Carg08114 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08114
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	B-like cyclin
Location	Carg_Chr04: 2344753 .. 2345755 (-)
RNA-Seq Expression	Carg08114
Synteny	Carg08114

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAGACACAAACACTCTCTCTCTCTCACTGAGTGCAGATTATTGACTATGTTCCATCTAAACCCATAAAGCTATGGCCTTCCCTCCCAACAATCCTACCGCCACTCTCCATCGCCGTTTTACCTTCCTCCTCCTTTCCAATGCCGTCGCCGTTTCTTTTCCGGTGATCTTTCTTCTCTTCAATGTCTCACTCTCCTCATCATTCTGCCGCTTCTTCCTCCGATGACTCTGCCATTTTCACCCTTCTTCAGTCGGAACTCGACCACATGCCTCGCCGTGACTACGTTCTCCGGTGTCGTGACCGGTCGATCGACGTCACCGCTCGCCATGACTCCATCAACTGGATCTTGAAGGTTTACTGCTAATCGTTACTTCATTAGCGTTCTTCGCATTGTTGTTCTTGTTTTTTAAAAGCGATTAGGGTTTCGCAGGTGCACGCTCACTACAATTTCAAACCGGTCACTGCGATTCTCTCGGTTAATTACTTCGATCGCTTCCTCTCCTCCAATTTCCTTCCGGTTAAGGATCTATTTCGATTTCCCCCTTGTTTTTGTCTCGATTGTTCAAGAATCGAATCGGAATTTTGAGGCTGATGATTTTAGGGCTTTGTTTTTTGCAGCGGCGGAATGGATGGCCGTTTCAGCTGCTATCGGTGGCGTGTTTGTCATTAGCAGCGAAAATGGAGGAGCCTCAGGTCCCATTGCTTTTGGACCTCCAAATTTTCGAGCCTCAATACGTCTTCGAGCCCAAAACGGTTCAGAGAATGGAGCTTTGGATCATGTCTATTCTCAATTGGAGATTACGCGCCGTCACGCCTTTCGATTTCCTCCACCACTACATCTCCAATCTTCCTTCTTCTTCCGCCGCAGACGGCGGCGATTGCGATAGTGACGGCGACGACTGCCATCTTCTCTTCTCAATTTCTTCCGATCTCATTCTTAGCACTACACGCGGTACTTACGACAAAAAAAAAAACCTAAAACCACTCTGTTATCATACTTAA

mRNA sequence

AAGAGACACAAACACTCTCTCTCTCTCACTGAGTGCAGATTATTGACTATGTTCCATCTAAACCCATAAAGCTATGGCCTTCCCTCCCAACAATCCTACCGCCACTCTCCATCGCCGTTTTACCTTCCTCCTCCTTTCCAATGCCGTCGCCGTTTCTTTTCCGGTGATCTTTCTTCTCTTCAATGTCTCACTCTCCTCATCATTCTGCCGCTTCTTCCTCCGATGACTCTGCCATTTTCACCCTTCTTCAGTCGGAACTCGACCACATGCCTCGCCGTGACTACGTTCTCCGGTGTCGTGACCGGTCGATCGACGTCACCGCTCGCCATGACTCCATCAACTGGATCTTGAAGGTGCACGCTCACTACAATTTCAAACCGGTCACTGCGATTCTCTCGGTTAATTACTTCGATCGCTTCCTCTCCTCCAATTTCCTTCCGCGGCGGAATGGATGGCCGTTTCAGCTGCTATCGGTGGCGTGTTTGTCATTAGCAGCGAAAATGGAGGAGCCTCAGGTCCCATTGCTTTTGGACCTCCAAATTTTCGAGCCTCAATACGTCTTCGAGCCCAAAACGGTTCAGAGAATGGAGCTTTGGATCATGTCTATTCTCAATTGGAGATTACGCGCCGTCACGCCTTTCGATTTCCTCCACCACTACATCTCCAATCTTCCTTCTTCTTCCGCCGCAGACGGCGGCGATTGCGATAGTGACGGCGACGACTGCCATCTTCTCTTCTCAATTTCTTCCGATCTCATTCTTAGCACTACACGCGGTACTTACGACAAAAAAAAAAACCTAAAACCACTCTGTTATCATACTTAA

