Carg08172 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08172
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	LEA_2 domain-containing protein
Location	Carg_Chr04: 2675470 .. 2677667 (+)
RNA-Seq Expression	Carg08172
Synteny	Carg08172

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGATGACGTCACGGCCTAATGTGAACTCCCGCAATAACCCCCTGCAACGTCCTCTTCCACCGCCACCGTCGAGAGTAAGAGCAGGACCAAGCAACAACAATCACCGTCCTCTTCCACCCCCACCGTCAAGAGCTCCTTTTAATGTCCAACACGACACTCACCGTTCTCCTCTTCCTTCAATGCCACCGTCCAGGCCGAATTCCGACTCTCAGAATGCTCGCTTTCCGTCTCCGCCCTCGTCGCCACCGTTATCTCGTCGGCAGCATTTTGGTTACGACACGACGTCGTCTTCCTCATCGGCTTCCTTCCGAGGCTGTTGCTGCTGCCTCTGCCTCCTCTTCTCCTTCATCGCTCTCCTCGCTCTCGCGATCGTCCTCGTCGTCGTTCTCGCCGTCAAGCCTAAGAAGCCTCAATTCGATCTCCAGCGAGTCGGTGTTCAATATATGGGGATAACCACTCCGAATCTCTTCTCCTTATCCTCCGCCGATTCACAGACCGTGACAACGCCGACGCCGACAACGACCTCCGCAGCGCTATCGCTCAACATTCGATTGCTGTTCACGGCAGTGAATCCAAACAAGGTCGGAATCAAATACGGGAATTCAAGGTTCACAGTGATGTACCGCGGGATTCCGCTAGGAAAAGCAATAGTGCCTGGATTTTACCAAGAGGCGCACAGCCAGAGAGAAGTGGAGGCAATGATCGCCGTCGATCGAGTGAATCTACTTCAGGCAGACGCCGCCGATTTGATCAGAGACGCGTCGTTGAACGATCGAGTGGAGCTGAGGGTTTTGGGCGAAGTTGGCGCCAGGATCCGCGTATTGGAGTTCGATTCTCCCGGCGTTCAGGTCAGTTCCTTTTTCTTCCCATTTCTCGTCTTCTTTTGCACGCATTTTCCTCCCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTAAGTTTTAAAATTATAATTTTAACATTTAGTCTATCAAATTTGTGCTTCCTATTTTTTTTTTTTTTAAAAGTATATTTTATATTTTATGATCCATAAATTAGTGGATTAAAAAAAACAAAAGTTAAAAGGCTAAATTACATAAATTAAATTAAACTGGTAAGGAGAGTTTATAATTAAACTTTTTAATATATTAATAGAAAAAATAAATGTGAGTTAGGAAGCCGCGCTAATAATAGTAGGGGGCAGTGTGTTTTAAGGATTTATTATTATTTATAAAAAAGCTTCAATTTATTAGTTTAATACTTTGAATTATCCATATAGAAATTTGTTATTTTAAAAAAGAAAAACATCCAACTTTTAATTAGCATAATAGACAAAATAAAAGAATAAAAAACAGAAGTACAAAACAATTAGCTAATCAAAATAATTCTCAATCCCAAAAAAAAAAATAATAATAATAAATAAATAGACAAGAATAATTGTGATTTTTTCTTTTAAATTCAATAATTTTTATTGTTGTATTTTTCAATATATATCTATATATGTATATATTTATTAATCATATTTACATTTTGTTTTTCTTCCGTAAAAAAAAAATTATTATTATTTGAAAAGAATAAAATTAAAATAAAAAAGTATTAAAAAGTCAAAGTGATAAAACATTGGGAAACCGCTTCCGAATAAAACGGTGCCGCTTAGTTGCTTTACGACAAAATGGTGGGGGCCACACCGACCGAATAAAACTGCTTTGTTTTTTCAACCCTTTCACATTTGGGAGTTTTTTTTATTTATTATTTTTTAATATTTATTTAACTTATTTACTTTATCCTTTTACTCATCATGTCTTGTCCCTATTTATCTACCTAATATAATAATAATAATATCACCTTTTTTTCCGTACCCATTGTGTTTAATTTTTTCTTTTTTTAGTCGAAGATTCAAATTCTCGTACTCTTTTTTAAATATAAGTATATTCCCATTTCACCATTGAATTGGGTCGAGGAATAATGAATATTTTTTCTTAAAGAAAATGTCAAGCTCAACTACTAGCCATTACTCAGTTTATGTTGTTGCATGATCAAGTTTTATCGTGTTAAGTTCATTATGTTCTTGTGATTCTGTACGAGTTTTTGTTTATGGTTGTGTAGTCAAATATTTTGAATGACGACAGGTGTCGGTGGATTGCTCGATAGTGATAAGTCCAAGGAATCAGTCGTTGACTTCGAAGCAATGTGGATTTGATGGGTTCAGCTTATGA

mRNA sequence

ATGGAGGAGATGACGTCACGGCCTAATGTGAACTCCCGCAATAACCCCCTGCAACGTCCTCTTCCACCGCCACCGTCGAGAGTAAGAGCAGGACCAAGCAACAACAATCACCGTCCTCTTCCACCCCCACCGTCAAGAGCTCCTTTTAATGTCCAACACGACACTCACCGTTCTCCTCTTCCTTCAATGCCACCGTCCAGGCCGAATTCCGACTCTCAGAATGCTCGCTTTCCGTCTCCGCCCTCGTCGCCACCGTTATCTCGTCGGCAGCATTTTGGTTACGACACGACGTCGTCTTCCTCATCGGCTTCCTTCCGAGGCTGTTGCTGCTGCCTCTGCCTCCTCTTCTCCTTCATCGCTCTCCTCGCTCTCGCGATCGTCCTCGTCGTCGTTCTCGCCGTCAAGCCTAAGAAGCCTCAATTCGATCTCCAGCGAGTCGGTGTTCAATATATGGGGATAACCACTCCGAATCTCTTCTCCTTATCCTCCGCCGATTCACAGACCGTGACAACGCCGACGCCGACAACGACCTCCGCAGCGCTATCGCTCAACATTCGATTGCTGTTCACGGCAGTGAATCCAAACAAGGTCGGAATCAAATACGGGAATTCAAGGTTCACAGTGATGTACCGCGGGATTCCGCTAGGAAAAGCAATAGTGCCTGGATTTTACCAAGAGGCGCACAGCCAGAGAGAAGTGGAGGCAATGATCGCCGTCGATCGAGTGAATCTACTTCAGGCAGACGCCGCCGATTTGATCAGAGACGCGTCGTTGAACGATCGAGTGGAGCTGAGGGTTTTGGGCGAAGTTGGCGCCAGGATCCGCGTATTGGAGTTCGATTCTCCCGGCGTTCAGGTGTCGGTGGATTGCTCGATAGTGATAAGTCCAAGGAATCAGTCGTTGACTTCGAAGCAATGTGGATTTGATGGGTTCAGCTTATGA

Coding sequence (CDS)

ATGGAGGAGATGACGTCACGGCCTAATGTGAACTCCCGCAATAACCCCCTGCAACGTCCTCTTCCACCGCCACCGTCGAGAGTAAGAGCAGGACCAAGCAACAACAATCACCGTCCTCTTCCACCCCCACCGTCAAGAGCTCCTTTTAATGTCCAACACGACACTCACCGTTCTCCTCTTCCTTCAATGCCACCGTCCAGGCCGAATTCCGACTCTCAGAATGCTCGCTTTCCGTCTCCGCCCTCGTCGCCACCGTTATCTCGTCGGCAGCATTTTGGTTACGACACGACGTCGTCTTCCTCATCGGCTTCCTTCCGAGGCTGTTGCTGCTGCCTCTGCCTCCTCTTCTCCTTCATCGCTCTCCTCGCTCTCGCGATCGTCCTCGTCGTCGTTCTCGCCGTCAAGCCTAAGAAGCCTCAATTCGATCTCCAGCGAGTCGGTGTTCAATATATGGGGATAACCACTCCGAATCTCTTCTCCTTATCCTCCGCCGATTCACAGACCGTGACAACGCCGACGCCGACAACGACCTCCGCAGCGCTATCGCTCAACATTCGATTGCTGTTCACGGCAGTGAATCCAAACAAGGTCGGAATCAAATACGGGAATTCAAGGTTCACAGTGATGTACCGCGGGATTCCGCTAGGAAAAGCAATAGTGCCTGGATTTTACCAAGAGGCGCACAGCCAGAGAGAAGTGGAGGCAATGATCGCCGTCGATCGAGTGAATCTACTTCAGGCAGACGCCGCCGATTTGATCAGAGACGCGTCGTTGAACGATCGAGTGGAGCTGAGGGTTTTGGGCGAAGTTGGCGCCAGGATCCGCGTATTGGAGTTCGATTCTCCCGGCGTTCAGGTGTCGGTGGATTGCTCGATAGTGATAAGTCCAAGGAATCAGTCGTTGACTTCGAAGCAATGTGGATTTGATGGGTTCAGCTTATGA

Protein sequence

MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSNNNHRPLPPPPSRAPFNVQHDTHRSPLPSMPPSRPNSDSQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIALLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAALSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL

Homology

[Close]

BLAST of Carg08172 vs. NCBI nr
Match: KAG6600338.1 (hypothetical protein SDJN03_05571, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030994.1 hypothetical protein SDJN02_05033, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 595.5 bits (1534), Expect = 2.6e-166
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSNNNHRPLPPPPSRAPFNVQHDTHRSPL 60
           MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSNNNHRPLPPPPSRAPFNVQHDTHRSPL
Sbjct: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSNNNHRPLPPPPSRAPFNVQHDTHRSPL 60

Query: 61  PSMPPSRPNSDSQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIA 120
           PSMPPSRPNSDSQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIA
Sbjct: 61  PSMPPSRPNSDSQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIA 120

Query: 121 LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAA 180
           LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAA
Sbjct: 121 LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAA 180

Query: 181 LSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD 240
           LSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD
Sbjct: 181 LSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD 240

Query: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS 300
           RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS
Sbjct: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS 300

Query: 301 LTSKQCGFDGFSL 314
           LTSKQCGFDGFSL
Sbjct: 301 LTSKQCGFDGFSL 313

[Close]

BLAST of Carg08172 vs. NCBI nr
Match: XP_022942979.1 (uncharacterized protein LOC111447854 [Cucurbita moschata] >XP_022942980.1 uncharacterized protein LOC111447854 [Cucurbita moschata] >XP_022942981.1 uncharacterized protein LOC111447854 [Cucurbita moschata] >XP_022942983.1 uncharacterized protein LOC111447854 [Cucurbita moschata] >XP_022942984.1 uncharacterized protein LOC111447854 [Cucurbita moschata])

HSP 1 Score: 594.0 bits (1530), Expect = 7.7e-166
Identity = 312/313 (99.68%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSNNNHRPLPPPPSRAPFNVQHDTHRSPL 60
           MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSNNNHRPLPPPPSRAPFNVQHDTHRSPL
Sbjct: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSNNNHRPLPPPPSRAPFNVQHDTHRSPL 60

Query: 61  PSMPPSRPNSDSQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIA 120
           PSMPPSRPNSDSQNARFPSPPSSPPLSR+QHFGYDTTSSSSSASFRGCCCCLCLLFSFIA
Sbjct: 61  PSMPPSRPNSDSQNARFPSPPSSPPLSRQQHFGYDTTSSSSSASFRGCCCCLCLLFSFIA 120

Query: 121 LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAA 180
           LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAA
Sbjct: 121 LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAA 180

Query: 181 LSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD 240
           LSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD
Sbjct: 181 LSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD 240

Query: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS 300
           RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS
Sbjct: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS 300

Query: 301 LTSKQCGFDGFSL 314
           LTSKQCGFDGFSL
Sbjct: 301 LTSKQCGFDGFSL 313

[Close]

BLAST of Carg08172 vs. NCBI nr
Match: XP_022981995.1 (proline-rich receptor-like protein kinase PERK10 [Cucurbita maxima] >XP_022982003.1 proline-rich receptor-like protein kinase PERK10 [Cucurbita maxima] >XP_022982009.1 proline-rich receptor-like protein kinase PERK10 [Cucurbita maxima] >XP_022982017.1 proline-rich receptor-like protein kinase PERK10 [Cucurbita maxima])

HSP 1 Score: 585.9 bits (1509), Expect = 2.1e-163
Identity = 308/313 (98.40%), Postives = 309/313 (98.72%), Query Frame = 0


Query: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSNNNHRPLPPPPSRAPFNVQHDTHRSPL 60
           MEEMTSRPNVNSRNNP QRPLPPPPSR RAGPSNNNHRPLPPPPSRAPFNVQHD H SPL
Sbjct: 1   MEEMTSRPNVNSRNNPPQRPLPPPPSRARAGPSNNNHRPLPPPPSRAPFNVQHDNHHSPL 60

Query: 61  PSMPPSRPNSDSQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIA 120
           PSMPPSRPNS+SQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIA
Sbjct: 61  PSMPPSRPNSESQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIA 120

Query: 121 LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAA 180
           LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAA
Sbjct: 121 LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAA 180

Query: 181 LSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD 240
           LSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD
Sbjct: 181 LSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD 240

Query: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS 300
           RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS
Sbjct: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS 300

Query: 301 LTSKQCGFDGFSL 314
           LTSKQCGFDGFSL
Sbjct: 301 LTSKQCGFDGFSL 313

[Close]

BLAST of Carg08172 vs. NCBI nr
Match: XP_023517250.1 (uncharacterized protein LOC111781071 [Cucurbita pepo subsp. pepo] >XP_023517259.1 uncharacterized protein LOC111781071 [Cucurbita pepo subsp. pepo] >XP_023517266.1 uncharacterized protein LOC111781071 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 582.4 bits (1500), Expect = 2.3e-162
Identity = 310/315 (98.41%), Postives = 311/315 (98.73%), Query Frame = 0


Query: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSNNNHRPLPPPPSRAPFNVQHDTHRSPL 60
           MEEMTSRPNVNSRNNPLQRPLPPPPSRVRA  SNNNHRPLPPPPSRAPFNVQHDTHRSPL
Sbjct: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAVASNNNHRPLPPPPSRAPFNVQHDTHRSPL 60

Query: 61  PSMPPSRPNSDSQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIA 120
           PSMPPSRPNS+SQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIA
Sbjct: 61  PSMPPSRPNSESQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIA 120

Query: 121 LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTP--TTTS 180
           LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTP  TTTS
Sbjct: 121 LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTTTS 180

Query: 181 AALSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIA 240
           AALSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIA
Sbjct: 181 AALSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIA 240

Query: 241 VDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRN 300
           VDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRN
Sbjct: 241 VDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRN 300

Query: 301 QSLTSKQCGFDGFSL 314
           QSLTSKQCGFDGFSL
Sbjct: 301 QSLTSKQCGFDGFSL 315

[Close]

BLAST of Carg08172 vs. NCBI nr
Match: XP_038880209.1 (proline-rich receptor-like protein kinase PERK10 [Benincasa hispida])

HSP 1 Score: 483.4 bits (1243), Expect = 1.5e-132
Identity = 271/322 (84.16%), Postives = 288/322 (89.44%), Query Frame = 0


Query: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSNNNHRPLPPPPSRAPFNVQHDTHRSPL 60
           MEEMTSRP+VN RN   QRPLPPPPS  R   ++N+HRPLPPPPSRAPFNV H+THRSP 
Sbjct: 1   MEEMTSRPHVNPRNT--QRPLPPPPS--RRADNDNHHRPLPPPPSRAPFNV-HNTHRSP- 60

Query: 61  PSMPPSRPNSDSQNARFPSP--PSSPPLSRRQHFGYDT--TSSSSSASFRGCCCCLCLLF 120
           P  PPSR NSD+ N R+PSP  P SPP SRRQHFGY T  +SSSSSASFRGCCCCLCLLF
Sbjct: 61  PPFPPSRSNSDAHNTRYPSPSSPPSPPTSRRQHFGYGTASSSSSSSASFRGCCCCLCLLF 120

Query: 121 SFIALLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQT-----VTT 180
           SFIALLALAIVLV++LAVKPKKPQFDLQRVGVQYMGIT PNLFSLSS+D++T      T+
Sbjct: 121 SFIALLALAIVLVILLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDAETAATTATTS 180

Query: 181 PTPTTTSAALSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQR 240
            T  TTSA+LSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQR
Sbjct: 181 ATTATTSASLSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQR 240

Query: 241 EVEAMIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCS 300
           EVEA IAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVL+FDSPGVQVSVDCS
Sbjct: 241 EVEATIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCS 300

Query: 301 IVISPRNQSLTSKQCGFDGFSL 314
           IVISPRNQSL+SKQCGFDGFSL
Sbjct: 301 IVISPRNQSLSSKQCGFDGFSL 316

[Close]

BLAST of Carg08172 vs. ExPASy TrEMBL
Match: A0A6J1FQG4 (uncharacterized protein LOC111447854 OS=Cucurbita moschata OX=3662 GN=LOC111447854 PE=4 SV=1)

HSP 1 Score: 594.0 bits (1530), Expect = 3.7e-166
Identity = 312/313 (99.68%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSNNNHRPLPPPPSRAPFNVQHDTHRSPL 60
           MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSNNNHRPLPPPPSRAPFNVQHDTHRSPL
Sbjct: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSNNNHRPLPPPPSRAPFNVQHDTHRSPL 60

Query: 61  PSMPPSRPNSDSQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIA 120
           PSMPPSRPNSDSQNARFPSPPSSPPLSR+QHFGYDTTSSSSSASFRGCCCCLCLLFSFIA
Sbjct: 61  PSMPPSRPNSDSQNARFPSPPSSPPLSRQQHFGYDTTSSSSSASFRGCCCCLCLLFSFIA 120

Query: 121 LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAA 180
           LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAA
Sbjct: 121 LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAA 180

Query: 181 LSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD 240
           LSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD
Sbjct: 181 LSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD 240

Query: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS 300
           RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS
Sbjct: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS 300

Query: 301 LTSKQCGFDGFSL 314
           LTSKQCGFDGFSL
Sbjct: 301 LTSKQCGFDGFSL 313

[Close]

BLAST of Carg08172 vs. ExPASy TrEMBL
Match: A0A6J1J1C4 (proline-rich receptor-like protein kinase PERK10 OS=Cucurbita maxima OX=3661 GN=LOC111480977 PE=4 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 1.0e-163
Identity = 308/313 (98.40%), Postives = 309/313 (98.72%), Query Frame = 0


Query: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSNNNHRPLPPPPSRAPFNVQHDTHRSPL 60
           MEEMTSRPNVNSRNNP QRPLPPPPSR RAGPSNNNHRPLPPPPSRAPFNVQHD H SPL
Sbjct: 1   MEEMTSRPNVNSRNNPPQRPLPPPPSRARAGPSNNNHRPLPPPPSRAPFNVQHDNHHSPL 60

Query: 61  PSMPPSRPNSDSQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIA 120
           PSMPPSRPNS+SQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIA
Sbjct: 61  PSMPPSRPNSESQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIA 120

Query: 121 LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAA 180
           LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAA
Sbjct: 121 LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAA 180

Query: 181 LSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD 240
           LSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD
Sbjct: 181 LSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD 240

Query: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS 300
           RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS
Sbjct: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS 300

Query: 301 LTSKQCGFDGFSL 314
           LTSKQCGFDGFSL
Sbjct: 301 LTSKQCGFDGFSL 313

[Close]

BLAST of Carg08172 vs. ExPASy TrEMBL
Match: A0A1S3C355 (proline-rich receptor-like protein kinase PERK10 OS=Cucumis melo OX=3656 GN=LOC103496146 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 7.1e-125
Identity = 255/313 (81.47%), Postives = 277/313 (88.50%), Query Frame = 0


Query: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSNNNHRPLPPPPSRAPFNVQHDTHRSPL 60
           MEEMTSRP +N R+   Q PLPPPPSR    P NN+HRPLPPPPSRAPFN+ H   RS  
Sbjct: 1   MEEMTSRPQLNPRST--QPPLPPPPSR---RPHNNHHRPLPPPPSRAPFNL-HSNPRS-- 60

Query: 61  PSMPPSRPNSDSQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIA 120
           P  P + PN +++N R+PSPP SPP SRRQHFGY   ++SSS SFRGCCCCLCLLFSFIA
Sbjct: 61  PPFPSTAPNPNTRNTRYPSPP-SPPSSRRQHFGYG--AASSSPSFRGCCCCLCLLFSFIA 120

Query: 121 LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAA 180
           LLA+AI+LV+VLAVKPKKPQFDLQRVGVQYMGIT PNLFSLSS+D++T    T +TTSA+
Sbjct: 121 LLAIAIILVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDAETAA--TTSTTSAS 180

Query: 181 LSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD 240
           LSLNIRLLFTAVNPNKVGIKYG+SRFTVMYRGIPLGKAIVPGFYQEAHS+REVEA IAVD
Sbjct: 181 LSLNIRLLFTAVNPNKVGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVD 240

Query: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS 300
           RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVL+FDSPGVQVSVDCSIVISPRNQS
Sbjct: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQS 300

Query: 301 LTSKQCGFDGFSL 314
           LTSKQCGFDGFSL
Sbjct: 301 LTSKQCGFDGFSL 300

[Close]

BLAST of Carg08172 vs. ExPASy TrEMBL
Match: A0A0A0L9B0 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G209460 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.7e-124
Identity = 254/313 (81.15%), Postives = 275/313 (87.86%), Query Frame = 0


Query: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSNNNHRPLPPPPSRAPFNVQHDTHRSPL 60
           MEEMTSRP +N RN   Q PLPPPPSR    P NN+  PLPPPPSRAPFN+Q +    P 
Sbjct: 1   MEEMTSRPQLNPRNT--QPPLPPPPSR---RPDNNHRPPLPPPPSRAPFNLQTNPRSPPF 60

Query: 61  PSMPPSRPNSDSQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIA 120
           PS   + PNS+++N R+PSPP SPP SRRQHFGY   ++SSS S RGCCCCLCLLFSFIA
Sbjct: 61  PS---TTPNSNTRNTRYPSPP-SPPSSRRQHFGYG--AASSSPSLRGCCCCLCLLFSFIA 120

Query: 121 LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAA 180
           LLA+AIVLV+VLAVKPKKPQFDLQRVGVQYMGIT PNLFSLSS+D++T    T +TTSA+
Sbjct: 121 LLAVAIVLVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDTETAA--TTSTTSAS 180

Query: 181 LSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD 240
           LSLNIRLLFTAVNPNKVGIKYG+SRFTVMYRGIPLGKAIVPGFYQEAHS+REVEA IAVD
Sbjct: 181 LSLNIRLLFTAVNPNKVGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVD 240

Query: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS 300
           RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVL+FDSPGVQVSVDCSIVISPRNQS
Sbjct: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQS 300

Query: 301 LTSKQCGFDGFSL 314
           LTSKQCGFDGFSL
Sbjct: 301 LTSKQCGFDGFSL 300

[Close]

BLAST of Carg08172 vs. ExPASy TrEMBL
Match: A0A5A7TAP5 (Proline-rich receptor-like protein kinase PERK10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1441G00290 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.7e-108
Identity = 227/286 (79.37%), Postives = 250/286 (87.41%), Query Frame = 0


Query: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSNNNHRPLPPPPSRAPFNVQHDTHRSPL 60
           MEEMTSRP +N R+   Q PLPPPPSR    P NN+HRPLPPPPSRAPFN+ H   RS  
Sbjct: 1   MEEMTSRPQLNPRST--QPPLPPPPSR---RPHNNHHRPLPPPPSRAPFNL-HSNPRS-- 60

Query: 61  PSMPPSRPNSDSQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIA 120
           P  P + PN +++N R+PSPP SPP SRRQHFGY   ++SSS SFRGCCCCLCLLFSFIA
Sbjct: 61  PPFPSTAPNPNTRNTRYPSPP-SPPSSRRQHFGYG--AASSSPSFRGCCCCLCLLFSFIA 120

Query: 121 LLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAA 180
           LLA+AI+LV+VLAVKPKKPQFDLQRVGVQYMGIT PNLFSLSS+D++T    T +TTSA+
Sbjct: 121 LLAIAIILVIVLAVKPKKPQFDLQRVGVQYMGITAPNLFSLSSSDAETAA--TTSTTSAS 180

Query: 181 LSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD 240
           LSLNIRLLFTAVNPNKVGIKYG+SRFTVMYRGIPLGKAIVPGFYQEAHS+REVEA IAVD
Sbjct: 181 LSLNIRLLFTAVNPNKVGIKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVD 240

Query: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQV 287
           RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVL+FDSPGVQ+
Sbjct: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLDFDSPGVQI 273

[Close]

BLAST of Carg08172 vs. TAIR 10
Match: AT2G01080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 283.5 bits (724), Expect = 2.1e-76
Identity = 157/244 (64.34%), Postives = 187/244 (76.64%), Query Frame = 0


Query: 78  PSPPSS--------PPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIALLALAIVLV 137
           P PPSS        P  ++ Q   Y + SSSSSAS +GCCCCL LLF+F+ALL LA+VL+
Sbjct: 2   PPPPSSSRAGLNGDPIAAQNQQPYYRSYSSSSSASLKGCCCCLFLLFAFLALLVLAVVLI 61

