Carg08240 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08240
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	AT-hook motif nuclear-localized protein
Location	Carg_Chr05: 2875366 .. 2876181 (+)
RNA-Seq Expression	Carg08240
Synteny	Carg08240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTATCCAAATTTCATCTCAGTCGTCACTTTACCCACCCTCCGCCCCATCAACCGGAGGATGAACCTACCGCCGCCGTGCCTTTGCCGTTCAAACCCCTCCCGGAATCAATCTCTGCCGCCGATGATTCCACCATCGAGGTGGTCCGGCGGCCTAGGGGTCGCCCACCGGGCTCCAAAAACAAACCGAAACCGCCTCTCGTCATAACCCGGGAACCCGAACCGACTATGCGGCCGTACGTTCTAGAAGTGCCTGGTGGAAACGACGTCGTTGAAGCTATTTTGCGATTTTGCCGTCAGAAAAATACGGCCCTTTGTGTTCTTAACGGCTCCGGTACCGTTGCTAATGTCTCTCTCCATCAACCCTCCGCTACCCCTAGCGCCACCGTCACATTTCACGGCTGTTTTGAGATCCTCTCCATTTCCGCCACCGTGTTTCCTGAAACGATGTCGTTTCCTGTCCCTAATGGTTTCACCATCTCCCTCGCTGGACATCAGGGTCAAATCGTCGGCGGTATGGTTGCCGGCGCCTTAATCTCTGCCGGTACAGTTTTCGTCATCGCCTCGTCGTTCAACAATCCGATGTACCTCCGGCTTCCCGAACTGGATGAGCTCAAGAATTCGGAATCCGGCGGCGGCGAAGTTCACTCCCCCCATGTCTCCGTCGCCGGAGATAGTAGCGGGCACCGACCCGGGCAGAGTCGAGGGCGCGGGCAGCTTGTTGAATCCCACGGAATGGCTTTAATGAGTTGCCACGCGCCGTCCGACGTAGTATGGGCGCCGACGGCGAGACAACCGCCACCGCCGCCGTACTAA

mRNA sequence

ATGTTATCCAAATTTCATCTCAGTCGTCACTTTACCCACCCTCCGCCCCATCAACCGGAGGATGAACCTACCGCCGCCGTGCCTTTGCCGTTCAAACCCCTCCCGGAATCAATCTCTGCCGCCGATGATTCCACCATCGAGGTGGTCCGGCGGCCTAGGGGTCGCCCACCGGGCTCCAAAAACAAACCGAAACCGCCTCTCGTCATAACCCGGGAACCCGAACCGACTATGCGGCCGTACGTTCTAGAAGTGCCTGGTGGAAACGACGTCGTTGAAGCTATTTTGCGATTTTGCCGTCAGAAAAATACGGCCCTTTGTGTTCTTAACGGCTCCGGTACCGTTGCTAATGTCTCTCTCCATCAACCCTCCGCTACCCCTAGCGCCACCGTCACATTTCACGGCTGTTTTGAGATCCTCTCCATTTCCGCCACCGTGTTTCCTGAAACGATGTCGTTTCCTGTCCCTAATGGTTTCACCATCTCCCTCGCTGGACATCAGGGTCAAATCGTCGGCGGTATGGTTGCCGGCGCCTTAATCTCTGCCGGTACAGTTTTCGTCATCGCCTCGTCGTTCAACAATCCGATGTACCTCCGGCTTCCCGAACTGGATGAGCTCAAGAATTCGGAATCCGGCGGCGGCGAAGTTCACTCCCCCCATGTCTCCGTCGCCGGAGATAGTAGCGGGCACCGACCCGGGCAGAGTCGAGGGCGCGGGCAGCTTGTTGAATCCCACGGAATGGCTTTAATGAGTTGCCACGCGCCGTCCGACGTAGTATGGGCGCCGACGGCGAGACAACCGCCACCGCCGCCGTACTAA

Coding sequence (CDS)

ATGTTATCCAAATTTCATCTCAGTCGTCACTTTACCCACCCTCCGCCCCATCAACCGGAGGATGAACCTACCGCCGCCGTGCCTTTGCCGTTCAAACCCCTCCCGGAATCAATCTCTGCCGCCGATGATTCCACCATCGAGGTGGTCCGGCGGCCTAGGGGTCGCCCACCGGGCTCCAAAAACAAACCGAAACCGCCTCTCGTCATAACCCGGGAACCCGAACCGACTATGCGGCCGTACGTTCTAGAAGTGCCTGGTGGAAACGACGTCGTTGAAGCTATTTTGCGATTTTGCCGTCAGAAAAATACGGCCCTTTGTGTTCTTAACGGCTCCGGTACCGTTGCTAATGTCTCTCTCCATCAACCCTCCGCTACCCCTAGCGCCACCGTCACATTTCACGGCTGTTTTGAGATCCTCTCCATTTCCGCCACCGTGTTTCCTGAAACGATGTCGTTTCCTGTCCCTAATGGTTTCACCATCTCCCTCGCTGGACATCAGGGTCAAATCGTCGGCGGTATGGTTGCCGGCGCCTTAATCTCTGCCGGTACAGTTTTCGTCATCGCCTCGTCGTTCAACAATCCGATGTACCTCCGGCTTCCCGAACTGGATGAGCTCAAGAATTCGGAATCCGGCGGCGGCGAAGTTCACTCCCCCCATGTCTCCGTCGCCGGAGATAGTAGCGGGCACCGACCCGGGCAGAGTCGAGGGCGCGGGCAGCTTGTTGAATCCCACGGAATGGCTTTAATGAGTTGCCACGCGCCGTCCGACGTAGTATGGGCGCCGACGGCGAGACAACCGCCACCGCCGCCGTACTAA

