Carg08238 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg08238
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription factor bHLH30-like
LocationCarg_Chr05: 2869149 .. 2870008 (+)
RNA-Seq ExpressionCarg08238
SyntenyCarg08238
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCCTTTTCAGAGTCATTACGGATTCCAGAGCAGTTGGTTGAATTATCGCGACGGCGATCATTTTAAACGTTCGATGTCCGCTGCCGGATGCTCGATCGTCGGAAATGCTGCAGATTCGTCCAAGGACGAGAAGAAATCTACGGAAGCGAGTCGAAGTCATAAGGAAGCGGAGAGGAGACGGCGACAGAGAATCAATTCGCATTTATCTACGCTCCGTACGATTCTTCCTAATACTACTAAGGTAATCGTTTAATTCGCGAAATTGTTGTGTGCATTTTGTTTTGTTGATGTTGAATTGACGAAGTGTTGAGGTTTTTGGATATGGCGGATGGAATATTTGAATTAGTTTTGGACTGTTTGTTTGTTTTATTGTAGACGGACAAGGCGTCGCTACTGGCGGAAGTGGTGAGTCATGTGAAGGAGTTGAGACGGCGAGCGACGGAGGTTGCGTACCAAAGTGCAGACCAGTGCGACGGCGACGGCGGTAAAGTGCCGTGGGCGTTCCCTAGCGAGGAAGACGAAGCGACGCTCTGTTACTGCGATAACGAAAACAGGTTAATGAGAGCGACAGTTTGTTGCGATGAGCGGTCCGGTCTGAATCGGGATTTGATTCAAGCTATCCGGTCGGTTCACGCGAGGGTGGTTCGGGCCGAGATGATGACGTTGGGCGGGCGGACGAAGAACGTGGTGGTGTTGGAGTGGAGCGGTGGCGGCGACGGTGGCGGGAGAGAGGAGGCGTTCGTGGGCCTGAGGCGGGCTTTAAAGGCCGTAGTGGAGAATCAGGCCCAGAATCTATCGGGTCATAAGCGGGCTAGGGCCTGTTGTCCAATAGAGGACCCGTTTTACATGTGCTGA

mRNA sequence

ATGCTTCCTTTTCAGAGTCATTACGGATTCCAGAGCAGTTGGTTGAATTATCGCGACGGCGATCATTTTAAACGTTCGATGTCCGCTGCCGGATGCTCGATCGTCGGAAATGCTGCAGATTCGTCCAAGGACGAGAAGAAATCTACGGAAGCGAGTCGAAGTCATAAGGAAGCGGAGAGGAGACGGCGACAGAGAATCAATTCGCATTTATCTACGCTCCGTACGATTCTTCCTAATACTACTAAGACGGACAAGGCGTCGCTACTGGCGGAAGTGGTGAGTCATGTGAAGGAGTTGAGACGGCGAGCGACGGAGGTTGCGTACCAAAGTGCAGACCAGTGCGACGGCGACGGCGGTAAAGTGCCGTGGGCGTTCCCTAGCGAGGAAGACGAAGCGACGCTCTGTTACTGCGATAACGAAAACAGGTTAATGAGAGCGACAGTTTGTTGCGATGAGCGGTCCGGTCTGAATCGGGATTTGATTCAAGCTATCCGGTCGGTTCACGCGAGGGTGGTTCGGGCCGAGATGATGACGTTGGGCGGGCGGACGAAGAACGTGGTGGTGTTGGAGTGGAGCGGTGGCGGCGACGGTGGCGGGAGAGAGGAGGCGTTCGTGGGCCTGAGGCGGGCTTTAAAGGCCGTAGTGGAGAATCAGGCCCAGAATCTATCGGGTCATAAGCGGGCTAGGGCCTGTTGTCCAATAGAGGACCCGTTTTACATGTGCTGA

Coding sequence (CDS)

ATGCTTCCTTTTCAGAGTCATTACGGATTCCAGAGCAGTTGGTTGAATTATCGCGACGGCGATCATTTTAAACGTTCGATGTCCGCTGCCGGATGCTCGATCGTCGGAAATGCTGCAGATTCGTCCAAGGACGAGAAGAAATCTACGGAAGCGAGTCGAAGTCATAAGGAAGCGGAGAGGAGACGGCGACAGAGAATCAATTCGCATTTATCTACGCTCCGTACGATTCTTCCTAATACTACTAAGACGGACAAGGCGTCGCTACTGGCGGAAGTGGTGAGTCATGTGAAGGAGTTGAGACGGCGAGCGACGGAGGTTGCGTACCAAAGTGCAGACCAGTGCGACGGCGACGGCGGTAAAGTGCCGTGGGCGTTCCCTAGCGAGGAAGACGAAGCGACGCTCTGTTACTGCGATAACGAAAACAGGTTAATGAGAGCGACAGTTTGTTGCGATGAGCGGTCCGGTCTGAATCGGGATTTGATTCAAGCTATCCGGTCGGTTCACGCGAGGGTGGTTCGGGCCGAGATGATGACGTTGGGCGGGCGGACGAAGAACGTGGTGGTGTTGGAGTGGAGCGGTGGCGGCGACGGTGGCGGGAGAGAGGAGGCGTTCGTGGGCCTGAGGCGGGCTTTAAAGGCCGTAGTGGAGAATCAGGCCCAGAATCTATCGGGTCATAAGCGGGCTAGGGCCTGTTGTCCAATAGAGGACCCGTTTTACATGTGCTGA