Query: 138 VVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAALSLNIRLLF 197
           V+LAVKPKKPQFDLQ+V V YMGI+ P+           V  P    T+A+LSL IR+LF
Sbjct: 62  VILAVKPKKPQFDLQQVAVVYMGISNPS----------AVLDP----TTASLSLTIRMLF 121

Query: 198 TAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVDRVNLLQADA 257
           TAVNPNKVGI+YG S FTVMY+G+PLG+A VPGFYQ+AHS + VEA I+VDRVNL+QA A
Sbjct: 122 TAVNPNKVGIRYGESSFTVMYKGMPLGRATVPGFYQDAHSTKNVEATISVDRVNLMQAHA 181

Query: 258 ADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQSLTSKQCGFD 314
           ADL+RDASLNDRVEL V G+VGA+IRV+ FDSPGVQVSV+C I ISPR Q+L  KQCGFD
Sbjct: 182 ADLVRDASLNDRVELTVRGDVGAKIRVMNFDSPGVQVSVNCGIGISPRKQALIYKQCGFD 231

[Close]

BLAST of Carg08172 vs. TAIR 10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 53.9 bits (128), Expect = 2.7e-07
Identity = 56/247 (22.67%), Postives = 100/247 (40.49%), Query Frame = 0


Query: 62  SMPPSRPNSDSQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIAL 121
           S+ P     + + A    PP  P  S  +    +T ++      R C  C+C     I L
Sbjct: 5   SIKPDDKKEEEKPATAMLPPPKPNASSMETQSANTGTAKKLRRKRNCKICICFTILLILL 64

Query: 122 LALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAAL 181
           +A+ IV++     KPK+P   +  V V  +  +                   P      L
Sbjct: 65  IAIVIVILAFTLFKPKRPTTTIDSVTVDRLQASV-----------------NPLLLKVLL 124

Query: 182 SLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVDR 241
           +L + +  +  NPN++G  Y +S   + YRG  +G+A +P     A     +   + +  
Sbjct: 125 NLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAARKTVPLNITLTLMA 184

Query: 242 VNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQSL 301
             LL      L+ D  +   + L    +V  ++ VL+     VQ S  C + IS  ++++
Sbjct: 185 DRLL--SETQLLSDV-MAGVIPLNTFVKVTGKVTVLKIFKIKVQSSSSCDLSISVSDRNV 231

Query: 302 TSKQCGF 309
           TS+ C +
Sbjct: 245 TSQHCKY 231

The following BLAST results are available for this feature:

BLAST of Carg08172 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600338.1	2.6e-166	100.00	hypothetical protein SDJN03_05571, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022942979.1	7.7e-166	99.68	uncharacterized protein LOC111447854 [Cucurbita moschata] >XP_022942980.1 unchar...	[more]
XP_022981995.1	2.1e-163	98.40	proline-rich receptor-like protein kinase PERK10 [Cucurbita maxima] >XP_02298200...	[more]
XP_023517250.1	2.3e-162	98.41	uncharacterized protein LOC111781071 [Cucurbita pepo subsp. pepo] >XP_023517259....	[more]
XP_038880209.1	1.5e-132	84.16	proline-rich receptor-like protein kinase PERK10 [Benincasa hispida]	[more]

BLAST of Carg08172 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg08172 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FQG4	3.7e-166	99.68	uncharacterized protein LOC111447854 OS=Cucurbita moschata OX=3662 GN=LOC1114478...	[more]
A0A6J1J1C4	1.0e-163	98.40	proline-rich receptor-like protein kinase PERK10 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A1S3C355	7.1e-125	81.47	proline-rich receptor-like protein kinase PERK10 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0L9B0	2.7e-124	81.15	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G209460 PE=4 ...	[more]
A0A5A7TAP5	2.7e-108	79.37	Proline-rich receptor-like protein kinase PERK10 OS=Cucumis melo var. makuwa OX=...	[more]

BLAST of Carg08172 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01080.1	2.1e-76	64.34	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G54200.1	2.7e-07	22.67	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.40.1820		coord: 135..289 e-value: 3.1E-5 score: 25.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	PANTHER	PTHR31234:SF8	EXPRESSED PROTEIN	coord: 75..311
None	No IPR available	PANTHER	PTHR31234	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 75..311
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 191..290 e-value: 2.4E-10 score: 40.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08172-RA	Carg08172-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016301	kinase activity