Protein sequence

MLSKFHLSRHFTHPPPHQPEDEPTAAVPLPFKPLPESISAADDSTIEVVRRPRGRPPGSKNKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCVLNGSGTVANVSLHQPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALISAGTVFVIASSFNNPMYLRLPELDELKNSESGGGEVHSPHVSVAGDSSGHRPGQSRGRGQLVESHGMALMSCHAPSDVVWAPTARQPPPPPY

Homology

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BLAST of Carg08240 vs. NCBI nr
Match: KAG7029679.1 (AT-hook motif nuclear-localized protein 17, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 545.0 bits (1403), Expect = 3.6e-151
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MLSKFHLSRHFTHPPPHQPEDEPTAAVPLPFKPLPESISAADDSTIEVVRRPRGRPPGSK 60
           MLSKFHLSRHFTHPPPHQPEDEPTAAVPLPFKPLPESISAADDSTIEVVRRPRGRPPGSK
Sbjct: 1   MLSKFHLSRHFTHPPPHQPEDEPTAAVPLPFKPLPESISAADDSTIEVVRRPRGRPPGSK 60

Query: 61  NKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCVLNGSGTVANVSLH 120
           NKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCVLNGSGTVANVSLH
Sbjct: 61  NKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCVLNGSGTVANVSLH 120

Query: 121 QPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALIS 180
           QPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALIS
Sbjct: 121 QPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALIS 180

Query: 181 AGTVFVIASSFNNPMYLRLPELDELKNSESGGGEVHSPHVSVAGDSSGHRPGQSRGRGQL 240
           AGTVFVIASSFNNPMYLRLPELDELKNSESGGGEVHSPHVSVAGDSSGHRPGQSRGRGQL
Sbjct: 181 AGTVFVIASSFNNPMYLRLPELDELKNSESGGGEVHSPHVSVAGDSSGHRPGQSRGRGQL 240

Query: 241 VESHGMALMSCHAPSDVVWAPTARQPPPPPY 272
           VESHGMALMSCHAPSDVVWAPTARQPPPPPY
Sbjct: 241 VESHGMALMSCHAPSDVVWAPTARQPPPPPY 271

[Close]

BLAST of Carg08240 vs. NCBI nr
Match: XP_022962200.1 (AT-hook motif nuclear-localized protein 17-like [Cucurbita moschata])

HSP 1 Score: 537.0 bits (1382), Expect = 9.7e-149
Identity = 268/271 (98.89%), Postives = 268/271 (98.89%), Query Frame = 0


Query: 1   MLSKFHLSRHFTHPPPHQPEDEPTAAVPLPFKPLPESISAADDSTIEVVRRPRGRPPGSK 60
           MLSKFHLSRHFTHPPPHQPEDEPTAAVPLPFKPLPE ISAADDSTIEVVRRPRGRPPGSK
Sbjct: 1   MLSKFHLSRHFTHPPPHQPEDEPTAAVPLPFKPLPEPISAADDSTIEVVRRPRGRPPGSK 60

Query: 61  NKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCVLNGSGTVANVSLH 120
           NKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCVLNGSGTVANVSL 
Sbjct: 61  NKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCVLNGSGTVANVSLR 120

Query: 121 QPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALIS 180
           QPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALIS
Sbjct: 121 QPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALIS 180

Query: 181 AGTVFVIASSFNNPMYLRLPELDELKNSESGGGEVHSPHVSVAGDSSGHRPGQSRGRGQL 240
           AGTVFVIASSFNNPMYLRLPELDELKNSESGGGEVHSPHVSVAGDSSGHRPGQSRGRGQL
Sbjct: 181 AGTVFVIASSFNNPMYLRLPELDELKNSESGGGEVHSPHVSVAGDSSGHRPGQSRGRGQL 240

Query: 241 VESHGMALMSCHAPSDVVWAPTARQPPPPPY 272
           VES GMALMSCHAPSDVVWAPTARQPPPPPY
Sbjct: 241 VESRGMALMSCHAPSDVVWAPTARQPPPPPY 271

[Close]

BLAST of Carg08240 vs. NCBI nr
Match: XP_023546815.1 (AT-hook motif nuclear-localized protein 17-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 528.1 bits (1359), Expect = 4.5e-146
Identity = 264/271 (97.42%), Postives = 266/271 (98.15%), Query Frame = 0


Query: 1   MLSKFHLSRHFTHPPPHQPEDEPTAAVPLPFKPLPESISAADDSTIEVVRRPRGRPPGSK 60
           MLSKFHLSRHFTHPPPHQ EDEPTAA+PLPFKPLPE ISAADDSTIEVVRRPRGRPPGSK
Sbjct: 1   MLSKFHLSRHFTHPPPHQLEDEPTAAMPLPFKPLPEPISAADDSTIEVVRRPRGRPPGSK 60

Query: 61  NKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCVLNGSGTVANVSLH 120
           NKPKPPLVITREPEPTMRPYVLEV GGNDVVEAILRFCRQKNTALCVLNGSGTVANVSL 
Sbjct: 61  NKPKPPLVITREPEPTMRPYVLEVAGGNDVVEAILRFCRQKNTALCVLNGSGTVANVSLR 120

Query: 121 QPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALIS 180
           QPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALIS
Sbjct: 121 QPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALIS 180

