..146 e-value: 1.9E-26 score: 92.0
IPR034904	Fe-S cluster assembly domain superfamily	GENE3D	3.30.300.130		coord: 156..227 e-value: 2.8E-21 score: 77.4
IPR034904	Fe-S cluster assembly domain superfamily	GENE3D	3.30.300.130		coord: 73..155 e-value: 3.5E-32 score: 112.3
IPR034904	Fe-S cluster assembly domain superfamily	SUPERFAMILY	117916	Fe-S cluster assembly (FSCA) domain-like	coord: 156..226
IPR034904	Fe-S cluster assembly domain superfamily	SUPERFAMILY	117916	Fe-S cluster assembly (FSCA) domain-like	coord: 78..152
None	No IPR available	PANTHER	PTHR11178:SF25	NIFU-LIKE PROTEIN 3, CHLOROPLASTIC	coord: 16..227
None	No IPR available	PANTHER	PTHR11178	IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED	coord: 16..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08387-RA	Carg08387-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0097428	protein maturation by iron-sulfur cluster transfer
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding