Carg08157 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCCATTTTCGTTAATCAAAGAGGATCCAGATCATGGGCCACACCGGAGGCGTTGCCGGTGTCCGGTGGGGTTCCGATACCATCCAACAAAAAAATGGTCAAATGCGATGCTTCTTTTCATTGCTCTCGTGGTCATAGCAGACATTATCTTTCTGGTTCGGCTTGATATTTCAAAAAATGTAGCCATGGTGTTGATTCATGGCCCGATTTGTTCTACCGCTTGCCGCCTTCCCGTGCACTGATCGGTGGAGTTGATGATTCGAATTCACGGGTATTCGACGGCGATCGGATTTCGGAATTGGGGAGATGTGAGGAGTGGTTGGAGAAAGAAGACGCCGTGACGTATTCTAGGGATTTCCGGAAGGAGCCTATATTGGTTTCTGGTTCTGATGAGGTTTGTTTCGTTTTTGGATTCCGTATCATGCTTTCAATTGTTGCTTATGTAATGAAATGTTCTCTGTTTTCGTGTTTTATTACAATGCACTGCATCAATACGTTATTTAATGTGCTGCATCGATGTAGAAATCCATGTAATGCTGCGCACATTTCGATATCATTTGATATGCAAATTTTCCGCTCCATGATCAGTTTTCGATGAGCTTTATTTCTTATGCGTGGAGAGAGATATGGTGTTTTGGTCTTCTATCAGGAGCTTAGATGTTAGTGCCAAGATAGTTCGTATAAAGCCGTCGATTTTAGGAAAATATCTTTTATAATTAGAAGATCAAATTGAAATTGTGGACGTCTACATTGAATAAATTAGTTTTCCTAAAATCATATGAAGATAGTTATGATTTTGATATTTTTAATTTAAGTCCAACTTTGTTAGCCAACTTAGAATTTACTGGACATCGGGCTATAGCCAGCAAGGAGGCTGAGCTCCGAAGGGGTGGACATGAGGCGATGTGCCAGCAAGGATACTGGCCTCGAAGGGGTGAATTTGGTGGGAGTCCCATGTCGATTGGAGAAAGGAACGAATGCCAGCGAGGACGCCGGGCCCCGAAGGGAGGTGGATTATGAGATCCCACATCGGTTGGGGAGAAGAACGAATCACCCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACATGTTTTAAAAATCTTGAGGGAAAGTCCAAAGACGACAATATCTACTAGCGATAGACTTGAGCCATTTCAGTTTGTGTCCAGATGGTTGGCCGGAATTGAACCTGAACGTGCAAAACCTGAAGTATGAGACTATGAACTGAGCTAAAGGGAGTTGCTGGCTAGCATTGGGAAAGGGCAAAATCTTTCTTTAGTTTATGGCTCTGGACAAAATGAAAACGAATAAGAATCCGATAACGAGATCCTTTCACATCCTCGTCCCCTCTTTGGAAGTTCCAACCATTTATATTTTACTTCTCTGGGTTGGAATGCCATTCATAAACATTTTACGCCTCTCATGATGCTTGCCTATGAACATTGTGAATCTCTTCATTCAACTCCTTGAAGGCTCTCGCTTCTCGAGGAAGATTGGTAACATTTGGTAAAATACCCTCCTTAAGCACATGTGATCGTCAAAAAACAATAGATTTTCAAGGACAAACGTGAGGATACTTTAAAATGACTTTCTTTGATATTTTAAATCACCCAAAAAAGTTATTTGTTCATCTTCTATTTGTTCGTTCATTGTGTTTGAAGGCCTCATGAAAATGAAAGGGAAATTTTGTTTATACCATGCATGAGTTATCTCCATCTTCCTGCTATTAATATACTAAAAGTTAAGAATTTATGTACAAACTTCGGGGTGACATCTAACCATATTCTTGTTGAGATTGATTTCTGGATGACTTGAAGCTCTAAAATTCTAATTTGCACATGTTTTGGCAGCAAAGAAAAAAAACATCTAAAGCCTTTTAGTTAATTGTTCTCCTGTAGGGGAGGAAATCTTGCGCTATAGGATCTGAATTTAAGGTCAATTCAAGTAGAGATTCCGATGCTGCGTTTGGTTTAGATCACCAGGGTGGAATGCCTTCAATTCTTCAATCCATGGTATCAACTCTATATTTTGCAGAGAACAATATTGTCCAGGCACGACGGTGGGTAAGAACAATCTCTTATCTTACCATTATGCTATTTGGAGTACAAAACTTCCCCTTCTTAGCAAGAACATGTTTAGTGCTTATTTTTAGTTTTTCATTTAACACCGAGGCAATAAAATATTTGGGCGTAAGTGTCATGTATGATTACAAAAACCATGCATGGTTTGCTTGTTTTTCCACAGTCAATCTGAATAAAATACCCAAAAAACTTCACTAGTAGAGGAAGACTGCCAGTTCCATTTGTCTATGCAGAAAACAAAGGGCTTAAAAGGAAGGCTGTCAGAAGAGCTATATGTTTTGGGTTGAGAAATTGGGGGGTTGTAAAGGTTTCGTGGGCTGTTATGCAAAGTTGGTTGCAATTGGATTATGGCGATTTGTTGAAAGTTAGTTGGGTGAGGTAGTCACTAAAGCCGAAAGGGAGAGGTGGGAAGGAGGAGGGTTAGTTAGAGAGAGGAATGTGAAAAGGAGTCCGAACCTTTGAAAGCTTGGGAACTAAGAAAACGAATCTTAGTTACAAGGAGATGTGGTTATAGTGCAAAATGGAAATGCAGGATGGTAGGAAGATCGAATTATATAGAAGATAAGCTAGAGTTGGATGAGGGAATGCAGAGGGCAAGTTATCCATGATGGAGAGAAACTTCAAGGTCCTCACGGAAGGGGTTCAATAGTTGGTATGAGTGCACAAATTGTAAGAGAACTATTATGGTAGAAGTCTATGTAGTCCCAAACTAGTCGTATACAAGAGTTTACCCATGAGGAGAAGAGTACAAGGAAGGTAAGGGAGGCGCTCTGTGAATGCATGTTTTGTAGGCTAGTGATCTGATGTATCGAGAGCATAGCGATTTAATCGCCTAGAGGCTAGGAAGCTTTAAAAGCTTGTTCAATTTTAAGGGGGAAACATTGATATGCTTTCTGTGGCTTCATGAATGGAAATCTATCAACAGTACAATATTGGCAGTCATGGACCATCTAAAGAAATATGGCAGCCATTTCTTCCTTTTTTCGACACTCTTTTACAGCTCTAATTGTAGCTGTGTTTGTTCAAGTGAAAAGTAAGATCCATATTATCCTCAGAATTCTCTAACATGGTCGTTGATGCTTTTCTGTAGGAATGGTTATAGTATAGTAATGACCACCAGTCTCTCATCAGATGTACCTTTTGGATACTTCTCCTGGGCCGAGTACGATATCATGGCTCCAGTGCAGGCAAAGAATGAGAGTGCCCTTGCAGCTGCTTTCATTTTTGCAGTTGGGTTGACACAGAGGCAAGCTTTATATACCTTACGATTTCAAGGGGATTCTGATCTCAGAAAACATGTGGAAGATAACCCATGTGACAAATTTGAAGCCATTTTCATATAG ATGGCGGCCATTTTCGTTAATCAAAGAGGATCCAGATCATGGGCCACACCGGAGGCGTTGCCGGTGTCCGGTGGGGTTCCGATACCATCCAACAAAAAAATGACATTATCTTTCTGGTTCGGCTTGATATTTCAAAAAATCCATGGTGTTGATTCATGGCCCGATTTGTTCTACCGCTTGCCGCCTTCCCGTGCACTGATCGGTGGAGTTGATGATTCGAATTCACGGGTATTCGACGGCGATCGGATTTCGGAATTGGGGAGATGTGAGGAGTGGTTGGAGAAAGAAGACGCCGTGACGTATTCTAGGGATTTCCGGAAGGAGCCTATATTGGTTTCTGGTTCTGATGAGGGGAGGAAATCTTGCGCTATAGGATCTGAATTTAAGGTCAATTCAAGTAGAGATTCCGATGCTGCGTTTGGTTTAGATCACCAGGGTGGAATGCCTTCAATTCTTCAATCCATGGTATCAACTCTATATTTTGCAGAGAACAATATTGTCCAGGCACGACGGTGGGGGGAAACATTGATATGCTTTCTGTGGCTTCATGAATGGAAATCTATCAACAGTACAATATTGGCAGTCATGGACCATCTAAAGAAATATGGCAGCCATTTCTTCCTTTTTTCGACACTCTTTTACAGCTCTAATTGTAGCTGTGTTTGTTCAAGTGAAAAGAATGGTTATAGTATAGTAATGACCACCAGTCTCTCATCAGATGTACCTTTTGGATACTTCTCCTGGGCCGAGTACGATATCATGGCTCCAGTGCAGGCAAAGAATGAGAGTGCCCTTGCAGCTGCTTTCATTTTTGCAGTTGGGTTGACACAGAGGCAAGCTTTATATACCTTACGATTTCAAGGGGATTCTGATCTCAGAAAACATGTGGAAGATAACCCATGTGACAAATTTGAAGCCATTTTCATATAG ATGGCGGCCATTTTCGTTAATCAAAGAGGATCCAGATCATGGGCCACACCGGAGGCGTTGCCGGTGTCCGGTGGGGTTCCGATACCATCCAACAAAAAAATGACATTATCTTTCTGGTTCGGCTTGATATTTCAAAAAATCCATGGTGTTGATTCATGGCCCGATTTGTTCTACCGCTTGCCGCCTTCCCGTGCACTGATCGGTGGAGTTGATGATTCGAATTCACGGGTATTCGACGGCGATCGGATTTCGGAATTGGGGAGATGTGAGGAGTGGTTGGAGAAAGAAGACGCCGTGACGTATTCTAGGGATTTCCGGAAGGAGCCTATATTGGTTTCTGGTTCTGATGAGGGGAGGAAATCTTGCGCTATAGGATCTGAATTTAAGGTCAATTCAAGTAGAGATTCCGATGCTGCGTTTGGTTTAGATCACCAGGGTGGAATGCCTTCAATTCTTCAATCCATGGTATCAACTCTATATTTTGCAGAGAACAATATTGTCCAGGCACGACGGTGGGGGGAAACATTGATATGCTTTCTGTGGCTTCATGAATGGAAATCTATCAACAGTACAATATTGGCAGTCATGGACCATCTAAAGAAATATGGCAGCCATTTCTTCCTTTTTTCGACACTCTTTTACAGCTCTAATTGTAGCTGTGTTTGTTCAAGTGAAAAGAATGGTTATAGTATAGTAATGACCACCAGTCTCTCATCAGATGTACCTTTTGGATACTTCTCCTGGGCCGAGTACGATATCATGGCTCCAGTGCAGGCAAAGAATGAGAGTGCCCTTGCAGCTGCTTTCATTTTTGCAGTTGGGTTGACACAGAGGCAAGCTTTATATACCTTACGATTTCAAGGGGATTCTGATCTCAGAAAACATGTGGAAGATAACCCATGTGACAAATTTGAAGCCATTTTCATATAG MAAIFVNQRGSRSWATPEALPVSGGVPIPSNKKMTLSFWFGLIFQKIHGVDSWPDLFYRLPPSRALIGGVDDSNSRVFDGDRISELGRCEEWLEKEDAVTYSRDFRKEPILVSGSDEGRKSCAIGSEFKVNSSRDSDAAFGLDHQGGMPSILQSMVSTLYFAENNIVQARRWGETLICFLWLHEWKSINSTILAVMDHLKKYGSHFFLFSTLFYSSNCSCVCSSEKNGYSIVMTTSLSSDVPFGYFSWAEYDIMAPVQAKNESALAAAFIFAVGLTQRQALYTLRFQGDSDLRKHVEDNPCDKFEAIFI Homology
BLAST of Carg08157 vs. NCBI nr
Match: KAG6600324.1 (Glycoprotein 3-alpha-L-fucosyltransferase A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 404.4 bits (1038), Expect = 8.5e-109 Identity = 212/262 (80.92%), Postives = 214/262 (81.68%), Query Frame = 0
BLAST of Carg08157 vs. NCBI nr
Match: XP_022149269.1 (glycoprotein 3-alpha-L-fucosyltransferase A isoform X1 [Momordica charantia]) HSP 1 Score: 312.4 bits (799), Expect = 4.4e-81 Identity = 171/293 (58.36%), Postives = 195/293 (66.55%), Query Frame = 0
BLAST of Carg08157 vs. NCBI nr
Match: XP_022149269.1 (glycoprotein 3-alpha-L-fucosyltransferase A isoform X1 [Momordica charantia]) HSP 1 Score: 69.7 bits (169), Expect = 5.0e-08 Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 0
HSP 2 Score: 296.6 bits (758), Expect = 2.5e-76 Identity = 163/287 (56.79%), Postives = 182/287 (63.41%), Query Frame = 0
BLAST of Carg08157 vs. NCBI nr
Match: XP_038905543.1 (glycoprotein 3-alpha-L-fucosyltransferase A-like isoform X1 [Benincasa hispida]) HSP 1 Score: 296.6 bits (758), Expect = 2.5e-76 Identity = 163/287 (56.79%), Postives = 182/287 (63.41%), Query Frame = 0
BLAST of Carg08157 vs. NCBI nr
Match: XP_022149271.1 (glycoprotein 3-alpha-L-fucosyltransferase A isoform X2 [Momordica charantia]) HSP 1 Score: 296.2 bits (757), Expect = 3.3e-76 Identity = 163/287 (56.79%), Postives = 181/287 (63.07%), Query Frame = 0
BLAST of Carg08157 vs. ExPASy Swiss-Prot
Match: Q9FX97 (Putative fucosyltransferase-like protein OS=Arabidopsis thaliana OX=3702 GN=FUT12 PE=2 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.1e-34 Identity = 113/329 (34.35%), Postives = 143/329 (43.47%), Query Frame = 0
BLAST of Carg08157 vs. ExPASy Swiss-Prot
Match: Q9LJK1 (Glycoprotein 3-alpha-L-fucosyltransferase A OS=Arabidopsis thaliana OX=3702 GN=FUT11 PE=1 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 2.5e-34 Identity = 84/187 (44.92%), Postives = 100/187 (53.48%), Query Frame = 0
HSP 2 Score: 61.2 bits (147), Expect = 2.3e-08 Identity = 24/54 (44.44%), Postives = 35/54 (64.81%), Query Frame = 0
BLAST of Carg08157 vs. ExPASy TrEMBL
Match: A0A6J1D6J6 (glycoprotein 3-alpha-L-fucosyltransferase A isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017732 PE=3 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 2.1e-81 Identity = 171/293 (58.36%), Postives = 195/293 (66.55%), Query Frame = 0
BLAST of Carg08157 vs. ExPASy TrEMBL
Match: A0A6J1D6J6 (glycoprotein 3-alpha-L-fucosyltransferase A isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017732 PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 2.4e-08 Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 0
HSP 2 Score: 296.2 bits (757), Expect = 1.6e-76 Identity = 163/287 (56.79%), Postives = 181/287 (63.07%), Query Frame = 0
BLAST of Carg08157 vs. ExPASy TrEMBL
Match: A0A6J1D7W2 (glycoprotein 3-alpha-L-fucosyltransferase A isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017732 PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 2.4e-08 Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 0
HSP 2 Score: 280.0 bits (715), Expect = 1.2e-71 Identity = 163/327 (49.85%), Postives = 194/327 (59.33%), Query Frame = 0
BLAST of Carg08157 vs. ExPASy TrEMBL
Match: A0A1S3C3S9 (glycoprotein 3-alpha-L-fucosyltransferase A-like OS=Cucumis melo OX=3656 GN=LOC103496162 PE=3 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71 Identity = 163/327 (49.85%), Postives = 194/327 (59.33%), Query Frame = 0
BLAST of Carg08157 vs. ExPASy TrEMBL
Match: A0A6J1J9C2 (glycoprotein 3-alpha-L-fucosyltransferase A-like OS=Cucurbita maxima OX=3661 GN=LOC111482907 PE=3 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 2.5e-69 Identity = 152/285 (53.33%), Postives = 175/285 (61.40%), Query Frame = 0
BLAST of Carg08157 vs. TAIR 10
Match: AT1G49710.1 (fucosyltransferase 12 ) HSP 1 Score: 148.7 bits (374), Expect = 7.9e-36 Identity = 113/329 (34.35%), Postives = 143/329 (43.47%), Query Frame = 0
HSP 2 Score: 61.2 bits (147), Expect = 1.7e-09 Identity = 25/54 (46.30%), Postives = 36/54 (66.67%), Query Frame = 0
BLAST of Carg08157 vs. TAIR 10
Match: AT3G19280.1 (fucosyltransferase 11 ) HSP 1 Score: 147.5 bits (371), Expect = 1.8e-35 Identity = 84/187 (44.92%), Postives = 100/187 (53.48%), Query Frame = 0
HSP 2 Score: 61.2 bits (147), Expect = 1.7e-09 Identity = 24/54 (44.44%), Postives = 35/54 (64.81%), Query Frame = 0
The following BLAST results are available for this feature:
Pages
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InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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