Query: 181 AGTVFVIASSFNNPMYLRLPELDELKNSESGGGEVHSPHVSVAGDSSGHRPGQSRGRGQL 240
           AGTVFVIASSFNNPMYLRLPELDELKNSESGGGEVHSPHVSVAGDSSGHRPGQSRGRGQL
Sbjct: 181 AGTVFVIASSFNNPMYLRLPELDELKNSESGGGEVHSPHVSVAGDSSGHRPGQSRGRGQL 240

Query: 241 VESHGMALMSCHAPSDVVWAPTARQPPPPPY 272
           VES GMA+MSCHAPSDVVWAPTARQPPPPPY
Sbjct: 241 VESRGMAIMSCHAPSDVVWAPTARQPPPPPY 271

[Close]

BLAST of Carg08240 vs. NCBI nr
Match: KAG6598735.1 (AT-hook motif nuclear-localized protein 17, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 527.7 bits (1358), Expect = 5.9e-146
Identity = 263/264 (99.62%), Postives = 263/264 (99.62%), Query Frame = 0


Query: 8   SRHFTHPPPHQPEDEPTAAVPLPFKPLPESISAADDSTIEVVRRPRGRPPGSKNKPKPPL 67
           SRHFTHPPPHQPEDEPTAAVPLPFKPLPESISAADDSTIEVVRRPRGRPPGSKNKPKPPL
Sbjct: 133 SRHFTHPPPHQPEDEPTAAVPLPFKPLPESISAADDSTIEVVRRPRGRPPGSKNKPKPPL 192

Query: 68  VITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCVLNGSGTVANVSLHQPSATPS 127
           VITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCVLNGSGTVANVSL QPSATPS
Sbjct: 193 VITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCVLNGSGTVANVSLRQPSATPS 252

Query: 128 ATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALISAGTVFVI 187
           ATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALISAGTVFVI
Sbjct: 253 ATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALISAGTVFVI 312

Query: 188 ASSFNNPMYLRLPELDELKNSESGGGEVHSPHVSVAGDSSGHRPGQSRGRGQLVESHGMA 247
           ASSFNNPMYLRLPELDELKNSESGGGEVHSPHVSVAGDSSGHRPGQSRGRGQLVESHGMA
Sbjct: 313 ASSFNNPMYLRLPELDELKNSESGGGEVHSPHVSVAGDSSGHRPGQSRGRGQLVESHGMA 372

Query: 248 LMSCHAPSDVVWAPTARQPPPPPY 272
           LMSCHAPSDVVWAPTARQPPPPPY
Sbjct: 373 LMSCHAPSDVVWAPTARQPPPPPY 396

[Close]

BLAST of Carg08240 vs. NCBI nr
Match: XP_022997238.1 (AT-hook motif nuclear-localized protein 28-like [Cucurbita maxima])

HSP 1 Score: 526.6 bits (1355), Expect = 1.3e-145
Identity = 263/271 (97.05%), Postives = 264/271 (97.42%), Query Frame = 0


Query: 1   MLSKFHLSRHFTHPPPHQPEDEPTAAVPLPFKPLPESISAADDSTIEVVRRPRGRPPGSK 60
           MLSKFHLS HFTHPPPHQPEDEPTAAVPLPFKPLPESISAADDSTIEV+RRPRGRPPGSK
Sbjct: 1   MLSKFHLSHHFTHPPPHQPEDEPTAAVPLPFKPLPESISAADDSTIEVIRRPRGRPPGSK 60

Query: 61  NKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCVLNGSGTVANVSLH 120
           NKPK PLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNT LCVLNGSGTVANVSL 
Sbjct: 61  NKPKLPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTGLCVLNGSGTVANVSLR 120

Query: 121 QPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALIS 180
           QPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALIS
Sbjct: 121 QPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALIS 180

Query: 181 AGTVFVIASSFNNPMYLRLPELDELKNSESGGGEVHSPHVSVAGDSSGHRPGQSRGRGQL 240
           AGTVFVIASSFNNPMYLRLPELDELKNSESG GEVHSPHVSVAGDSSGHRPGQSRG GQL
Sbjct: 181 AGTVFVIASSFNNPMYLRLPELDELKNSESGSGEVHSPHVSVAGDSSGHRPGQSRGSGQL 240

Query: 241 VESHGMALMSCHAPSDVVWAPTARQPPPPPY 272
           VES GMALMSCHAPSDVVWAPTARQPPPPPY
Sbjct: 241 VESRGMALMSCHAPSDVVWAPTARQPPPPPY 271

[Close]

BLAST of Carg08240 vs. ExPASy Swiss-Prot
Match: Q9LTA2 (AT-hook motif nuclear-localized protein 17 OS=Arabidopsis thaliana OX=3702 GN=AHL17 PE=2 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 2.3e-68
Identity = 143/234 (61.11%), Postives = 174/234 (74.36%), Query Frame = 0


Query: 42  DDSTIEVVRRPRGRPPGSKNKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQK 101
           DDS+IEVVRRPRGRPPGSKNKPKPP+ +TR+ +P M PY+LEVP GNDVVEAI RFCR+K
Sbjct: 48  DDSSIEVVRRPRGRPPGSKNKPKPPVFVTRDTDPPMSPYILEVPSGNDVVEAINRFCRRK 107

Query: 102 NTALCVLNGSGTVANVSLHQPS-ATPSATVTFHGCFEILSISATVFP----ETMSFPVPN 161
           +  +CVL+GSG+VANV+L QPS A   +T+TFHG F++LS+SAT  P     ++S PV N
Sbjct: 108 SIGVCVLSGSGSVANVTLRQPSPAALGSTITFHGKFDLLSVSATFLPPPPRTSLSPPVSN 167