Coding sequence (CDS)

ATGTCTCACTCTCCTCATCATTCTGCCGCTTCTTCCTCCGATGACTCTGCCATTTTCACCCTTCTTCAGTCGGAACTCGACCACATGCCTCGCCGTGACTACGTTCTCCGGTGTCGTGACCGGTCGATCGACGTCACCGCTCGCCATGACTCCATCAACTGGATCTTGAAGGTGCACGCTCACTACAATTTCAAACCGGTCACTGCGATTCTCTCGGTTAATTACTTCGATCGCTTCCTCTCCTCCAATTTCCTTCCGCGGCGGAATGGATGGCCGTTTCAGCTGCTATCGGTGGCGTGTTTGTCATTAGCAGCGAAAATGGAGGAGCCTCAGGTCCCATTGCTTTTGGACCTCCAAATTTTCGAGCCTCAATACGTCTTCGAGCCCAAAACGGTTCAGAGAATGGAGCTTTGGATCATGTCTATTCTCAATTGGAGATTACGCGCCGTCACGCCTTTCGATTTCCTCCACCACTACATCTCCAATCTTCCTTCTTCTTCCGCCGCAGACGGCGGCGATTGCGATAGTGACGGCGACGACTGCCATCTTCTCTTCTCAATTTCTTCCGATCTCATTCTTAGCACTACACGCGGTACTTACGACAAAAAAAAAAACCTAAAACCACTCTGTTATCATACTTAA

Protein sequence

MSHSPHHSAASSSDDSAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHHYISNLPSSSAADGGDCDSDGDDCHLLFSISSDLILSTTRGTYDKKKNLKPLCYHT

Homology

[Close]

BLAST of Carg08114 vs. NCBI nr
Match: KAG7030938.1 (Cyclin-D4-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 439.9 bits (1130), Expect = 1.3e-119
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MSHSPHHSAASSSDDSAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHA 60
           MSHSPHHSAASSSDDSAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHA
Sbjct: 1   MSHSPHHSAASSSDDSAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHA 60

Query: 61  HYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQI 120
           HYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQI
Sbjct: 61  HYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQI 120

Query: 121 FEPQYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHHYISNLPSSSAADGGDCDSDGDD 180
           FEPQYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHHYISNLPSSSAADGGDCDSDGDD
Sbjct: 121 FEPQYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHHYISNLPSSSAADGGDCDSDGDD 180

Query: 181 CHLLFSISSDLILSTTRGTYDKKKNLKPLCYHT 214
           CHLLFSISSDLILSTTRGTYDKKKNLKPLCYHT
Sbjct: 181 CHLLFSISSDLILSTTRGTYDKKKNLKPLCYHT 213

[Close]

BLAST of Carg08114 vs. NCBI nr
Match: XP_022941979.1 (cyclin-D2-2-like [Cucurbita moschata])

HSP 1 Score: 399.4 bits (1025), Expect = 1.9e-107
Identity = 195/197 (98.98%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 1   MSHSPHHSAASSSDDSAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHA 60
           MSHSPHHSAASSSDDSAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHA
Sbjct: 1   MSHSPHHSAASSSDDSAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHA 60

Query: 61  HYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQI 120
           HYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQI
Sbjct: 61  HYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQI 120

Query: 121 FEPQYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHHYISNLPSSSAADGGDCDSDGDD 180
           FEPQYVFEPKTVQRMELWIMSILNWRLRA+TPFDFLHHYISNLPSSSAADGGDCDSDGD 
Sbjct: 121 FEPQYVFEPKTVQRMELWIMSILNWRLRAITPFDFLHHYISNLPSSSAADGGDCDSDGDY 180

Query: 181 CHLLFSISSDLILSTTR 198
           CHLLFSISSDLILSTTR
Sbjct: 181 CHLLFSISSDLILSTTR 197

[Close]

BLAST of Carg08114 vs. NCBI nr
Match: KAG6600278.1 (Cyclin-D1-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 397.5 bits (1020), Expect = 7.2e-107
Identity = 195/197 (98.98%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 1   MSHSPHHSAASSSDDSAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHA 60
           MS SPHHSAASSSD+SAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHA
Sbjct: 1   MSLSPHHSAASSSDESAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHA 60

Query: 61  HYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQI 120
           HYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQI
Sbjct: 61  HYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQI 120

Query: 121 FEPQYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHHYISNLPSSSAADGGDCDSDGDD 180
           FEPQYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHHYISNLPSSSAADGGDCDSDGDD
Sbjct: 121 FEPQYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHHYISNLPSSSAADGGDCDSDGDD 180

Query: 181 CHLLFSISSDLILSTTR 198
           CHLLFSISSDLILSTTR
Sbjct: 181 CHLLFSISSDLILSTTR 197

[Close]

BLAST of Carg08114 vs. NCBI nr
Match: XP_022991967.1 (cyclin-D2-2-like [Cucurbita maxima])

HSP 1 Score: 388.3 bits (996), Expect = 4.4e-104
Identity = 190/197 (96.45%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MSHSPHHSAASSSDDSAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHA 60
           MS SP HSAASSSDDSAIF+LLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHA
Sbjct: 1   MSLSPRHSAASSSDDSAIFSLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHA 60

Query: 61  HYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQI 120
           HYNFKPVTA LSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQI
Sbjct: 61  HYNFKPVTASLSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQI 120

Query: 121 FEPQYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHHYISNLPSSSAADGGDCDSDGDD 180
           FEPQYVFEPKTVQRMELW+MSILNWRLRAVTPFDFLHH+IS+LPSSSAADGGDCDSDGDD
Sbjct: 121 FEPQYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFISDLPSSSAADGGDCDSDGDD 180

Query: 181 CHLLFSISSDLILSTTR 198
           CHLLFSISSDLILSTTR
Sbjct: 181 CHLLFSISSDLILSTTR 197

[Close]

BLAST of Carg08114 vs. NCBI nr
Match: XP_023524811.1 (cyclin-D2-2-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 387.1 bits (993), Expect = 9.7e-104
Identity = 190/197 (96.45%), Postives = 192/197 (97.46%), Query Frame = 0


Query: 1   MSHSPHHSAASSSDDSAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHA 60
           MS SPH SAASSSDDS IFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHA
Sbjct: 1   MSLSPHQSAASSSDDSVIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHA 60

Query: 61  HYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQI 120
           HYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQI
Sbjct: 61  HYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQI 120

Query: 121 FEPQYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHHYISNLPSSSAADGGDCDSDGDD 180
           FEPQYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHH+IS+ PSSSA DGGDCDSDGDD
Sbjct: 121 FEPQYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHHFISDQPSSSATDGGDCDSDGDD 180

Query: 181 CHLLFSISSDLILSTTR 198
           CHLLFSISSDLILSTTR
Sbjct: 181 CHLLFSISSDLILSTTR 197

[Close]

BLAST of Carg08114 vs. ExPASy Swiss-Prot
Match: Q6YXH8 (Cyclin-D4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-1 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-41
Identity = 93/189 (49.21%), Postives = 123/189 (65.08%), Query Frame = 0


Query: 15  DSAIFTLLQSELDHMPRRDYVLRCR----DRSIDVTARHDSINWILKVHAHYNFKPVTAI 74
           +  +  L+++E DHMPR DY  R R    D  +D+  R D+I+WI KVH++Y+F P+TA 
Sbjct: 66  EECVARLVETEADHMPREDYAERLRAGGGDGDLDLRVRMDAIDWIWKVHSYYSFAPLTAC 125

Query: 75  LSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVFEPK 134
           L+VNY DRFLS   LP    W  QLL+VACLSLAAKMEE  VP  LDLQ+ E +YVFE K
Sbjct: 126 LAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQVGEERYVFEAK 185

Query: 135 TVQRMELWIMSILNWRLRAVTPFDFLHHYISNLPSSSAADGGDCDSDGDDCHLLFSISSD 194
           T+QRMEL ++S L WR++AVTPF ++ +++  L      +GGD  S          +SS+
Sbjct: 186 TIQRMELLVLSTLKWRMQAVTPFSYVDYFLREL------NGGDPPSGRSAL-----LSSE 243

Query: 195 LILSTTRGT 200
           LIL   RGT
Sbjct: 246 LILCIARGT 243

[Close]

BLAST of Carg08114 vs. ExPASy Swiss-Prot
Match: P42751 (Cyclin-D1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD1-1 PE=1 SV=3)

HSP 1 Score: 169.5 bits (428), Expect = 4.2e-41
Identity = 82/159 (51.57%), Postives = 111/159 (69.81%), Query Frame = 0


Query: 8   SAASSSDDSAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPV 67
           S   S    +I   ++ E   +P  DY+ R + RS+D +AR DS+ WILKV A+YNF+P+
Sbjct: 42  SEVDSWPGDSIACFIEDERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPL 101

Query: 68  TAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVF 127
           TA L+VNY DRFL +  LP  +GWP QLL+VACLSLAAKMEE  VP L D Q+   +Y+F
Sbjct: 102 TAYLAVNYMDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLF 161

Query: 128 EPKTVQRMELWIMSILNWRLRAVTPFDFLHHYISNLPSS 167
           E KT++RMEL ++S+L+WRLR+VTPFDF+  +   +  S
Sbjct: 162 EAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKIDPS 200

[Close]

BLAST of Carg08114 vs. ExPASy Swiss-Prot
Match: Q0J233 (Cyclin-D2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD2-1 PE=3 SV=2)

HSP 1 Score: 163.7 bits (413), Expect = 2.3e-39
Identity = 89/184 (48.37%), Postives = 117/184 (63.59%), Query Frame = 0


Query: 16  SAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPVTAILSVNY 75
           ++I  L+  E ++ PR DY  R R RSID  AR +S++WILKV  +  F P+TA L+VNY
Sbjct: 50  ASIAELIGGEAEYSPRSDYPDRLRSRSIDPAARAESVSWILKVQEYNGFLPLTAYLAVNY 109

Query: 76  FDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVFEPKTVQRM 135
            DRFLS   LP   GW  QLL+VACLSLAAKMEE  VP LLDLQ+   +YVFEP+T+ RM
Sbjct: 110 MDRFLSLRHLPEGQGWAMQLLAVACLSLAAKMEETLVPSLLDLQVECSRYVFEPRTICRM 169

Query: 136 ELWIMSILNWRLRAVTPFDFLHHYISNLPSSSAADGGDCDSDGDDCHLLFSISSDLILST 195
           E  I++ LNWRLR+VTPF F+  +     S++     + D    D H   S+++  +L  
Sbjct: 170 EFLILTALNWRLRSVTPFTFIDFFACKHISNAMVQNANSDIQFLD-HCPSSMAAAAVLCA 229

Query: 196 TRGT 200
           T  T
Sbjct: 230 TGET 232

[Close]

BLAST of Carg08114 vs. ExPASy Swiss-Prot
Match: Q8LHA8 (Cyclin-D2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD2-2 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-37
Identity = 73/146 (50.00%), Postives = 104/146 (71.23%), Query Frame = 0


Query: 15  DSAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPVTAILSVN 74
           D  +  L++ E+DH P+R Y+ +     ++ + R D+I+WI KVH++YNF P++  L+VN
Sbjct: 62  DEFVALLVEKEMDHQPQRGYLEKLELGGLECSWRKDAIDWICKVHSYYNFGPLSLYLAVN 121

Query: 75  YFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVFEPKTVQR 134
           Y DRFLSS  LP    W  QLLSV+CLSLA KMEE  VPL +DLQ+F+ +YVFE + ++R
Sbjct: 122 YLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFDAEYVFEARHIKR 181

Query: 135 MELWIMSILNWRLRAVTPFDFLHHYI 161
           MEL +M  L WRL+AVTPF F+ +++
Sbjct: 182 MELIVMKTLKWRLQAVTPFSFIGYFL 207

[Close]

BLAST of Carg08114 vs. ExPASy Swiss-Prot
Match: Q4KYM5 (Cyclin-D4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-2 PE=2 SV=2)

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-37
Identity = 78/157 (49.68%), Postives = 108/157 (68.79%), Query Frame = 0


Query: 15  DSAIFTLLQSELDHMPRRDYVLRCR--DRSIDVTARHDSINWILKVHAHYNFKPVTAILS 74
           +  + +L++ E  HMPR DY  R R     +D+  R ++I WI +V+ +YNF  VTA L+
Sbjct: 75  EECVASLVEREQAHMPRADYGERLRGGGGDVDLRVRSEAIGWIWEVYTYYNFSSVTAYLA 134

Query: 75  VNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVFEPKTV 134
           VNY DRFLS   LP    W  QLLSVACLS+AAKMEE  VP  LDLQI EP+++FE +T+
Sbjct: 135 VNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKMEETVVPQCLDLQIGEPRFLFEVETI 194

Query: 135 QRMELWIMSILNWRLRAVTPFDFLHHYISNLPSSSAA 170
            RMEL +++ LNWR++AVTPF ++ +++  L S +AA
Sbjct: 195 HRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGNAA 231

[Close]

BLAST of Carg08114 vs. ExPASy TrEMBL
Match: A0A6J1FQ05 (B-like cyclin OS=Cucurbita moschata OX=3662 GN=LOC111447185 PE=3 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 9.2e-108
Identity = 195/197 (98.98%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 1   MSHSPHHSAASSSDDSAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHA 60
           MSHSPHHSAASSSDDSAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHA
Sbjct: 1   MSHSPHHSAASSSDDSAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHA 60

Query: 61  HYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQI 120
           HYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQI
Sbjct: 61  HYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQI 120

Query: 121 FEPQYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHHYISNLPSSSAADGGDCDSDGDD 180
           FEPQYVFEPKTVQRMELWIMSILNWRLRA+TPFDFLHHYISNLPSSSAADGGDCDSDGD 
Sbjct: 121 FEPQYVFEPKTVQRMELWIMSILNWRLRAITPFDFLHHYISNLPSSSAADGGDCDSDGDY 180

Query: 181 CHLLFSISSDLILSTTR 198
           CHLLFSISSDLILSTTR
Sbjct: 181 CHLLFSISSDLILSTTR 197

[Close]

BLAST of Carg08114 vs. ExPASy TrEMBL
Match: A0A6J1JNE1 (B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111488456 PE=3 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.1e-104
Identity = 190/197 (96.45%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MSHSPHHSAASSSDDSAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHA 60
           MS SP HSAASSSDDSAIF+LLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHA
Sbjct: 1   MSLSPRHSAASSSDDSAIFSLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHA 60

Query: 61  HYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQI 120
           HYNFKPVTA LSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQI
Sbjct: 61  HYNFKPVTASLSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQI 120

Query: 121 FEPQYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHHYISNLPSSSAADGGDCDSDGDD 180
           FEPQYVFEPKTVQRMELW+MSILNWRLRAVTPFDFLHH+IS+LPSSSAADGGDCDSDGDD
Sbjct: 121 FEPQYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFISDLPSSSAADGGDCDSDGDD 180

Query: 181 CHLLFSISSDLILSTTR 198
           CHLLFSISSDLILSTTR
Sbjct: 181 CHLLFSISSDLILSTTR 197

[Close]

BLAST of Carg08114 vs. ExPASy TrEMBL
Match: A0A6J1EA34 (B-like cyclin OS=Cucurbita moschata OX=3662 GN=LOC111430731 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 2.2e-85
Identity = 162/185 (87.57%), Postives = 172/185 (92.97%), Query Frame = 0


Query: 13  SDDSAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPVTAILS 72
           SDDSAIF+LLQSELDHMPRRDYV RCRDRSIDV AR DSINWILKVHAHYNFKPVTAILS
Sbjct: 36  SDDSAIFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSINWILKVHAHYNFKPVTAILS 95

Query: 73  VNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVFEPKTV 132
           VNYFDRFLS+NFLPRRNGWPFQLL+VACLSLAAKMEEP VPLLLDLQIFEP+YVF+PKTV
Sbjct: 96  VNYFDRFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTV 155

Query: 133 QRMELWIMSILNWRLRAVTPFDFLHHYISNLPSSSAADGGDCDSDGDDCHLLFSISSDLI 192
           QRMEL ++SILNWRLRAVTPFDFLHH+IS+LP SSAADGG+ D D   C LLFS SSDLI
Sbjct: 156 QRMELRVLSILNWRLRAVTPFDFLHHFISDLPPSSAADGGEGDGDVSRC-LLFSTSSDLI 215

Query: 193 LSTTR 198
           LSTTR
Sbjct: 216 LSTTR 219

[Close]

BLAST of Carg08114 vs. ExPASy TrEMBL
Match: A0A6J1JBE4 (B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111482925 PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.7e-83
Identity = 160/185 (86.49%), Postives = 170/185 (91.89%), Query Frame = 0


Query: 13  SDDSAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPVTAILS 72
           SDDSAIF+LLQSELDHMPRRDYV RCRDRSIDV AR DSINWILKVHAHYNFKPVTAILS
Sbjct: 36  SDDSAIFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSINWILKVHAHYNFKPVTAILS 95

Query: 73  VNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVFEPKTV 132
           VNYFDRFLS+NFLPRRNGW FQLL+VACLSLAAKMEEP VPLLLDLQIFEP+YVF+PKTV
Sbjct: 96  VNYFDRFLSANFLPRRNGWLFQLLAVACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTV 155

Query: 133 QRMELWIMSILNWRLRAVTPFDFLHHYISNLPSSSAADGGDCDSDGDDCHLLFSISSDLI 192
           QRMEL ++SILNWRLRAVTPFDFLHH+IS+L  SSAA GG+ D DG  C LLFS SSDLI
Sbjct: 156 QRMELRVLSILNWRLRAVTPFDFLHHFISDLLPSSAAYGGEVDGDGSRC-LLFSTSSDLI 215

Query: 193 LSTTR 198
           LSTTR
Sbjct: 216 LSTTR 219

[Close]

BLAST of Carg08114 vs. ExPASy TrEMBL
Match: E5GBG8 (B-like cyclin OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.9e-82
Identity = 160/186 (86.02%), Postives = 168/186 (90.32%), Query Frame = 0


Query: 13  SDDSAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPVTAILS 72
           SDDS I TLLQSEL HMPR DY+ RCRD SIDVTAR DSINWILKVH+HYNFKPVTAILS
Sbjct: 40  SDDSPISTLLQSELHHMPRIDYLRRCRDHSIDVTARQDSINWILKVHSHYNFKPVTAILS 99

Query: 73  VNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVFEPKTV 132
           VNYFDRFLSSN LPRRNGW FQLLSVACLSLAAKMEEP+VPLLLDLQIFEP+YVFEPKTV
Sbjct: 100 VNYFDRFLSSNILPRRNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTV 159

Query: 133 QRMELWIMSILNWRLRAVTPFDFLHHYISNLP-SSSAADGGDCDSDGDDCHLLFSISSDL 192
           QRMELW+MSILNWRLRAVTPFDFLHH+IS+LP SSSAA+ G  DS  DD H LFS SSDL
Sbjct: 160 QRMELWVMSILNWRLRAVTPFDFLHHFISDLPTSSSAAESGRGDS--DDSHRLFSSSSDL 219

Query: 193 ILSTTR 198
           ILSTTR
Sbjct: 220 ILSTTR 223

[Close]

BLAST of Carg08114 vs. TAIR 10
Match: AT1G70210.1 (CYCLIN D1;1 )

HSP 1 Score: 169.5 bits (428), Expect = 3.0e-42
Identity = 82/159 (51.57%), Postives = 111/159 (69.81%), Query Frame = 0


Query: 8   SAASSSDDSAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPV 67
           S   S    +I   ++ E   +P  DY+ R + RS+D +AR DS+ WILKV A+YNF+P+
Sbjct: 42  SEVDSWPGDSIACFIEDERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPL 101

Query: 68  TAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVF 127
           TA L+VNY DRFL +  LP  +GWP QLL+VACLSLAAKMEE  VP L D Q+   +Y+F
Sbjct: 102 TAYLAVNYMDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLF 161

Query: 128 EPKTVQRMELWIMSILNWRLRAVTPFDFLHHYISNLPSS 167
           E KT++RMEL ++S+L+WRLR+VTPFDF+  +   +  S
Sbjct: 162 EAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKIDPS 200

[Close]

BLAST of Carg08114 vs. TAIR 10
Match: AT5G65420.2 (CYCLIN D4;1 )

HSP 1 Score: 158.3 bits (399), Expect = 6.8e-39
Identity = 85/208 (40.87%), Postives = 127/208 (61.06%), Query Frame = 0


Query: 5   PHHSAASSSDDSAIFTLLQSELDHMPRRDYVLRCRDRSIDV-TARHDSINWILKVHAHYN 64
           P    + S  +  I  +++ E  H+P  DY+ R R   +D+   R D++NWI K    + 
Sbjct: 34  PQMGFSQSESEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQ 93

Query: 65  FKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEP 124
           F P+   L++NY DRFLS + LP   GW  QLL+VACLSLAAK+EE +VP+L+DLQ+ +P
Sbjct: 94  FGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDP 153

Query: 125 QYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHHYISNLPSSSAADGGDCDSDGDDCHL 184
           Q+VFE K+VQRMEL +++ L WRLRA+TP  ++ +++  +          CD   +  + 
Sbjct: 154 QFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKM--------SKCDQ--EPSNT 213

Query: 185 LFSISSDLILSTTRGTYDKKKNLKPLCY 212
           L S S  +I STT+G   +KK+L  + Y
Sbjct: 214 LISRSLQVIASTTKG---EKKSLSFMFY 228

[Close]

BLAST of Carg08114 vs. TAIR 10
Match: AT5G65420.1 (CYCLIN D4;1 )

HSP 1 Score: 156.0 bits (393), Expect = 3.4e-38
Identity = 81/195 (41.54%), Postives = 120/195 (61.54%), Query Frame = 0


Query: 5   PHHSAASSSDDSAIFTLLQSELDHMPRRDYVLRCRDRSIDV-TARHDSINWILKVHAHYN 64
           P    + S  +  I  +++ E  H+P  DY+ R R   +D+   R D++NWI K    + 
Sbjct: 34  PQMGFSQSESEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQ 93

Query: 65  FKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEP 124
           F P+   L++NY DRFLS + LP   GW  QLL+VACLSLAAK+EE +VP+L+DLQ+ +P
Sbjct: 94  FGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDP 153

Query: 125 QYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHHYISNLPSSSAADGGDCDSDGDDCHL 184
           Q+VFE K+VQRMEL +++ L WRLRA+TP  ++ +++  +          CD   +  + 
Sbjct: 154 QFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKM--------SKCDQ--EPSNT 213

Query: 185 LFSISSDLILSTTRG 199
           L S S  +I STT+G
Sbjct: 214 LISRSLQVIASTTKG 218

[Close]

BLAST of Carg08114 vs. TAIR 10
Match: AT2G22490.1 (Cyclin D2;1 )

HSP 1 Score: 154.5 bits (389), Expect = 9.9e-38
Identity = 72/156 (46.15%), Postives = 111/156 (71.15%), Query Frame = 0


Query: 8   SAASSSDDSAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPV 67
           S++SS  +  I  +L  E++  P  DYV R     +D++ R+ +++WILKV AHY+F  +
Sbjct: 57  SSSSSLSEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHFGHL 116

Query: 68  TAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVF 127
              LS+NY DRFL+S  LP+   W  QLL+V+CLSLA+KMEE  VP ++DLQ+ +P++VF
Sbjct: 117 CICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVF 176

Query: 128 EPKTVQRMELWIMSILNWRLRAVTPFDFLHHYISNL 164
           E KT++RMEL +++ LNWRL+A+TPF F+ +++  +
Sbjct: 177 EAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKI 212

[Close]

BLAST of Carg08114 vs. TAIR 10
Match: AT2G22490.2 (Cyclin D2;1 )

HSP 1 Score: 154.5 bits (389), Expect = 9.9e-38
Identity = 72/156 (46.15%), Postives = 111/156 (71.15%), Query Frame = 0


Query: 8   SAASSSDDSAIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPV 67
           S++SS  +  I  +L  E++  P  DYV R     +D++ R+ +++WILKV AHY+F  +
Sbjct: 57  SSSSSLSEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHFGHL 116

Query: 68  TAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVF 127
              LS+NY DRFL+S  LP+   W  QLL+V+CLSLA+KMEE  VP ++DLQ+ +P++VF
Sbjct: 117 CICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVF 176

Query: 128 EPKTVQRMELWIMSILNWRLRAVTPFDFLHHYISNL 164
           E KT++RMEL +++ LNWRL+A+TPF F+ +++  +
Sbjct: 177 EAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKI 212

The following BLAST results are available for this feature:

BLAST of Carg08114 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030938.1	1.3e-119	100.00	Cyclin-D4-1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022941979.1	1.9e-107	98.98	cyclin-D2-2-like [Cucurbita moschata]	[more]
KAG6600278.1	7.2e-107	98.98	Cyclin-D1-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022991967.1	4.4e-104	96.45	cyclin-D2-2-like [Cucurbita maxima]	[more]
XP_023524811.1	9.7e-104	96.45	cyclin-D2-2-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg08114 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6YXH8	1.1e-41	49.21	Cyclin-D4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-1 PE=2 SV=2	[more]
P42751	4.2e-41	51.57	Cyclin-D1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD1-1 PE=1 SV=3	[more]
Q0J233	2.3e-39	48.37	Cyclin-D2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD2-1 PE=3 SV=2	[more]
Q8LHA8	1.6e-37	50.00	Cyclin-D2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD2-2 PE=2 SV=1	[more]
Q4KYM5	1.6e-37	49.68	Cyclin-D4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-2 PE=2 SV=2	[more]

BLAST of Carg08114 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FQ05	9.2e-108	98.98	B-like cyclin OS=Cucurbita moschata OX=3662 GN=LOC111447185 PE=3 SV=1	[more]
A0A6J1JNE1	2.1e-104	96.45	B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111488456 PE=3 SV=1	[more]
A0A6J1EA34	2.2e-85	87.57	B-like cyclin OS=Cucurbita moschata OX=3662 GN=LOC111430731 PE=3 SV=1	[more]
A0A6J1JBE4	2.7e-83	86.49	B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111482925 PE=3 SV=1	[more]
E5GBG8	3.9e-82	86.02	B-like cyclin OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]

BLAST of Carg08114 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70210.1	3.0e-42	51.57	CYCLIN D1;1	[more]
AT5G65420.2	6.8e-39	40.87	CYCLIN D4;1	[more]
AT5G65420.1	3.4e-38	41.54	CYCLIN D4;1	[more]
AT2G22490.1	9.9e-38	46.15	Cyclin D2;1	[more]
AT2G22490.2	9.9e-38	46.15	Cyclin D2;1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013763	Cyclin-like	SMART	SM00385	cyclin_7	coord: 53..141 e-value: 6.6E-16 score: 68.9
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 48..137 e-value: 4.38108E-14 score: 63.4116
None	No IPR available	GENE3D	1.10.472.10		coord: 31..148 e-value: 6.5E-41 score: 142.0
None	No IPR available	GENE3D	1.10.472.10		coord: 20..168 e-value: 6.5E-41 score: 142.0
None	No IPR available	PANTHER	PTHR10177:SF378	CYCLIN-D2-1-LIKE	coord: 7..197
IPR006671	Cyclin, N-terminal	PFAM	PF00134	Cyclin_N	coord: 21..148 e-value: 2.5E-29 score: 101.6
IPR006671	Cyclin, N-terminal	PROSITE	PS00292	CYCLINS	coord: 48..79
IPR039361	Cyclin	PANTHER	PTHR10177	CYCLINS	coord: 7..197
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 13..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08114-RA	Carg08114-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0044772	mitotic cell cycle phase transition
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
cellular_component	GO:0000307	cyclin-dependent protein kinase holoenzyme complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity