Homology
BLAST of Carg08264 vs. NCBI nr
Match:
KAG7029701.1 (RNA polymerase sigma factor sigC [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1074.7 bits (2778), Expect = 4.3e-310
Identity = 558/558 (100.00%), Postives = 558/558 (100.00%), Query Frame = 0
Query: 1 MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE 60
MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE
Sbjct: 1 MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE 60
Query: 61 ALKTYTCLSEAPQTLADGLLDLEEKEIEINSGAKSLGHLRYGSKNSGPSKVEDNFCSCTS 120
ALKTYTCLSEAPQTLADGLLDLEEKEIEINSGAKSLGHLRYGSKNSGPSKVEDNFCSCTS
Sbjct: 61 ALKTYTCLSEAPQTLADGLLDLEEKEIEINSGAKSLGHLRYGSKNSGPSKVEDNFCSCTS 120
Query: 121 LPTGRASPFGMLMENLDVLEETFTESGMLSLERDILLQLTKLGALEFFNACLSRTLKASS 180
LPTGRASPFGMLMENLDVLEETFTESGMLSLERDILLQLTKLGALEFFNACLSRTLKASS
Sbjct: 121 LPTGRASPFGMLMENLDVLEETFTESGMLSLERDILLQLTKLGALEFFNACLSRTLKASS 180
Query: 181 SFHDLSDLPIEVGGDHNVNQKTDDQNDNIVVYSGKRAGRRSVKRRAMDNADKVASRPLAT 240
SFHDLSDLPIEVGGDHNVNQKTDDQNDNIVVYSGKRAGRRSVKRRAMDNADKVASRPLAT
Sbjct: 181 SFHDLSDLPIEVGGDHNVNQKTDDQNDNIVVYSGKRAGRRSVKRRAMDNADKVASRPLAT 240
Query: 241 RAAKEKFRSLRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETLEKESGRTASMSC 300
RAAKEKFRSLRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETLEKESGRTASMSC
Sbjct: 241 RAAKEKFRSLRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETLEKESGRTASMSC 300
Query: 301 WADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL 360
WADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL
Sbjct: 301 WADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL 360
Query: 361 QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS 420
QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS
Sbjct: 361 QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS 420
Query: 421 GRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT 480
GRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT
Sbjct: 421 GRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT 480
Query: 481 VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLCVSKEWVRKIERKA 540
VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLCVSKEWVRKIERKA
Sbjct: 481 VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLCVSKEWVRKIERKA 540
Query: 541 TTKLKNEETVRNLSHYLD 559
TTKLKNEETVRNLSHYLD
Sbjct: 541 TTKLKNEETVRNLSHYLD 558
BLAST of Carg08264 vs. NCBI nr
Match:
XP_022962483.1 (RNA polymerase sigma factor sigC-like [Cucurbita moschata])
HSP 1 Score: 1065.4 bits (2754), Expect = 1.6e-307
Identity = 553/558 (99.10%), Postives = 555/558 (99.46%), Query Frame = 0
Query: 1 MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE 60
MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE
Sbjct: 1 MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE 60
Query: 61 ALKTYTCLSEAPQTLADGLLDLEEKEIEINSGAKSLGHLRYGSKNSGPSKVEDNFCSCTS 120
ALKTYTCLSEAPQTLADGLLDLEEKEIEINSGAKSLGHLRYGSKNSGPSKVEDNFCSCTS
Sbjct: 61 ALKTYTCLSEAPQTLADGLLDLEEKEIEINSGAKSLGHLRYGSKNSGPSKVEDNFCSCTS 120
Query: 121 LPTGRASPFGMLMENLDVLEETFTESGMLSLERDILLQLTKLGALEFFNACLSRTLKASS 180
LPTGRASPFGMLMENLDVLEETFTESGMLSLERDI+LQLTKLGALEFFNACLSRTLKASS
Sbjct: 121 LPTGRASPFGMLMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNACLSRTLKASS 180
Query: 181 SFHDLSDLPIEVGGDHNVNQKTDDQNDNIVVYSGKRAGRRSVKRRAMDNADKVASRPLAT 240
SF DLSDLPIEVGGDHNVNQKTDDQNDNI+VYSGKRAGRRSVKRRAMDNADKVASRPLAT
Sbjct: 181 SFRDLSDLPIEVGGDHNVNQKTDDQNDNIIVYSGKRAGRRSVKRRAMDNADKVASRPLAT 240
Query: 241 RAAKEKFRSLRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETLEKESGRTASMSC 300
RAAKEKFRS RKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRET EKESGRTASMSC
Sbjct: 241 RAAKEKFRSSRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETSEKESGRTASMSC 300
Query: 301 WADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL 360
WADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL
Sbjct: 301 WADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL 360
Query: 361 QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS 420
QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS
Sbjct: 361 QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS 420
Query: 421 GRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT 480
GRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT
Sbjct: 421 GRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT 480
Query: 481 VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLCVSKEWVRKIERKA 540
VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLCVSKEWVRKIERKA
Sbjct: 481 VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLCVSKEWVRKIERKA 540
Query: 541 TTKLKNEETVRNLSHYLD 559
TTKLKNEETVRNLSHYLD
Sbjct: 541 TTKLKNEETVRNLSHYLD 558
BLAST of Carg08264 vs. NCBI nr
Match:
XP_023546255.1 (RNA polymerase sigma factor sigC-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1058.9 bits (2737), Expect = 1.5e-305
Identity = 551/558 (98.75%), Postives = 553/558 (99.10%), Query Frame = 0
Query: 1 MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE 60
MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE
Sbjct: 1 MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE 60
Query: 61 ALKTYTCLSEAPQTLADGLLDLEEKEIEINSGAKSLGHLRYGSKNSGPSKVEDNFCSCTS 120
ALKTYTCLSEAPQTLADGLLDLEEKEIEINSGAKSLGHLRYGSKNSGPSKVEDNFCSCTS
Sbjct: 61 ALKTYTCLSEAPQTLADGLLDLEEKEIEINSGAKSLGHLRYGSKNSGPSKVEDNFCSCTS 120
