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Carg08274 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAACAGTTGCTGCCGCCGTCGAAATGGGAAGGAGAAGTCTCCGCCGAGACAACCGCCGGGAAGCCTCACGAAATCTGGCCGTTGCTGGCCGATGAGTTCTGCAGTCTCCACAAATGGCTTCCGATAGACACGTGTCACTACGTGGAAGGTGTACAGGGGCAGCCGGGTCTGATCCGGTACTGCGCCACCACCGACACGACGTCGTCATCAGAACCATCGATTAAGTGGGCCCACGAGAGGCTGAAATTGATTGATCCGACCGAACATATTCTCTCCTACGAGATCCTGGACAACAACGTCGGATTCAAGTCGTACGTGGCCACCATGAAGCTGCTGCCTGGCGGCGGGGACGACGGCGGCGGGTGCAAGATGGTGTGGTCGTTTGAGGCGGATCCGATTGAAGGGTGGCCGTTGGAGGAGTTCGTGAAGTATCTTGAATTTTCTCTGCAGCAAATGGTGAACAAAATGGCAGAGTATTTGCAGAAAAGTCCCTGA ATGGAAGAACAGTTGCTGCCGCCGTCGAAATGGGAAGGAGAAGTCTCCGCCGAGACAACCGCCGGGAAGCCTCACGAAATCTGGCCGTTGCTGGCCGATGAGTTCTGCAGTCTCCACAAATGGCTTCCGATAGACACGTGTCACTACGTGGAAGGTGTACAGGGGCAGCCGGGTCTGATCCGGTACTGCGCCACCACCGACACGACGTCGTCATCAGAACCATCGATTAAGTGGGCCCACGAGAGGCTGAAATTGATTGATCCGACCGAACATATTCTCTCCTACGAGATCCTGGACAACAACGTCGGATTCAAGTCGTACGTGGCCACCATGAAGCTGCTGCCTGGCGGCGGGGACGACGGCGGCGGGTGCAAGATGGTGTGGTCGTTTGAGGCGGATCCGATTGAAGGGTGGCCGTTGGAGGAGTTCGTGAAGTATCTTGAATTTTCTCTGCAGCAAATGGTGAACAAAATGGCAGAGTATTTGCAGAAAAGTCCCTGA ATGGAAGAACAGTTGCTGCCGCCGTCGAAATGGGAAGGAGAAGTCTCCGCCGAGACAACCGCCGGGAAGCCTCACGAAATCTGGCCGTTGCTGGCCGATGAGTTCTGCAGTCTCCACAAATGGCTTCCGATAGACACGTGTCACTACGTGGAAGGTGTACAGGGGCAGCCGGGTCTGATCCGGTACTGCGCCACCACCGACACGACGTCGTCATCAGAACCATCGATTAAGTGGGCCCACGAGAGGCTGAAATTGATTGATCCGACCGAACATATTCTCTCCTACGAGATCCTGGACAACAACGTCGGATTCAAGTCGTACGTGGCCACCATGAAGCTGCTGCCTGGCGGCGGGGACGACGGCGGCGGGTGCAAGATGGTGTGGTCGTTTGAGGCGGATCCGATTGAAGGGTGGCCGTTGGAGGAGTTCGTGAAGTATCTTGAATTTTCTCTGCAGCAAATGGTGAACAAAATGGCAGAGTATTTGCAGAAAAGTCCCTGA MEEQLLPPSKWEGEVSAETTAGKPHEIWPLLADEFCSLHKWLPIDTCHYVEGVQGQPGLIRYCATTDTTSSSEPSIKWAHERLKLIDPTEHILSYEILDNNVGFKSYVATMKLLPGGGDDGGGCKMVWSFEADPIEGWPLEEFVKYLEFSLQQMVNKMAEYLQKSP Homology
BLAST of Carg08274 vs. NCBI nr
Match: XP_022961689.1 (lachrymatory-factor synthase-like [Cucurbita moschata]) HSP 1 Score: 358.2 bits (918), Expect = 3.8e-95 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of Carg08274 vs. NCBI nr
Match: KAG6598772.1 (Lachrymatory-factor synthase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029711.1 Lachrymatory-factor synthase, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 358.2 bits (918), Expect = 3.8e-95 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of Carg08274 vs. NCBI nr
Match: XP_023547300.1 (lachrymatory-factor synthase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 351.7 bits (901), Expect = 3.5e-93 Identity = 161/166 (96.99%), Postives = 165/166 (99.40%), Query Frame = 0
BLAST of Carg08274 vs. NCBI nr
Match: XP_023521854.1 (lachrymatory-factor synthase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 349.7 bits (896), Expect = 1.3e-92 Identity = 161/166 (96.99%), Postives = 165/166 (99.40%), Query Frame = 0
BLAST of Carg08274 vs. NCBI nr
Match: XP_022996730.1 (lachrymatory-factor synthase-like [Cucurbita maxima]) HSP 1 Score: 349.0 bits (894), Expect = 2.3e-92 Identity = 159/166 (95.78%), Postives = 165/166 (99.40%), Query Frame = 0
BLAST of Carg08274 vs. ExPASy TrEMBL
Match: A0A6J1HER8 (lachrymatory-factor synthase-like OS=Cucurbita moschata OX=3662 GN=LOC111462382 PE=3 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 1.8e-95 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of Carg08274 vs. ExPASy TrEMBL
Match: A0A6J1K7L1 (lachrymatory-factor synthase-like OS=Cucurbita maxima OX=3661 GN=LOC111491885 PE=3 SV=1) HSP 1 Score: 349.0 bits (894), Expect = 1.1e-92 Identity = 159/166 (95.78%), Postives = 165/166 (99.40%), Query Frame = 0
BLAST of Carg08274 vs. ExPASy TrEMBL
Match: A0A5A7VDC6 (Lachrymatory-factor synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003750 PE=3 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 1.4e-66 Identity = 125/166 (75.30%), Postives = 138/166 (83.13%), Query Frame = 0
BLAST of Carg08274 vs. ExPASy TrEMBL
Match: A0A0A0LLI5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G373480 PE=3 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 1.4e-66 Identity = 124/161 (77.02%), Postives = 136/161 (84.47%), Query Frame = 0
BLAST of Carg08274 vs. ExPASy TrEMBL
Match: A0A1S3BCJ7 (lachrymatory-factor synthase OS=Cucumis melo OX=3656 GN=LOC103488174 PE=3 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 1.4e-66 Identity = 125/166 (75.30%), Postives = 138/166 (83.13%), Query Frame = 0
BLAST of Carg08274 vs. TAIR 10
Match: AT4G32870.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 151.4 bits (381), Expect = 6.5e-37 Identity = 71/150 (47.33%), Postives = 99/150 (66.00%), Query Frame = 0
BLAST of Carg08274 vs. TAIR 10
Match: AT2G25770.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 141.7 bits (356), Expect = 5.2e-34 Identity = 69/160 (43.12%), Postives = 98/160 (61.25%), Query Frame = 0
BLAST of Carg08274 vs. TAIR 10
Match: AT2G25770.2 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 141.7 bits (356), Expect = 5.2e-34 Identity = 69/160 (43.12%), Postives = 98/160 (61.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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