Query: 162 GFTISLAGHQGQIVGGMVAGALISAGTVFVIASSFNNPMYLRLPELDELKNSE-SGGGEV 221
            FT+SLAG QGQI+GG VAG LISAGTV+VIA+SFNNP Y RLP  +E K+S  +G  E 
Sbjct: 168 FFTVSLAGPQGQIIGGFVAGPLISAGTVYVIAASFNNPSYHRLPAEEEQKHSAGTGEREG 227

Query: 222 HSPHVSVAGDSSGHRPGQSRGRGQLVESHGMALMSCH-APSDVVWAPTARQPPP 269
            SP VS  G+ SG   G         ES G+++ SCH   SDV+WAPTAR PPP
Sbjct: 228 QSPPVSGGGEESGQMAGSGG------ESCGVSMYSCHMGGSDVIWAPTARAPPP 275

[Close]

BLAST of Carg08240 vs. ExPASy Swiss-Prot
Match: Q9M9R4 (AT-hook motif nuclear-localized protein 28 OS=Arabidopsis thaliana OX=3702 GN=AHL28 PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.4e-49
Identity = 115/229 (50.22%), Postives = 146/229 (63.76%), Query Frame = 0


Query: 46  IEVVRRPRGRPPGSKNKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTAL 105
           +E V RPRGRP GSKNKPK P+ +T   +P M PY+LEVP GNDVVEA+ RFCR K    
Sbjct: 1   METVGRPRGRPRGSKNKPKAPIFVT--IDPPMSPYILEVPSGNDVVEALNRFCRGKAIGF 60

Query: 106 CVLNGSGTVANVSLHQPS-ATPSATVTFHGCFEILSISATVF----PETMSFPVPNGFTI 165
           CVL+GSG+VA+V+L QPS A P +T+TFHG F++LS+SAT      P ++S PV N FT+
Sbjct: 61  CVLSGSGSVADVTLRQPSPAAPGSTITFHGKFDLLSVSATFLPPLPPTSLSPPVSNFFTV 120

Query: 166 SLAGHQGQIVGGMVAGALISAGTVFVIASSFNNPMYLRLPEL-DELKNSESGGGEVHSPH 225
           SLAG QG+++GG VAG L++AGTV+ +A+SF NP Y RLP   +E +NS  G  E  SP 
Sbjct: 121 SLAGPQGKVIGGFVAGPLVAAGTVYFVATSFKNPSYHRLPATEEEQRNSAEGEEEGQSPP 180

Query: 226 VSVAGDSSGHRPGQSRGRGQLVESHGMALMSCHAPSDVVWAPTARQPPP 269
           VS  G  S +  G                      SDV+W P A+ P P
Sbjct: 181 VSGGGGESMYVGG----------------------SDVIWDPNAKAPSP 205

[Close]

BLAST of Carg08240 vs. ExPASy Swiss-Prot
Match: O23620 (AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AHL23 PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.1e-38
Identity = 90/169 (53.25%), Postives = 112/169 (66.27%), Query Frame = 0


Query: 48  VVRRPRGRPPGSKNKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCV 107
           V RRPRGRPPGSKNKPKPP++ITRE   T+R ++LEV  G DV + +  + R++   +CV
Sbjct: 80  VGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVTNGCDVFDCVATYARRRQRGICV 139

Query: 108 LNGSGTVANVSLHQPSATPSATVTFHGCFEILSISATVFPETMSFPVPNG---FTISLAG 167
           L+GSGTV NVS+ QPSA   A VT  G FEILS+S +  P     P P G    TI LAG
Sbjct: 140 LSGSGTVTNVSIRQPSAA-GAVVTLQGTFEILSLSGSFLPP----PAPPGATSLTIFLAG 199

Query: 168 HQGQIVGGMVAGALISAGTVFVIASSFNNPMYLRLPELDELKNSESGGG 214
            QGQ+VGG V G L +AG V VIA+SF N  Y RLP  ++ +  + GGG
Sbjct: 200 GQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEDEQQQQLGGG 243

[Close]

BLAST of Carg08240 vs. ExPASy Swiss-Prot
Match: O82166 (AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AHL21 PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.2e-37
Identity = 88/169 (52.07%), Postives = 114/169 (67.46%), Query Frame = 0


Query: 48  VVRRPRGRPPGSKNKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCV 107
           V+RRPRGRP GSKNKPKPP+++TRE   T+R ++LEV  G DV E I  + R++   +CV
Sbjct: 76  VMRRPRGRPAGSKNKPKPPVIVTRESANTLRAHILEVGSGCDVFECISTYARRRQRGICV 135

Query: 108 LNGSGTVANVSLHQPSATPSATVTFHGCFEILSISATVFPETMSFPVPNG---FTISLAG 167
           L+G+GTV NVS+ QP+A   A VT  G FEILS+S +  P     P P G    TI LAG
Sbjct: 136 LSGTGTVTNVSIRQPTAA-GAVVTLRGTFEILSLSGSFLPP----PAPPGATSLTIFLAG 195

Query: 168 HQGQIVGGMVAGALISAGTVFVIASSFNNPMYLRLPELDELKNSESGGG 214
            QGQ+VGG V G L++AG V V+A+SF N  Y RLP  +  ++ +SGGG
Sbjct: 196 AQGQVVGGNVVGELMAAGPVMVMAASFTNVAYERLPLDEHEEHLQSGGG 239

[Close]

BLAST of Carg08240 vs. ExPASy Swiss-Prot
Match: O49662 (AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AHL24 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.7e-37
Identity = 95/224 (42.41%), Postives = 134/224 (59.82%), Query Frame = 0


