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Carg08165 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCAGAAAAACTAAACCCTAGCCAAACCCTTTTGTAGTCGGGGTCGTCTTGTTTCTGGGGAAGAATCCTGCGACTTGATCGTGTCTTCGAAGCAGCCATGAAGGTGTTCGAGATCAACGGAACCACCCTGACTCTCGCTCTCTTCACAGACGTTACCAATTCCAAGTACTCTCTCTCTCTGTCTCTCTATATGATTTCCTGAAACTGAAAATTTGGTCGACGGAGACTAGTGGGAGGATGATTAATCATTGTATAATTATATGGACTCGATATTTGATCTTTTTGTTTCTCTCTAACGTTTGGTTTTCGGTACATTCGCTAACTGTTTGAGAAAATGCTTGAACTAATCGAGGCAAGAAATGGGTGACAGCACCTTGTATTTAACTGTTGTGTTTTTAACATCACGTGTTCGAGTTTATTGGATAAATAATGTGGTATGCGGTTTCTTCAGTTTTTGAAGTGGCAGAGGCTTAAACGCAGGGATTGAACTGTAGTCTGTGTTTGATTTTAAAAGCTATCTGTGAAAATTATGGTGGTTTGAATATAAATTATGATTTATGGGTGCCATTACATATGTTCTTACGTGAAGTGTGTGTTTTTAAAGAATAAGCTACGTTATTAACAATTGAAGCGCCTCATAAAGTTGTTTATTTCCAGGGAGCTTCTTGATGCCATGCAAGCTGCAACTCTGGAACCGGAAGTTGCATTTCTCAATGCTTCTCTTGTATGGTTATTATATATGCTTATCTATTTTCCTGTAGCATATGATTATGAAATTCACCTCCACGCTCTCCATTCTTTTGTATGTTTTATGTTTTTGCTTTGAAATGTGCCCAAGAGTTCTCTAATATTTTCCTCATAAACAACTGAAGACAGATTCCCGATGTTTTCCCGGTGCTTGCGGCTGCTTATAAGACACTGATATCCAAGTCAAGGGATTCTTTGACTACCCGCACCCTTCATTCAGAACTCGTCTACAATTATTCGGGTTCAAAGCATGTAATTCTATCTAACCTCTTGGATACTGCAGCCGGTTGCTTATTTGTTTGTGGGTATGTTTGTGTGATCTTTTGATTTAATCATATGCAGATTACAGAGTCTTTAAAAAGATGTGGAATTTCTGATAGCTCCTCTTATGTCCTTGCTGCTCGTTTTAATGCTTCTCCCGACGAGGTTGGTTCAAGATGTCATGCTACTATACTCTGTTACCTTGTTGTAGACTTGTCATTATAAATTCTGAATTCTTGAAAAGCTCAATCTTTTTGTGTAATCTATTCTCCCATTCTAGACGAAGGCCATCGAGAAACTAGTGCACGGTGAAGAGATCAACTTAGAGGAATTGGGAGGGAGAGCAGACCAAGCTCTGATACAAAAGGTGCATTCCATGTCTTCTTGATATGCCAATTATGATTTTTTTCCTCCTTTGATAACTGAGTATTTAGGGCAACAAGCCATTACGTTATGCTCTTGGTTCACCTCCACTATTTTCTATGAAGCCTATGCTCGCTCCACTAGACCCTCAACATGATTTTTAAGTTACAAAGTTTTCTACTATACAACAAATTATGGGTTATTCCTTGCCAATAGCAAATGATTGTTCTTTTTTTCTTCAGCATTTTAAGATCACTGGACCCGAGTTGACAATATCCTCAGTTGGAGATGCCATAACATGTAGAATTGCTGCGCGGGATGCCTTGTAGCTGAAAATTTGCGACAAGTTCGTCTTTCGCTGTTAGTACACGAAGTTACTCCTTTACAGGTGAATGTAATAAATTGTTGACAGTAAAATTACTTTTAGGTTGATGATGTCTAAGCTGTTTTATAGAATGTTCAAATTGTTATGCTGTTGATGTCCGAGAACTGATTAATTCTCTGGCGCTTGGTAGCTATGCTGCCTCTTAGCCAATGAACGAGGGCCCTGAGCTCCTTTTTGCTTTTCATTGAACGCTTTTCACTCAATACAGCTCTTTTATGTTACGTAGTTCTATGGATTAATACCCCCTATCTTAGCTAATGAACGAGGGTCCTGAGTTTCTCTGAGCTTTTTTGTTGAGCCTTTCACTCAATACACAGTTGCTTAATCTTCATACAATATATTAGAAGGAAAATTGCAGATCCGAACATAGTTAAGTGGATAAAAACCCTTATCTTCGACAATGTTACGAAGGTCCTGAGTTTCTTTCCTGTTTGTCGGTCCCCGATTATAAGT CCAGAAAAACTAAACCCTAGCCAAACCCTTTTGTAGTCGGGGTCGTCTTGTTTCTGGGGAAGAATCCTGCGACTTGATCGTGTCTTCGAAGCAGCCATGAAGGTGTTCGAGATCAACGGAACCACCCTGACTCTCGCTCTCTTCACAGACGTTACCAATTCCAAGGAGCTTCTTGATGCCATGCAAGCTGCAACTCTGGAACCGGAAGTTGCATTTCTCAATGCTTCTCTTATTCCCGATGTTTTCCCGGTGCTTGCGGCTGCTTATAAGACACTGATATCCAAGTCAAGGGATTCTTTGACTACCCGCACCCTTCATTCAGAACTCGTCTACAATTATTCGGGTTCAAAGCATATTACAGAGTCTTTAAAAAGATGTGGAATTTCTGATAGCTCCTCTTATGTCCTTGCTGCTCGTTTTAATGCTTCTCCCGACGAGACGAAGGCCATCGAGAAACTAGTGCACGGTGAAGAGATCAACTTAGAGGAATTGGGAGGGAGAGCAGACCAAGCTCTGATACAAAAGCATTTTAAGATCACTGGACCCGAGTTGACAATATCCTCAGTTGGAGATGCCATAACATGTAGAATTGCTGCGCGGGATGCCTTGTAGCTGAAAATTTGCGACAAGTTCGTCTTTCGCTGTTAGTACACGAAGTTACTCCTTTACAGGTGAATGTAATAAATTGTTGACAGTAAAATTACTTTTAGGTTGATGATGTCTAAGCTGTTTTATAGAATGTTCAAATTGTTATGCTGTTGATGTCCGAGAACTGATTAATTCTCTGGCGCTTGGTAGCTATGCTGCCTCTTAGCCAATGAACGAGGGCCCTGAGCTCCTTTTTGCTTTTCATTGAACGCTTTTCACTCAATACAGCTCTTTTATGTTACGTAGTTCTATGGATTAATACCCCCTATCTTAGCTAATGAACGAGGGTCCTGAGTTTCTCTGAGCTTTTTTGTTGAGCCTTTCACTCAATACACAGTTGCTTAATCTTCATACAATATATTAGAAGGAAAATTGCAGATCCGAACATAGTTAAGTGGATAAAAACCCTTATCTTCGACAATGTTACGAAGGTCCTGAGTTTCTTTCCTGTTTGTCGGTCCCCGATTATAAGT ATGAAGGTGTTCGAGATCAACGGAACCACCCTGACTCTCGCTCTCTTCACAGACGTTACCAATTCCAAGGAGCTTCTTGATGCCATGCAAGCTGCAACTCTGGAACCGGAAGTTGCATTTCTCAATGCTTCTCTTATTCCCGATGTTTTCCCGGTGCTTGCGGCTGCTTATAAGACACTGATATCCAAGTCAAGGGATTCTTTGACTACCCGCACCCTTCATTCAGAACTCGTCTACAATTATTCGGGTTCAAAGCATATTACAGAGTCTTTAAAAAGATGTGGAATTTCTGATAGCTCCTCTTATGTCCTTGCTGCTCGTTTTAATGCTTCTCCCGACGAGACGAAGGCCATCGAGAAACTAGTGCACGGTGAAGAGATCAACTTAGAGGAATTGGGAGGGAGAGCAGACCAAGCTCTGATACAAAAGCATTTTAAGATCACTGGACCCGAGTTGACAATATCCTCAGTTGGAGATGCCATAACATGTAGAATTGCTGCGCGGGATGCCTTGTAG MKVFEINGTTLTLALFTDVTNSKELLDAMQAATLEPEVAFLNASLIPDVFPVLAAAYKTLISKSRDSLTTRTLHSELVYNYSGSKHITESLKRCGISDSSSYVLAARFNASPDETKAIEKLVHGEEINLEELGGRADQALIQKHFKITGPELTISSVGDAITCRIAARDAL Homology
BLAST of Carg08165 vs. NCBI nr
Match: XP_022941609.1 (EKC/KEOPS complex subunit Tprkb isoform X1 [Cucurbita moschata] >KAG7030987.1 EKC/KEOPS complex subunit Tprkb [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0
BLAST of Carg08165 vs. NCBI nr
Match: XP_023524844.1 (EKC/KEOPS complex subunit Tprkb isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 325.1 bits (832), Expect = 3.6e-85 Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 0
BLAST of Carg08165 vs. NCBI nr
Match: XP_022983047.1 (EKC/KEOPS complex subunit Tprkb [Cucurbita maxima]) HSP 1 Score: 320.9 bits (821), Expect = 6.9e-84 Identity = 167/171 (97.66%), Postives = 168/171 (98.25%), Query Frame = 0
BLAST of Carg08165 vs. NCBI nr
Match: KAG6600331.1 (EKC/KEOPS complex subunit TPRKB, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 309.7 bits (792), Expect = 1.6e-80 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Carg08165 vs. NCBI nr
Match: XP_038898952.1 (EKC/KEOPS complex subunit TPRKB [Benincasa hispida]) HSP 1 Score: 305.4 bits (781), Expect = 3.0e-79 Identity = 160/171 (93.57%), Postives = 164/171 (95.91%), Query Frame = 0
BLAST of Carg08165 vs. ExPASy Swiss-Prot
Match: F1QZ15 (EKC/KEOPS complex subunit TPRKB OS=Danio rerio OX=7955 GN=tprkb PE=2 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.9e-15 Identity = 56/163 (34.36%), Postives = 93/163 (57.06%), Query Frame = 0
BLAST of Carg08165 vs. ExPASy Swiss-Prot
Match: Q8QZZ7 (EKC/KEOPS complex subunit Tprkb OS=Mus musculus OX=10090 GN=Tprkb PE=1 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 6.6e-13 Identity = 48/163 (29.45%), Postives = 91/163 (55.83%), Query Frame = 0
BLAST of Carg08165 vs. ExPASy Swiss-Prot
Match: Q9Y3C4 (EKC/KEOPS complex subunit TPRKB OS=Homo sapiens OX=9606 GN=TPRKB PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.5e-12 Identity = 48/163 (29.45%), Postives = 90/163 (55.21%), Query Frame = 0
BLAST of Carg08165 vs. ExPASy Swiss-Prot
Match: Q6C7C9 (EKC/KEOPS complex subunit CGI121 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=CGI121 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 6.8e-10 Identity = 37/139 (26.62%), Postives = 79/139 (56.83%), Query Frame = 0
BLAST of Carg08165 vs. ExPASy Swiss-Prot
Match: Q0C9R3 (EKC/KEOPS complex subunit cgi121 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=cgi121 PE=3 SV=2) HSP 1 Score: 64.7 bits (156), Expect = 1.2e-09 Identity = 42/142 (29.58%), Postives = 77/142 (54.23%), Query Frame = 0
BLAST of Carg08165 vs. ExPASy TrEMBL
Match: A0A6J1FNX6 (EKC/KEOPS complex subunit Tprkb isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446917 PE=3 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 6.1e-86 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0
BLAST of Carg08165 vs. ExPASy TrEMBL
Match: A0A6J1IY73 (EKC/KEOPS complex subunit Tprkb OS=Cucurbita maxima OX=3661 GN=LOC111481707 PE=3 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 3.3e-84 Identity = 167/171 (97.66%), Postives = 168/171 (98.25%), Query Frame = 0
BLAST of Carg08165 vs. ExPASy TrEMBL
Match: A0A5D3DQY2 (EKC/KEOPS complex subunit Tprkb OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1441G00010 PE=3 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 2.3e-77 Identity = 155/171 (90.64%), Postives = 163/171 (95.32%), Query Frame = 0
BLAST of Carg08165 vs. ExPASy TrEMBL
Match: A0A1S3C2H5 (EKC/KEOPS complex subunit Tprkb OS=Cucumis melo OX=3656 GN=LOC103496157 PE=3 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 2.3e-77 Identity = 155/171 (90.64%), Postives = 163/171 (95.32%), Query Frame = 0
BLAST of Carg08165 vs. ExPASy TrEMBL
Match: A0A0A0LBY8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G207370 PE=3 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 4.4e-76 Identity = 153/171 (89.47%), Postives = 161/171 (94.15%), Query Frame = 0
BLAST of Carg08165 vs. TAIR 10
Match: AT4G34412.1 (CONTAINS InterPro DOMAIN/s: Kinase binding protein CGI-121 (InterPro:IPR013926); Has 275 Blast hits to 275 proteins in 139 species: Archae - 0; Bacteria - 5; Metazoa - 98; Fungi - 109; Plants - 42; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). ) HSP 1 Score: 229.9 bits (585), Expect = 1.5e-60 Identity = 121/172 (70.35%), Postives = 149/172 (86.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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