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Carg08149 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGCTATCCCGTTTCTTCTCGGGACAGTGCTGCTTGCTCATACGGAAGTCGGAACGGAAGCTAATTACAACCTAACTCTCCGATTCCGCTTTGATTTTCAACTTTTCCGGTTGTAATTCTCTTCCGTTCGGTAGATCAGCTATTGATTCTTCCAACTATTCTCTTCCCAGGCTACTGTGTTCGTTTTTTCCATTGGCGAAAACGCAGTTACTCGACGAACAGTAAGCAAAATGAGCTCCATCTCTCTGTCTTGTGCGCTTGCTCTTGCGCCGGCTTATCCTCACCACCTTCCTAACTCTCAGCGCCAGAAATTGTGTCGCCGGCCTCTGCCTTCGTCTAATTCTCTCACTAGGTTGCAGAGGTTTGAGATCTCCGACCGAAACTCCGCTGGACCTCCATTGCCTCTGGTTCTCGCTTCCGCTGGAGCTGGCATCCTCAACTCCTTTCCGGTTTGTCATTTCTTTCTCGCTTTCTTTTGGCTGTAGTTGTTCTATTATTCATTTCGAGGGAGGCGTGTTTGTCTCTAGGTTATGTACTGGAAATGAAACTTTAATTGACGGTTTAATGTAATTTAGCATAATGTAATGAACGGGATGTCATCCTCTGGAATTCCTTCACGTATCTTCGCCTAATTATGATCTGTATGTTCGTCCAATATGAACAACTATGAACATAACCGCAAAAATTTGATGCCATTTTGGCTGAGAAGTAATCGAGAGATTAAAACTTCTCCTTTATAACGATTCATCGAATCTCTTCGACTAAGCTTATGCTGCAAAATTTTAGAGTGGAACATGGAACTGAAGCCGACGCTCGTAAGTACTATTTACAATTATCAATCTCATCCTATTTTTGGCTCGATCTATGATATATGTTATGGTTATTTATAGTTATTCTTTTAGAGAGGAATAGTGTGGGGCAATAACTTGTCTATGGCTATTTTAGCCTCGGTTTTATTCTTCTGCTTACTGCTTGGCCGTCTGTATCTCGCTCTTATTTTATCATGATGATTTTCAGATACGAGGAACATATACGGTTGGTGATTTTATGACTAGAAAGGAGGATCTGTTTGTTGTTAAACCTACAACAACAGTTGATGAAGGTGCGGTTGATTTAGGGCTTTTATTTTAATTATTTTCATTATAATTGCTAATGATAACTGTTTAATTCAACTGCTTTTGTGGTCACAGCGTTAGAAACCCTTGTGGAAAAGAGAATAACTGGTTTTCCTGTTGTGGATGAAGATTGGAATTTGGTAGAGTTTTTCCTTCCATCTTTTTGTTCTATCTATGGTCGAAGTATTACCCTTAAGCCATGTCAGGAAGTTTAGTCCATTTATGTTAAGAGTGCACTTGATTTCAAGAATCCATACTGCTATTGAAGCTGATAACCTGCCTTACTTGGTCATAATAATTTGGTTTATATGATTTTAGTGCCTTTACATTAATTGCTTCCTGTGGCAGGTTGGGGTTGTCTCAGATTATGACTTGTTGGCACTTGATTCGATTTCAGGTATTTTAACTTCTGATTATCACCATTACTTGAGGAATTATTCTCGCGCATTTTTCTGTTGAAATTGGGTTTCTGTCCTTTTCAGTTTTAATTAAATTACTAGTACTTTATTCATCCTTCTTATATTGATTCCTAAATGTTGAAGTGCTTCATTCAAATTGTTTTTGTTGGGTGGACTAGTAACAAAGTTTTGTGGTTTGTATGTGATCAATTATGGTGTTTTTTGATAGTGTCATTCTCGTCTAGCTGTTACTTTTTTTATCATGTTATTTTCATCTAGCTGTAGGTTATCAATTATAGTGGCCACTTAATATCTTATAAGCTCTATATAAAACCAAATAAAGTACAATCTTACTGTTGTCTGGTAAGATTATTTGAGGTGCATGTAAATTGACATTAATGCTCACAACTTTTCTAAAAAGGTTCAGTCACAATTCGTCAATCATTTTCTTTGTACTTTATTGTAACCATCTATTCCATTGCTTATCTTACCCAATAATGTTTCACCCTTTTTTTTTGGAAATTAGGTGGCACTCAAAGTGATACTAATCTGTTTCCTGATGTGGACAGTTCGTGGAAAGTATGTAAGCAATGCCCTCATTTATCTTCAGGTTATTTGTTTTTGTTGTTATGGAGACATTTGATGTTAAAAAAAAATGCTTTGACTCAGAAACCCAATAAGTCCAACCAAACTGTCTGGGTTGGGTTTCTATTAGTTGAACCCAAATCATAAAAAAATTTCCTTTTTATATATTTTTTTTACTCATAAAAGTTACTGATTAATCTTTGGAGTATTTGCTTTCAATAAAATAAAATATGTCGTTTTCACTACTTTTTATTTTTACATTTCATTACAACTCATTTGTGGTTTAAAAACTGATGAGATTTTCTATATAATCTGATTGTAGCACTCTGCTGCTATTTTCGTTTGTAATGATCATGTAAGCAGCTCAAGTTCTTTACGGAACACCGATTTGCCGTGAACATGCTACAAGAAAACATATATACCTGCAAAATTATCTTTAGAACGTGATATGTATAGTTACTTGCATATTGTTATTGACATTATTTTGAGGAGAGTGCTTTAAAATTTAAGTAGCTATGTAGTCTCATAAATTAGCTCTCCCATCCCTTGTTAAGTAAAATCTTTTGAAGAAGAAAGAGTCACAGAAGTTAGCTCTGCCATTGACATCTCTTGATTAAGTAAAATTCTTTGGAGAAAGAAGAGTCGCAGAAATTAGCTCTGCCATTGACATATCTTGATTAAGTAAAATTCTTTGGAGAAAGAAGAGTCACAGAAATTAACTCTGCCATTGGCATCCCTTAATTAAGTAAATTTCTTTGGAGAAAGAACAGTCACATGATCATGACCATGAATTATGTGGAGTGGTGGTTCACCACCATTTGTTCATTGAAATGAAAAATAAATCTGTATGTTTGCTGAATATGGTGGCAGACGTTCAATGAGATACAGAAACTTCTCAGTAAAACAAATGGTAAAGTTATCGGCGACCTGATGACACCTGCTCCACTAGTTGTTCGTGAAACTTCAAATTTAGAAGATGCTGCCAGGTAATCTTTTTATATCTCTCTCTTCTGCATTATCTTTCAATCTGAATCTATATATTCCATGGCTTCTTCAATGTTTCGACCAAGATATTTAATCAATTTTAATTTTTAATTATATAATTTCATTTAATTAAACTTTTTATGTGCATTCTTCAAAAAAAAACAAAAAAAAAAACAAAAAACAAAAAAGACTATCTTTTCCATGTTACTCGGTGACTTTGTTTAATCATCATTTGTTCCTCACAACCGTGTGTGGGGGTTGAGTAAACTTCATTCTTTTTGTATTTTGTTTTATTTTGAACTTCCTCCATTATAAACCCAACCATGATCTTCGACTAAATTAACCAACGTGGGACTTACTCTATTGACATGGCTAAGTTTAGGGCATGACTCTAATACCATGTTAGAAATCACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCGTGGGTTTGCTTTGGGCTTCCCCCAAAATGCCTCGTACCAATGGAGATAATATTCCTCACTTATAAACCCACTATCTTCCACTGAATTAACCAATGTGGGACTCACTCCCAATAATCCTCCACAAATTCAAATGACACATTTTAGAGAAAAGACTGCATAATCAAGAGTTTACCCATTTTTACAAGTTAATCTGTGGCTACCGAAGTTTGAAACTATTGTTTTAACTAACTTGAATTTTCAATTGTTTAGGTTGTTGCTCGAAACAAAATATCGTCGATTGCCAGTAGTAAATGCAGATGGCAAGCTGGTAGTAATATTTCTTTTTCTTTTCCATTCTACTTTAAAAGTGTAATAACTTTTCAAGGCTCCCTCAGTCATGGCCGTCCATCTTATTTGTTTCTGTTTTCATGTTTCAGGTGGGCATCATTACTAGGGGAAATGTTGTTAGAGCAGCATTGCAGATAAAACGTGCTGCGGAAGGGTCGACATAATGCTAGAAACATTGGCTGGTGGCGCTCCGAGGTAAACATGTATCACAAAAGCTTAGCATTGTTTGTAGATCATGAATATAGTATCCTATAGTTTACACATGGTTGGGTTGTTCCTGAAGTTGTGGATTCCGTCCTCAAGCAAACTATAGCTTTAAAAATGGAAGTTCATTGATGCTCTAAGATTCTTCTTCCCAATCTCCCAACTACGAAATGTTGGTCCATGTCAATATTTGAGTATCCCCAGCATTTCAGGTCGACCCGCTATTAGATTTCATTATGAAGTTGGGTCATTTTTGTTGGAACCTCATTCTTTAGATTTCCCTGAACGTTTTGAATATGATCTGTGAGTATCTTTCTACTGCTGTAAATGTGAGATTCAATCAGGAGTTATGATAACGAGCTTAAGACTTGAACGAGAGTGTCTAGTACTTGGAATAGCCCGTATCATAGAACCTATTTTAGTTTCTGAATTTTCTTAGGTACTTGGAATATAGCCCGTATCACCGAATCTATTTTAGTTCGTGAACTTTTTTAGATTTTGTTTTAGGTTTTCTACTTCGAACGGATTTATCGAGTTAGAATTTGTATAAATTTAAAGCAAACCAAGTATTATAAGGGTAGGTAGGGTTGCTTGCTGGGTTAAGAAACAATGCAAATGCTGCATCATTGAGGATTATGAACTTTTTTTAAGGGAATATGAATATAAAATTGGTCATCACCATGGCGTGTGAAGTAAGGATTTTGCCCGTGTTTCAAACACATGTGACGTGAGACGAGAAAAAATGGGTACATAGTTGACTCTGACCTGGACTTTGAAACCTAAGTCGTCTCGAGTCATTGACGCATGCCACGTCACCCAAGTCGTCGGGAATCCAAGCCAAATGCAATCAACTTCTTTGACTCTTTCTTTGACTTTTATTTTCT CGCTATCCCGTTTCTTCTCGGGACAGTGCTGCTTGCTCATACGGAAGTCGGAACGGAAGCTAATTACAACCTAACTCTCCGATTCCGCTTTGATTTTCAACTTTTCCGGTTGTAATTCTCTTCCGTTCGGTAGATCAGCTATTGATTCTTCCAACTATTCTCTTCCCAGGCTACTGTGTTCGTTTTTTCCATTGGCGAAAACGCAGTTACTCGACGAACAGTAAGCAAAATGAGCTCCATCTCTCTGTCTTGTGCGCTTGCTCTTGCGCCGGCTTATCCTCACCACCTTCCTAACTCTCAGCGCCAGAAATTGTGTCGCCGGCCTCTGCCTTCGTCTAATTCTCTCACTAGGTTGCAGAGGTTTGAGATCTCCGACCGAAACTCCGCTGGACCTCCATTGCCTCTGGTTCTCGCTTCCGCTGGAGCTGGCATCCTCAACTCCTTTCCGATACGAGGAACATATACGGTTGGTGATTTTATGACTAGAAAGGAGGATCTGTTTGTTGTTAAACCTACAACAACAGTTGATGAAGCGTTAGAAACCCTTGTGGAAAAGAGAATAACTGGTTTTCCTGTTGTGGATGAAGATTGGAATTTGGTTGGGGTTGTCTCAGATTATGACTTGTTGGCACTTGATTCGATTTCAGGTGGCACTCAAAGTGATACTAATCTGTTTCCTGATGTGGACAGTTCGTGGAAAACGTTCAATGAGATACAGAAACTTCTCAGTAAAACAAATGGTAAAGTTATCGGCGACCTGATGACACCTGCTCCACTAGTTGTTCGTGAAACTTCAAATTTAGAAGATGCTGCCAGGTTGTTGCTCGAAACAAAATATCGTCGATTGCCAGTAGTAAATGCAGATGGCAAGCTGGTGGGCATCATTACTAGGGGAAATGTTGTTAGAGCAGCATTGCAGATAAAACGTGCTGCGGAAGGGTCGACATAATGCTAGAAACATTGGCTGGTGGCGCTCCGAGGTAAACATGTATCACAAAAGCTTAGCATTGTTTGTAGATCATGAATATAGTATCCTATAGTTTACACATGGTTGGGTTGTTCCTGAAGTTGTGGATTCCGTCCTCAAGCAAACTATAGCTTTAAAAATGGAAGTTCATTGATGCTCTAAGATTCTTCTTCCCAATCTCCCAACTACGAAATGTTGGTCCATGTCAATATTTGAGTATCCCCAGCATTTCAGGTCGACCCGCTATTAGATTTCATTATGAAGTTGGGTCATTTTTGTTGGAACCTCATTCTTTAGATTTCCCTGAACGTTTTGAATATGATCTGTGAGTATCTTTCTACTGCTGTAAATGTGAGATTCAATCAGGAGTTATGATAACGAGCTTAAGACTTGAACGAGAGTGTCTAGTACTTGGAATAGCCCGTATCATAGAACCTATTTTAGTTTCTGAATTTTCTTAGGTACTTGGAATATAGCCCGTATCACCGAATCTATTTTAGTTCGTGAACTTTTTTAGATTTTGTTTTAGGTTTTCTACTTCGAACGGATTTATCGAGTTAGAATTTGTATAAATTTAAAGCAAACCAAGTATTATAAGGGTAGGTAGGGTTGCTTGCTGGGTTAAGAAACAATGCAAATGCTGCATCATTGAGGATTATGAACTTTTTTTAAGGGAATATGAATATAAAATTGGTCATCACCATGGCGTGTGAAGTAAGGATTTTGCCCGTGTTTCAAACACATGTGACGTGAGACGAGAAAAAATGGGTACATAGTTGACTCTGACCTGGACTTTGAAACCTAAGTCGTCTCGAGTCATTGACGCATGCCACGTCACCCAAGTCGTCGGGAATCCAAGCCAAATGCAATCAACTTCTTTGACTCTTTCTTTGACTTTTATTTTCT ATGAGCTCCATCTCTCTGTCTTGTGCGCTTGCTCTTGCGCCGGCTTATCCTCACCACCTTCCTAACTCTCAGCGCCAGAAATTGTGTCGCCGGCCTCTGCCTTCGTCTAATTCTCTCACTAGGTTGCAGAGGTTTGAGATCTCCGACCGAAACTCCGCTGGACCTCCATTGCCTCTGGTTCTCGCTTCCGCTGGAGCTGGCATCCTCAACTCCTTTCCGATACGAGGAACATATACGGTTGGTGATTTTATGACTAGAAAGGAGGATCTGTTTGTTGTTAAACCTACAACAACAGTTGATGAAGCGTTAGAAACCCTTGTGGAAAAGAGAATAACTGGTTTTCCTGTTGTGGATGAAGATTGGAATTTGGTTGGGGTTGTCTCAGATTATGACTTGTTGGCACTTGATTCGATTTCAGGTGGCACTCAAAGTGATACTAATCTGTTTCCTGATGTGGACAGTTCGTGGAAAACGTTCAATGAGATACAGAAACTTCTCAGTAAAACAAATGGTAAAGTTATCGGCGACCTGATGACACCTGCTCCACTAGTTGTTCGTGAAACTTCAAATTTAGAAGATGCTGCCAGGTTGTTGCTCGAAACAAAATATCGTCGATTGCCAGTAGTAAATGCAGATGGCAAGCTGGTGGGCATCATTACTAGGGGAAATGTTGTTAGAGCAGCATTGCAGATAAAACGTGCTGCGGAAGGGTCGACATAA MSSISLSCALALAPAYPHHLPNSQRQKLCRRPLPSSNSLTRLQRFEISDRNSAGPPLPLVLASAGAGILNSFPIRGTYTVGDFMTRKEDLFVVKPTTTVDEALETLVEKRITGFPVVDEDWNLVGVVSDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNEIQKLLSKTNGKVIGDLMTPAPLVVRETSNLEDAARLLLETKYRRLPVVNADGKLVGIITRGNVVRAALQIKRAAEGST Homology
BLAST of Carg08149 vs. NCBI nr
Match: KAG7030973.1 (CBS domain-containing protein CBSX1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 464.5 bits (1194), Expect = 5.4e-127 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
BLAST of Carg08149 vs. NCBI nr
Match: KAG6600315.1 (CBS domain-containing protein CBSX1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 464.2 bits (1193), Expect = 7.0e-127 Identity = 238/239 (99.58%), Postives = 239/239 (100.00%), Query Frame = 0
BLAST of Carg08149 vs. NCBI nr
Match: XP_022982496.1 (CBS domain-containing protein CBSX1, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 462.6 bits (1189), Expect = 2.0e-126 Identity = 237/239 (99.16%), Postives = 239/239 (100.00%), Query Frame = 0
BLAST of Carg08149 vs. NCBI nr
Match: XP_023535982.1 (CBS domain-containing protein CBSX1, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 459.5 bits (1181), Expect = 1.7e-125 Identity = 237/239 (99.16%), Postives = 238/239 (99.58%), Query Frame = 0
BLAST of Carg08149 vs. NCBI nr
Match: XP_022943041.1 (CBS domain-containing protein CBSX1, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 450.7 bits (1158), Expect = 8.0e-123 Identity = 232/239 (97.07%), Postives = 234/239 (97.91%), Query Frame = 0
BLAST of Carg08149 vs. ExPASy Swiss-Prot
Match: O23193 (CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CBSX1 PE=1 SV=2) HSP 1 Score: 269.6 bits (688), Expect = 3.3e-71 Identity = 144/238 (60.50%), Postives = 179/238 (75.21%), Query Frame = 0
BLAST of Carg08149 vs. ExPASy Swiss-Prot
Match: Q9C5D0 (CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CBSX2 PE=1 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 1.7e-70 Identity = 142/212 (66.98%), Postives = 170/212 (80.19%), Query Frame = 0
BLAST of Carg08149 vs. ExPASy Swiss-Prot
Match: P42851 (Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) OX=186497 GN=guaB PE=3 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.5e-10 Identity = 42/138 (30.43%), Postives = 70/138 (50.72%), Query Frame = 0
BLAST of Carg08149 vs. ExPASy Swiss-Prot
Match: Q58821 (Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1426 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.3e-10 Identity = 46/170 (27.06%), Postives = 91/170 (53.53%), Query Frame = 0
BLAST of Carg08149 vs. ExPASy Swiss-Prot
Match: O58045 (Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=guaB PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 8.1e-09 Identity = 42/138 (30.43%), Postives = 68/138 (49.28%), Query Frame = 0
BLAST of Carg08149 vs. ExPASy TrEMBL
Match: A0A6J1IZH4 (CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111481297 PE=4 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 9.9e-127 Identity = 237/239 (99.16%), Postives = 239/239 (100.00%), Query Frame = 0
BLAST of Carg08149 vs. ExPASy TrEMBL
Match: A0A6J1FQM3 (CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111447897 PE=4 SV=1) HSP 1 Score: 450.7 bits (1158), Expect = 3.9e-123 Identity = 232/239 (97.07%), Postives = 234/239 (97.91%), Query Frame = 0
BLAST of Carg08149 vs. ExPASy TrEMBL
Match: A0A5A7T6Y9 (CBS domain-containing protein CBSX1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001350 PE=4 SV=1) HSP 1 Score: 397.1 bits (1019), Expect = 5.1e-107 Identity = 205/239 (85.77%), Postives = 222/239 (92.89%), Query Frame = 0
BLAST of Carg08149 vs. ExPASy TrEMBL
Match: A0A1S3C251 (CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103496172 PE=4 SV=1) HSP 1 Score: 397.1 bits (1019), Expect = 5.1e-107 Identity = 205/239 (85.77%), Postives = 222/239 (92.89%), Query Frame = 0
BLAST of Carg08149 vs. ExPASy TrEMBL
Match: A0A0A0L716 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G202220 PE=4 SV=1) HSP 1 Score: 393.3 bits (1009), Expect = 7.4e-106 Identity = 203/239 (84.94%), Postives = 220/239 (92.05%), Query Frame = 0
BLAST of Carg08149 vs. TAIR 10
Match: AT4G36910.1 (Cystathionine beta-synthase (CBS) family protein ) HSP 1 Score: 269.6 bits (688), Expect = 2.4e-72 Identity = 144/238 (60.50%), Postives = 179/238 (75.21%), Query Frame = 0
BLAST of Carg08149 vs. TAIR 10
Match: AT4G34120.1 (Cystathionine beta-synthase (CBS) family protein ) HSP 1 Score: 267.3 bits (682), Expect = 1.2e-71 Identity = 142/212 (66.98%), Postives = 170/212 (80.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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