Query: 47  EVVRRPRGRPPGSKNKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALC 106
           ++ RRPRGRP GSKNKPKPP++ITR+    +R +V+E+  G D+VE++  F R++   +C
Sbjct: 102 QMTRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEIGDGCDLVESVATFARRRQRGVC 161

Query: 107 VLNGSGTVANVSLHQPSATPS--ATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAG 166
           V++G+G V NV++ QP + PS  + V+ HG FEILS+S +  P     P   G ++ LAG
Sbjct: 162 VMSGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPPPAP-PTATGLSVYLAG 221

Query: 167 HQGQIVGGMVAGALISAGTVFVIASSFNNPMYLRLP-ELDELK---NSESGGGEVHSP-- 226
            QGQ+VGG V G L+ AG V V+A+SF+N  Y RLP E DE++   +   GGG + SP  
Sbjct: 222 GQGQVVGGSVVGPLLCAGPVVVMAASFSNAAYERLPLEEDEMQTPVHGGGGGGSLESPPM 281

Query: 227 ------HVSVAGDSSGHR--PGQSRGRGQLVESHGMALMSCHAP 255
                 H   A   SGH+  P    G  QL + H  +  S   P
Sbjct: 282 MGQQLQHQQQA--MSGHQGLPPNLLGSVQLQQQHDQSYWSTGRP 322

[Close]

BLAST of Carg08240 vs. ExPASy TrEMBL
Match: A0A6J1HED4 (AT-hook motif nuclear-localized protein 17-like OS=Cucurbita moschata OX=3662 GN=LOC111462724 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 4.7e-149
Identity = 268/271 (98.89%), Postives = 268/271 (98.89%), Query Frame = 0


Query: 1   MLSKFHLSRHFTHPPPHQPEDEPTAAVPLPFKPLPESISAADDSTIEVVRRPRGRPPGSK 60
           MLSKFHLSRHFTHPPPHQPEDEPTAAVPLPFKPLPE ISAADDSTIEVVRRPRGRPPGSK
Sbjct: 1   MLSKFHLSRHFTHPPPHQPEDEPTAAVPLPFKPLPEPISAADDSTIEVVRRPRGRPPGSK 60

Query: 61  NKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCVLNGSGTVANVSLH 120
           NKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCVLNGSGTVANVSL 
Sbjct: 61  NKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCVLNGSGTVANVSLR 120

Query: 121 QPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALIS 180
           QPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALIS
Sbjct: 121 QPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALIS 180

Query: 181 AGTVFVIASSFNNPMYLRLPELDELKNSESGGGEVHSPHVSVAGDSSGHRPGQSRGRGQL 240
           AGTVFVIASSFNNPMYLRLPELDELKNSESGGGEVHSPHVSVAGDSSGHRPGQSRGRGQL
Sbjct: 181 AGTVFVIASSFNNPMYLRLPELDELKNSESGGGEVHSPHVSVAGDSSGHRPGQSRGRGQL 240

Query: 241 VESHGMALMSCHAPSDVVWAPTARQPPPPPY 272
           VES GMALMSCHAPSDVVWAPTARQPPPPPY
Sbjct: 241 VESRGMALMSCHAPSDVVWAPTARQPPPPPY 271

[Close]

BLAST of Carg08240 vs. ExPASy TrEMBL
Match: A0A6J1KDA5 (AT-hook motif nuclear-localized protein 28-like OS=Cucurbita maxima OX=3661 GN=LOC111492200 PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 6.3e-146
Identity = 263/271 (97.05%), Postives = 264/271 (97.42%), Query Frame = 0


Query: 1   MLSKFHLSRHFTHPPPHQPEDEPTAAVPLPFKPLPESISAADDSTIEVVRRPRGRPPGSK 60
           MLSKFHLS HFTHPPPHQPEDEPTAAVPLPFKPLPESISAADDSTIEV+RRPRGRPPGSK
Sbjct: 1   MLSKFHLSHHFTHPPPHQPEDEPTAAVPLPFKPLPESISAADDSTIEVIRRPRGRPPGSK 60

Query: 61  NKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCVLNGSGTVANVSLH 120
           NKPK PLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNT LCVLNGSGTVANVSL 
Sbjct: 61  NKPKLPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTGLCVLNGSGTVANVSLR 120

Query: 121 QPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALIS 180
           QPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALIS
Sbjct: 121 QPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALIS 180

Query: 181 AGTVFVIASSFNNPMYLRLPELDELKNSESGGGEVHSPHVSVAGDSSGHRPGQSRGRGQL 240
           AGTVFVIASSFNNPMYLRLPELDELKNSESG GEVHSPHVSVAGDSSGHRPGQSRG GQL
Sbjct: 181 AGTVFVIASSFNNPMYLRLPELDELKNSESGSGEVHSPHVSVAGDSSGHRPGQSRGSGQL 240

Query: 241 VESHGMALMSCHAPSDVVWAPTARQPPPPPY 272
           VES GMALMSCHAPSDVVWAPTARQPPPPPY
Sbjct: 241 VESRGMALMSCHAPSDVVWAPTARQPPPPPY 271

[Close]

BLAST of Carg08240 vs. ExPASy TrEMBL
Match: A0A5A7VDF8 (AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004190 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.8e-109
Identity = 211/275 (76.73%), Postives = 229/275 (83.27%), Query Frame = 0


Query: 1   MLSKFHLSRH-FT-HPPPHQPEDEPTAAVPLPFKPLPESISAADDSTIEVVRRPRGRPPG 60
           MLSKFHLS H FT HPPP  P DEP AA+P PFK  P+  S AD STIEVVRRPRGRPPG
Sbjct: 15  MLSKFHLSPHPFTHHPPPQPPADEPAAAMPSPFKHHPDLTSTADGSTIEVVRRPRGRPPG 74

Query: 61  SKNKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCVLNGSGTVANVS 120
           SKNKPKPPLV+TREPEP MRPYVLEVPGGNDVVEAI RF R+KN  LCVLNGSGTVANVS
Sbjct: 75  SKNKPKPPLVVTREPEPAMRPYVLEVPGGNDVVEAISRFSRRKNLGLCVLNGSGTVANVS 134

Query: 121 LHQPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGAL 180
           L QPSATP ATVTFHG FEILSISATVFP++   P+PNGFTISLAG QGQIVGG+VAGAL
Sbjct: 135 LRQPSATPGATVTFHGRFEILSISATVFPQSTPLPIPNGFTISLAGPQGQIVGGLVAGAL 194

Query: 181 ISAGTVFVIASSFNNPMYLRLPELDELKN----SESGGGEVHSPHVSVAGDSSGHRPGQS 240
           I+AGTVFV+ASSFNNP+Y RLP+ +E+KN      SGGGEVHSPHVS  GDSSG   G  
Sbjct: 195 IAAGTVFVVASSFNNPLYHRLPDEEEIKNLGSGGGSGGGEVHSPHVSGGGDSSGQ--GHG 254

Query: 241 RGRGQLVESHGMALMSCHAPSDVVWAPTARQPPPP 270
            G GQ+ E+ GMA+ SCHAPSDV+WAPTARQPPPP
Sbjct: 255 HGHGQIAETCGMAMYSCHAPSDVIWAPTARQPPPP 287

[Close]

BLAST of Carg08240 vs. ExPASy TrEMBL
Match: A0A1S3BBI9 (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103488132 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.8e-109
Identity = 211/275 (76.73%), Postives = 229/275 (83.27%), Query Frame = 0


Query: 1   MLSKFHLSRH-FT-HPPPHQPEDEPTAAVPLPFKPLPESISAADDSTIEVVRRPRGRPPG 60
           MLSKFHLS H FT HPPP  P DEP AA+P PFK  P+  S AD STIEVVRRPRGRPPG
Sbjct: 15  MLSKFHLSPHPFTHHPPPQPPADEPAAAMPSPFKHHPDLTSTADGSTIEVVRRPRGRPPG 74

Query: 61  SKNKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCVLNGSGTVANVS 120
           SKNKPKPPLV+TREPEP MRPYVLEVPGGNDVVEAI RF R+KN  LCVLNGSGTVANVS
Sbjct: 75  SKNKPKPPLVVTREPEPAMRPYVLEVPGGNDVVEAISRFSRRKNLGLCVLNGSGTVANVS 134

Query: 121 LHQPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGAL 180
           L QPSATP ATVTFHG FEILSISATVFP++   P+PNGFTISLAG QGQIVGG+VAGAL
Sbjct: 135 LRQPSATPGATVTFHGRFEILSISATVFPQSTPLPIPNGFTISLAGPQGQIVGGLVAGAL 194

Query: 181 ISAGTVFVIASSFNNPMYLRLPELDELKN----SESGGGEVHSPHVSVAGDSSGHRPGQS 240
           I+AGTVFV+ASSFNNP+Y RLP+ +E+KN      SGGGEVHSPHVS  GDSSG   G  
Sbjct: 195 IAAGTVFVVASSFNNPLYHRLPDEEEIKNLGSGGGSGGGEVHSPHVSGGGDSSGQ--GHG 254

Query: 241 RGRGQLVESHGMALMSCHAPSDVVWAPTARQPPPP 270
            G GQ+ E+ GMA+ SCHAPSDV+WAPTARQPPPP
Sbjct: 255 HGHGQIAETCGMAMYSCHAPSDVIWAPTARQPPPP 287

[Close]

BLAST of Carg08240 vs. ExPASy TrEMBL
Match: A0A0A0LLT8 (PPC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G370580 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 4.4e-107
Identity = 209/275 (76.00%), Postives = 227/275 (82.55%), Query Frame = 0


Query: 1   MLSKFHLSRH-FT-HPPPHQPEDEPTAAVPLPFKPLPESISAADDSTIEVVRRPRGRPPG 60
           MLSKFHLS H FT HPPP  P DEP AA+P PFK   +  S AD STIEVVRRPRGRPPG
Sbjct: 15  MLSKFHLSPHPFTHHPPPQPPVDEPIAALPSPFKHHTDLTSTADGSTIEVVRRPRGRPPG 74

Query: 61  SKNKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCVLNGSGTVANVS 120
           SKNKPKPPLV+TREPEP MRPYVLEVPGGNDVVEAI RF R+KN  LCVLNGSGTVANVS
Sbjct: 75  SKNKPKPPLVVTREPEPAMRPYVLEVPGGNDVVEAISRFSRRKNLGLCVLNGSGTVANVS 134

Query: 121 LHQPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGAL 180
           L QPSATP ATVTFHG FEILSISATVFP++   P+PNGF+ISLAG QGQIVGG+VAGAL
Sbjct: 135 LRQPSATPGATVTFHGRFEILSISATVFPQSTPLPLPNGFSISLAGPQGQIVGGLVAGAL 194

Query: 181 ISAGTVFVIASSFNNPMYLRLPELDELKN----SESGGGEVHSPHVSVAGDSSGHRPGQS 240
           I+AGTVFV+ASSFNNP Y RLP+ +E+KN      SGGGEVHSPHVS  GDSS    GQ 
Sbjct: 195 IAAGTVFVVASSFNNPFYHRLPDEEEIKNLGSGGGSGGGEVHSPHVSGGGDSS----GQG 254

Query: 241 RGRGQLVESHGMALMSCHAPSDVVWAPTARQPPPP 270
            G GQ+ E+ GMA+ SCHAPSDV+WAPTARQPPPP
Sbjct: 255 HGHGQIAETCGMAMYSCHAPSDVIWAPTARQPPPP 285

[Close]

BLAST of Carg08240 vs. TAIR 10
Match: AT5G49700.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 260.4 bits (664), Expect = 1.6e-69
Identity = 143/234 (61.11%), Postives = 174/234 (74.36%), Query Frame = 0


Query: 42  DDSTIEVVRRPRGRPPGSKNKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQK 101
           DDS+IEVVRRPRGRPPGSKNKPKPP+ +TR+ +P M PY+LEVP GNDVVEAI RFCR+K
Sbjct: 48  DDSSIEVVRRPRGRPPGSKNKPKPPVFVTRDTDPPMSPYILEVPSGNDVVEAINRFCRRK 107

Query: 102 NTALCVLNGSGTVANVSLHQPS-ATPSATVTFHGCFEILSISATVFP----ETMSFPVPN 161
           +  +CVL+GSG+VANV+L QPS A   +T+TFHG F++LS+SAT  P     ++S PV N
Sbjct: 108 SIGVCVLSGSGSVANVTLRQPSPAALGSTITFHGKFDLLSVSATFLPPPPRTSLSPPVSN 167

Query: 162 GFTISLAGHQGQIVGGMVAGALISAGTVFVIASSFNNPMYLRLPELDELKNSE-SGGGEV 221
            FT+SLAG QGQI+GG VAG LISAGTV+VIA+SFNNP Y RLP  +E K+S  +G  E 
Sbjct: 168 FFTVSLAGPQGQIIGGFVAGPLISAGTVYVIAASFNNPSYHRLPAEEEQKHSAGTGEREG 227

Query: 222 HSPHVSVAGDSSGHRPGQSRGRGQLVESHGMALMSCH-APSDVVWAPTARQPPP 269
            SP VS  G+ SG   G         ES G+++ SCH   SDV+WAPTAR PPP
Sbjct: 228 QSPPVSGGGEESGQMAGSGG------ESCGVSMYSCHMGGSDVIWAPTARAPPP 275

[Close]

BLAST of Carg08240 vs. TAIR 10
Match: AT1G14490.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 198.0 bits (502), Expect = 9.9e-51
Identity = 115/229 (50.22%), Postives = 146/229 (63.76%), Query Frame = 0


Query: 46  IEVVRRPRGRPPGSKNKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTAL 105
           +E V RPRGRP GSKNKPK P+ +T   +P M PY+LEVP GNDVVEA+ RFCR K    
Sbjct: 1   METVGRPRGRPRGSKNKPKAPIFVT--IDPPMSPYILEVPSGNDVVEALNRFCRGKAIGF 60

Query: 106 CVLNGSGTVANVSLHQPS-ATPSATVTFHGCFEILSISATVF----PETMSFPVPNGFTI 165
           CVL+GSG+VA+V+L QPS A P +T+TFHG F++LS+SAT      P ++S PV N FT+
Sbjct: 61  CVLSGSGSVADVTLRQPSPAAPGSTITFHGKFDLLSVSATFLPPLPPTSLSPPVSNFFTV 120

Query: 166 SLAGHQGQIVGGMVAGALISAGTVFVIASSFNNPMYLRLPEL-DELKNSESGGGEVHSPH 225
           SLAG QG+++GG VAG L++AGTV+ +A+SF NP Y RLP   +E +NS  G  E  SP 
Sbjct: 121 SLAGPQGKVIGGFVAGPLVAAGTVYFVATSFKNPSYHRLPATEEEQRNSAEGEEEGQSPP 180

Query: 226 VSVAGDSSGHRPGQSRGRGQLVESHGMALMSCHAPSDVVWAPTARQPPP 269
           VS  G  S +  G                      SDV+W P A+ P P
Sbjct: 181 VSGGGGESMYVGG----------------------SDVIWDPNAKAPSP 205

[Close]

BLAST of Carg08240 vs. TAIR 10
Match: AT4G17800.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 161.8 bits (408), Expect = 7.9e-40
Identity = 90/169 (53.25%), Postives = 112/169 (66.27%), Query Frame = 0


Query: 48  VVRRPRGRPPGSKNKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCV 107
           V RRPRGRPPGSKNKPKPP++ITRE   T+R ++LEV  G DV + +  + R++   +CV
Sbjct: 80  VGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVTNGCDVFDCVATYARRRQRGICV 139

Query: 108 LNGSGTVANVSLHQPSATPSATVTFHGCFEILSISATVFPETMSFPVPNG---FTISLAG 167
           L+GSGTV NVS+ QPSA   A VT  G FEILS+S +  P     P P G    TI LAG
Sbjct: 140 LSGSGTVTNVSIRQPSAA-GAVVTLQGTFEILSLSGSFLPP----PAPPGATSLTIFLAG 199

Query: 168 HQGQIVGGMVAGALISAGTVFVIASSFNNPMYLRLPELDELKNSESGGG 214
            QGQ+VGG V G L +AG V VIA+SF N  Y RLP  ++ +  + GGG
Sbjct: 200 GQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEDEQQQQLGGG 243

[Close]

BLAST of Carg08240 vs. TAIR 10
Match: AT2G35270.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 158.3 bits (399), Expect = 8.7e-39
Identity = 88/169 (52.07%), Postives = 114/169 (67.46%), Query Frame = 0


Query: 48  VVRRPRGRPPGSKNKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCV 107
           V+RRPRGRP GSKNKPKPP+++TRE   T+R ++LEV  G DV E I  + R++   +CV
Sbjct: 76  VMRRPRGRPAGSKNKPKPPVIVTRESANTLRAHILEVGSGCDVFECISTYARRRQRGICV 135

Query: 108 LNGSGTVANVSLHQPSATPSATVTFHGCFEILSISATVFPETMSFPVPNG---FTISLAG 167
           L+G+GTV NVS+ QP+A   A VT  G FEILS+S +  P     P P G    TI LAG
Sbjct: 136 LSGTGTVTNVSIRQPTAA-GAVVTLRGTFEILSLSGSFLPP----PAPPGATSLTIFLAG 195

Query: 168 HQGQIVGGMVAGALISAGTVFVIASSFNNPMYLRLPELDELKNSESGGG 214
            QGQ+VGG V G L++AG V V+A+SF N  Y RLP  +  ++ +SGGG
Sbjct: 196 AQGQVVGGNVVGELMAAGPVMVMAASFTNVAYERLPLDEHEEHLQSGGG 239

[Close]

BLAST of Carg08240 vs. TAIR 10
Match: AT4G22810.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 157.1 bits (396), Expect = 1.9e-38
Identity = 95/224 (42.41%), Postives = 134/224 (59.82%), Query Frame = 0


Query: 47  EVVRRPRGRPPGSKNKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALC 106
           ++ RRPRGRP GSKNKPKPP++ITR+    +R +V+E+  G D+VE++  F R++   +C
Sbjct: 102 QMTRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEIGDGCDLVESVATFARRRQRGVC 161

Query: 107 VLNGSGTVANVSLHQPSATPS--ATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAG 166
           V++G+G V NV++ QP + PS  + V+ HG FEILS+S +  P     P   G ++ LAG
Sbjct: 162 VMSGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPPPAP-PTATGLSVYLAG 221

Query: 167 HQGQIVGGMVAGALISAGTVFVIASSFNNPMYLRLP-ELDELK---NSESGGGEVHSP-- 226
            QGQ+VGG V G L+ AG V V+A+SF+N  Y RLP E DE++   +   GGG + SP  
Sbjct: 222 GQGQVVGGSVVGPLLCAGPVVVMAASFSNAAYERLPLEEDEMQTPVHGGGGGGSLESPPM 281

Query: 227 ------HVSVAGDSSGHR--PGQSRGRGQLVESHGMALMSCHAP 255
                 H   A   SGH+  P    G  QL + H  +  S   P
Sbjct: 282 MGQQLQHQQQA--MSGHQGLPPNLLGSVQLQQQHDQSYWSTGRP 322

The following BLAST results are available for this feature:

BLAST of Carg08240 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029679.1	3.6e-151	100.00	AT-hook motif nuclear-localized protein 17, partial [Cucurbita argyrosperma subs...	[more]
XP_022962200.1	9.7e-149	98.89	AT-hook motif nuclear-localized protein 17-like [Cucurbita moschata]	[more]
XP_023546815.1	4.5e-146	97.42	AT-hook motif nuclear-localized protein 17-like [Cucurbita pepo subsp. pepo]	[more]
KAG6598735.1	5.9e-146	99.62	AT-hook motif nuclear-localized protein 17, partial [Cucurbita argyrosperma subs...	[more]
XP_022997238.1	1.3e-145	97.05	AT-hook motif nuclear-localized protein 28-like [Cucurbita maxima]	[more]

BLAST of Carg08240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTA2	2.3e-68	61.11	AT-hook motif nuclear-localized protein 17 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q9M9R4	1.4e-49	50.22	AT-hook motif nuclear-localized protein 28 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O23620	1.1e-38	53.25	AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O82166	1.2e-37	52.07	AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O49662	2.7e-37	42.41	AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]

BLAST of Carg08240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HED4	4.7e-149	98.89	AT-hook motif nuclear-localized protein 17-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KDA5	6.3e-146	97.05	AT-hook motif nuclear-localized protein 28-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7VDF8	2.8e-109	76.73	AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BBI9	2.8e-109	76.73	AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103488132 ...	[more]
A0A0A0LLT8	4.4e-107	76.00	PPC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G370580 PE=4 SV...	[more]

BLAST of Carg08240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49700.1	1.6e-69	61.11	Predicted AT-hook DNA-binding family protein	[more]
AT1G14490.1	9.9e-51	50.22	Predicted AT-hook DNA-binding family protein	[more]
AT4G17800.1	7.9e-40	53.25	Predicted AT-hook DNA-binding family protein	[more]
AT2G35270.1	8.7e-39	52.07	Predicted AT-hook DNA-binding family protein	[more]
AT4G22810.1	1.9e-38	42.41	Predicted AT-hook DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005175	PPC domain	PFAM	PF03479	PCC	coord: 78..193 e-value: 2.5E-26 score: 92.2
IPR005175	PPC domain	PROSITE	PS51742	PPC	coord: 74..218 score: 32.863056
IPR005175	PPC domain	CDD	cd11378	DUF296	coord: 78..191 e-value: 2.54869E-26 score: 97.6561
None	No IPR available	GENE3D	3.30.1330.80		coord: 77..225 e-value: 5.2E-22 score: 80.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..240
None	No IPR available	PANTHER	PTHR31100:SF69	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED	coord: 35..270
None	No IPR available	SUPERFAMILY	117856	AF0104/ALDC/Ptd012-like	coord: 76..200
IPR014476	AT-hook motif nuclear-localized protein 15-29	PANTHER	PTHR31100	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15	coord: 35..270

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08240-RA	Carg08240-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003680	minor groove of adenine-thymine-rich DNA binding