Carg08360 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg08360
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr05: 3653940 .. 3661232 (-)
RNA-Seq ExpressionCarg08360
SyntenyCarg08360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCCTTTGAATTTATATCTAGAGATTTGTAATGCTGCTGCTGCGAGAGAAGTACAATCAGCAGCAAGGGAAGGTAGTATCAACCACAAACTGGCTACATTTTTTCTGTTCATTGAAATTTTATTGACGGAGATTGATGATTGTCAGGTGATGAGTTATTTCTTTTCGTATCTTTTCTTTTGAGAAGAAACAAATATGTTGATGAATGAAATCACAATATCAGGTAGGAAGAATCCATCCCCAAAGCAAACTACAGAAGATTCTTTTAGTTGCAAAGGGGGAAGGGAGAGATTTGTCCTTGAAGTTTAATTTTTTCTTTTTTTCGCCTTTGTCTGCGCCAGTCGTATAGGGTATAGGGCGATCGGACTAGGCAGAGTCAGAAAGTCTTTCATGACTCAAGGTTTATATTAGGGAAAGCAGAGTGAGGGGAAGAGGGGGCTGCCCTCGGCCCCGATCATCCTATTCTCCCCAGAGAGAGGCATGGTTCTATAGTCAAAACAATTTCGTCACTTTCATAGTGACCCTATCGGATGGCAACCCTTTCAGGGGTTCATGACTAACATCGGAGTGAATCTAAAAAAACTCGTTTTAATGATTCAAATATTATAACGAGAACCAAATAAAACAAACCAGTGAAGCAGAAATTATTCTAAAAAAGTATTTTAGTGATTTAAATATTATAATTAAGAGCTTTATTAGTAACCAAAAAGTTCTAATATGAAAAATTCTTGACTTGTTTAATCTATATAGACAGTAACAAGATCAGAACTGTGAAAATGTTTCCTTATTTCACTTCTCATTCTGTCCAGCCATCTCCAGAAAGGTAAGGCCAGAAGATGATGAAGCAAAGCAAGCGAGAGCTTGACAGAAGACAGAAAGAAATATGTAAGAAGAAACAAATGGAATAATAACAAGAAGGAAACGTTTGCAATACGATACCGATCGACACCAGCTAAGACAGAGCTTGTGCCATTATTGAGCGATGAGACAACTGTTGCTCGTAAAGCTCTCGGAAAATTCGGTATTTGGCGTCATGGTATACCTTCACCTTCGGGTTTGTAGATGGATAAATCACCTGCCAATTGAAGCAAAATTTTAATGGTAAACACTAGTCCCTGAGTAAGATCATGGGACAACAGGAAAGAACAATTTGATGCATACCTGACCAGCAGCATTCAGAGCTTTCATGGCCTCTTGCAAAGTAGAATATTTTCTAGCAGCCACAGCTCCAAGAATGGCTGCACCTAAGAGCACGGACTCGCGTTCCCGAGGTAAAATAATAGGACAACCTGCTCAATCACCAAAGTTACTCGGGTGTAAGATCTAAATGATATCAACCTACTGGAAAAAACAGTCCAAATGCTTAGTTCTGAAGGATGCACAGAAGAAAATCTTAGAAAATATCATATCGAGGGAGGAGAGGTGAAGCACAACCAGTAATATCAGCATGCTCTTGAATGAACAATGAATTCTTTGAAAGGCCACCAGATGCAAGTAAAGTGCTAATCTGTTGGAGGAGAAGGAACAAAAATAAGGAGAAATACTTGAAATAAACTATAGAGTTCATAACGCTGAGACAGATATTTAACTTTCGCCCAGGAACCCCTTCAAAGATACACACAACATTTGCATAGAGATATCAGTTCTTCAAGTTGGTTAGCTCTTTCTAATGAGTTTTGTAACTATCCTTTCTTTTCCGTTTCAACCCATCAGAAAGTGCTAGCTTTCAGTAGGTAAAGAGAATGAAATAAGTTTATTTGTAGCAGTCAATAAGGATCTGATCAGGTTACATCAAAGGGATGGTGGGGTGTCTAAACTCAGAATTTATTGAAAAAAAGAGGATCTTTCTAACACAAGATCACCGCAACTAGTTTAATACTATTGTGAGATCCCACCTCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGTGTTTTAAAAACCTTGAAGGGAAGTCCGAAAGGAAAAACTCAAAGAGGACAATATCCGCTAGTAGTAGACTTGGGCCATTACAAATGGGATCGGAGCTAGACATTACAAATGGGATCGAGGTGGTGTGCCAACAAGGACGCTGGGCCCTAAAGGGGGTGGATTGGGGGGTCGCACATCGATTGGAGAAGGGAACAAGTACCAACAAGGACGGTGGGCCTTAAAGGGGGATGAATTGTGAGATCCCACAACGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGGGTGAAAACCTCTCCCTAGCAGACGCGTTTTAAAAACCTTGAAGGGAAGCCTGAAAGGGAAAACTTAAAGAAGACAATATTTGCTAGCGGTAGGCTTGAGCCATTACAACTATCCAATCCCATTTGTCTTAAAAAAAACAAAAAAGAAAACAGATGAATTCACCATACCTTGTGACCATGGGAATTGCAGTGCTCCACAATATGGCGAGTGCCATATGCAATAGCCTGAACTGTGGCAAGGTACAAGACAGCTAGCTCTTGCTCACTTGTGTCAAGTGTTAAACCATGGATCACTCCTTTGGCTTTCGGATCCGAAATGGGAGACCTAATCCATGATGCAATGAAGTGTTTTGACAATCTCTAGAAGGGGAAGGAACAAAAAGAACAGGGCAAATGATTCAGTCATCCATTCACCTATTTCCATGAAAATCAGGAAGTATGTGTATATCTTCAGTCAAAGCAGCAAGAAATGGACTCTTTAGATCAACCATCAAACTCTCCAACAACTTGTTCAAAATATCAAACACAGAGACATCTGAAAGATTAAAAAGACAAAAAGAAAAAGGAAAAGAGGAGATAGAACAGTCCAGATTAGACACAATCATTGATGTATACCCTACTTTAATCACAGTACACAAATTAATATCAAAATATAATAACAAAAACGTCATACTTTGCGAAGCAGCACAGTTTGAAAGATGAGGAGAGGCGACATGATTTTGAATTAAGTGATCAAGTAGAGCACCGGTAGCACTCTGGCCACCTTCAGTGAGCCAATACTCAGGTACCATCGCTGTCGTTTTAGAAAATCATATATCATGCATGTATTTTTATGGCAATCGTGTGATTACAAGAAAAAAGAAAATACTTCTGTACAACCTCTTTCCTAAGCTAAGAAAGAAATAGATGCTTTATATAGTAAATTAAACTCAGCCGCAATGACTACAAAATAACAAATTTGTAACGGTCCAAGCCCACTACTAGTAGATATTATCCGCTTTGGCCCATTATGAATTACCGTCAGCCTCACGATTTTAGAATGCGTCTGCTAGGGAGAGGTTTCTACACCCTTATAAGAAATGTTTTGTTCCCCTCTCCAACCGATGTGAGATCTCACAATCCACCCTCCTTGGGGATCAGCGTCCTCGCTTGAACACCACCCAGTGACTGGTTCTGATACCATTTGTAATAGCCCAAGCCCACCGCTAGCAAATATTGTTCGCTTTGGCTTGTTACATATCACCGTCAGCCTCACGGTTTTAAAATGTGTCTGCTAGGGAGATGTTTCCACACCCTTATAAGGAATGCATCGTTTCACTCTCCAATTGATGTGTGATCTCACAATCCACCCCCTCGGGGGCCAAGCGTCCTCGCTGGCACACCACTCCATGACTAGCTTTAATACTATTTGTAACAGCCCAAGTCCACTGCTAATAGATATTGTCCGTTTTGGCCTGTTACATATCACTGTCAGCTTCACGGTTCTAAAACGCATATGCTAAGGAGAGGTTTCCACACCCTTGTAAGAAATGTTTCGTTCCCCTCTCCAACCGATATGGGATCGTAATTGGCACAGAACATATCCATGTACATTTTGATAGTACAAGCATTTTGATCGTGCCAGTTAGAACATAGTCCACCTACCCCTTTCTTCCTTACCAGGGTACTATTCAAAATGAAAAATTTGACAAAAAAAATTGGAATTAACTTCAATCATACCTGACCAAAACGGTCCCCAAACACCAGGAATAAAGAGTTTATCCCTTGAGACAGCCATATGGCAGGTAGATGTTCCACAAACCAGCGCCATACGATGCAATATCGTCTCCTTATTGAACTCTAGAATAGTTATTTTCAATATGAAAGAATGAAATATAATAAGGAAAAAAAGATGAACATATATTGGATGAGCCACAACCTTTAGAATTAGAACCTTGCACAGGTATACTTTCCATCACCCCAACTCCACCTGCATGAGCATCAATCAATGAAATACCAACAGGGATTCCAGCAACCAAACCCATTTCCTGATAAGCATAAAGAAAAAAGCGATTCAATCAAGTTGAAACTTTTCTCCTTTCCCCTTGAATATGCATGCATATTTGCTAATATGGAATTTACTAACCAAGTCAAAATTTTGAGTACTATATTTCTTACCTTTGCAGCTTCTGGAGTCAGACCAGAACCCAAGGGATGACCGGGGAATGCTACACTTCTTCCTAATGACATTATACATTGTGAACTTTGTACAATCAAAAAACTTCCTTTGCAATCAAAAGGTAAACTATCAGAGAGAAACTTGCATTTCTTCTGAACGGATGTACGAACGAGTCTTTAATACAAGAAATAAATCAAGATAGTTCTGCGCTCAGAACACGTCAGTGAAAAACGATGTCGAAATTTTAGGTATGTCATCAATAAGAACACTCAAAACCAAGATATATTTCCAAGTGATTCATTCAGACCTATTTTGGCATGGTGACCATCAACAAGATCTCTTAATCCAATTTCCTCCCAGAAATCATCATCCCATCCACAAGCCTCCATGTTTCGGGAATCCTTTTCGTTGTACTGTGACATGTGTGCATGGCCAAGGTAGTTCCATTTGCACACAATGGTGCAAAGACTGCGTGTATCCTCATCTGTTGCCCTAGAACATGCAGATAATGACCATATAGGTAAGAAAGATATTGAAATTTCAAGAGGTTTGGCAGTCTCTTTACCTATATGACAACCAATCACTCAAGTCCATCCACCTGAACACCATTGACCATGTGTCTGGTAAATTTTCTTTCACCCAGAGAAGCTGCAAGAATAATCTTATCATAGCATATTCCATGACACATTTATAAAAAGAGGCATATCATGCACTTCATCTCAATAGTCAAAGATCAGATTATAGAACAGGAAAGTAGAAAGTGGAAACGGAAAAAAGAAAAAAAAAAAAAGTGGAAAGTGACTGCATCTGTAATAAAAGGTGTATCTTGCACTTTCTCTCAGTTGTCAAACACAAGCATACAAAACATAAAAGTAGAAAGTGAAACTGTGAGAATTGAGCTCAAAGTGTCCGTTTATTCTGTAACAGCACAAGCTCACTGCTAGCCAATATTGTCCTCTTTGAGCTTTCCCTTCCAAGCTTCCCCTCAAGGTTTTAAAACGCGTTTGCTAAGAGAGGTTTTGTGATGTCCCATATTGGTTGGGGAGAAGAACAAAAGACTCTTTATAAGGGCGTGGAAACCTTCCCCTAGCAGACATGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAAGACAATATCTGCTAGCGGTGGATCTGGGTTGTTACAAATGGTGACAGAGCCAGACACCGGACGATGTGCCAGCCTTCTCGCTGTTCCCCAAAGGGCGGTAGACATGAGGCGGTGTGCCAGTAAGGATGTTGGGCCCAAAAGGGGGGAGGATTTGGTGGCGGTCCCATATCGATCGGAGAAAAGAAAGAGTGTTAGCGAGGTCGCTGGGCCTCGAAGGGGGGGTGGATTGTGATGTCTCACATTGGTTGGGGAGGAGAACAAAAGACCCTTTATAAGGGCGTGGAAACCTTCCCCTAGCAGACTCGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACGATATCAGCTAGCGGTGGATTTGGGTCGTTATAGGTTTTCACATCCACACCCTTATAAAGAATGCTTTGTTCTCCTCCCCAACCGATGTGGAATCTCACAATCCGCCCCCCTTCGGGGCCTAGAGTCCTTTCTGGGCCCCAAAGGGGGGTGGATTGTGATGTCTCACATTGGTTGGGGAGGAGAACAAAAAACCCTTTATAAGGGCTTGAAAACCTTCCCCTAGCAGACACGTTTTAAAGCCTTGAGGGGAAGCCTGAAAGGGAAAGCCGAAAGAGGACAATATCAGCTAGCGGTGGATCCGGGTTGTTACAGGTTTCCACACCCTTATAAAGAATGTTTTGTTCTCCTCCCCAACTGATGTGGGATCTCACAATCCACCATCCTTCGGGGCCTAGTGTCCTCGCTGGCACTCGTTTCCTTCCCTTCTCCAATCGATGTGCCAGCCTCCTCACTAATACTTCGCCCAGTGTCTGGCTCTGATGTCATTTGTAACAGCCCAAGCCCACCGCTAGTAAATATTGTCCTCTTTGGGCTTTCCCTTTTGGGCTTCCCCTCAAGGTTTTAAAACGCGTCTACTAGGGAGAGGTTTTCACACCCTTATAAAAGAAGGATTCGTTTTCCTCCCCAACCGTTGTGAGATTTCACATTTCCTCTCCTCGCTTTAGTATGTTATAAAAGCATTTATTACACTAAGAAAATCTAACCAAGACGATCATTAGAGTTTGCTGTACGAGAGAAATCACAGACATTCAATGATGAAGATAGATCATGAGAATTCCTTTCCGTTTTTGTTTTCCAACTTTTGTAACTAGACACCCTAAGTAAGATGGGGATGTGGGTGCATTGGTGCAAAACTCAGGGAGCAAAGATAGATATACTTTTACACTAAATAAATGAAAATGGATCCTTTTTTGAAGCAAATATGTATAGCACAAAAAAAGGATCAAACATCTATTTGAGTACCTTGGGGGGCTGCATCTCAGGGGAAAGAGATCCACCACAGTATTGTAATACTGGTGAATTGGAAGAGTTGATCCTTTCAGCCTGCTCTACAGCTCTATGATCCATCCACACTATTACATTTCTTCTTGAATCACCACTCCAAGATACTGTAACTGGTGAACCATCAGCGTCGACTGCAACTGAAAACAAACCATTTCAAACGAAACTAATCAAGAAGGAATTATTATCTTGTGAGTTGGTCATTCTTTAATCGAGCAAGATAAAACGACTGACGAATAACATACAGACCAAGAGAGCAGGTAGCAGCAAATCCAAGACCCTTCACTTCCTCCCCTGAGACGTTCGCCTTGGAGCATGCTAATCTTACTGCAGCACAGACTGCATGCCAGATATCTGTCGAGGATTGCTGGTTTGAAATAGAAAGCTTATAA

mRNA sequence

ATGGGCCCTTTGAATTTATATCTAGAGATTTGTAATGCTGCTGCTGCGAGAGAAGTACAATCAGCAGCAAGGGAAGACAGTAACAAGATCAGAACTGTGAAAATGTTTCCTTATTTCACTTCTCATTCTGTCCAGCCATCTCCAGAAAGCAAAGCAAGCGAGAGCTTGACAGAAGACAGAAAGAAATATGTAAGAAGAAACAAATGGAATAATAACAAGAAGGAAACGTTTGCAATACGATACCGATCGACACCAGCTAAGACAGAGCTTGTGCCATTATTGAGCGATGAGACAACTGTTGCTCGTAAAGCTCTCGGAAAATTCGGTATTTGGCGTCATGGTATACCTTCACCTTCGGCCACAGCTCCAAGAATGGCTGCACCTAAGAGCACGGACTCGCGTTCCCGAGTCAAAGCAGCAAGAAATGGACTCTTTAGATCAACCATCAAACTCTCCAACAACTTGTTCAAAATATCAAACACAGAGACATCTGAAAGATTAAAAAGACAAAAAGAAAAAGGAAAAGAGGAGATAGAACAGTCCAGATTAGACACAATCATTGATCTTCTGGAGTCAGACCAGAACCCAAGGGATGACCGGGGAATGCTACACTTCTTCCTAATGACATTATACATTGTGAACTTTGTACAATCAAAAAACTTCCTTTGCAATCAAAAGAAATCATCATCCCATCCACAAGCCTCCATGTTTCGGGAATCCTTTTCGTTGTACTGTGACATGTGTGCATGGCCAAGACCAAGAGAGCAGGTAGCAGCAAATCCAAGACCCTTCACTTCCTCCCCTGAGACGTTCGCCTTGGAGCATGCTAATCTTACTGCAGCACAGACTGCATGCCAGATATCTGTCGAGGATTGCTGGTTTGAAATAGAAAGCTTATAA

Coding sequence (CDS)

