Carg08206 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08206
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RING-type E3 ubiquitin transferase
Location	Carg_Chr05: 2649648 .. 2650544 (+)
RNA-Seq Expression	Carg08206
Synteny	Carg08206

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTCGGAATTACCAGAAAGCTTTTCCCCGTCGCAGCTGGAACTCACCAACAAAGCTTCAATTGTTCTGCCTGCCCTTACGACTGCCCTTTCGACTGCTTAGATCTCCCAGATTTCTACTTCTCGCCGCCGCCGCCGCCGCCGCCGCTGCCGCCTTTTGGCGACCACCAAAAACAGCTTCCAACTATAGTCATCGTCATACTTGCTCTGTTTGTTGGGTTCTTCTTCACTTTTAGTTTCTACATCATTATCGTAAAATGCCAAGCTTGGCGTAGCGGCTCCGGCAACCAAGGGGCGGAGGCGTCGCAATTGAACGGCGAAGATGGAGAATTTCTAAACGAGAATCAAGTCGATCATCCCATTTGGTTCATAACCACCGTCGGGCTGCAACAATCGATCATCAACTCAATCACGGTTTGCAAATACAAGAAAGGTGAGGGCTTGATCGAAGGAACAGTTTGCTCTGTTTGTTTGAATGAATTTCAAGAAGACGAAATGCTCCGGCTGTTACCCAAATGTAGCCACGCGTTTCATATTGGGTGCGTTGATACTTGGCTGAGGTCTCATACCACTTGTCCACTCTGTCGGGCCCATATTCTTACTGATTTTCCGACCTCCAACGCCGCGAGACCGCCGAATTCGGGTCATTTGAATCAAAACGAAGCTAATTTGGGTGTAATTCAGGAGACCCAGATGGAGAATTTGGAGGGGGAAGAACAGAGTGCTGTCTCCGGCGGCGGCGGCGTTGAAAACAGAGGAGATGCAGTTGATGAACAGAGAGACATTGGGGTTCCTCAGATTGGGGAGATTGCTCCAAAAGAAGGGGTTTTTGAATCCGATGATTCTAAAATGGAAGTAACTGAAACAACGATGAACTGTTCTTCTGCAACATGA

mRNA sequence

ATGGCGGTCGGAATTACCAGAAAGCTTTTCCCCGTCGCAGCTGGAACTCACCAACAAAGCTTCAATTGTTCTGCCTGCCCTTACGACTGCCCTTTCGACTGCTTAGATCTCCCAGATTTCTACTTCTCGCCGCCGCCGCCGCCGCCGCCGCTGCCGCCTTTTGGCGACCACCAAAAACAGCTTCCAACTATAGTCATCGTCATACTTGCTCTGTTTGTTGGGTTCTTCTTCACTTTTAGTTTCTACATCATTATCGTAAAATGCCAAGCTTGGCGTAGCGGCTCCGGCAACCAAGGGGCGGAGGCGTCGCAATTGAACGGCGAAGATGGAGAATTTCTAAACGAGAATCAAGTCGATCATCCCATTTGGTTCATAACCACCGTCGGGCTGCAACAATCGATCATCAACTCAATCACGGTTTGCAAATACAAGAAAGGTGAGGGCTTGATCGAAGGAACAGTTTGCTCTGTTTGTTTGAATGAATTTCAAGAAGACGAAATGCTCCGGCTGTTACCCAAATGTAGCCACGCGTTTCATATTGGGTGCGTTGATACTTGGCTGAGGTCTCATACCACTTGTCCACTCTGTCGGGCCCATATTCTTACTGATTTTCCGACCTCCAACGCCGCGAGACCGCCGAATTCGGGTCATTTGAATCAAAACGAAGCTAATTTGGGTGTAATTCAGGAGACCCAGATGGAGAATTTGGAGGGGGAAGAACAGAGTGCTGTCTCCGGCGGCGGCGGCGTTGAAAACAGAGGAGATGCAGTTGATGAACAGAGAGACATTGGGGTTCCTCAGATTGGGGAGATTGCTCCAAAAGAAGGGGTTTTTGAATCCGATGATTCTAAAATGGAAGTAACTGAAACAACGATGAACTGTTCTTCTGCAACATGA

Coding sequence (CDS)

ATGGCGGTCGGAATTACCAGAAAGCTTTTCCCCGTCGCAGCTGGAACTCACCAACAAAGCTTCAATTGTTCTGCCTGCCCTTACGACTGCCCTTTCGACTGCTTAGATCTCCCAGATTTCTACTTCTCGCCGCCGCCGCCGCCGCCGCCGCTGCCGCCTTTTGGCGACCACCAAAAACAGCTTCCAACTATAGTCATCGTCATACTTGCTCTGTTTGTTGGGTTCTTCTTCACTTTTAGTTTCTACATCATTATCGTAAAATGCCAAGCTTGGCGTAGCGGCTCCGGCAACCAAGGGGCGGAGGCGTCGCAATTGAACGGCGAAGATGGAGAATTTCTAAACGAGAATCAAGTCGATCATCCCATTTGGTTCATAACCACCGTCGGGCTGCAACAATCGATCATCAACTCAATCACGGTTTGCAAATACAAGAAAGGTGAGGGCTTGATCGAAGGAACAGTTTGCTCTGTTTGTTTGAATGAATTTCAAGAAGACGAAATGCTCCGGCTGTTACCCAAATGTAGCCACGCGTTTCATATTGGGTGCGTTGATACTTGGCTGAGGTCTCATACCACTTGTCCACTCTGTCGGGCCCATATTCTTACTGATTTTCCGACCTCCAACGCCGCGAGACCGCCGAATTCGGGTCATTTGAATCAAAACGAAGCTAATTTGGGTGTAATTCAGGAGACCCAGATGGAGAATTTGGAGGGGGAAGAACAGAGTGCTGTCTCCGGCGGCGGCGGCGTTGAAAACAGAGGAGATGCAGTTGATGAACAGAGAGACATTGGGGTTCCTCAGATTGGGGAGATTGCTCCAAAAGAAGGGGTTTTTGAATCCGATGATTCTAAAATGGAAGTAACTGAAACAACGATGAACTGTTCTTCTGCAACATGA

Protein sequence

MAVGITRKLFPVAAGTHQQSFNCSACPYDCPFDCLDLPDFYFSPPPPPPPLPPFGDHQKQLPTIVIVILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQVDHPIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHIGCVDTWLRSHTTCPLCRAHILTDFPTSNAARPPNSGHLNQNEANLGVIQETQMENLEGEEQSAVSGGGGVENRGDAVDEQRDIGVPQIGEIAPKEGVFESDDSKMEVTETTMNCSSAT

Homology

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BLAST of Carg08206 vs. NCBI nr
Match: KAG7029647.1 (RING-H2 finger protein ATL54, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 611.3 bits (1575), Expect = 4.4e-171
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 1   MAVGITRKLFPVAAGTHQQSFNCSACPYDCPFDCLDLPDFYFSPPPPPPPLPPFGDHQKQ 60
           MAVGITRKLFPVAAGTHQQSFNCSACPYDCPFDCLDLPDFYFSPPPPPPPLPPFGDHQKQ
Sbjct: 1   MAVGITRKLFPVAAGTHQQSFNCSACPYDCPFDCLDLPDFYFSPPPPPPPLPPFGDHQKQ 60

Query: 61  LPTIVIVILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQVDH 120
           LPTIVIVILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQVDH
Sbjct: 61  LPTIVIVILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQVDH 120

Query: 121 PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI 180
           PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI
Sbjct: 121 PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI 180

Query: 181 GCVDTWLRSHTTCPLCRAHILTDFPTSNAARPPNSGHLNQNEANLGVIQETQMENLEGEE 240
           GCVDTWLRSHTTCPLCRAHILTDFPTSNAARPPNSGHLNQNEANLGVIQETQMENLEGEE
Sbjct: 181 GCVDTWLRSHTTCPLCRAHILTDFPTSNAARPPNSGHLNQNEANLGVIQETQMENLEGEE 240

Query: 241 QSAVSGGGGVENRGDAVDEQRDIGVPQIGEIAPKEGVFESDDSKMEVTETTMNCSSAT 299
           QSAVSGGGGVENRGDAVDEQRDIGVPQIGEIAPKEGVFESDDSKMEVTETTMNCSSAT
Sbjct: 241 QSAVSGGGGVENRGDAVDEQRDIGVPQIGEIAPKEGVFESDDSKMEVTETTMNCSSAT 298

[Close]

BLAST of Carg08206 vs. NCBI nr
Match: KAG6598705.1 (RING-H2 finger protein ATL54, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 603.6 bits (1555), Expect = 9.2e-169
Identity = 296/298 (99.33%), Postives = 297/298 (99.66%), Query Frame = 0


Query: 1   MAVGITRKLFPVAAGTHQQSFNCSACPYDCPFDCLDLPDFYFSPPPPPPPLPPFGDHQKQ 60
           MAVGITRKLFPVAAGTHQQSFNCSACPYDCPFDCLDLPDFYFS PPPPPPLPPFGDHQKQ
Sbjct: 1   MAVGITRKLFPVAAGTHQQSFNCSACPYDCPFDCLDLPDFYFS-PPPPPPLPPFGDHQKQ 60

Query: 61  LPTIVIVILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQVDH 120
           LPTIVIVILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQVDH
Sbjct: 61  LPTIVIVILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQVDH 120

Query: 121 PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI 180
           PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI
Sbjct: 121 PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI 180

Query: 181 GCVDTWLRSHTTCPLCRAHILTDFPTSNAARPPNSGHLNQNEANLGVIQETQMENLEGEE 240
           GCVDTWLR+HTTCPLCRAHILTDFPTSNAARPPNSGHLNQNEANLGVIQETQMENLEGEE
Sbjct: 181 GCVDTWLRTHTTCPLCRAHILTDFPTSNAARPPNSGHLNQNEANLGVIQETQMENLEGEE 240

Query: 241 QSAVSGGGGVENRGDAVDEQRDIGVPQIGEIAPKEGVFESDDSKMEVTETTMNCSSAT 299
           QSAVSGGGGVENRGDAVDEQRDIGVPQIGEIAPKEGVFESDDSKMEVTETTMNCSSAT
Sbjct: 241 QSAVSGGGGVENRGDAVDEQRDIGVPQIGEIAPKEGVFESDDSKMEVTETTMNCSSAT 297

[Close]

BLAST of Carg08206 vs. NCBI nr
Match: XP_022962175.1 (RING-H2 finger protein ATL54-like [Cucurbita moschata])

HSP 1 Score: 591.3 bits (1523), Expect = 4.7e-165
Identity = 291/298 (97.65%), Postives = 293/298 (98.32%), Query Frame = 0


Query: 1   MAVGITRKLFPVAAGTHQQSFNCSACPYDCPFDCLDLPDFYFSPPPPPPPLPPFGDHQKQ 60
           MAVGITRKLFPVAAGTHQQSFNCSACPYDCPFDCLDLPDFYFS PPPP PLPPFGDHQKQ
Sbjct: 1   MAVGITRKLFPVAAGTHQQSFNCSACPYDCPFDCLDLPDFYFS-PPPPLPLPPFGDHQKQ 60