Protein sequence

MLPFQSHYGFQSSWLNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAERRRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRATEVAYQSADQCDGDGGKVPWAFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEMMTLGGRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQAQNLSGHKRARACCPIEDPFYMC
Homology
[Close]
BLAST of Carg08238 vs. NCBI nr
Match: KAG7029677.1 (Transcription factor AIG1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 481.1 bits (1237), Expect = 5.6e-132
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0 

Query: 1   MLPFQSHYGFQSSWLNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAER 60
           MLPFQSHYGFQSSWLNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAER
Sbjct: 1   MLPFQSHYGFQSSWLNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAER 60

Query: 61  RRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRATEVAYQSADQCDGDGGK 120
           RRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRATEVAYQSADQCDGDGGK
Sbjct: 61  RRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRATEVAYQSADQCDGDGGK 120

Query: 121 VPWAFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEMMTLG 180
           VPWAFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEMMTLG
Sbjct: 121 VPWAFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEMMTLG 180

Query: 181 GRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQAQNLSGHKRARACCPIEDPFYM 240
           GRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQAQNLSGHKRARACCPIEDPFYM
Sbjct: 181 GRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQAQNLSGHKRARACCPIEDPFYM 240

Query: 241 C 242
           C
Sbjct: 241 C 241

[Close]
BLAST of Carg08238 vs. NCBI nr
Match: XP_022962219.1 (transcription factor bHLH30-like [Cucurbita moschata])

HSP 1 Score: 477.6 bits (1228), Expect = 6.2e-131
Identity = 239/241 (99.17%), Postives = 241/241 (100.00%), Query Frame = 0 

Query: 1   MLPFQSHYGFQSSWLNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAER 60
           MLPFQSHYGFQSSWLNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAER
Sbjct: 1   MLPFQSHYGFQSSWLNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAER 60

Query: 61  RRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRATEVAYQSADQCDGDGGK 120
           RRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRATEVA++SADQCDGDGGK
Sbjct: 61  RRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRATEVAHRSADQCDGDGGK 120

Query: 121 VPWAFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEMMTLG 180
           VPWAFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEMMTLG
Sbjct: 121 VPWAFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEMMTLG 180

Query: 181 GRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQAQNLSGHKRARACCPIEDPFYM 240
           GRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQAQNLSGHKRARACCPIEDPFYM
Sbjct: 181 GRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQAQNLSGHKRARACCPIEDPFYM 240

Query: 241 C 242
           C
Sbjct: 241 C 241

[Close]
BLAST of Carg08238 vs. NCBI nr
Match: KAG6598734.1 (Transcription factor AIG1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 474.6 bits (1220), Expect = 5.2e-130
Identity = 238/241 (98.76%), Postives = 240/241 (99.59%), Query Frame = 0 

Query: 1   MLPFQSHYGFQSSWLNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAER 60
           MLPFQS YGFQSSWLNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAER
Sbjct: 1   MLPFQSRYGFQSSWLNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAER 60

Query: 61  RRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRATEVAYQSADQCDGDGGK 120
           RRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRATEVA++SADQCDGDGGK
Sbjct: 61  RRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRATEVAHRSADQCDGDGGK 120

Query: 121 VPWAFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEMMTLG 180
           VPWAFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEMMTLG
Sbjct: 121 VPWAFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEMMTLG 180

Query: 181 GRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQAQNLSGHKRARACCPIEDPFYM 240
           GRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQAQNLSGHKRARACCPIEDPFYM
Sbjct: 181 GRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQAQNLSGHKRARACCPIEDPFYM 240

Query: 241 C 242
           C
Sbjct: 241 C 241

[Close]
BLAST of Carg08238 vs. NCBI nr
Match: XP_023546949.1 (transcription factor bHLH30-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 467.6 bits (1202), Expect = 6.4e-128
Identity = 234/241 (97.10%), Postives = 238/241 (98.76%), Query Frame = 0 

Query: 1   MLPFQSHYGFQSSWLNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAER 60
           MLPFQSHY FQSSWL+YRDGDHFKRSMS AGCSIVGNAADSSKDEKKSTEASRSHKEAER
Sbjct: 1   MLPFQSHYEFQSSWLSYRDGDHFKRSMSTAGCSIVGNAADSSKDEKKSTEASRSHKEAER 60

Query: 61  RRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRATEVAYQSADQCDGDGGK 120
           RRRQRINSHLSTLRT+LPNTTKTDKASLLAEVVSHVKELRRRATEVA++SADQCDGDGGK
Sbjct: 61  RRRQRINSHLSTLRTLLPNTTKTDKASLLAEVVSHVKELRRRATEVAHRSADQCDGDGGK 120

Query: 121 VPWAFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEMMTLG 180
           VPWAFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEMMTLG
Sbjct: 121 VPWAFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEMMTLG 180

Query: 181 GRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQAQNLSGHKRARACCPIEDPFYM 240
           GRTKNVVVLEWS GGDGGGREEAFVGLRRALKAVVENQAQNLSGHKRARACCPIEDPFYM
Sbjct: 181 GRTKNVVVLEWSDGGDGGGREEAFVGLRRALKAVVENQAQNLSGHKRARACCPIEDPFYM 240

Query: 241 C 242
           C
Sbjct: 241 C 241

[Close]
BLAST of Carg08238 vs. NCBI nr
Match: XP_022997251.1 (transcription factor bHLH30-like [Cucurbita maxima])

HSP 1 Score: 447.6 bits (1150), Expect = 6.9e-122
Identity = 230/245 (93.88%), Postives = 235/245 (95.92%), Query Frame = 0 

Query: 1   MLPFQSHYGFQSSWLNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAER 60
           MLPFQSHYGFQSSWLNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAER
Sbjct: 1   MLPFQSHYGFQSSWLNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAER 60

Query: 61  RRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRATEVAYQSADQCD----G 120
           RRRQRINSHLSTLRT+LPNTTKTDKASLLAEVVSHVKELRRRATEVA +SADQCD    G
Sbjct: 61  RRRQRINSHLSTLRTLLPNTTKTDKASLLAEVVSHVKELRRRATEVARRSADQCDGEGEG 120

Query: 121 DGGKVPWAFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEM 180
           +GG VPW FPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEM
Sbjct: 121 EGGIVPWPFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEM 180

Query: 181 MTLGGRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQAQNLSGHKRARACCPIED 240
           MTLGGRTKNVVVLEWSGG  GGGREEAF+GLRRALKAVVENQAQNLSG KRARACCPIED
Sbjct: 181 MTLGGRTKNVVVLEWSGG--GGGREEAFLGLRRALKAVVENQAQNLSGQKRARACCPIED 240

Query: 241 PFYMC 242
           PF+MC
Sbjct: 241 PFFMC 243

[Close]
BLAST of Carg08238 vs. ExPASy Swiss-Prot
Match: Q9S7Y1 (Transcription factor bHLH30 OS=Arabidopsis thaliana OX=3702 GN=BHLH30 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.7e-28
Identity = 74/178 (41.57%), Postives = 114/178 (64.04%), Query Frame = 0 

Query: 45  EKKSTEASRSHKEAERRRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRAT 104
           + K+  AS+SH EAERRRR+RIN+HL+ LR+ILPNTTKTDKASLLAEV+ HVKEL+R  +
Sbjct: 168 DAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETS 227

Query: 105 EVAYQSADQCDGDGGKVPWAFPSEEDEATLCYCDNENR-----LMRATVCCDERSGLNRD 164
            ++  +               P+E DE T+ + + E       +++A++CC++RS L  D
Sbjct: 228 VISETN-------------LVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPD 287

Query: 165 LIQAIRSVHARVVRAEMMTLGGRTKNVVVLEWSGGGDGGGREEAFVG-LRRALKAVVE 217
           +I+ ++++  + ++AE+ T+GGR KNV+ +           EE  +G +  ALKAV+E
Sbjct: 288 MIKTLKAMRLKTLKAEITTVGGRVKNVLFVTGEESSGEEVEEEYCIGTIEEALKAVME 332

[Close]
BLAST of Carg08238 vs. ExPASy Swiss-Prot
Match: Q9LS08 (Transcription factor AIG1 OS=Arabidopsis thaliana OX=3702 GN=BHLH32 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 8.7e-27
Identity = 82/211 (38.86%), Postives = 118/211 (55.92%), Query Frame = 0 

Query: 34  IVGNAADSSKDEKKSTEASRSHKEAERRRRQRINSHLSTLRTILPNTTKTDKASLLAEVV 93
           I+G  +     + K+  AS+SH EAERRRR+RIN+HL+ LR+ILPNTTKTDKASLLAEV+
Sbjct: 115 IMGKLSAQEVMDAKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVI 174

Query: 94  SHVKELRRRATEV--AYQSADQCDGDGGKVPWAFPSEEDEATLCYCDNE-NRLMRATVCC 153
            H+KEL+R+ +++   YQ   +CD             +      Y D E N ++RA+ CC
Sbjct: 175 QHMKELKRQTSQITDTYQVPTECD-------------DLTVDSSYNDEEGNLVIRASFCC 234

Query: 154 DERSGLNRDLIQAIRSVHARVVRAEMMTLGGRTKNVVVL--EWSGGGDGGGREEAFVG-- 213
            +R+ L  D+I A++S+  R ++AE+ T+GGR KN++ L  E+    D       F G  
Sbjct: 235 QDRTDLMHDVINALKSLRLRTLKAEIATVGGRVKNILFLSREYDDEEDHDSYRRNFDGDD 294

Query: 214 ----------------LRRALKAVVENQAQN 222
                           +  ALKAV+E    N
Sbjct: 295 VEDYDEERMMNNRVSSIEEALKAVIEKCVHN 312

[Close]
BLAST of Carg08238 vs. ExPASy Swiss-Prot
Match: O80674 (Transcription factor bHLH106 OS=Arabidopsis thaliana OX=3702 GN=BHLH106 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-23
Identity = 70/182 (38.46%), Postives = 119/182 (65.38%), Query Frame = 0 

Query: 45  EKKSTEASRSHKEAERRRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRAT 104
           + ++  A R+HKEAERRRR+RINSHL+ LR +L   +KTDKA+LLA+VV  V+EL+++  
Sbjct: 61  QDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQTL 120

Query: 105 EVAYQSADQCDGDGGKVPWAFPSEEDEATLC----YCDNENRLMRATVCCDERSGLNRDL 164
           E +   +DQ            PSE DE ++     Y ++ + + +A++CC++RS L  DL
Sbjct: 121 ETS--DSDQT---------LLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDL 180

Query: 165 IQAIRSVHARVVRAEMMTLGGRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQAQ 223
           ++ ++S++ + +RAEM+T+GGRT++V+V+       G    E+   L+ ALK+++E  ++
Sbjct: 181 MEILKSLNMKTLRAEMVTIGGRTRSVLVVAADKEMHG---VESVHFLQNALKSLLERSSK 228

[Close]
BLAST of Carg08238 vs. ExPASy Swiss-Prot
Match: P0CB25 (Transcription factor bHLH131 OS=Arabidopsis thaliana OX=3702 GN=BHLH131 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-22
Identity = 68/180 (37.78%), Postives = 101/180 (56.11%), Query Frame = 0 

Query: 42  SKDEKKSTEASRSHKEAERRRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRR 101
           SK E K   A++ H +AERRRR RINS  +TLRTILPN  K DKAS+L E V +  EL++
Sbjct: 84  SKTESKEV-AAKKHSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKK 143

Query: 102 RATEVAYQSADQCDGDGGKVPWAFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLI 161
              ++                   PS ED   L +C+N   L R    C +R GL  ++ 
Sbjct: 144 MVQDIP----------------TTPSLEDNLRLDHCNNNRDLARVVFSCSDREGLMSEVA 203

Query: 162 QAIRSVHARVVRAEMMTLGGRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQAQN 221
           +++++V A+ VRAE+MT+GGRTK  + ++   G +G       V L+++LK VV  ++ +
Sbjct: 204 ESMKAVKAKAVRAEIMTVGGRTKCALFVQGVNGNEG------LVKLKKSLKLVVNGKSSS 240

[Close]
BLAST of Carg08238 vs. ExPASy Swiss-Prot
Match: Q9LET0 (Putative transcription factor bHLH107 OS=Arabidopsis thaliana OX=3702 GN=BHLH107 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.6e-20
Identity = 65/188 (34.57%), Postives = 113/188 (60.11%), Query Frame = 0 

Query: 45  EKKSTEASRSHKEAERRRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRAT 104
           E K+  + R+HKEAER+RR RINSHL+ LR +L   +KTDK++LLA+VV  VKEL+++  
Sbjct: 39  EDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQTL 98

Query: 105 EVAYQSADQCDGDGGKVPWAFPSEEDEATLCYCDNENR------LMRATVCCDERSGLNR 164
           E+  ++               PSE DE ++   ++ +R      + + + CC++R  L +
Sbjct: 99  EITDET--------------IPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELLK 158

Query: 165 DLIQAIRSVHARVVRAEMMTLGGRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQ 224
           DL++ ++S+    + A+M T+GGRT+NV+V+       G    ++   L+ ALK+++E  
Sbjct: 159 DLMETLKSLQMETLFADMTTVGGRTRNVLVVAADKEHHG---VQSVNFLQNALKSLLERS 209

Query: 225 AQN-LSGH 226
           +++ + GH
Sbjct: 219 SKSVMVGH 209

[Close]
BLAST of Carg08238 vs. ExPASy TrEMBL
Match: A0A6J1HGG0 (transcription factor bHLH30-like OS=Cucurbita moschata OX=3662 GN=LOC111462735 PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 3.0e-131
Identity = 239/241 (99.17%), Postives = 241/241 (100.00%), Query Frame = 0 

Query: 1   MLPFQSHYGFQSSWLNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAER 60
           MLPFQSHYGFQSSWLNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAER
Sbjct: 1   MLPFQSHYGFQSSWLNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAER 60

Query: 61  RRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRATEVAYQSADQCDGDGGK 120
           RRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRATEVA++SADQCDGDGGK
Sbjct: 61  RRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRATEVAHRSADQCDGDGGK 120

Query: 121 VPWAFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEMMTLG 180
           VPWAFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEMMTLG
Sbjct: 121 VPWAFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEMMTLG 180

Query: 181 GRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQAQNLSGHKRARACCPIEDPFYM 240
           GRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQAQNLSGHKRARACCPIEDPFYM
Sbjct: 181 GRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQAQNLSGHKRARACCPIEDPFYM 240

Query: 241 C 242
           C
Sbjct: 241 C 241

[Close]
BLAST of Carg08238 vs. ExPASy TrEMBL
Match: A0A6J1K703 (transcription factor bHLH30-like OS=Cucurbita maxima OX=3661 GN=LOC111492211 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 3.3e-122
Identity = 230/245 (93.88%), Postives = 235/245 (95.92%), Query Frame = 0 

Query: 1   MLPFQSHYGFQSSWLNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAER 60
           MLPFQSHYGFQSSWLNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAER
Sbjct: 1   MLPFQSHYGFQSSWLNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAER 60

Query: 61  RRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRATEVAYQSADQCD----G 120
           RRRQRINSHLSTLRT+LPNTTKTDKASLLAEVVSHVKELRRRATEVA +SADQCD    G
Sbjct: 61  RRRQRINSHLSTLRTLLPNTTKTDKASLLAEVVSHVKELRRRATEVARRSADQCDGEGEG 120

Query: 121 DGGKVPWAFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEM 180
           +GG VPW FPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEM
Sbjct: 121 EGGIVPWPFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEM 180

Query: 181 MTLGGRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQAQNLSGHKRARACCPIED 240
           MTLGGRTKNVVVLEWSGG  GGGREEAF+GLRRALKAVVENQAQNLSG KRARACCPIED
Sbjct: 181 MTLGGRTKNVVVLEWSGG--GGGREEAFLGLRRALKAVVENQAQNLSGQKRARACCPIED 240

Query: 241 PFYMC 242
           PF+MC
Sbjct: 241 PFFMC 243

[Close]
BLAST of Carg08238 vs. ExPASy TrEMBL
Match: A0A0A0LPM7 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G370560 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 5.2e-99
Identity = 194/242 (80.17%), Postives = 214/242 (88.43%), Query Frame = 0 

Query: 1   MLPFQSHYGFQSSW-LNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAE 60
           MLPFQ+HYGFQSSW L+Y + D+ K SMS AGCSIV NAAD+SKD KKS+EASRSHKEAE
Sbjct: 1   MLPFQTHYGFQSSWSLSYHNADNLKPSMSTAGCSIVDNAADASKDVKKSSEASRSHKEAE 60

Query: 61  RRRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRATEVAYQSADQCDGDGG 120
           RRRRQRINSHLSTLRT+LPNTTKTDKASLLAEVVSHVKELRRRATEVA +S +Q  G GG
Sbjct: 61  RRRRQRINSHLSTLRTLLPNTTKTDKASLLAEVVSHVKELRRRATEVARRSTEQ-SGGGG 120

Query: 121 KVPWAFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEMMTL 180
            V W FPSEEDEATLCYCDNEN++MRATVCCDERS LNRD++QAIRSV  RVVRAE MTL
Sbjct: 121 MVSWPFPSEEDEATLCYCDNENKVMRATVCCDERSSLNRDMMQAIRSVEVRVVRAETMTL 180

Query: 181 GGRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQAQNLSGHKRARACCPIEDPFY 240
           GGRTKNVVV+EWSGG  G  R+E F+GLRRALKAVVEN+AQ++ G+KRARACCPIED F 
Sbjct: 181 GGRTKNVVVMEWSGG--GRQRDEEFMGLRRALKAVVENRAQSVLGNKRARACCPIEDTFL 239

Query: 241 MC 242
           MC
Sbjct: 241 MC 239

[Close]
BLAST of Carg08238 vs. ExPASy TrEMBL
Match: A0A5A7VHZ1 (Transcription factor bHLH30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004210 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.5e-98
Identity = 192/241 (79.67%), Postives = 210/241 (87.14%), Query Frame = 0 

Query: 1   MLPFQSHYGFQSSWLNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAER 60
           MLPFQ+HYGFQSSWL+Y + DH K SMS AGCSIV NAADS KDEKKSTEASRSHKEAER
Sbjct: 1   MLPFQTHYGFQSSWLSYHNVDHLKPSMSTAGCSIVDNAADSPKDEKKSTEASRSHKEAER 60

Query: 61  RRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRATEVAYQSADQCDGDGGK 120
           RRRQRINSHL+T RT+LPNTTKTDKASLLAEVVS VKELRRRATEVA +S +Q  G G  
Sbjct: 61  RRRQRINSHLATFRTLLPNTTKTDKASLLAEVVSQVKELRRRATEVARRSTEQ-SGGGEM 120

Query: 121 VPWAFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEMMTLG 180
           V W FPSEEDEATLCYCDNEN++MRATVCCDERS LNRD++QAIRSV  RVVRAE MTLG
Sbjct: 121 VSWPFPSEEDEATLCYCDNENKVMRATVCCDERSSLNRDMMQAIRSVQVRVVRAETMTLG 180

Query: 181 GRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQAQNLSGHKRARACCPIEDPFYM 240
           GRTKNVVV+EWSGG  G  REE F+GLRRALKAVVEN+AQ++ G+KRARACCP+ED   M
Sbjct: 181 GRTKNVVVMEWSGG--GREREEEFMGLRRALKAVVENRAQSVLGNKRARACCPMEDTILM 238

Query: 241 C 242
           C
Sbjct: 241 C 238

[Close]
BLAST of Carg08238 vs. ExPASy TrEMBL
Match: A0A1S3BBI7 (transcription factor bHLH30-like OS=Cucumis melo OX=3656 GN=LOC103488129 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.5e-98
Identity = 192/241 (79.67%), Postives = 210/241 (87.14%), Query Frame = 0 

Query: 1   MLPFQSHYGFQSSWLNYRDGDHFKRSMSAAGCSIVGNAADSSKDEKKSTEASRSHKEAER 60
           MLPFQ+HYGFQSSWL+Y + DH K SMS AGCSIV NAADS KDEKKSTEASRSHKEAER
Sbjct: 1   MLPFQTHYGFQSSWLSYHNVDHLKPSMSTAGCSIVDNAADSPKDEKKSTEASRSHKEAER 60

Query: 61  RRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRATEVAYQSADQCDGDGGK 120
           RRRQRINSHL+T RT+LPNTTKTDKASLLAEVVS VKELRRRATEVA +S +Q  G G  
Sbjct: 61  RRRQRINSHLATFRTLLPNTTKTDKASLLAEVVSQVKELRRRATEVARRSTEQ-SGGGEM 120

Query: 121 VPWAFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLIQAIRSVHARVVRAEMMTLG 180
           V W FPSEEDEATLCYCDNEN++MRATVCCDERS LNRD++QAIRSV  RVVRAE MTLG
Sbjct: 121 VSWPFPSEEDEATLCYCDNENKVMRATVCCDERSSLNRDMMQAIRSVQVRVVRAETMTLG 180

Query: 181 GRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQAQNLSGHKRARACCPIEDPFYM 240
           GRTKNVVV+EWSGG  G  REE F+GLRRALKAVVEN+AQ++ G+KRARACCP+ED   M
Sbjct: 181 GRTKNVVVMEWSGG--GREREEEFMGLRRALKAVVENRAQSVLGNKRARACCPMEDTILM 238

Query: 241 C 242
           C
Sbjct: 241 C 238

[Close]
BLAST of Carg08238 vs. TAIR 10
Match: AT1G68810.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 127.1 bits (318), Expect = 1.9e-29
Identity = 74/178 (41.57%), Postives = 114/178 (64.04%), Query Frame = 0 

Query: 45  EKKSTEASRSHKEAERRRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRAT 104
           + K+  AS+SH EAERRRR+RIN+HL+ LR+ILPNTTKTDKASLLAEV+ HVKEL+R  +
Sbjct: 168 DAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETS 227

Query: 105 EVAYQSADQCDGDGGKVPWAFPSEEDEATLCYCDNENR-----LMRATVCCDERSGLNRD 164
            ++  +               P+E DE T+ + + E       +++A++CC++RS L  D
Sbjct: 228 VISETN-------------LVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPD 287

Query: 165 LIQAIRSVHARVVRAEMMTLGGRTKNVVVLEWSGGGDGGGREEAFVG-LRRALKAVVE 217
           +I+ ++++  + ++AE+ T+GGR KNV+ +           EE  +G +  ALKAV+E
Sbjct: 288 MIKTLKAMRLKTLKAEITTVGGRVKNVLFVTGEESSGEEVEEEYCIGTIEEALKAVME 332

[Close]
BLAST of Carg08238 vs. TAIR 10
Match: AT3G25710.1 (basic helix-loop-helix 32 )

HSP 1 Score: 122.1 bits (305), Expect = 6.2e-28
Identity = 82/211 (38.86%), Postives = 118/211 (55.92%), Query Frame = 0 

Query: 34  IVGNAADSSKDEKKSTEASRSHKEAERRRRQRINSHLSTLRTILPNTTKTDKASLLAEVV 93
           I+G  +     + K+  AS+SH EAERRRR+RIN+HL+ LR+ILPNTTKTDKASLLAEV+
Sbjct: 115 IMGKLSAQEVMDAKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVI 174

Query: 94  SHVKELRRRATEV--AYQSADQCDGDGGKVPWAFPSEEDEATLCYCDNE-NRLMRATVCC 153
            H+KEL+R+ +++   YQ   +CD             +      Y D E N ++RA+ CC
Sbjct: 175 QHMKELKRQTSQITDTYQVPTECD-------------DLTVDSSYNDEEGNLVIRASFCC 234

Query: 154 DERSGLNRDLIQAIRSVHARVVRAEMMTLGGRTKNVVVL--EWSGGGDGGGREEAFVG-- 213
            +R+ L  D+I A++S+  R ++AE+ T+GGR KN++ L  E+    D       F G  
Sbjct: 235 QDRTDLMHDVINALKSLRLRTLKAEIATVGGRVKNILFLSREYDDEEDHDSYRRNFDGDD 294

Query: 214 ----------------LRRALKAVVENQAQN 222
                           +  ALKAV+E    N
Sbjct: 295 VEDYDEERMMNNRVSSIEEALKAVIEKCVHN 312

[Close]
BLAST of Carg08238 vs. TAIR 10
Match: AT2G41130.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 8.3e-25
Identity = 70/182 (38.46%), Postives = 119/182 (65.38%), Query Frame = 0 

Query: 45  EKKSTEASRSHKEAERRRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRAT 104
           + ++  A R+HKEAERRRR+RINSHL+ LR +L   +KTDKA+LLA+VV  V+EL+++  
Sbjct: 61  QDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQTL 120

Query: 105 EVAYQSADQCDGDGGKVPWAFPSEEDEATLC----YCDNENRLMRATVCCDERSGLNRDL 164
           E +   +DQ            PSE DE ++     Y ++ + + +A++CC++RS L  DL
Sbjct: 121 ETS--DSDQT---------LLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDL 180

Query: 165 IQAIRSVHARVVRAEMMTLGGRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQAQ 223
           ++ ++S++ + +RAEM+T+GGRT++V+V+       G    E+   L+ ALK+++E  ++
Sbjct: 181 MEILKSLNMKTLRAEMVTIGGRTRSVLVVAADKEMHG---VESVHFLQNALKSLLERSSK 228

[Close]
BLAST of Carg08238 vs. TAIR 10
Match: AT4G38070.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 108.2 bits (269), Expect = 9.2e-24
Identity = 68/180 (37.78%), Postives = 101/180 (56.11%), Query Frame = 0 

Query: 42   SKDEKKSTEASRSHKEAERRRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRR 101
            SK E K   A++ H +AERRRR RINS  +TLRTILPN  K DKAS+L E V +  EL++
Sbjct: 1341 SKTESKEV-AAKKHSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKK 1400

Query: 102  RATEVAYQSADQCDGDGGKVPWAFPSEEDEATLCYCDNENRLMRATVCCDERSGLNRDLI 161
               ++                   PS ED   L +C+N   L R    C +R GL  ++ 
Sbjct: 1401 MVQDIP----------------TTPSLEDNLRLDHCNNNRDLARVVFSCSDREGLMSEVA 1460

Query: 162  QAIRSVHARVVRAEMMTLGGRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQAQN 221
            +++++V A+ VRAE+MT+GGRTK  + ++   G +G       V L+++LK VV  ++ +
Sbjct: 1461 ESMKAVKAKAVRAEIMTVGGRTKCALFVQGVNGNEG------LVKLKKSLKLVVNGKSSS 1497

[Close]
BLAST of Carg08238 vs. TAIR 10
Match: AT3G56770.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 3.3e-21
Identity = 65/188 (34.57%), Postives = 113/188 (60.11%), Query Frame = 0 

Query: 45  EKKSTEASRSHKEAERRRRQRINSHLSTLRTILPNTTKTDKASLLAEVVSHVKELRRRAT 104
           E K+  + R+HKEAER+RR RINSHL+ LR +L   +KTDK++LLA+VV  VKEL+++  
Sbjct: 39  EDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQTL 98

Query: 105 EVAYQSADQCDGDGGKVPWAFPSEEDEATLCYCDNENR------LMRATVCCDERSGLNR 164
           E+  ++               PSE DE ++   ++ +R      + + + CC++R  L +
Sbjct: 99  EITDET--------------IPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELLK 158

Query: 165 DLIQAIRSVHARVVRAEMMTLGGRTKNVVVLEWSGGGDGGGREEAFVGLRRALKAVVENQ 224
           DL++ ++S+    + A+M T+GGRT+NV+V+       G    ++   L+ ALK+++E  
Sbjct: 159 DLMETLKSLQMETLFADMTTVGGRTRNVLVVAADKEHHG---VQSVNFLQNALKSLLERS 209

Query: 225 AQN-LSGH 226
           +++ + GH
Sbjct: 219 SKSVMVGH 209

The following BLAST results are available for this feature:
BLAST of Carg08238 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7029677.15.6e-132100.00Transcription factor AIG1, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022962219.16.2e-13199.17transcription factor bHLH30-like [Cucurbita moschata][more]
KAG6598734.15.2e-13098.76Transcription factor AIG1, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023546949.16.4e-12897.10transcription factor bHLH30-like [Cucurbita pepo subsp. pepo][more]
XP_022997251.16.9e-12293.88transcription factor bHLH30-like [Cucurbita maxima][more]
BLAST of Carg08238 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9S7Y12.7e-2841.57Transcription factor bHLH30 OS=Arabidopsis thaliana OX=3702 GN=BHLH30 PE=1 SV=1[more]
Q9LS088.7e-2738.86Transcription factor AIG1 OS=Arabidopsis thaliana OX=3702 GN=BHLH32 PE=1 SV=1[more]
O806741.2e-2338.46Transcription factor bHLH106 OS=Arabidopsis thaliana OX=3702 GN=BHLH106 PE=2 SV=... [more]
P0CB251.3e-2237.78Transcription factor bHLH131 OS=Arabidopsis thaliana OX=3702 GN=BHLH131 PE=2 SV=... [more]
Q9LET04.6e-2034.57Putative transcription factor bHLH107 OS=Arabidopsis thaliana OX=3702 GN=BHLH107... [more]
BLAST of Carg08238 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HGG03.0e-13199.17transcription factor bHLH30-like OS=Cucurbita moschata OX=3662 GN=LOC111462735 P... [more]
A0A6J1K7033.3e-12293.88transcription factor bHLH30-like OS=Cucurbita maxima OX=3661 GN=LOC111492211 PE=... [more]
A0A0A0LPM75.2e-9980.17BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G370560 PE=4 S... [more]
A0A5A7VHZ11.5e-9879.67Transcription factor bHLH30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
A0A1S3BBI71.5e-9879.67transcription factor bHLH30-like OS=Cucumis melo OX=3656 GN=LOC103488129 PE=4 SV... [more]
BLAST of Carg08238 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G68810.11.9e-2941.57basic helix-loop-helix (bHLH) DNA-binding superfamily protein [more]
AT3G25710.16.2e-2838.86basic helix-loop-helix 32 [more]
AT2G41130.18.3e-2538.46basic helix-loop-helix (bHLH) DNA-binding superfamily protein [more]
AT4G38070.19.2e-2437.78basic helix-loop-helix (bHLH) DNA-binding superfamily protein [more]
AT3G56770.13.3e-2134.57basic helix-loop-helix (bHLH) DNA-binding superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 56..105
e-value: 1.3E-12
score: 57.9
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 53..99
e-value: 6.6E-13
score: 48.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 50..99
score: 16.634203
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 44..109
e-value: 4.9E-15
score: 57.0
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 53..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..65
NoneNo IPR availablePANTHERPTHR45844TRANSCRIPTION FACTOR BHLH30coord: 37..230
NoneNo IPR availablePANTHERPTHR45844:SF16OS09G0463900 PROTEINcoord: 37..230
NoneNo IPR availableCDDcd11455bHLH_AtAIG1_likecoord: 45..121
e-value: 3.47266E-32
score: 110.846

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg08238-RACarg08238-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
molecular_function GO:0046983 protein dimerization activity