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Carg08067 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAGAGCACTATAATTGGGCCGGCAAGTGAGTTAGGGTTTTTTTTCGTTCGACATTCGTATTACCGGAACCTCTGCTGCGGCCGATCGACGACGATGCGGAGACTTCCCTTCCCTCACCTCTCGTCTCTCTTCCGTTCGTCCTCTCTCTCTCATGGCTCTTCGTTCTCCTCTTGTCGCCTCTCCATTTCTCCATTTTTTGGCACTGATGCTCGTTCTCCCATGTCCTCTCTCCACTTTTCTCACGGATCGGAGATCTCTGGATCCGTTCAACTAGACAGGCAGGATTCAGGTGAATTTTATTTTTTTACTTGCTATCTGATTCGGGAAATTTCGATTATCGGGACTTATAATTTATGTTCTAAATGGGGTTTGGCGTTTTAGGTATAGGAATGGTTTGTTAAGTGATTAAGATGTTTCTTTCTGGATCTATTGATTTTAACGATTTAATGCATTTGCTTTTCACTAAAGAGAGATAAAGTTAAGGATGTCATTTTCTGGCGGAGTGAATTTTTCGGGTGTTTTCTTTTGCGGATCGCAGGCTGTGTGGACCTTCCACGTGGTGATTCTGTGAATGTTGGACGGGAGATTGTAGGACGTGCTTGGAAAGCCTTGGGAGCTCAAGGGCCTTGTTGGGGTTTGGCGCGTTCGAGTGAAAATGTCTCTGTTCCTTATTCTTCTAGCTCTAGATGTTATGTACACTACGATGGTCGGCCGAATGCTGATACAGGAAGGAACTTTAAGTCCATGAACTTCGTCAGGGGAATTTTAGAGGAAGATGGAATGGATTTTATGGGTAGTTCTCAGTTTCCTAGACCACCCAATATGGAGCACAATGCTGATATTGTCCATGTAAAGCTGATGCGTAACAATACATTTATCACTGTTACGGATAACAAAGGAAACACAAAGCTTAAGGCCTCTTCTGGCCGTCTTGAAGAACTGAAAGGAGGGCCTAAACTGTCCCGTTATGCTGCCGAAGCAACTGCAGAGTATGTTGGCCGTGAATCTAAAAAATTGGGGTTGAAATCAGTTGTGATGAGGGTGAAAGGCTTTACTTACTTTAAGAAGAAAAAACAAGCGATCTTGAGTTGGAGAGATGGTTTTACAGACTCTAAACGTGATCAAAATCCAATTGTTTACATTGAAGATACTACAAGACGTGCTCACAATGGTTGCAGACTTCCAAAGCAACGCCGTGTCTAGGTGTATGGGACTGGAATCTTGATGATGATGTCTTTTTATCTTTGTTGGAAAGTTTTCCTGGTTCAAATGGATGTAGCTCGCCCTCAAGTTCCTACTTGCCCTTTGCAATAATGATGACAATTGGATGTTTTTCTTTTCATATACATCAGTGTAAAATTTTCCAGGTTTAAATTGATGTAGGTTGCCTTCAAGTGTTCACTTACTGCAGTAACGATGACGACGGGATGTTTTTATATACACCAACATCAAATAAGTGTTTTCTTTTTATTCAAGTTCAACGACACGTGAGATTGAAAGATTCGAAACAGCCTCTTGATATATGCCTCATCTGTTTGGACTTCATTTGAGATATGCAATATCAACTTTCTCCTTGCAGTTGTGCACCACAAAAAATTCTTGTGGCCCGTGTTCAATCTTTTTACGTGGCTATAGTTTATTTCCTGTTGTGGATTATACATTTCTCTGATCTTACTTCTATCTCTTGACTCATAGCCTGGAATGCTTGTTTTACCTTTAGCATGATAGATATTGGTCTCTAATTGTGACCAGATTGCGCCTACCTCATGAAAAGACAAGGGAAAGTAGCTGGTTTGACTACAGGACAGAGAGAGCTATTACAGTGATTTGATCAACATTTTTGTGTGCTGAATTTCTTATGAAAATTTGCAGGCTTTTTGATCATTGATGGTGGATTTATATTATGTATCTGGTCCCTCAGCATGGATGAGCCATGGGC AAAAAAAGAGCACTATAATTGGGCCGGCAAGTGAGTTAGGGTTTTTTTTCGTTCGACATTCGTATTACCGGAACCTCTGCTGCGGCCGATCGACGACGATGCGGAGACTTCCCTTCCCTCACCTCTCGTCTCTCTTCCGTTCGTCCTCTCTCTCTCATGGCTCTTCGTTCTCCTCTTGTCGCCTCTCCATTTCTCCATTTTTTGGCACTGATGCTCGTTCTCCCATGTCCTCTCTCCACTTTTCTCACGGATCGGAGATCTCTGGATCCGTTCAACTAGACAGGCAGGATTCAGGCTGTGTGGACCTTCCACGTGGTGATTCTGTGAATGTTGGACGGGAGATTGTAGGACGTGCTTGGAAAGCCTTGGGAGCTCAAGGGCCTTGTTGGGGTTTGGCGCGTTCGAGTGAAAATGTCTCTGTTCCTTATTCTTCTAGCTCTAGATGTTATGTACACTACGATGGTCGGCCGAATGCTGATACAGGAAGGAACTTTAAGTCCATGAACTTCGTCAGGGGAATTTTAGAGGAAGATGGAATGGATTTTATGGGTAGTTCTCAGTTTCCTAGACCACCCAATATGGAGCACAATGCTGATATTGTCCATGTAAAGCTGATGCGTAACAATACATTTATCACTGTTACGGATAACAAAGGAAACACAAAGCTTAAGGCCTCTTCTGGCCGTCTTGAAGAACTGAAAGGAGGGCCTAAACTGTCCCGTTATGCTGCCGAAGCAACTGCAGAGTATGTTGGCCGTGAATCTAAAAAATTGGGGTTGAAATCAGTTGTGATGAGGGTGAAAGGCTTTACTTACTTTAAGAAGAAAAAACAAGCGATCTTGAGTTGGAGAGATGGTTTTACAGACTCTAAACGTGATCAAAATCCAATTGTTTACATTGAAGATACTACAAGACGTGCTCACAATGGTTGCAGACTTCCAAAGCAACGCCGTGTCTAGGTGTATGGGACTGGAATCTTGATGATGATGTCTTTTTATCTTTGTTGGAAAGTTTTCCTGGTTCAAATGGATGTAGCTCGCCCTCAAGTTCCTACTTGCCCTTTGCAATAATGATGACAATTGGATGTTTTTCTTTTCATATACATCAGTGTAAAATTTTCCAGGTTTAAATTGATGTAGGTTGCCTTCAAGTGTTCACTTACTGCAGTAACGATGACGACGGGATGTTTTTATATACACCAACATCAAATAAGTGTTTTCTTTTTATTCAAGTTCAACGACACGTGAGATTGAAAGATTCGAAACAGCCTCTTGATATATGCCTCATCTGTTTGGACTTCATTTGAGATATGCAATATCAACTTTCTCCTTGCAGTTGTGCACCACAAAAAATTCTTGTGGCCCGTGTTCAATCTTTTTACGTGGCTATAGTTTATTTCCTGTTGTGGATTATACATTTCTCTGATCTTACTTCTATCTCTTGACTCATAGCCTGGAATGCTTGTTTTACCTTTAGCATGATAGATATTGGTCTCTAATTGTGACCAGATTGCGCCTACCTCATGAAAAGACAAGGGAAAGTAGCTGGTTTGACTACAGGACAGAGAGAGCTATTACAGTGATTTGATCAACATTTTTGTGTGCTGAATTTCTTATGAAAATTTGCAGGCTTTTTGATCATTGATGGTGGATTTATATTATGTATCTGGTCCCTCAGCATGGATGAGCCATGGGC ATGCGGAGACTTCCCTTCCCTCACCTCTCGTCTCTCTTCCGTTCGTCCTCTCTCTCTCATGGCTCTTCGTTCTCCTCTTGTCGCCTCTCCATTTCTCCATTTTTTGGCACTGATGCTCGTTCTCCCATGTCCTCTCTCCACTTTTCTCACGGATCGGAGATCTCTGGATCCGTTCAACTAGACAGGCAGGATTCAGGCTGTGTGGACCTTCCACGTGGTGATTCTGTGAATGTTGGACGGGAGATTGTAGGACGTGCTTGGAAAGCCTTGGGAGCTCAAGGGCCTTGTTGGGGTTTGGCGCGTTCGAGTGAAAATGTCTCTGTTCCTTATTCTTCTAGCTCTAGATGTTATGTACACTACGATGGTCGGCCGAATGCTGATACAGGAAGGAACTTTAAGTCCATGAACTTCGTCAGGGGAATTTTAGAGGAAGATGGAATGGATTTTATGGGTAGTTCTCAGTTTCCTAGACCACCCAATATGGAGCACAATGCTGATATTGTCCATGTAAAGCTGATGCGTAACAATACATTTATCACTGTTACGGATAACAAAGGAAACACAAAGCTTAAGGCCTCTTCTGGCCGTCTTGAAGAACTGAAAGGAGGGCCTAAACTGTCCCGTTATGCTGCCGAAGCAACTGCAGAGTATGTTGGCCGTGAATCTAAAAAATTGGGGTTGAAATCAGTTGTGATGAGGGTGAAAGGCTTTACTTACTTTAAGAAGAAAAAACAAGCGATCTTGAGTTGGAGAGATGGTTTTACAGACTCTAAACGTGATCAAAATCCAATTGTTTACATTGAAGATACTACAAGACGTGCTCACAATGGTTGCAGACTTCCAAAGCAACGCCGTGTCTAG MRRLPFPHLSSLFRSSSLSHGSSFSSCRLSISPFFGTDARSPMSSLHFSHGSEISGSVQLDRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHYDGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV Homology
BLAST of Carg08067 vs. NCBI nr
Match: KAG7030891.1 (putative ribosomal protein S11, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 575.5 bits (1482), Expect = 2.6e-160 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0
BLAST of Carg08067 vs. NCBI nr
Match: XP_022942058.1 (probable ribosomal protein S11, mitochondrial [Cucurbita moschata]) HSP 1 Score: 569.7 bits (1467), Expect = 1.4e-158 Identity = 284/286 (99.30%), Postives = 285/286 (99.65%), Query Frame = 0
BLAST of Carg08067 vs. NCBI nr
Match: XP_023526167.1 (probable ribosomal protein S11, mitochondrial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 555.8 bits (1431), Expect = 2.1e-154 Identity = 279/286 (97.55%), Postives = 280/286 (97.90%), Query Frame = 0
BLAST of Carg08067 vs. NCBI nr
Match: XP_022999735.1 (probable ribosomal protein S11, mitochondrial [Cucurbita maxima]) HSP 1 Score: 548.9 bits (1413), Expect = 2.6e-152 Identity = 272/286 (95.10%), Postives = 279/286 (97.55%), Query Frame = 0
BLAST of Carg08067 vs. NCBI nr
Match: KAG6600233.1 (putative ribosomal protein S11, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 496.1 bits (1276), Expect = 2.0e-136 Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0
BLAST of Carg08067 vs. ExPASy Swiss-Prot
Match: Q8VZT8 (Probable ribosomal protein S11, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD3 PE=1 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 2.7e-51 Identity = 95/164 (57.93%), Postives = 132/164 (80.49%), Query Frame = 0
BLAST of Carg08067 vs. ExPASy Swiss-Prot
Match: P26870 (Ribosomal protein S11, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS11 PE=3 SV=2) HSP 1 Score: 73.6 bits (179), Expect = 4.2e-12 Identity = 51/127 (40.16%), Postives = 67/127 (52.76%), Query Frame = 0
BLAST of Carg08067 vs. ExPASy Swiss-Prot
Match: P46746 (Ribosomal protein S11, mitochondrial OS=Prototheca wickerhamii OX=3111 GN=RPS11 PE=3 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 3.5e-11 Identity = 44/126 (34.92%), Postives = 69/126 (54.76%), Query Frame = 0
BLAST of Carg08067 vs. ExPASy Swiss-Prot
Match: Q0BYD7 (30S ribosomal protein S11 OS=Hyphomonas neptunium (strain ATCC 15444) OX=228405 GN=rpsK PE=3 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 7.9e-11 Identity = 48/120 (40.00%), Postives = 67/120 (55.83%), Query Frame = 0
BLAST of Carg08067 vs. ExPASy Swiss-Prot
Match: A8ETK4 (30S ribosomal protein S11 OS=Arcobacter butzleri (strain RM4018) OX=367737 GN=rpsK PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 6.7e-10 Identity = 42/120 (35.00%), Postives = 65/120 (54.17%), Query Frame = 0
BLAST of Carg08067 vs. ExPASy TrEMBL
Match: A0A6J1FTT5 (probable ribosomal protein S11, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111447246 PE=3 SV=1) HSP 1 Score: 569.7 bits (1467), Expect = 6.9e-159 Identity = 284/286 (99.30%), Postives = 285/286 (99.65%), Query Frame = 0
BLAST of Carg08067 vs. ExPASy TrEMBL
Match: A0A6J1KGF8 (probable ribosomal protein S11, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111493991 PE=3 SV=1) HSP 1 Score: 548.9 bits (1413), Expect = 1.3e-152 Identity = 272/286 (95.10%), Postives = 279/286 (97.55%), Query Frame = 0
BLAST of Carg08067 vs. ExPASy TrEMBL
Match: A0A6J1CJJ5 (probable ribosomal protein S11, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111011744 PE=3 SV=1) HSP 1 Score: 452.6 bits (1163), Expect = 1.2e-123 Identity = 235/287 (81.88%), Postives = 253/287 (88.15%), Query Frame = 0
BLAST of Carg08067 vs. ExPASy TrEMBL
Match: A0A0A0KVQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G107470 PE=3 SV=1) HSP 1 Score: 396.0 bits (1016), Expect = 1.4e-106 Identity = 210/287 (73.17%), Postives = 234/287 (81.53%), Query Frame = 0
BLAST of Carg08067 vs. ExPASy TrEMBL
Match: A0A5A7TPI6 (Putative ribosomal protein S11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00350 PE=3 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 2.7e-102 Identity = 206/288 (71.53%), Postives = 228/288 (79.17%), Query Frame = 0
BLAST of Carg08067 vs. TAIR 10
Match: AT1G31817.1 (Ribosomal L18p/L5e family protein ) HSP 1 Score: 203.8 bits (517), Expect = 1.9e-52 Identity = 95/164 (57.93%), Postives = 132/164 (80.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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