Query: 61  LPTIVIVILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQVDH 120
           LPTIVIVILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQVDH
Sbjct: 61  LPTIVIVILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQVDH 120

Query: 121 PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI 180
           PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI
Sbjct: 121 PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI 180

Query: 181 GCVDTWLRSHTTCPLCRAHILTDFPTSNAARPPNSGHLNQNEANLGVIQETQMENLEGEE 240
           GCVDTWLR+HTTCPLCRAHILTDFPTSNAARPPNSGHLNQNEANLGVI+ETQMENLEGEE
Sbjct: 181 GCVDTWLRTHTTCPLCRAHILTDFPTSNAARPPNSGHLNQNEANLGVIEETQMENLEGEE 240

Query: 241 QSAVSGGGGVENRGDAVDEQRDIGVPQIGEIAPKEGVFESDDSKMEVTETTMNCSSAT 299
           QSAVSGGGGVENRGDAV EQRDIGVPQIGEI PKEGVFESDDSKMEVTET MNCSSAT
Sbjct: 241 QSAVSGGGGVENRGDAVYEQRDIGVPQIGEIVPKEGVFESDDSKMEVTETMMNCSSAT 297

[Close]

BLAST of Carg08206 vs. NCBI nr
Match: XP_023546737.1 (RING-H2 finger protein ATL54-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 573.2 bits (1476), Expect = 1.3e-159
Identity = 280/298 (93.96%), Postives = 285/298 (95.64%), Query Frame = 0


Query: 1   MAVGITRKLFPVAAGTHQQSFNCSACPYDCPFDCLDLPDFYFSPPPPPPPLPPFGDHQKQ 60
           MAVGITRKLFPVA GTHQQSFNCSACPYDCP DCLDLPDFYFSPPPPP   PPF DHQKQ
Sbjct: 1   MAVGITRKLFPVATGTHQQSFNCSACPYDCPLDCLDLPDFYFSPPPPP---PPFDDHQKQ 60

Query: 61  LPTIVIVILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQVDH 120
           LPTIVIVILALFVGFFFTFSFYII+VKCQAWRSGSGNQGAE SQL+GEDGEFLNENQVDH
Sbjct: 61  LPTIVIVILALFVGFFFTFSFYIIVVKCQAWRSGSGNQGAETSQLDGEDGEFLNENQVDH 120

Query: 121 PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI 180
           PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDE+LRLLPKCSHAFHI
Sbjct: 121 PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDELLRLLPKCSHAFHI 180

Query: 181 GCVDTWLRSHTTCPLCRAHILTDFPTSNAARPPNSGHLNQNEANLGVIQETQMENLEGEE 240
           GCVDTWLR+HTTCPLCRAHILTDFPTSN ARPPNSGHLNQNEANL VI+ETQMENLEGEE
Sbjct: 181 GCVDTWLRTHTTCPLCRAHILTDFPTSNTARPPNSGHLNQNEANLVVIEETQMENLEGEE 240

Query: 241 QSAVSGGGGVENRGDAVDEQRDIGVPQIGEIAPKEGVFESDDSKMEVTETTMNCSSAT 299
           QSAVSGGGGVENRGDAVDEQRDIGVP IGEI PKEGVFESDDSKMEV ET MNCSSAT
Sbjct: 241 QSAVSGGGGVENRGDAVDEQRDIGVPPIGEIVPKEGVFESDDSKMEVNETMMNCSSAT 295

[Close]

BLAST of Carg08206 vs. NCBI nr
Match: XP_022997232.1 (RING-H2 finger protein ATL54-like [Cucurbita maxima])

HSP 1 Score: 562.8 bits (1449), Expect = 1.8e-156
Identity = 276/298 (92.62%), Postives = 281/298 (94.30%), Query Frame = 0


Query: 1   MAVGITRKLFPVAAGTHQQSFNCSACPYDCPFDCLDLPDFYFSPPPPPPPLPPFGDHQKQ 60
           MAVGITRKLFPV  GTHQQSFNCS CPYDCPFDCLDLPDFYFSPP      PPFGDHQKQ
Sbjct: 1   MAVGITRKLFPVETGTHQQSFNCSGCPYDCPFDCLDLPDFYFSPP------PPFGDHQKQ 60

Query: 61  LPTIVIVILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQVDH 120
           LPTIVIVILALFVGFFFTFSFYIIIVK QAWRSGSGNQGAEASQL+GEDGEFLNENQVDH
Sbjct: 61  LPTIVIVILALFVGFFFTFSFYIIIVKWQAWRSGSGNQGAEASQLDGEDGEFLNENQVDH 120

Query: 121 PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI 180
           PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI
Sbjct: 121 PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI 180

Query: 181 GCVDTWLRSHTTCPLCRAHILTDFPTSNAARPPNSGHLNQNEANLGVIQETQMENLEGEE 240
           GCVDTWLR+HTTCPLCRAHILTDF TSN  RPPNSGH+NQNEANL VI+ETQMENLEGEE
Sbjct: 181 GCVDTWLRTHTTCPLCRAHILTDFATSNFPRPPNSGHVNQNEANLAVIEETQMENLEGEE 240

Query: 241 QSAVSGGGGVENRGDAVDEQRDIGVPQIGEIAPKEGVFESDDSKMEVTETTMNCSSAT 299
           QSAVSGGGGVENRGDAVDEQRD+GVPQIGEI PKEGVFESDDSKMEV ET MNCSSAT
Sbjct: 241 QSAVSGGGGVENRGDAVDEQRDVGVPQIGEIVPKEGVFESDDSKMEVNETMMNCSSAT 292

[Close]

BLAST of Carg08206 vs. ExPASy Swiss-Prot
Match: Q8LFY8 (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2)