Query: 121 LPTGRASPFGMLMENLDVLEETFTESGMLSLERDILLQLTKLGALEFFNACLSRTLKASS 180
LPTGRASPFGMLMENLDVLEETFTESGMLSLERDI+LQLTKLGALEFFNACLSRTLKASS
Sbjct: 121 LPTGRASPFGMLMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNACLSRTLKASS 180
Query: 181 SFHDLSDLPIEVGGDHNVNQKTDDQNDNIVVYSGKRAGRRSVKRRAMDNADKVASRPLAT 240
SF DLSDLPIEVGGDHNVNQKTDDQNDNI+VYSGKRAGRRSVKRRAMDNADKVASRPLAT
Sbjct: 181 SFRDLSDLPIEVGGDHNVNQKTDDQNDNIIVYSGKRAGRRSVKRRAMDNADKVASRPLAT 240
Query: 241 RAAKEKFRSLRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETLEKESGRTASMSC 300
RAAKEKFRS RKKASNSKKRRS VARNEAEMSTGVKVVANLERIRETLEKESGRTASMSC
Sbjct: 241 RAAKEKFRSSRKKASNSKKRRSTVARNEAEMSTGVKVVANLERIRETLEKESGRTASMSC 300
Query: 301 WADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL 360
WADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL
Sbjct: 301 WADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL 360
Query: 361 QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS 420
QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS
Sbjct: 361 QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS 420
Query: 421 GRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT 480
GRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT
Sbjct: 421 GRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT 480
Query: 481 VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLCVSKEWVRKIERKA 540
VKR LMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLL VSKEWVRKIERKA
Sbjct: 481 VKRMLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLRVSKEWVRKIERKA 540
Query: 541 TTKLKNEETVRNLSHYLD 559
TTKLKNEETVRNLSHYLD
Sbjct: 541 TTKLKNEETVRNLSHYLD 558
BLAST of Carg08264 vs. NCBI nr
Match:
XP_022996943.1 (RNA polymerase sigma factor sigC-like isoform X1 [Cucurbita maxima])
HSP 1 Score: 1051.6 bits (2718), Expect = 2.4e-303
Identity = 546/558 (97.85%), Postives = 551/558 (98.75%), Query Frame = 0
Query: 1 MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE 60
MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE
Sbjct: 1 MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE 60
Query: 61 ALKTYTCLSEAPQTLADGLLDLEEKEIEINSGAKSLGHLRYGSKNSGPSKVEDNFCSCTS 120
ALKTYTCLSEAPQTLADGLLDLEEKE+EINSGAKSL HL YGSKNSGPSKVEDNFCSCTS
Sbjct: 61 ALKTYTCLSEAPQTLADGLLDLEEKEVEINSGAKSLSHLHYGSKNSGPSKVEDNFCSCTS 120
Query: 121 LPTGRASPFGMLMENLDVLEETFTESGMLSLERDILLQLTKLGALEFFNACLSRTLKASS 180
LPTGRASPF MLMENLDVLEETFTESGMLSLERDI+LQLTKLGALEFFNACLSRTLKASS
Sbjct: 121 LPTGRASPFDMLMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNACLSRTLKASS 180
Query: 181 SFHDLSDLPIEVGGDHNVNQKTDDQNDNIVVYSGKRAGRRSVKRRAMDNADKVASRPLAT 240
SF DLSDLPIEVGGDHNVNQKTDDQN NI+VYSGKRAGRRSVKRRAMDNADKVASRPLAT
Sbjct: 181 SFRDLSDLPIEVGGDHNVNQKTDDQNHNIIVYSGKRAGRRSVKRRAMDNADKVASRPLAT 240
Query: 241 RAAKEKFRSLRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETLEKESGRTASMSC 300
RAAKEKFRS RKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETLEKESGRTASMSC
Sbjct: 241 RAAKEKFRSSRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETLEKESGRTASMSC 300
Query: 301 WADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL 360
WADA+SIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL
Sbjct: 301 WADASSIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL 360
Query: 361 QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS 420
QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS
Sbjct: 361 QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS 420
Query: 421 GRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT 480
GRRYSDDD+AKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT
Sbjct: 421 GRRYSDDDVAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT 480
Query: 481 VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLCVSKEWVRKIERKA 540
VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLL VSKEWVRKIERKA
Sbjct: 481 VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLRVSKEWVRKIERKA 540
Query: 541 TTKLKNEETVRNLSHYLD 559
TTKLKNEETVRNLSHYLD
Sbjct: 541 TTKLKNEETVRNLSHYLD 558
BLAST of Carg08264 vs. NCBI nr
Match:
XP_022996944.1 (RNA polymerase sigma factor sigC-like isoform X2 [Cucurbita maxima])
HSP 1 Score: 1043.1 bits (2696), Expect = 8.6e-301
Identity = 545/558 (97.67%), Postives = 549/558 (98.39%), Query Frame = 0
Query: 1 MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE 60
MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE
Sbjct: 1 MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE 60
Query: 61 ALKTYTCLSEAPQTLADGLLDLEEKEIEINSGAKSLGHLRYGSKNSGPSKVEDNFCSCTS 120
ALKTYTCLSEAPQTLADGLLDLEEK EINSGAKSL HL YGSKNSGPSKVEDNFCSCTS
Sbjct: 61 ALKTYTCLSEAPQTLADGLLDLEEK--EINSGAKSLSHLHYGSKNSGPSKVEDNFCSCTS 120
Query: 121 LPTGRASPFGMLMENLDVLEETFTESGMLSLERDILLQLTKLGALEFFNACLSRTLKASS 180
LPTGRASPF MLMENLDVLEETFTESGMLSLERDI+LQLTKLGALEFFNACLSRTLKASS
Sbjct: 121 LPTGRASPFDMLMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNACLSRTLKASS 180
Query: 181 SFHDLSDLPIEVGGDHNVNQKTDDQNDNIVVYSGKRAGRRSVKRRAMDNADKVASRPLAT 240
SF DLSDLPIEVGGDHNVNQKTDDQN NI+VYSGKRAGRRSVKRRAMDNADKVASRPLAT
Sbjct: 181 SFRDLSDLPIEVGGDHNVNQKTDDQNHNIIVYSGKRAGRRSVKRRAMDNADKVASRPLAT 240
Query: 241 RAAKEKFRSLRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETLEKESGRTASMSC 300
RAAKEKFRS RKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETLEKESGRTASMSC
Sbjct: 241 RAAKEKFRSSRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETLEKESGRTASMSC 300
Query: 301 WADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL 360
WADA+SIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL
Sbjct: 301 WADASSIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL 360
Query: 361 QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS 420
QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS
Sbjct: 361 QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS 420
Query: 421 GRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT 480
GRRYSDDD+AKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT
Sbjct: 421 GRRYSDDDVAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT 480
Query: 481 VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLCVSKEWVRKIERKA 540
VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLL VSKEWVRKIERKA
Sbjct: 481 VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLRVSKEWVRKIERKA 540
Query: 541 TTKLKNEETVRNLSHYLD 559
TTKLKNEETVRNLSHYLD
Sbjct: 541 TTKLKNEETVRNLSHYLD 556
BLAST of Carg08264 vs. ExPASy Swiss-Prot
Match:
O24621 (RNA polymerase sigma factor sigC OS=Arabidopsis thaliana OX=3702 GN=SIGC PE=2 SV=1)
HSP 1 Score: 398.7 bits (1023), Expect = 1.1e-109
Identity = 235/521 (45.11%), Postives = 329/521 (63.15%), Query Frame = 0
Query: 43 RLSFFSSTCEEGEAISREALKTYTCLSEAPQTLADGLLDLEEKEIEINSGAKSLGHLRYG 102
R SF SS EE ++LK C S +P T + + L+
Sbjct: 84 RWSFLSSVKEESRIYQNDSLKACGCASVSPYTAQNNV----------------YVELKDP 143
Query: 103 SKNSGPSKVEDNFCSCTSLPTGRASPFGMLMENLDVLEETFTESGMLSLERDILLQLTKL 162
+N G E ++ S + L + +L +NL LEETF + +ERDI+LQ+ KL
Sbjct: 144 KENIGVGSAERSYSSRSML------QYNLLAKNLLALEETFVALDSVRMERDIMLQMGKL 203
Query: 163 GALEFFNACLSRTLKASSSFHDLSDLPIEVGGDHNVNQKTDDQNDNIVVYSGKRAGRRSV 222
GA E F CLSR + SS LSD + D + V S +R ++
Sbjct: 204 GAAELFKTCLSR-YRGSSITSCLSD----------TTELVDTTPNQQVFVSSRRKVKKKA 263
Query: 223 KRRAM--DNADKVASRPLATRAAKEKFRSLR-KKASNSKKRRSIVARNEAEMSTGVKVVA 282
+R ++ +N D+ +S P+ R R ++ +K+R ++RNE EMSTGVK+VA
Sbjct: 264 RRSSVTAENGDQ-SSLPIGLRTTWNNIDVPRVRRPPKYRKKRERISRNETEMSTGVKIVA 323
Query: 283 NLERIRETLEKESGRTASMSCWADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAK 342
++ERIR LE+ESG+ AS+SCWA AA ++ K L + L +GW+C+DEL++ST SLV+FLA+
Sbjct: 324 DMERIRTQLEEESGKVASLSCWAAAAGMNEKLLMRNLHYGWYCRDELVKSTRSLVLFLAR 383
Query: 343 KYRCSGLPMEDLVQAGAIGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQI 402
YR G+ EDL+QAG +GVLQG ERFD RG++FSTY+QYWIRKSMS +V+R +RG+ I
Sbjct: 384 NYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHI 443
Query: 403 PWSLTKAINQIQKARKALNNS-GRRY-SDDDIAKATGLPLAKVRVASNCLKVVGSVDQKI 462
P S+ + IN IQKARK L S G +Y +D++IAK TG + K+R A+ CLKVVGS+D+K+
Sbjct: 444 PSSIIRTINHIQKARKTLKTSHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKV 503
Query: 463 GDGLNMKYMELTADTSIESPEDTVKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPK 522
GD K++E T DT++ESPE+ V R+ ++DI +LLE LE RE+QV+VLRYGL D +PK
Sbjct: 504 GDCFTTKFLEFTPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPK 563
Query: 523 SLEEIGKLLCVSKEWVRKIERKATTKLKNEETVRNLSHYLD 559
SLEEIGKLL VSKEW+RKIER+A KL+++ +L +YL+
Sbjct: 564 SLEEIGKLLKVSKEWIRKIERRAMAKLRDQPNAEDLRYYLN 570
BLAST of Carg08264 vs. ExPASy Swiss-Prot
Match:
O22056 (RNA polymerase sigma factor sigB OS=Arabidopsis thaliana OX=3702 GN=SIGB PE=2 SV=2)
HSP 1 Score: 210.3 bits (534), Expect = 5.6e-53
Identity = 131/403 (32.51%), Postives = 238/403 (59.06%), Query Frame = 0
Query: 169 NACLSRTLKASSSFHD-LSDLPIEVGGDHNVNQKTDDQNDNIVVYSGKRAGRRSVKRRAM 228
N +S + AS+S + + DL E V + + ++ V S ++ R++ + + +
Sbjct: 171 NGIVSDKITASASNKESIGDLESE--KQEEVELLEEQPSVSLAVRSTRQTERKARRAKGL 230
Query: 229 DN------ADKVASRPLATRAAKEK------FRSLRKKASNSKKRRSIVARNEAEMSTGV 288
+ + K S P R ++ R LR S+SK + R E E+S G+
Sbjct: 231 EKTASGIPSVKTGSSPKKKRLVAQEVDHNDPLRYLRMTTSSSK---LLTVREEHELSAGI 290
Query: 289 KVVANLERIRETLEKESGRTASMSCWADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVI 348
+ + LER++ L + SGR + + WA AA +D K L++++ G C+D++++S LVI
Sbjct: 291 QDLLKLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQRIHHGTLCKDKMIKSNIRLVI 350
Query: 349 FLAKKYRCSGLPMEDLVQAGAIGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSR 408
+AK Y+ +G+ ++DLVQ G G+++G E+FD +GF+FSTY +WI++++ + ++ SR
Sbjct: 351 SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSR 410
Query: 409 GIQIPWSLTKAINQIQKARKAL-NNSGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVD 468
I++P+ + +A ++++ARK L + +G+ +++IA+ATGL + ++ K S+D
Sbjct: 411 MIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLSMKRLMAVLLSPKPPRSLD 470
Query: 469 QKIGDGLNMKYMELTADTSIESPEDTVKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDS 528
QKIG N+K E+ AD + ED + + M++D+ +L+ L +RE+QV+ R+G+ D
Sbjct: 471 QKIGMNQNLKPSEVIADPEAVTSEDILIKEFMRQDLDKVLDSLGTREKQVIRWRFGMEDG 530
Query: 529 QPKSLEEIGKLLCVSKEWVRKIERKATTKLKNEETVRNLSHYL 558
+ K+L+EIG+++ VS+E VR+IE A KLKN++ +L YL
Sbjct: 531 RMKTLQEIGEMMGVSRERVRQIESSAFRKLKNKKRNNHLQQYL 568
BLAST of Carg08264 vs. ExPASy Swiss-Prot
Match:
P38023 (RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=sigA1 PE=3 SV=2)
HSP 1 Score: 178.3 bits (451), Expect = 2.4e-43
Identity = 113/339 (33.33%), Postives = 197/339 (58.11%), Query Frame = 0
Query: 226 AMDNADKVASRPLATRAAKEKFR------SLRKKASNSKKRRSIVARNEAEMSTGVKVVA 285
A+D+ D V A AK K R S+R + R + A E E++ + +
Sbjct: 61 AIDDEDSVGEDEDAAAKAKAKVRKTYTEDSIRLYLQEIGRIRLLRADEEIELARQIADLL 120
Query: 286 NLERIRETLEKESGRTASMSCWADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAK 345
LERIR+ L ++ R S + WA A + + +++L G +D++++S LV+ +AK
Sbjct: 121 ALERIRDELLEQLDRLPSDAEWAAAVDSPLDEFRRRLFRGRRAKDKMVQSNLRLVVSIAK 180
Query: 346 KYRCSGLPMEDLVQAGAIGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQI 405
KY GL +DL+Q G++G+++ E+FD ++G++FSTY +WIR++++R +A SR I++
Sbjct: 181 KYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRL 240
Query: 406 PWSLTKAINQIQKARKALNNS-GRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKIG 465
P L + I++I+K K L+ GR+ ++++IA + + K+R + ++ S++ IG
Sbjct: 241 PVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIG 300
Query: 466 DGLNMKYMELTADTSIESPEDTVKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKS 525
+ + + + E+PED V + L+++D+ +L L RER VL LRYGL D + K+
Sbjct: 301 KEEDSRLGDF-IEADGETPEDEVAKNLLREDLEGVLSTLSPRERDVLRLRYGLDDGRMKT 360
Query: 526 LEEIGKLLCVSKEWVRKIERKATTKLKNEETVRNLSHYL 558
LEEIG+L V++E +R+IE KA KL++ L Y+
Sbjct: 361 LEEIGQLFNVTRERIRQIEAKALRKLRHPNRNSILKEYI 398
BLAST of Carg08264 vs. ExPASy Swiss-Prot
Match:
P26683 (RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=sigA PE=3 SV=1)
HSP 1 Score: 176.0 bits (445), Expect = 1.2e-42
Identity = 120/383 (31.33%), Postives = 215/383 (56.14%), Query Frame = 0
Query: 184 DLSDLPIE------VGGDHNVNQKTDDQNDNIVVYSGKRAGRRSVKRRAMDNADKVASRP 243
+L DL IE + D ++++ + Q D SGK A R RR
Sbjct: 25 ELDDLLIEEDEDLLLADDGDIDEFLEPQTDEDDAKSGKAAKSR---RR------------ 84
Query: 244 LATRAAKEKFR--SLRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETLEKESGRT 303
T++ K+ + S+R + R + A E E++ + + LER+RE L ++ R
Sbjct: 85 --TQSKKKHYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVRERLSEKLERD 144
Query: 304 ASMSCWADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAG 363
S WA+A + + + +L G +D++++S LV+ +AKKY GL +DL+Q G
Sbjct: 145 PRDSEWAEAVQLPLPAFRYRLHIGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEG 204
Query: 364 AIGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARK 423
++G+++ E+FD ++G++FSTY +WIR++++R +A SR I++P L + I++I+K K
Sbjct: 205 SLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTK 264
Query: 424 ALNNS-GRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSI 483
L+ GR+ ++++IA + + K+R + ++ S++ IG + + + ++
Sbjct: 265 LLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDF-IESDG 324
Query: 484 ESPEDTVKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLCVSKEWVR 543
E+PED V + L+++D+ +L+ L RER VL LRYGL D + K+LEEIG++ V++E +R
Sbjct: 325 ETPEDQVSKNLLREDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIR 384
Query: 544 KIERKATTKLKNEETVRNLSHYL 558
+IE KA KL++ L Y+
Sbjct: 385 QIEAKALRKLRHPNRNSVLKEYI 389
BLAST of Carg08264 vs. ExPASy Swiss-Prot
Match:
Q9LD95 (RNA polymerase sigma factor sigF, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SIGF PE=1 SV=1)
HSP 1 Score: 168.3 bits (425), Expect = 2.4e-40
Identity = 107/359 (29.81%), Postives = 205/359 (57.10%), Query Frame = 0
Query: 210 VVYSGKRAGRRSVKRRA--MDNADKVASRPLATRAAKEKFR-------SLRKKASNSKKR 269
+V S ++ RR+ RRA ++ D P T +AK+K++ +L+ + +
Sbjct: 187 IVRSKRQLERRAKNRRAPKSNDVDDEGYVPQKT-SAKKKYKQGADNDDALQLFLWGPETK 246
Query: 270 RSIVARNEAEMSTGVKVVANLERIRETLEKESGRTASMSCWADAASIDIKDLQKQLQFGW 329
+ + A+ EAE+ + ++ + LE+++ LE ++G ++ WA+A I L+ + G
Sbjct: 247 QLLTAKEEAELISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVLKSDIHRGR 306
Query: 330 FCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVLQGVERFDPKRGFRFSTYIQY 389
+++L+ + LV+ +AK+Y+ GL +DL+Q G++G+++ VE+F P+ G RF+TY +
Sbjct: 307 SSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYW 366
Query: 390 WIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNSGR-RYSDDDIAKATGLPLAK 449
WIR+S+ + + ++SR I++P ++ + ++ +ARK G R S +++A G+ K
Sbjct: 367 WIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEELAGHVGVSTEK 426
Query: 450 VRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDTVKRRLMKKDIFNLLEVLES 509
+ + S+ Q I + + E+T D+ IE+P +V ++LM+ + NLL VL
Sbjct: 427 LDKLLYNTRTPLSMQQPIWSDQDTTFQEITPDSGIETPTMSVGKQLMRNHVRNLLNVLSP 486
Query: 510 RERQVLVLRYGLMDSQPKSLEEIGKLLCVSKEWVRKIERKATTKLKNEETVRNLSHYLD 559
+ER+++ LR+G+ + +SL EIG++ +SKE VR++E +A +LK L Y D
Sbjct: 487 KERRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMNSHGLHAYAD 544
BLAST of Carg08264 vs. ExPASy TrEMBL
Match:
A0A6J1HEX7 (RNA polymerase sigma factor sigC-like OS=Cucurbita moschata OX=3662 GN=LOC111462905 PE=3 SV=1)
HSP 1 Score: 1065.4 bits (2754), Expect = 7.8e-308
Identity = 553/558 (99.10%), Postives = 555/558 (99.46%), Query Frame = 0
Query: 1 MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE 60
MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE
Sbjct: 1 MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE 60
Query: 61 ALKTYTCLSEAPQTLADGLLDLEEKEIEINSGAKSLGHLRYGSKNSGPSKVEDNFCSCTS 120
ALKTYTCLSEAPQTLADGLLDLEEKEIEINSGAKSLGHLRYGSKNSGPSKVEDNFCSCTS
Sbjct: 61 ALKTYTCLSEAPQTLADGLLDLEEKEIEINSGAKSLGHLRYGSKNSGPSKVEDNFCSCTS 120
Query: 121 LPTGRASPFGMLMENLDVLEETFTESGMLSLERDILLQLTKLGALEFFNACLSRTLKASS 180
LPTGRASPFGMLMENLDVLEETFTESGMLSLERDI+LQLTKLGALEFFNACLSRTLKASS
Sbjct: 121 LPTGRASPFGMLMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNACLSRTLKASS 180
Query: 181 SFHDLSDLPIEVGGDHNVNQKTDDQNDNIVVYSGKRAGRRSVKRRAMDNADKVASRPLAT 240
SF DLSDLPIEVGGDHNVNQKTDDQNDNI+VYSGKRAGRRSVKRRAMDNADKVASRPLAT
Sbjct: 181 SFRDLSDLPIEVGGDHNVNQKTDDQNDNIIVYSGKRAGRRSVKRRAMDNADKVASRPLAT 240
Query: 241 RAAKEKFRSLRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETLEKESGRTASMSC 300
RAAKEKFRS RKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRET EKESGRTASMSC
Sbjct: 241 RAAKEKFRSSRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETSEKESGRTASMSC 300
Query: 301 WADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL 360
WADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL
Sbjct: 301 WADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL 360
Query: 361 QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS 420
QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS
Sbjct: 361 QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS 420
Query: 421 GRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT 480
GRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT
Sbjct: 421 GRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT 480
Query: 481 VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLCVSKEWVRKIERKA 540
VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLCVSKEWVRKIERKA
Sbjct: 481 VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLCVSKEWVRKIERKA 540
Query: 541 TTKLKNEETVRNLSHYLD 559
TTKLKNEETVRNLSHYLD
Sbjct: 541 TTKLKNEETVRNLSHYLD 558
BLAST of Carg08264 vs. ExPASy TrEMBL
Match:
A0A6J1KCF5 (RNA polymerase sigma factor sigC-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492024 PE=3 SV=1)
HSP 1 Score: 1051.6 bits (2718), Expect = 1.2e-303
Identity = 546/558 (97.85%), Postives = 551/558 (98.75%), Query Frame = 0
Query: 1 MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE 60
MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE
Sbjct: 1 MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE 60
Query: 61 ALKTYTCLSEAPQTLADGLLDLEEKEIEINSGAKSLGHLRYGSKNSGPSKVEDNFCSCTS 120
ALKTYTCLSEAPQTLADGLLDLEEKE+EINSGAKSL HL YGSKNSGPSKVEDNFCSCTS
Sbjct: 61 ALKTYTCLSEAPQTLADGLLDLEEKEVEINSGAKSLSHLHYGSKNSGPSKVEDNFCSCTS 120
Query: 121 LPTGRASPFGMLMENLDVLEETFTESGMLSLERDILLQLTKLGALEFFNACLSRTLKASS 180
LPTGRASPF MLMENLDVLEETFTESGMLSLERDI+LQLTKLGALEFFNACLSRTLKASS
Sbjct: 121 LPTGRASPFDMLMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNACLSRTLKASS 180
Query: 181 SFHDLSDLPIEVGGDHNVNQKTDDQNDNIVVYSGKRAGRRSVKRRAMDNADKVASRPLAT 240
SF DLSDLPIEVGGDHNVNQKTDDQN NI+VYSGKRAGRRSVKRRAMDNADKVASRPLAT
Sbjct: 181 SFRDLSDLPIEVGGDHNVNQKTDDQNHNIIVYSGKRAGRRSVKRRAMDNADKVASRPLAT 240
Query: 241 RAAKEKFRSLRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETLEKESGRTASMSC 300
RAAKEKFRS RKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETLEKESGRTASMSC
Sbjct: 241 RAAKEKFRSSRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETLEKESGRTASMSC 300
Query: 301 WADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL 360
WADA+SIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL
Sbjct: 301 WADASSIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL 360
Query: 361 QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS 420
QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS
Sbjct: 361 QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS 420
Query: 421 GRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT 480
GRRYSDDD+AKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT
Sbjct: 421 GRRYSDDDVAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT 480
Query: 481 VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLCVSKEWVRKIERKA 540
VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLL VSKEWVRKIERKA
Sbjct: 481 VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLRVSKEWVRKIERKA 540
Query: 541 TTKLKNEETVRNLSHYLD 559
TTKLKNEETVRNLSHYLD
Sbjct: 541 TTKLKNEETVRNLSHYLD 558
BLAST of Carg08264 vs. ExPASy TrEMBL
Match:
A0A6J1KA34 (RNA polymerase sigma factor sigC-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492024 PE=3 SV=1)
HSP 1 Score: 1043.1 bits (2696), Expect = 4.1e-301
Identity = 545/558 (97.67%), Postives = 549/558 (98.39%), Query Frame = 0
Query: 1 MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE 60
MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE
Sbjct: 1 MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE 60
Query: 61 ALKTYTCLSEAPQTLADGLLDLEEKEIEINSGAKSLGHLRYGSKNSGPSKVEDNFCSCTS 120
ALKTYTCLSEAPQTLADGLLDLEEK EINSGAKSL HL YGSKNSGPSKVEDNFCSCTS
Sbjct: 61 ALKTYTCLSEAPQTLADGLLDLEEK--EINSGAKSLSHLHYGSKNSGPSKVEDNFCSCTS 120
Query: 121 LPTGRASPFGMLMENLDVLEETFTESGMLSLERDILLQLTKLGALEFFNACLSRTLKASS 180
LPTGRASPF MLMENLDVLEETFTESGMLSLERDI+LQLTKLGALEFFNACLSRTLKASS
Sbjct: 121 LPTGRASPFDMLMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNACLSRTLKASS 180
Query: 181 SFHDLSDLPIEVGGDHNVNQKTDDQNDNIVVYSGKRAGRRSVKRRAMDNADKVASRPLAT 240
SF DLSDLPIEVGGDHNVNQKTDDQN NI+VYSGKRAGRRSVKRRAMDNADKVASRPLAT
Sbjct: 181 SFRDLSDLPIEVGGDHNVNQKTDDQNHNIIVYSGKRAGRRSVKRRAMDNADKVASRPLAT 240
Query: 241 RAAKEKFRSLRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETLEKESGRTASMSC 300
RAAKEKFRS RKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETLEKESGRTASMSC
Sbjct: 241 RAAKEKFRSSRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETLEKESGRTASMSC 300
Query: 301 WADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL 360
WADA+SIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL
Sbjct: 301 WADASSIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL 360
Query: 361 QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS 420
QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS
Sbjct: 361 QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS 420
Query: 421 GRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT 480
GRRYSDDD+AKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT
Sbjct: 421 GRRYSDDDVAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT 480
Query: 481 VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLCVSKEWVRKIERKA 540
VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLL VSKEWVRKIERKA
Sbjct: 481 VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLRVSKEWVRKIERKA 540
Query: 541 TTKLKNEETVRNLSHYLD 559
TTKLKNEETVRNLSHYLD
Sbjct: 541 TTKLKNEETVRNLSHYLD 556
BLAST of Carg08264 vs. ExPASy TrEMBL
Match:
A0A1S3BBM8 (RNA polymerase sigma factor sigC OS=Cucumis melo OX=3656 GN=LOC103488161 PE=3 SV=1)
HSP 1 Score: 923.7 bits (2386), Expect = 3.7e-265
Identity = 482/562 (85.77%), Postives = 517/562 (91.99%), Query Frame = 0
Query: 1 MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE 60
MGT FRPNLKW FQIQTHS + SPSKLSPYASKGREA+FNSGRLSFFSS CEEGE+I RE
Sbjct: 2 MGTCFRPNLKWGFQIQTHSLKNSPSKLSPYASKGREAAFNSGRLSFFSSICEEGESIPRE 61
Query: 61 ALKTYTCLSEAPQTLADGLLDLEEKEIEINSGAKSLGHLRYGSKNSGPSKVEDNFCSCTS 120
LKTYTCLSEAPQT D LL+LE EIE+NSGAKSL L YG K++ PSKVEDNF S TS
Sbjct: 62 TLKTYTCLSEAPQTSPDDLLNLE--EIEMNSGAKSLSSLHYGIKSTRPSKVEDNFSSPTS 121
Query: 121 LPTGRASPFGMLMENLDVLEETFTESGMLSLERDILLQLTKLGALEFFNACLSRTLKASS 180
+PTG+ASPFG+LMENLDVLEETF ESGMLSLERDI+LQLTKLGALEFFN CLSRTLK +S
Sbjct: 122 MPTGKASPFGILMENLDVLEETFAESGMLSLERDIVLQLTKLGALEFFNTCLSRTLK-TS 181
Query: 181 SFHDLSDLPIEVGGDHNVNQKTDDQNDNIVVYSGKRAGRRSVKRRAMDNADKVASRPLAT 240
SFHDLSDLP+E G DHNVNQKT+DQN ++ VYSGKRAGRRSVK+RAMDNADKVASRPLAT
Sbjct: 182 SFHDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSGKRAGRRSVKKRAMDNADKVASRPLAT 241
Query: 241 RAAKEKFRS----LRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETLEKESGRTA 300
RA KEK S RKK+SNS KRR +VARNEAEMSTG+KVVANLERIRETLEKESGR A
Sbjct: 242 RAVKEKIHSSTIFSRKKSSNSSKRRLVVARNEAEMSTGIKVVANLERIRETLEKESGRIA 301
Query: 301 SMSCWADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGA 360
SMSCWA+AAS+DIKDLQKQLQFGWFC+DELLRSTNSLV+FLAKKYRCSGLPMEDLVQAGA
Sbjct: 302 SMSCWAEAASVDIKDLQKQLQFGWFCRDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGA 361
Query: 361 IGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKA 420
+GVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVAR+SRGIQIPWSLTKAINQIQKARK
Sbjct: 362 LGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKV 421
Query: 421 LNNSGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIES 480
LN GRRYSDDDIA+ATGLPLAKVRVASNCLKVVGSVDQK+GDGLNMKYME TADTSI+S
Sbjct: 422 LNQGGRRYSDDDIARATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADTSIQS 481
Query: 481 PEDTVKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLCVSKEWVRKI 540
PE+TVKR+LMKKDIFN+L+ LESRERQVLVLRYGLMD QPKSLEEIGKLL VSKEWVRKI
Sbjct: 482 PEETVKRKLMKKDIFNILQGLESRERQVLVLRYGLMDFQPKSLEEIGKLLHVSKEWVRKI 541
Query: 541 ERKATTKLKNEETVRNLSHYLD 559
E+KA TKLKNEETV+NLSHYLD
Sbjct: 542 EKKAMTKLKNEETVKNLSHYLD 560
BLAST of Carg08264 vs. ExPASy TrEMBL
Match:
A0A6J1BRC1 (RNA polymerase sigma factor sigC isoform X1 OS=Momordica charantia OX=3673 GN=LOC111004887 PE=3 SV=1)
HSP 1 Score: 898.7 bits (2321), Expect = 1.3e-257
Identity = 473/563 (84.01%), Postives = 503/563 (89.34%), Query Frame = 0
Query: 1 MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE 60
MGTSFRPNLKWAFQ+QTHSR SPSK P+ASKGREASFNS RLSFFS+ CEEGE+ SRE
Sbjct: 1 MGTSFRPNLKWAFQMQTHSRNCSPSKFYPHASKGREASFNSARLSFFSAICEEGESSSRE 60
Query: 61 ALKTYTCLSEAPQTLADGLLDLEEKEIEINSGAKSLGHLRYGSKNSGPSKVEDNFCSCTS 120
LKTYTCLSEAPQT AD LLDL+ EIEINS A+ L H YG KN+GPSK+EDNF SCTS
Sbjct: 61 TLKTYTCLSEAPQTSADDLLDLD--EIEINSRARPLSHFHYGIKNTGPSKIEDNFSSCTS 120
Query: 121 LPTGRASPFGMLMENLDVLEETFTESGMLSLERDILLQLTKLGALEFFNACLSRTLKAS- 180
LPTG+AS FGMLMENLDVLEE FTESGMLSLERDI+LQLTKLGALEFFN CLSRTLK S
Sbjct: 121 LPTGKASHFGMLMENLDVLEEAFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTST 180
Query: 181 SSFHDLSDLPIEVGGDHNVNQKTDDQNDNIVVYSGKRAGRRSVKRRAMDNADKVASRPLA 240
SSF DLSDLPIE GG HNVNQKTD QND+I+VYSGK+ GRRS+K RA D ADKVAS+P A
Sbjct: 181 SSFLDLSDLPIEDGGGHNVNQKTDRQNDDIIVYSGKKVGRRSIKERARDKADKVASQPPA 240
Query: 241 TRAAKEKF----RSLRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETLEKESGRT 300
T AAKEKF R RK+ NS++RR +VARNEAEMSTGVKVVANLERIRETLEKES +
Sbjct: 241 TGAAKEKFHNSARFPRKRVFNSRRRRLMVARNEAEMSTGVKVVANLERIRETLEKESEKR 300
Query: 301 ASMSCWADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAG 360
ASMSCWADAA IDIKDL KQLQFGWFCQ+ELLRSTNSLV+FLAKKYRC+GLPMEDLVQAG
Sbjct: 301 ASMSCWADAAGIDIKDLHKQLQFGWFCQNELLRSTNSLVLFLAKKYRCTGLPMEDLVQAG 360
Query: 361 AIGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARK 420
AIGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVAR+SRGIQIPWSLTKAINQIQKARK
Sbjct: 361 AIGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARK 420
Query: 421 ALNNSGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIE 480
ALNN RRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQK+GDGLNMKYME TADTSI+
Sbjct: 421 ALNNGSRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADTSIQ 480
Query: 481 SPEDTVKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLCVSKEWVRK 540
SPE+TVK++LMKKDIFNLLE LE RERQVL LRYGL D QPKSLEEIGKLL VSKEWVRK
Sbjct: 481 SPEETVKQKLMKKDIFNLLEGLEPRERQVLALRYGLQDFQPKSLEEIGKLLHVSKEWVRK 540
Query: 541 IERKATTKLKNEETVRNLSHYLD 559
IE+KA TKLKNEET NL HYLD
Sbjct: 541 IEKKAMTKLKNEETTGNLCHYLD 561
BLAST of Carg08264 vs. TAIR 10
Match:
AT3G53920.1 (RNApolymerase sigma-subunit C )
HSP 1 Score: 398.7 bits (1023), Expect = 7.9e-111
Identity = 235/521 (45.11%), Postives = 329/521 (63.15%), Query Frame = 0
Query: 43 RLSFFSSTCEEGEAISREALKTYTCLSEAPQTLADGLLDLEEKEIEINSGAKSLGHLRYG 102
R SF SS EE ++LK C S +P T + + L+
Sbjct: 84 RWSFLSSVKEESRIYQNDSLKACGCASVSPYTAQNNV----------------YVELKDP 143
Query: 103 SKNSGPSKVEDNFCSCTSLPTGRASPFGMLMENLDVLEETFTESGMLSLERDILLQLTKL 162
+N G E ++ S + L + +L +NL LEETF + +ERDI+LQ+ KL
Sbjct: 144 KENIGVGSAERSYSSRSML------QYNLLAKNLLALEETFVALDSVRMERDIMLQMGKL 203
Query: 163 GALEFFNACLSRTLKASSSFHDLSDLPIEVGGDHNVNQKTDDQNDNIVVYSGKRAGRRSV 222
GA E F CLSR + SS LSD + D + V S +R ++
Sbjct: 204 GAAELFKTCLSR-YRGSSITSCLSD----------TTELVDTTPNQQVFVSSRRKVKKKA 263
Query: 223 KRRAM--DNADKVASRPLATRAAKEKFRSLR-KKASNSKKRRSIVARNEAEMSTGVKVVA 282
+R ++ +N D+ +S P+ R R ++ +K+R ++RNE EMSTGVK+VA
Sbjct: 264 RRSSVTAENGDQ-SSLPIGLRTTWNNIDVPRVRRPPKYRKKRERISRNETEMSTGVKIVA 323
Query: 283 NLERIRETLEKESGRTASMSCWADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAK 342
++ERIR LE+ESG+ AS+SCWA AA ++ K L + L +GW+C+DEL++ST SLV+FLA+
Sbjct: 324 DMERIRTQLEEESGKVASLSCWAAAAGMNEKLLMRNLHYGWYCRDELVKSTRSLVLFLAR 383
Query: 343 KYRCSGLPMEDLVQAGAIGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQI 402
YR G+ EDL+QAG +GVLQG ERFD RG++FSTY+QYWIRKSMS +V+R +RG+ I
Sbjct: 384 NYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHI 443
Query: 403 PWSLTKAINQIQKARKALNNS-GRRY-SDDDIAKATGLPLAKVRVASNCLKVVGSVDQKI 462
P S+ + IN IQKARK L S G +Y +D++IAK TG + K+R A+ CLKVVGS+D+K+
Sbjct: 444 PSSIIRTINHIQKARKTLKTSHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKV 503
Query: 463 GDGLNMKYMELTADTSIESPEDTVKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPK 522
GD K++E T DT++ESPE+ V R+ ++DI +LLE LE RE+QV+VLRYGL D +PK
Sbjct: 504 GDCFTTKFLEFTPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPK 563
Query: 523 SLEEIGKLLCVSKEWVRKIERKATTKLKNEETVRNLSHYLD 559
SLEEIGKLL VSKEW+RKIER+A KL+++ +L +YL+
Sbjct: 564 SLEEIGKLLKVSKEWIRKIERRAMAKLRDQPNAEDLRYYLN 570
BLAST of Carg08264 vs. TAIR 10
Match:
AT1G08540.1 (RNApolymerase sigma subunit 2 )
HSP 1 Score: 210.3 bits (534), Expect = 4.0e-54
Identity = 131/403 (32.51%), Postives = 238/403 (59.06%), Query Frame = 0
Query: 169 NACLSRTLKASSSFHD-LSDLPIEVGGDHNVNQKTDDQNDNIVVYSGKRAGRRSVKRRAM 228
N +S + AS+S + + DL E V + + ++ V S ++ R++ + + +
Sbjct: 171 NGIVSDKITASASNKESIGDLESE--KQEEVELLEEQPSVSLAVRSTRQTERKARRAKGL 230
Query: 229 DN------ADKVASRPLATRAAKEK------FRSLRKKASNSKKRRSIVARNEAEMSTGV 288
+ + K S P R ++ R LR S+SK + R E E+S G+
Sbjct: 231 EKTASGIPSVKTGSSPKKKRLVAQEVDHNDPLRYLRMTTSSSK---LLTVREEHELSAGI 290
Query: 289 KVVANLERIRETLEKESGRTASMSCWADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVI 348
+ + LER++ L + SGR + + WA AA +D K L++++ G C+D++++S LVI
Sbjct: 291 QDLLKLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQRIHHGTLCKDKMIKSNIRLVI 350
Query: 349 FLAKKYRCSGLPMEDLVQAGAIGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSR 408
+AK Y+ +G+ ++DLVQ G G+++G E+FD +GF+FSTY +WI++++ + ++ SR
Sbjct: 351 SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSR 410
Query: 409 GIQIPWSLTKAINQIQKARKAL-NNSGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVD 468
I++P+ + +A ++++ARK L + +G+ +++IA+ATGL + ++ K S+D
Sbjct: 411 MIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLSMKRLMAVLLSPKPPRSLD 470
Query: 469 QKIGDGLNMKYMELTADTSIESPEDTVKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDS 528
QKIG N+K E+ AD + ED + + M++D+ +L+ L +RE+QV+ R+G+ D
Sbjct: 471 QKIGMNQNLKPSEVIADPEAVTSEDILIKEFMRQDLDKVLDSLGTREKQVIRWRFGMEDG 530
Query: 529 QPKSLEEIGKLLCVSKEWVRKIERKATTKLKNEETVRNLSHYL 558
+ K+L+EIG+++ VS+E VR+IE A KLKN++ +L YL
Sbjct: 531 RMKTLQEIGEMMGVSRERVRQIESSAFRKLKNKKRNNHLQQYL 568
BLAST of Carg08264 vs. TAIR 10
Match:
AT2G36990.1 (RNApolymerase sigma-subunit F )
HSP 1 Score: 168.3 bits (425), Expect = 1.7e-41
Identity = 107/359 (29.81%), Postives = 205/359 (57.10%), Query Frame = 0
Query: 210 VVYSGKRAGRRSVKRRA--MDNADKVASRPLATRAAKEKFR-------SLRKKASNSKKR 269
+V S ++ RR+ RRA ++ D P T +AK+K++ +L+ + +
Sbjct: 187 IVRSKRQLERRAKNRRAPKSNDVDDEGYVPQKT-SAKKKYKQGADNDDALQLFLWGPETK 246
Query: 270 RSIVARNEAEMSTGVKVVANLERIRETLEKESGRTASMSCWADAASIDIKDLQKQLQFGW 329
+ + A+ EAE+ + ++ + LE+++ LE ++G ++ WA+A I L+ + G
Sbjct: 247 QLLTAKEEAELISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVLKSDIHRGR 306
Query: 330 FCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVLQGVERFDPKRGFRFSTYIQY 389
+++L+ + LV+ +AK+Y+ GL +DL+Q G++G+++ VE+F P+ G RF+TY +
Sbjct: 307 SSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYW 366
Query: 390 WIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNSGR-RYSDDDIAKATGLPLAK 449
WIR+S+ + + ++SR I++P ++ + ++ +ARK G R S +++A G+ K
Sbjct: 367 WIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEELAGHVGVSTEK 426
Query: 450 VRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDTVKRRLMKKDIFNLLEVLES 509
+ + S+ Q I + + E+T D+ IE+P +V ++LM+ + NLL VL
Sbjct: 427 LDKLLYNTRTPLSMQQPIWSDQDTTFQEITPDSGIETPTMSVGKQLMRNHVRNLLNVLSP 486
Query: 510 RERQVLVLRYGLMDSQPKSLEEIGKLLCVSKEWVRKIERKATTKLKNEETVRNLSHYLD 559
+ER+++ LR+G+ + +SL EIG++ +SKE VR++E +A +LK L Y D
Sbjct: 487 KERRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMNSHGLHAYAD 544
BLAST of Carg08264 vs. TAIR 10
Match:
AT5G13730.1 (sigma factor 4 )
HSP 1 Score: 146.0 bits (367), Expect = 9.2e-35
Identity = 86/235 (36.60%), Postives = 136/235 (57.87%), Query Frame = 0
Query: 323 QDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVLQGVERFDPKRGFRFSTYIQYWI 382
++++ R LV+ +A Y+ GL ++DL+Q G+IG+L+G ERFDP RG++ STY+ +WI
Sbjct: 180 REKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWI 239
Query: 383 RKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNSGRRY-SDDDIAKATGLPLAKVR 442
++++ R +A SR +++P S+ + ++ +A L RR S ++IA+ L ++ VR
Sbjct: 240 KQAILRAIAHKSRLVKLPGSMWELTAKVAEASNVLTRKLRRQPSCEEIAEHLNLNVSAVR 299
Query: 443 VASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDTVKRRLMKKDIFNLLEVLESRE 502
+A + S+D+ M E+ PE+ VKR MK +I LL L +RE
Sbjct: 300 LAVERSRSPVSLDRVASQNGRMTLQEIVRGPDETRPEEMVKREHMKHEIEQLLGSLTARE 359
Query: 503 RQVLVLRYGLMDSQPKSLEEIGKLLCVSKEWVRKIERKATTKLKNEETVRNLSHY 557
+VL L +GL P S EEIGK L +S+E VR+I A KL+N V +L Y
Sbjct: 360 SRVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIALKKLRNVHNVNDLKIY 414
BLAST of Carg08264 vs. TAIR 10
Match:
AT1G64860.1 (sigma factor A )
HSP 1 Score: 114.0 bits (284), Expect = 3.9e-25
Identity = 126/496 (25.40%), Postives = 226/496 (45.56%), Query Frame = 0
Query: 81 DLEEKEIEINSGAKSLGHLRYGSKNSGPSKVEDNFCSCTSLPTGRASPFGMLMENLDVL- 140
D+ EK + +N S H+ +K+ +K N+ L E++DV
Sbjct: 24 DVTEKFLSVNDHCSSQYHIA-STKSGITAKKASNYSPSFPSSNRHTQSAKALKESVDVAS 83
Query: 141 ---------------EETFTESGMLSLERDILLQLTKLGALEFFNACLSRTLKASSSFHD 200
EE + + ++S + +L L K + +N KA SS
Sbjct: 84 TEKPWLPNGTDKELEEECYDDDDLISHSVEAILLLQKSMLEKSWNLSFE---KAVSS--- 143
Query: 201 LSDLPIEVGGDHNVNQKTDDQNDNIVVYSGKRAGRRSVKRRAMDNADKVASRPLATRAAK 260
E G + +K ++ SG A +R + + N V + ++ ++
Sbjct: 144 ------EYPGKGTIRKK----KIPVITCSGISARQRRIGAKKKTNMTHV--KAVSDVSSG 203
Query: 261 EKFRSLRKKASNSKKRRSI-VARNEAEMSTGVKVVANLERIRETLEKESGRTASMSCWAD 320
++ R K + + V R ++ +G+++ + R+++ L G S A
Sbjct: 204 KQVRGYVKGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSRLKDRL----GCEPSDEQLAV 263
Query: 321 AASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVLQGV 380
+ I +LQ L +++L S LV+ +A++Y G M DLVQ G IG+L+G+
Sbjct: 264 SLKISRAELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNLGAEMSDLVQGGLIGLLRGI 323
Query: 381 ERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNSGRR 440
E+FD +GFR STY+ +WIR+ +SR + +SR +++P L + + I+ A+ L G
Sbjct: 324 EKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGIT 383
Query: 441 YSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLN----MKYMELTADTSIE-SPE 500
S D IA++ + KVR A+ + V S+D+ LN + ADT +E +P
Sbjct: 384 PSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADTRLENNPW 443
Query: 501 DTVKRRLMKKDIFNLLE-VLESRERQVLVLRYGLMDSQPKSLEEIGKLLCVSKEWVRKIE 554
+K+++ L+ L RE++++ L YGL D + + E+I K + +S+E VR++
Sbjct: 444 HGYDDLALKEEVSKLISATLGEREKEIIRLYYGL-DKECLTWEDISKRIGLSRERVRQVG 495
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7029701.1 | 4.3e-310 | 100.00 | RNA polymerase sigma factor sigC [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_022962483.1 | 1.6e-307 | 99.10 | RNA polymerase sigma factor sigC-like [Cucurbita moschata] | [more] |
XP_023546255.1 | 1.5e-305 | 98.75 | RNA polymerase sigma factor sigC-like [Cucurbita pepo subsp. pepo] | [more] |
XP_022996943.1 | 2.4e-303 | 97.85 | RNA polymerase sigma factor sigC-like isoform X1 [Cucurbita maxima] | [more] |
XP_022996944.1 | 8.6e-301 | 97.67 | RNA polymerase sigma factor sigC-like isoform X2 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
O24621 | 1.1e-109 | 45.11 | RNA polymerase sigma factor sigC OS=Arabidopsis thaliana OX=3702 GN=SIGC PE=2 SV... | [more] |
O22056 | 5.6e-53 | 32.51 | RNA polymerase sigma factor sigB OS=Arabidopsis thaliana OX=3702 GN=SIGB PE=2 SV... | [more] |
P38023 | 2.4e-43 | 33.33 | RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942 / ... | [more] |
P26683 | 1.2e-42 | 31.33 | RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UT... | [more] |
Q9LD95 | 2.4e-40 | 29.81 | RNA polymerase sigma factor sigF, chloroplastic OS=Arabidopsis thaliana OX=3702 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HEX7 | 7.8e-308 | 99.10 | RNA polymerase sigma factor sigC-like OS=Cucurbita moschata OX=3662 GN=LOC111462... | [more] |
A0A6J1KCF5 | 1.2e-303 | 97.85 | RNA polymerase sigma factor sigC-like isoform X1 OS=Cucurbita maxima OX=3661 GN=... | [more] |
A0A6J1KA34 | 4.1e-301 | 97.67 | RNA polymerase sigma factor sigC-like isoform X2 OS=Cucurbita maxima OX=3661 GN=... | [more] |
A0A1S3BBM8 | 3.7e-265 | 85.77 | RNA polymerase sigma factor sigC OS=Cucumis melo OX=3656 GN=LOC103488161 PE=3 SV... | [more] |
A0A6J1BRC1 | 1.3e-257 | 84.01 | RNA polymerase sigma factor sigC isoform X1 OS=Momordica charantia OX=3673 GN=LO... | [more] |