ATGGGCCCTTTGAATTTATATCTAGAGATTTGTAATGCTGCTGCTGCGAGAGAAGTACAATCAGCAGCAAGGGAAGACAGTAACAAGATCAGAACTGTGAAAATGTTTCCTTATTTCACTTCTCATTCTGTCCAGCCATCTCCAGAAAGCAAAGCAAGCGAGAGCTTGACAGAAGACAGAAAGAAATATGTAAGAAGAAACAAATGGAATAATAACAAGAAGGAAACGTTTGCAATACGATACCGATCGACACCAGCTAAGACAGAGCTTGTGCCATTATTGAGCGATGAGACAACTGTTGCTCGTAAAGCTCTCGGAAAATTCGGTATTTGGCGTCATGGTATACCTTCACCTTCGGCCACAGCTCCAAGAATGGCTGCACCTAAGAGCACGGACTCGCGTTCCCGAGTCAAAGCAGCAAGAAATGGACTCTTTAGATCAACCATCAAACTCTCCAACAACTTGTTCAAAATATCAAACACAGAGACATCTGAAAGATTAAAAAGACAAAAAGAAAAAGGAAAAGAGGAGATAGAACAGTCCAGATTAGACACAATCATTGATCTTCTGGAGTCAGACCAGAACCCAAGGGATGACCGGGGAATGCTACACTTCTTCCTAATGACATTATACATTGTGAACTTTGTACAATCAAAAAACTTCCTTTGCAATCAAAAGAAATCATCATCCCATCCACAAGCCTCCATGTTTCGGGAATCCTTTTCGTTGTACTGTGACATGTGTGCATGGCCAAGACCAAGAGAGCAGGTAGCAGCAAATCCAAGACCCTTCACTTCCTCCCCTGAGACGTTCGCCTTGGAGCATGCTAATCTTACTGCAGCACAGACTGCATGCCAGATATCTGTCGAGGATTGCTGGTTTGAAATAGAAAGCTTATAA

Protein sequence

MGPLNLYLEICNAAAAREVQSAAREDSNKIRTVKMFPYFTSHSVQPSPESKASESLTEDRKKYVRRNKWNNNKKETFAIRYRSTPAKTELVPLLSDETTVARKALGKFGIWRHGIPSPSATAPRMAAPKSTDSRSRVKAARNGLFRSTIKLSNNLFKISNTETSERLKRQKEKGKEEIEQSRLDTIIDLLESDQNPRDDRGMLHFFLMTLYIVNFVQSKNFLCNQKKSSSHPQASMFRESFSLYCDMCAWPRPREQVAANPRPFTSSPETFALEHANLTAAQTACQISVEDCWFEIESL
Homology
[Close]
BLAST of Carg08360 vs. NCBI nr
Match: KAG7029795.1 (hypothetical protein SDJN02_08138, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 589.7 bits (1519), Expect = 1.4e-164
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0 

Query: 1   MGPLNLYLEICNAAAAREVQSAAREDSNKIRTVKMFPYFTSHSVQPSPESKASESLTEDR 60
           MGPLNLYLEICNAAAAREVQSAAREDSNKIRTVKMFPYFTSHSVQPSPESKASESLTEDR
Sbjct: 1   MGPLNLYLEICNAAAAREVQSAAREDSNKIRTVKMFPYFTSHSVQPSPESKASESLTEDR 60

Query: 61  KKYVRRNKWNNNKKETFAIRYRSTPAKTELVPLLSDETTVARKALGKFGIWRHGIPSPSA 120
           KKYVRRNKWNNNKKETFAIRYRSTPAKTELVPLLSDETTVARKALGKFGIWRHGIPSPSA
Sbjct: 61  KKYVRRNKWNNNKKETFAIRYRSTPAKTELVPLLSDETTVARKALGKFGIWRHGIPSPSA 120

Query: 121 TAPRMAAPKSTDSRSRVKAARNGLFRSTIKLSNNLFKISNTETSERLKRQKEKGKEEIEQ 180
           TAPRMAAPKSTDSRSRVKAARNGLFRSTIKLSNNLFKISNTETSERLKRQKEKGKEEIEQ
Sbjct: 121 TAPRMAAPKSTDSRSRVKAARNGLFRSTIKLSNNLFKISNTETSERLKRQKEKGKEEIEQ 180

Query: 181 SRLDTIIDLLESDQNPRDDRGMLHFFLMTLYIVNFVQSKNFLCNQKKSSSHPQASMFRES 240
           SRLDTIIDLLESDQNPRDDRGMLHFFLMTLYIVNFVQSKNFLCNQKKSSSHPQASMFRES
Sbjct: 181 SRLDTIIDLLESDQNPRDDRGMLHFFLMTLYIVNFVQSKNFLCNQKKSSSHPQASMFRES 240

Query: 241 FSLYCDMCAWPRPREQVAANPRPFTSSPETFALEHANLTAAQTACQISVEDCWFEIESL 300
           FSLYCDMCAWPRPREQVAANPRPFTSSPETFALEHANLTAAQTACQISVEDCWFEIESL
Sbjct: 241 FSLYCDMCAWPRPREQVAANPRPFTSSPETFALEHANLTAAQTACQISVEDCWFEIESL 299

The following BLAST results are available for this feature:
BLAST of Carg08360 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7029795.11.4e-164100.00hypothetical protein SDJN02_08138, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Carg08360 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg08360 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg08360 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 164..184

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg08360-RACarg08360-RAmRNA