HSP 1 Score: 174.9 bits (442), Expect = 1.4e-42
Identity = 120/285 (42.11%), Postives = 145/285 (50.88%), Query Frame = 0


Query: 7   RKLFPVAAGTHQQSFNCS--ACPYDCPFDCLDLPDFY----------FSPPPPPPPLP-- 66
           RKLFP  A    ++ +CS   C   CP++C   PD+Y           SP P P P P  
Sbjct: 7   RKLFPTLASETNKTLDCSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSPCPSPSI 66

Query: 67  -----PFGDHQKQLPTIVI------VILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAE 126
                P  D    L  I I      V+  L  GFF    F+   V          NQG  
Sbjct: 67  SAVYLPSQDSSSSLDAISIITITGAVLAILLTGFFLVAKFFSDSV-------NRVNQGTY 126

Query: 127 ASQLNGED----GEFLNENQVDHPIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSV 186
            S     D     EF +  QVDHPIW I T GLQQSIINSIT+C YK+G+GLIE T C V
Sbjct: 127 QSDNEDNDTVMEEEFQDREQVDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPV 186

Query: 187 CLNEFQEDEMLRLLPKCSHAFHIGCVDTWLRSHTTCPLCRAHILTDFPTSNAARPPNSGH 246
           CLNEF+EDE LRLLPKC+HAFHI C+DTWL SHT CPLCRA I     T+    P  SG 
Sbjct: 187 CLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMISVTT----PRYSGP 246

Query: 247 LNQNEANLGVIQETQMENLEGEEQSAVSGGGGVENRGDAVDEQRD 263
           +       G    + +EN   +E+      G +ENR D+  ++ D
Sbjct: 247 VEVTPGGSG----SHLENDGVDEED----HGEIENRVDSDFKESD 272

[Close]

BLAST of Carg08206 vs. ExPASy Swiss-Prot
Match: Q9LX93 (E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.9e-37
Identity = 84/171 (49.12%), Postives = 106/171 (61.99%), Query Frame = 0


Query: 34  CLDLPDFYF---SPPPPPPPLPPFGDHQKQLPTIVIVILALFVGFFFTFSFYIIIVKCQA 93
           CL   D  F     PPPPPP PP  +    LPT + V+ ++ +  F  F  Y+ I + + 
Sbjct: 12  CLQFKDLRFCFRQYPPPPPPPPPPRELSLLLPTSICVVGSIILFLFLVFFLYLHITQQRR 71

Query: 94  WRSGSGNQGAEASQLNGEDGEFLNENQVDHPIWFITTVGLQQSIINSITVCKYKKGEGLI 153
             + S   G + +Q   ED     +    H +W I TVGL +S INSITV  +KKGEG+I
Sbjct: 72  ISAASVTPG-DTNQQEDEDETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGII 131

Query: 154 EGTVCSVCLNEFQEDEMLRLLPKCSHAFHIGCVDTWLRSHTTCPLCRAHIL 202
           +GT CSVCLNEF+EDE LRLLPKCSHAFH+ C+DTWL SH  CPLCRA +L
Sbjct: 132 DGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVL 181

[Close]

BLAST of Carg08206 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 2.3e-29
Identity = 102/300 (34.00%), Postives = 143/300 (47.67%), Query Frame = 0


Query: 17  HQQSFNCS--ACPYDCPFDCLDLPDFYFSPPPPPPPLPPFGDHQKQLPT---IVIVILAL 76
           ++ + +CS   C   CP  C     ++  PPPPP  +          P    +VI I+ +
Sbjct: 11  YEPTRDCSQGLCSMYCPQWC-----YFIFPPPPPFDVAGTSADDSSGPVFSPLVIAIIGV 70

Query: 77  FVGFFFTFSFYIIIVK-CQAWRS------GSGNQGAEASQLNGEDGEFLNENQVDHPIWF 136
               F   S+Y  I K C    S      GS + GA      G  G   +     H  W 
Sbjct: 71  LASAFLLVSYYTFISKYCGTVSSLRGRVFGSSSGGAAYGGGAGSGGRHGHGQSRSHESWN 130

Query: 137 IT-TVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHIGCV 196
           ++   GL +++IN ITVCKY++G+G +  T CSVCL EF + E LRLLP+CSHAFH  C+
Sbjct: 131 VSPPSGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCI 190

Query: 197 DTWLRSHTTCPLCRAHIL-----TDFPTSNAARPPNSGHLNQNEANLGVIQETQMENLEG 256
           DTWL+SH+ CPLCRA+I         P      P  +G  N +E    V+    +ENL  
Sbjct: 191 DTWLKSHSNCPLCRANITFVTVGLASPEPEGCAPGETGGDNTHEV---VVVMDGLENLCE 250

Query: 257 EEQSAVSGGGGVENRGDAVDEQRDI----GVPQIGE--IAPKEGVFESD---DSKMEVTE 290
           E+Q AVS     ++  DA D    +    G  +I E    PK G    D   D++M + +
Sbjct: 251 EQQEAVSRASTADDDHDAKDVAEGMEEANGAAEIREEGSPPKRGASSFDLHRDNRMCIAD 302

[Close]

BLAST of Carg08206 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 8.2e-27
Identity = 80/201 (39.80%), Postives = 107/201 (53.23%), Query Frame = 0


Query: 15  GTHQQSF-NCS--ACPYDCPFDCLDLPDFYFSPPPPPPPLPPFGD-HQKQLPTIVIVILA 74
           GT   S+ +CS   C   CP  C     +   PPPP   L    D        ++I ++ 
Sbjct: 11  GTTYDSYRDCSQGVCSVYCPQWC-----YVIFPPPPSFYLDDEDDSSSSDFSPLLIALIG 70

Query: 75  LFVGFFFTFSFYIIIVK-CQAWRSGSGNQGAEA-----SQLNGEDGEFLNENQVDHPIWF 134
           +    F   S+Y +I K C   R  S +  A A     S    +     N N   +P   
Sbjct: 71  ILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGATNPNQT 130

Query: 135 I---TTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHIG 194
           I      GL +S+I SITV KY+K +G +E + CSVCL+EFQE+E LRLLPKC+HAFH+ 
Sbjct: 131 IGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVP 190

Query: 195 CVDTWLRSHTTCPLCRAHILT 203
           C+DTWL+SH+ CPLCRA I+T
Sbjct: 191 CIDTWLKSHSNCPLCRAFIVT 206

[Close]

BLAST of Carg08206 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.5e-25
Identity = 81/228 (35.53%), Postives = 121/228 (53.07%), Query Frame = 0


Query: 27  PYDCPFDC------LDLPDFYFSPPPPPPPLPPFGD----HQKQLPTIVIVILALFVGFF 86
           PYD   DC      +  P + +   PPPPP     D           ++I ++ +     
Sbjct: 10  PYDSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSAL 69

Query: 87  FTFSFYIIIVK-CQAWRSGSGNQGAEASQLNGEDGEFLNENQVDHPIWFITTVGLQQSII 146
              S+Y +I K C      S ++    +  NGE G F +  ++          GL +S+I
Sbjct: 70  ILVSYYTLISKYCHRHHQTSSSETLNLNH-NGE-GFFSSTQRIS-----TNGDGLNESMI 129

Query: 147 NSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHIGCVDTWLRSHTTCPL 206
            SITV KYK G+G ++G+ CSVCL+EF+E+E LRLLPKC+HAFH+ C+DTWL+SH+ CPL
Sbjct: 130 KSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPL 189

Query: 207 CRAHIL-TDFPTSNAARPPNSGHLNQNEA--NLGVIQETQMENLEGEE 241
           CRA +   + PT++  +  +    NQ+ +    G + E  + NL G E
Sbjct: 190 CRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINL-NLAGYE 229

[Close]

BLAST of Carg08206 vs. ExPASy TrEMBL
Match: A0A6J1HEB6 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111462708 PE=3 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 2.3e-165
Identity = 291/298 (97.65%), Postives = 293/298 (98.32%), Query Frame = 0


Query: 1   MAVGITRKLFPVAAGTHQQSFNCSACPYDCPFDCLDLPDFYFSPPPPPPPLPPFGDHQKQ 60
           MAVGITRKLFPVAAGTHQQSFNCSACPYDCPFDCLDLPDFYFS PPPP PLPPFGDHQKQ
Sbjct: 1   MAVGITRKLFPVAAGTHQQSFNCSACPYDCPFDCLDLPDFYFS-PPPPLPLPPFGDHQKQ 60

Query: 61  LPTIVIVILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQVDH 120
           LPTIVIVILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQVDH
Sbjct: 61  LPTIVIVILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQVDH 120

Query: 121 PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI 180
           PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI
Sbjct: 121 PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI 180

Query: 181 GCVDTWLRSHTTCPLCRAHILTDFPTSNAARPPNSGHLNQNEANLGVIQETQMENLEGEE 240
           GCVDTWLR+HTTCPLCRAHILTDFPTSNAARPPNSGHLNQNEANLGVI+ETQMENLEGEE
Sbjct: 181 GCVDTWLRTHTTCPLCRAHILTDFPTSNAARPPNSGHLNQNEANLGVIEETQMENLEGEE 240

Query: 241 QSAVSGGGGVENRGDAVDEQRDIGVPQIGEIAPKEGVFESDDSKMEVTETTMNCSSAT 299
           QSAVSGGGGVENRGDAV EQRDIGVPQIGEI PKEGVFESDDSKMEVTET MNCSSAT
Sbjct: 241 QSAVSGGGGVENRGDAVYEQRDIGVPQIGEIVPKEGVFESDDSKMEVTETMMNCSSAT 297

[Close]

BLAST of Carg08206 vs. ExPASy TrEMBL
Match: A0A6J1K4G1 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111492196 PE=3 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 8.8e-157
Identity = 276/298 (92.62%), Postives = 281/298 (94.30%), Query Frame = 0


Query: 1   MAVGITRKLFPVAAGTHQQSFNCSACPYDCPFDCLDLPDFYFSPPPPPPPLPPFGDHQKQ 60
           MAVGITRKLFPV  GTHQQSFNCS CPYDCPFDCLDLPDFYFSPP      PPFGDHQKQ
Sbjct: 1   MAVGITRKLFPVETGTHQQSFNCSGCPYDCPFDCLDLPDFYFSPP------PPFGDHQKQ 60

Query: 61  LPTIVIVILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQVDH 120
           LPTIVIVILALFVGFFFTFSFYIIIVK QAWRSGSGNQGAEASQL+GEDGEFLNENQVDH
Sbjct: 61  LPTIVIVILALFVGFFFTFSFYIIIVKWQAWRSGSGNQGAEASQLDGEDGEFLNENQVDH 120

Query: 121 PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI 180
           PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI
Sbjct: 121 PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI 180

Query: 181 GCVDTWLRSHTTCPLCRAHILTDFPTSNAARPPNSGHLNQNEANLGVIQETQMENLEGEE 240
           GCVDTWLR+HTTCPLCRAHILTDF TSN  RPPNSGH+NQNEANL VI+ETQMENLEGEE
Sbjct: 181 GCVDTWLRTHTTCPLCRAHILTDFATSNFPRPPNSGHVNQNEANLAVIEETQMENLEGEE 240

Query: 241 QSAVSGGGGVENRGDAVDEQRDIGVPQIGEIAPKEGVFESDDSKMEVTETTMNCSSAT 299
           QSAVSGGGGVENRGDAVDEQRD+GVPQIGEI PKEGVFESDDSKMEV ET MNCSSAT
Sbjct: 241 QSAVSGGGGVENRGDAVDEQRDVGVPQIGEIVPKEGVFESDDSKMEVNETMMNCSSAT 292

[Close]

BLAST of Carg08206 vs. ExPASy TrEMBL
Match: A0A0A0LPJ4 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_2G369190 PE=3 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 3.9e-112
Identity = 216/312 (69.23%), Postives = 243/312 (77.88%), Query Frame = 0


Query: 1   MAVGITRKLFPVAAGTHQQSFNCSACPYDCPFDCLDLPDFYFSPPPPPPPLPPFGDHQKQ 60
           MAV ++RKLFPVA GT   + NCSACPYDCP+DC   PD YFSPPPPPPPL    DHQKQ
Sbjct: 1   MAVTLSRKLFPVATGTALPTTNCSACPYDCPYDCYGFPDLYFSPPPPPPPL---SDHQKQ 60

Query: 61  LPTIVIVILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQVDH 120
           LPT  I+IL LF+ FF  F+FYII+VKC++W SGS N+GAEA Q +G +GEF+NENQVDH
Sbjct: 61  LPT-TIIILILFIAFFVAFTFYIIVVKCRSWYSGSANEGAEALQSDGGEGEFMNENQVDH 120

Query: 121 PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI 180
           PIWFITT GLQQS+INSITVCKYKK EGLIEGT CSVCL+EFQEDEMLRLLPKCSHAFHI
Sbjct: 121 PIWFITTAGLQQSVINSITVCKYKKSEGLIEGTDCSVCLSEFQEDEMLRLLPKCSHAFHI 180

Query: 181 GCVDTWLRSHTTCPLCRAHILTDFPTSNAARPPNSGHLNQNEANLGVIQETQMENLEGEE 240
           GCVDTWLR+HTTCPLCRAHILTDF T N+ RPPN G LNQNE NLG+ ++TQMEN E   
Sbjct: 181 GCVDTWLRTHTTCPLCRAHILTDFTTPNSVRPPNIGPLNQNEGNLGLNEDTQMEN-ENTN 240

Query: 241 QSAV--SGGGGV-------ENRGDAVDEQRDIGVPQIGEIAPKEGVFESDDSKMEVTET- 299
           + AV  + GGGV       ENRGDAVDEQR     ++ EI  KEG FESDDSK+E  E+ 
Sbjct: 241 REAVRENEGGGVSISSESSENRGDAVDEQR-----EVEEIVQKEGNFESDDSKVEGNESM 300

[Close]

BLAST of Carg08206 vs. ExPASy TrEMBL
Match: A0A5A7VDK2 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004620 PE=3 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 8.6e-112
Identity = 211/303 (69.64%), Postives = 239/303 (78.88%), Query Frame = 0


Query: 1   MAVGITRKLFPVAAGTHQQSFNCSACPYDCPFDCLDLPDFYFSPPPPPPPLPPFGDHQKQ 60
           MAV  +RKLFPVA GT Q + NCSACPYDCP+DC   PD YFSPPPPPPPL    DHQKQ
Sbjct: 1   MAVTHSRKLFPVATGTTQPTTNCSACPYDCPYDCYGFPDLYFSPPPPPPPL---FDHQKQ 60

Query: 61  LPTIVIVILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQVDH 120
           LPT++IV++ LFV FF  F+FYII+VKC++W SGSGN+GAEA Q +G +GEF+NENQVDH
Sbjct: 61  LPTMIIVLI-LFVAFFIAFTFYIIVVKCRSWYSGSGNEGAEALQSDGGEGEFMNENQVDH 120

Query: 121 PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI 180
           PIWFITT GLQQS+INSITVCKYKK EGLIEGT CSVCL+EFQEDEMLRLLPKCSHAFHI
Sbjct: 121 PIWFITTAGLQQSVINSITVCKYKKSEGLIEGTDCSVCLSEFQEDEMLRLLPKCSHAFHI 180

Query: 181 GCVDTWLRSHTTCPLCRAHILTDFPT--SNAARPPNSGHLNQNEANLGVIQETQMENLEG 240
           GCVDTWLR+HTTCPLCRAHILTDF T  SN+ RPPN G LNQNE NLG+ ++TQMEN   
Sbjct: 181 GCVDTWLRTHTTCPLCRAHILTDFTTSNSNSIRPPNLGPLNQNEGNLGLNEDTQMENENI 240

Query: 241 EEQSAVSGGGGV--------ENRGDAVDEQRDIGVPQIGEIAPKEGVFESDDSKMEVTET 294
             ++     GGV        ENRGD VDEQR     ++ EI  KEG FESDDSK+E  E+
Sbjct: 241 NGEAVRENEGGVVSISSESSENRGDVVDEQR-----EVEEIVQKEGNFESDDSKVEGNES 294

[Close]

BLAST of Carg08206 vs. ExPASy TrEMBL
Match: A0A1S3BAW8 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103488086 PE=3 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 8.6e-112
Identity = 211/303 (69.64%), Postives = 239/303 (78.88%), Query Frame = 0


Query: 1   MAVGITRKLFPVAAGTHQQSFNCSACPYDCPFDCLDLPDFYFSPPPPPPPLPPFGDHQKQ 60
           MAV  +RKLFPVA GT Q + NCSACPYDCP+DC   PD YFSPPPPPPPL    DHQKQ
Sbjct: 1   MAVTHSRKLFPVATGTTQPTTNCSACPYDCPYDCYGFPDLYFSPPPPPPPL---FDHQKQ 60

Query: 61  LPTIVIVILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQVDH 120
           LPT++IV++ LFV FF  F+FYII+VKC++W SGSGN+GAEA Q +G +GEF+NENQVDH
Sbjct: 61  LPTMIIVLI-LFVAFFIAFTFYIIVVKCRSWYSGSGNEGAEALQSDGGEGEFMNENQVDH 120

Query: 121 PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI 180
           PIWFITT GLQQS+INSITVCKYKK EGLIEGT CSVCL+EFQEDEMLRLLPKCSHAFHI
Sbjct: 121 PIWFITTAGLQQSVINSITVCKYKKSEGLIEGTDCSVCLSEFQEDEMLRLLPKCSHAFHI 180

Query: 181 GCVDTWLRSHTTCPLCRAHILTDFPT--SNAARPPNSGHLNQNEANLGVIQETQMENLEG 240
           GCVDTWLR+HTTCPLCRAHILTDF T  SN+ RPPN G LNQNE NLG+ ++TQMEN   
Sbjct: 181 GCVDTWLRTHTTCPLCRAHILTDFTTSNSNSIRPPNLGPLNQNEGNLGLNEDTQMENENI 240

Query: 241 EEQSAVSGGGGV--------ENRGDAVDEQRDIGVPQIGEIAPKEGVFESDDSKMEVTET 294
             ++     GGV        ENRGD VDEQR     ++ EI  KEG FESDDSK+E  E+
Sbjct: 241 NGEAVRENEGGVVSISSESSENRGDVVDEQR-----EVEEIVQKEGNFESDDSKVEGNES 294

[Close]

BLAST of Carg08206 vs. TAIR 10
Match: AT1G72220.1 (RING/U-box superfamily protein )

HSP 1 Score: 174.9 bits (442), Expect = 9.9e-44
Identity = 120/285 (42.11%), Postives = 145/285 (50.88%), Query Frame = 0


Query: 7   RKLFPVAAGTHQQSFNCS--ACPYDCPFDCLDLPDFY----------FSPPPPPPPLP-- 66
           RKLFP  A    ++ +CS   C   CP++C   PD+Y           SP P P P P  
Sbjct: 7   RKLFPTLASETNKTLDCSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSPCPSPSI 66

Query: 67  -----PFGDHQKQLPTIVI------VILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAE 126
                P  D    L  I I      V+  L  GFF    F+   V          NQG  
Sbjct: 67  SAVYLPSQDSSSSLDAISIITITGAVLAILLTGFFLVAKFFSDSV-------NRVNQGTY 126

Query: 127 ASQLNGED----GEFLNENQVDHPIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSV 186
            S     D     EF +  QVDHPIW I T GLQQSIINSIT+C YK+G+GLIE T C V
Sbjct: 127 QSDNEDNDTVMEEEFQDREQVDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPV 186

Query: 187 CLNEFQEDEMLRLLPKCSHAFHIGCVDTWLRSHTTCPLCRAHILTDFPTSNAARPPNSGH 246
           CLNEF+EDE LRLLPKC+HAFHI C+DTWL SHT CPLCRA I     T+    P  SG 
Sbjct: 187 CLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMISVTT----PRYSGP 246

Query: 247 LNQNEANLGVIQETQMENLEGEEQSAVSGGGGVENRGDAVDEQRD 263
           +       G    + +EN   +E+      G +ENR D+  ++ D
Sbjct: 247 VEVTPGGSG----SHLENDGVDEED----HGEIENRVDSDFKESD 272

[Close]

BLAST of Carg08206 vs. TAIR 10
Match: AT5G10380.1 (RING/U-box superfamily protein )

HSP 1 Score: 156.8 bits (395), Expect = 2.8e-38
Identity = 84/171 (49.12%), Postives = 106/171 (61.99%), Query Frame = 0


Query: 34  CLDLPDFYF---SPPPPPPPLPPFGDHQKQLPTIVIVILALFVGFFFTFSFYIIIVKCQA 93
           CL   D  F     PPPPPP PP  +    LPT + V+ ++ +  F  F  Y+ I + + 
Sbjct: 12  CLQFKDLRFCFRQYPPPPPPPPPPRELSLLLPTSICVVGSIILFLFLVFFLYLHITQQRR 71

Query: 94  WRSGSGNQGAEASQLNGEDGEFLNENQVDHPIWFITTVGLQQSIINSITVCKYKKGEGLI 153
             + S   G + +Q   ED     +    H +W I TVGL +S INSITV  +KKGEG+I
Sbjct: 72  ISAASVTPG-DTNQQEDEDETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGII 131

Query: 154 EGTVCSVCLNEFQEDEMLRLLPKCSHAFHIGCVDTWLRSHTTCPLCRAHIL 202
           +GT CSVCLNEF+EDE LRLLPKCSHAFH+ C+DTWL SH  CPLCRA +L
Sbjct: 132 DGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVL 181

[Close]

BLAST of Carg08206 vs. TAIR 10
Match: AT4G33565.1 (RING/U-box superfamily protein )

HSP 1 Score: 134.8 bits (338), Expect = 1.1e-31
Identity = 75/180 (41.67%), Postives = 100/180 (55.56%), Query Frame = 0


Query: 24  SACPYDCPFDCLDLPDFYFSPPPPPPPLPPFGDHQKQLPTIVIVILALFVGFFFTFSFYI 83
           S C  +CP  C  +     SPP           H   L  I+I+  +  +   F  +  +
Sbjct: 91  SYCLDECPSICEIVVISGLSPPAEI-------HHDDNLKRILIISASSIITTLFLLTLLV 150

Query: 84  IIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQ--VDHPIWFITTVGLQQSIINSITVC 143
           +  K    R  S       S     + +F       VDHPIW I T+GL  ++I+SI VC
Sbjct: 151 LCFKFYYRRRRSITTSRRWSMEEARNWDFDGPAPVIVDHPIWHIRTIGLNPTVISSIKVC 210

Query: 144 KYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHIGCVDTWLRSHTTCPLCRAHIL 202
           +Y K +G++EGT CSVCL+EF+E+E LRLLPKC HAFH+ C+DTWLRSHT CPLCRA I+
Sbjct: 211 QYSKKDGVVEGTDCSVCLSEFEEEETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCRAPIV 263

[Close]

BLAST of Carg08206 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 5.8e-28
Identity = 80/201 (39.80%), Postives = 107/201 (53.23%), Query Frame = 0


Query: 15  GTHQQSF-NCS--ACPYDCPFDCLDLPDFYFSPPPPPPPLPPFGD-HQKQLPTIVIVILA 74
           GT   S+ +CS   C   CP  C     +   PPPP   L    D        ++I ++ 
Sbjct: 11  GTTYDSYRDCSQGVCSVYCPQWC-----YVIFPPPPSFYLDDEDDSSSSDFSPLLIALIG 70

Query: 75  LFVGFFFTFSFYIIIVK-CQAWRSGSGNQGAEA-----SQLNGEDGEFLNENQVDHPIWF 134
           +    F   S+Y +I K C   R  S +  A A     S    +     N N   +P   
Sbjct: 71  ILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGATNPNQT 130

Query: 135 I---TTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHIG 194
           I      GL +S+I SITV KY+K +G +E + CSVCL+EFQE+E LRLLPKC+HAFH+ 
Sbjct: 131 IGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVP 190

Query: 195 CVDTWLRSHTTCPLCRAHILT 203
           C+DTWL+SH+ CPLCRA I+T
Sbjct: 191 CIDTWLKSHSNCPLCRAFIVT 206

[Close]

BLAST of Carg08206 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-26
Identity = 81/228 (35.53%), Postives = 121/228 (53.07%), Query Frame = 0


Query: 27  PYDCPFDC------LDLPDFYFSPPPPPPPLPPFGD----HQKQLPTIVIVILALFVGFF 86
           PYD   DC      +  P + +   PPPPP     D           ++I ++ +     
Sbjct: 10  PYDSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSAL 69

Query: 87  FTFSFYIIIVK-CQAWRSGSGNQGAEASQLNGEDGEFLNENQVDHPIWFITTVGLQQSII 146
              S+Y +I K C      S ++    +  NGE G F +  ++          GL +S+I
Sbjct: 70  ILVSYYTLISKYCHRHHQTSSSETLNLNH-NGE-GFFSSTQRIS-----TNGDGLNESMI 129

Query: 147 NSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHIGCVDTWLRSHTTCPL 206
            SITV KYK G+G ++G+ CSVCL+EF+E+E LRLLPKC+HAFH+ C+DTWL+SH+ CPL
Sbjct: 130 KSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPL 189

Query: 207 CRAHIL-TDFPTSNAARPPNSGHLNQNEA--NLGVIQETQMENLEGEE 241
           CRA +   + PT++  +  +    NQ+ +    G + E  + NL G E
Sbjct: 190 CRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINL-NLAGYE 229

The following BLAST results are available for this feature:

BLAST of Carg08206 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029647.1	4.4e-171	100.00	RING-H2 finger protein ATL54, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
KAG6598705.1	9.2e-169	99.33	RING-H2 finger protein ATL54, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022962175.1	4.7e-165	97.65	RING-H2 finger protein ATL54-like [Cucurbita moschata]	[more]
XP_023546737.1	1.3e-159	93.96	RING-H2 finger protein ATL54-like [Cucurbita pepo subsp. pepo]	[more]
XP_022997232.1	1.8e-156	92.62	RING-H2 finger protein ATL54-like [Cucurbita maxima]	[more]

BLAST of Carg08206 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFY8	1.4e-42	42.11	RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2	[more]
Q9LX93	3.9e-37	49.12	E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 ...	[more]
Q7XLY8	2.3e-29	34.00	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q9SRQ8	8.2e-27	39.80	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
Q9LF64	1.5e-25	35.53	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]

BLAST of Carg08206 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HEB6	2.3e-165	97.65	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111462708...	[more]
A0A6J1K4G1	8.8e-157	92.62	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111492196 P...	[more]
A0A0A0LPJ4	3.9e-112	69.23	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_2G369190 PE...	[more]
A0A5A7VDK2	8.6e-112	69.64	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A1S3BAW8	8.6e-112	69.64	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103488086 PE=3 ...	[more]

BLAST of Carg08206 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72220.1	9.9e-44	42.11	RING/U-box superfamily protein	[more]
AT5G10380.1	2.8e-38	49.12	RING/U-box superfamily protein	[more]
AT4G33565.1	1.1e-31	41.67	RING/U-box superfamily protein	[more]
AT3G03550.1	5.8e-28	39.80	RING/U-box superfamily protein	[more]
AT5G17600.1	1.1e-26	35.53	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 155..196 e-value: 7.1E-7 score: 38.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 154..197 e-value: 4.0E-13 score: 49.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 155..197 score: 12.813844
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 130..203 e-value: 7.7E-21 score: 75.1
None	No IPR available	PANTHER	PTHR45676:SF121	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 8..266
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 154..197 e-value: 2.03365E-17 score: 72.3345
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 148..206
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 8..266

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08206-RA	Carg08206-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane