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Carg08058 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCACACGAACCCAGCAACCCTGCCACGACGACGACGACGACGACCTCCCAGGCGGCCCTGGCCCTGCTGCCACCACAATTTCCGGTCAGTCCGTTTCCATGAGTGGTAGTGTCGGTTCTCCTTCTAACCGAAGCGAGCAAACCATGGCCACGCCTGCTAGCGACAACACTTTTCTTCGATTGAACAACCTCGACATCCATGGCGATGAGGCGGGCTCGCAACCTCCTACTGCGTGAGTTTATTTTCTTATTTTATGTTGTGATTTAGCTCAAATGTTGCCTTGCTTGGGTGTTTGAACAATGTTGAGTGATGTTTTGATTGAGTCCTGTTGATTAAGAGACTGTGAATTTGTGGTTTTAGCTTTGGTTGTTCGAATTGAACTGTGCGTTTGATTTGATCTGTTGAATTGGATGTTGTTTTGAGATAGTAACGTGAAGAAAAAGAGGGGTCAGCGTGCTGTTGGAGGGGACAAGAGTGGAAGAGGGCTTCGCCAATTTAGCATGAAAGGTGTTTGACTTCACCCATTTTCGTTATTTCTTCCTTCATTGCGTCCGATTCGACTCCGCCCGTGGCAGGGCATGCATTGAACCAGTGGATCGTGATGCATAATAGATTTGTTCTTATTTGTTTTGATTGTTTGATTGTTTTACTTGTTCCCATTGCTTGCAGTTTGTGAGAAAGTGGAGAGTAAGGGAAGAACGACGTACAACGAGGTAGGTTATTTCTTAGCATCGTTGATTTGTAAGAGAACGTAATCGAAACGTCCTTAATTATGATGTGAGATCCAACGAACGGTTGGAGAGGGAAACGAAGCATTCCTTACAAGGATGTGGAAACCTTTCCCTAATGGATGCGTTTTAAAATCTTGAGGGGAAGTTCGAAAGGGAAAGTCCAAAGAGGACAATATCTGCTAGCGGTCCAGCTTGGGCTGTTACATATATATACCCTATGATGCACTGGTGCATCAAAATGTTTGGTTTCACTTTTCAGTCTTGTGATCTCAGGTAGCAGACGAACTCGTTGCAGAGTTTGCTGATCCTGGCAACAGTCTTGCGACACCGGATCAGGTTTCAAATGCTTCATATTTTTGCTAGTTTTGTTATGCGAGAGGATAGGTGTCATTATATCTTTTACTCTGTTTATGACAGCAACAGTATGATGAAAAAAACATCAGGCGAAGGGTGTATGACGCGCTGAATGTTCTCATGGCAATGGATATCATATCAAAAGATAAAAAAGAGATACAATGGAAGGGTCTGCCACGTACAAGCCTGAACGATATCGAAGAACTAAAGGTTTCACTGCAGTCTGCATTTCTTCTATCATGCATCGAGCATATAATTTACCTTGTTATTGAACGATGCAGGCAGAGCGTCTTGGGCTTAGAAATAGGATTGAAAAGAAAGCGGCGTACTTGCAAGAGCTGGAGGAGCAGGTACGAATAGCTATCAGCATGGTGTTATCATCTTACAGTCTTTGGATTATGTGTATGATACGGGCGAGTTCTAAGACAATTCCATCCTTTTTACTTGGCTGATTCGGAACCTTTTCGCTTATCCCCATGTCAACTGGGTGGCCACCTGATCTAATTGAGTTATGTTAAATCCAAAAATAAAGTTATTGATATGGCAGTGCCATTATTTTATGTACCCTTTTTGTACTTAGCTTATTTACTGCATTTAAGTGATAAGAATGCAGCTCTAATGGTGTCTGGCTATCAGTATGTAGGCCTTCAGAACCTAATTCAGCGAAACGAACAGTTATTCAGTTCTGAGAATGCACCCAGTGGTGGCGTGTCTTTACCTTTCATCCTGGTGCAGGTATACGTTCTTCCCATTTTATTCGATGTAGTATGGCCTTATCTATTCTTCGGAACCTTATGATAAGCGTGATGTCTTTTTGATTGAACAAGATTTTGTCTAAGATTGTGAGATCCCACATCAGTTGGAGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAACACATACGTTTTAAAAACCTTGAGCGGAAGCTCGAAAGGGAAAGCCAAAGAGAACAATATTTGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTATTAGCGCCAGACACTGGGCGATGTGCTAGCAAGGAGGCTGAGTCCTGAAGGGGGGTGGACACTAGGCGGTGTGCACACTGGGCCCTAAAGGGAGGTGGATCGCTGGGCCCTGAAAGGGGGTGGATCGTTAGATCCCACATCGGTTGTAGAGGAGAATGAAATATTTTTTATAAGAGCGTGGAAATCTCTCCCTAACACACATTTTAAAAACCTTGAGAGGAAGCCTGAAAGGGAAAGCCCAAAGAGGATAGTATCTGCTAGCGGTGACTTGTCATAGTTGCTATCTATTGTTAAATCATTTAGACGGTAGATGCATTTGAAGCTTGTGCGCTCTTGTACGGCGTGTCTGTTACATGCTCATATTTATTTCTTCTTTTTCCTAAATGCAAGGAACTCCGGACACGTCTCGTATCTGTATAGAATTTCCGTTCTTCTCCTTGGGTTTCAAATTGATGGGCTTTCCTCTACCCAACATCCTCCTCACCTCATCCCCTTCAGCCTACTTGTGGGAAAAATAAAGACAAAACAACCACCTTAGTGTTCTTGTACAAAGTGTTCATAGTTCTTTATTTGTTCTAATCTTTACAAAATGTTGTTGGCCGTTGAATGTTTCAACACTTTTCCCTTCTTAGATTTTAAGATAATGAAGGTGGATGACCATTTACCTGAACTTATATTGAAGTTTCGGTCAATTTAGCAGTTAAAGGGCAAGCCATAAACTCATTTTGAGATCCCACGTCGGTTGGGGAGGAGAACGAAGCATTCTTAATAAGGGTGTGTAAACTTCTCCCTAGCAGACACATTTTAAAACCTTAAGGTGAAGCCCGAAAGGGAAAGCCCATAGAGGACAATATCTGCTAGCGGTGGCCTTGGGTTGTTACACTCGTTCCTTTGTAGTCAAGTGTTGAAGTCGTGTGGTCACCTGTATTATATATCCTAGCCCTACTCGTGCGATTAGACGTAGCTTTGGGCTATATTCATAGATTGAAGATTTTGGGAAGATCATTCTGAGGGCCCTAGCTTTCTTTGAAGCCTATCCAAAACTTAGCGACCTCACTAACGGGCAGGTTTGATTCGAATTGCTGGAATCGCGAGTCGTCATCCAGCAATTTGGGAGTATGGAAGTTAGATGCATTGGGAAAATTCATTTGGAAATCTCTCTCTATGTGTACCAAAATGTTCTGGTTCTCGGGTTCGTAAGGTAGATGGGATCTGCACAATTTGGAAGCATTTATATCCTAAGAAGATAATAATGTTTGCTTGGTCTCTTCTGTTGGGGAAATACAAACCCCAAAGATACTATTTAATAAAGAAAAAACGTCCCGACTCTTTCCTTTCTTCAGGTTGGACGGATGTGTAAAAGTGAAGACGATCCAATGGAACCGTCTCTTCTTCTGGTGTTAGCATCGGTTCATTAAGGAACGTGCTTCATAATCCTTTTTTCTTTTAAAGAAACTGAACTTTCGTCGAACAACCGAAAGAACACAAGGGCATACAAAAAACAAGCCCGCCAAAAACGAACTACAAAAAGAGACTCCAATTCAAAAGAACAAGACCAAGGCCATAATTACAGGAACACCAAGTGACCAACGCCCGGAAGCGAAAAACATAACACGCTCCCAAATCTGTCGTTCCTCCCAAGCAAGATATGATACCTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGTAGACGCGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAAGACAATATTTGCTAGCGTGGATCTGAGCCGTTATAAATGGTATCAGAGCCAAACACCGGACAATGTGCCAGCCTGCTCGCTGTTCCATGAAGGGGGTAGACACGAGGCGGTGTGCCAGTAAGGACAATGGGCCCCAAAGGGGAGTGGATTTGGGAGCGGTCCCACATCGACTGGAGGAAGGAAAGAGTTTCCGGGCCCCGAAGGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGTGGACACGTTTTAAAGCCCAACATCTGTCGACCTTGAGGGGAAGCTCGAAAGGGACAATATCTACTAGCGGTGGATCTGGGCCGTTACAATACCCCACAAAAAGTCGTAAGCTAGAAGTTTATGCTGATAGGGATGTACATAGCAGCAGTTTAACAAAAATTCTTTGATATCGTTTCTCGTCTAGAAAAGTATCGACGATGCAGGGGAGGGTTCTAGCATGTCAGGCATGTATCAACCACCCCAGATCCCTCTTCCTTCAATGTCTAACACGCCCGTTAGAACTCCAACCTCGCCACCGCTTCCTGGAATTATAAAAGCTCGTGTTAAACACGAACATTGA ATGGGCACACGAACCCAGCAACCCTGCCACGACGACGACGACGACGACCTCCCAGGCGGCCCTGGCCCTGCTGCCACCACAATTTCCGGTCAGTCCGTTTCCATGAGTGGTAGTGTCGGTTCTCCTTCTAACCGAAGCGAGCAAACCATGGCCACGCCTGCTAGCGACAACACTTTTCTTCGATTGAACAACCTCGACATCCATGGCGATGAGGCGGGCTCGCAACCTCCTACTGCTAACGTGAAGAAAAAGAGGGGTCAGCGTGCTGTTGGAGGGGACAAGAGTGGAAGAGGGCTTCGCCAATTTAGCATGAAAGGTCAACAGTATGATGAAAAAAACATCAGGCGAAGGGTGTATGACGCGCTGAATGTTCTCATGGCAATGGATATCATATCAAAAGATAAAAAAGAGATACAATGGAAGGGTCTGCCACGTACAAGCCTGAACGATATCGAAGAACTAAAGGCAGAGCGTCTTGGGCTTAGAAATAGGATTGAAAAGAAAGCGGCGTACTTGCAAGAGCTGGAGGAGCAGAATGCAGCTCTAATGGTGTCTGGCTATCAGTATGTAGGCCTTCAGAACCTAATTCAGCGAAACGAACAGTTATTCAGTTCTGAGAATGCACCCAGTGGTGGCGTGTCTTTACCTTTCATCCTGGTGCAGAAAAGTATCGACGATGCAGGGGAGGGTTCTAGCATGTCAGGCATGTATCAACCACCCCAGATCCCTCTTCCTTCAATGTCTAACACGCCCGTTAGAACTCCAACCTCGCCACCGCTTCCTGGAATTATAAAAGCTCGTGTTAAACACGAACATTGA ATGGGCACACGAACCCAGCAACCCTGCCACGACGACGACGACGACGACCTCCCAGGCGGCCCTGGCCCTGCTGCCACCACAATTTCCGGTCAGTCCGTTTCCATGAGTGGTAGTGTCGGTTCTCCTTCTAACCGAAGCGAGCAAACCATGGCCACGCCTGCTAGCGACAACACTTTTCTTCGATTGAACAACCTCGACATCCATGGCGATGAGGCGGGCTCGCAACCTCCTACTGCTAACGTGAAGAAAAAGAGGGGTCAGCGTGCTGTTGGAGGGGACAAGAGTGGAAGAGGGCTTCGCCAATTTAGCATGAAAGGTCAACAGTATGATGAAAAAAACATCAGGCGAAGGGTGTATGACGCGCTGAATGTTCTCATGGCAATGGATATCATATCAAAAGATAAAAAAGAGATACAATGGAAGGGTCTGCCACGTACAAGCCTGAACGATATCGAAGAACTAAAGGCAGAGCGTCTTGGGCTTAGAAATAGGATTGAAAAGAAAGCGGCGTACTTGCAAGAGCTGGAGGAGCAGAATGCAGCTCTAATGGTGTCTGGCTATCAGTATGTAGGCCTTCAGAACCTAATTCAGCGAAACGAACAGTTATTCAGTTCTGAGAATGCACCCAGTGGTGGCGTGTCTTTACCTTTCATCCTGGTGCAGAAAAGTATCGACGATGCAGGGGAGGGTTCTAGCATGTCAGGCATGTATCAACCACCCCAGATCCCTCTTCCTTCAATGTCTAACACGCCCGTTAGAACTCCAACCTCGCCACCGCTTCCTGGAATTATAAAAGCTCGTGTTAAACACGAACATTGA MGTRTQQPCHDDDDDDLPGGPGPAATTISGQSVSMSGSVGSPSNRSEQTMATPASDNTFLRLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMKGQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKAAYLQELEEQNAALMVSGYQYVGLQNLIQRNEQLFSSENAPSGGVSLPFILVQKSIDDAGEGSSMSGMYQPPQIPLPSMSNTPVRTPTSPPLPGIIKARVKHEH Homology
BLAST of Carg08058 vs. NCBI nr
Match: KAG7030882.1 (Transcription factor-like protein DPB, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 530.0 bits (1364), Expect = 1.2e-146 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0
BLAST of Carg08058 vs. NCBI nr
Match: XP_022942389.1 (transcription factor-like protein DPB isoform X1 [Cucurbita moschata] >XP_023536263.1 transcription factor-like protein DPB isoform X1 [Cucurbita pepo subsp. pepo] >KAG6600223.1 Transcription factor-like protein DPB, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 449.5 bits (1155), Expect = 2.0e-122 Identity = 259/359 (72.14%), Postives = 259/359 (72.14%), Query Frame = 0
BLAST of Carg08058 vs. NCBI nr
Match: XP_022966582.1 (transcription factor-like protein DPB isoform X1 [Cucurbita maxima]) HSP 1 Score: 449.5 bits (1155), Expect = 2.0e-122 Identity = 259/359 (72.14%), Postives = 259/359 (72.14%), Query Frame = 0
BLAST of Carg08058 vs. NCBI nr
Match: XP_022966661.1 (transcription factor-like protein DPB isoform X2 [Cucurbita maxima]) HSP 1 Score: 448.4 bits (1152), Expect = 4.5e-122 Identity = 258/357 (72.27%), Postives = 258/357 (72.27%), Query Frame = 0
BLAST of Carg08058 vs. NCBI nr
Match: XP_022942391.1 (transcription factor-like protein DPB isoform X2 [Cucurbita moschata] >XP_023536267.1 transcription factor-like protein DPB isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 448.4 bits (1152), Expect = 4.5e-122 Identity = 258/357 (72.27%), Postives = 258/357 (72.27%), Query Frame = 0
BLAST of Carg08058 vs. ExPASy Swiss-Prot
Match: Q9FNY2 (Transcription factor-like protein DPB OS=Arabidopsis thaliana OX=3702 GN=DPB PE=1 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 3.3e-67 Identity = 155/257 (60.31%), Postives = 173/257 (67.32%), Query Frame = 0
BLAST of Carg08058 vs. ExPASy Swiss-Prot
Match: Q9FNY3 (Transcription factor-like protein DPA OS=Arabidopsis thaliana OX=3702 GN=DPA PE=1 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.7e-23 Identity = 55/114 (48.25%), Postives = 83/114 (72.81%), Query Frame = 0
BLAST of Carg08058 vs. ExPASy Swiss-Prot
Match: Q14186 (Transcription factor Dp-1 OS=Homo sapiens OX=9606 GN=TFDP1 PE=1 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 8.0e-21 Identity = 77/212 (36.32%), Postives = 102/212 (48.11%), Query Frame = 0
BLAST of Carg08058 vs. ExPASy Swiss-Prot
Match: Q17QZ4 (Transcription factor Dp-1 OS=Bos taurus OX=9913 GN=TFDP1 PE=2 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.8e-20 Identity = 70/175 (40.00%), Postives = 90/175 (51.43%), Query Frame = 0
BLAST of Carg08058 vs. ExPASy Swiss-Prot
Match: Q14188 (Transcription factor Dp-2 OS=Homo sapiens OX=9606 GN=TFDP2 PE=1 SV=2) HSP 1 Score: 100.5 bits (249), Expect = 3.0e-20 Identity = 67/173 (38.73%), Postives = 88/173 (50.87%), Query Frame = 0
BLAST of Carg08058 vs. ExPASy TrEMBL
Match: A0A6J1HND7 (transcription factor-like protein DPB isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466193 PE=3 SV=1) HSP 1 Score: 449.5 bits (1155), Expect = 9.9e-123 Identity = 259/359 (72.14%), Postives = 259/359 (72.14%), Query Frame = 0
BLAST of Carg08058 vs. ExPASy TrEMBL
Match: A0A6J1FR57 (transcription factor-like protein DPB isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447450 PE=3 SV=1) HSP 1 Score: 449.5 bits (1155), Expect = 9.9e-123 Identity = 259/359 (72.14%), Postives = 259/359 (72.14%), Query Frame = 0
BLAST of Carg08058 vs. ExPASy TrEMBL
Match: A0A6J1HPY1 (transcription factor-like protein DPB isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466193 PE=3 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 2.2e-122 Identity = 258/357 (72.27%), Postives = 258/357 (72.27%), Query Frame = 0
BLAST of Carg08058 vs. ExPASy TrEMBL
Match: A0A6J1FNR0 (transcription factor-like protein DPB isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447450 PE=3 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 2.2e-122 Identity = 258/357 (72.27%), Postives = 258/357 (72.27%), Query Frame = 0
BLAST of Carg08058 vs. ExPASy TrEMBL
Match: A0A6J1CH21 (transcription factor-like protein DPB OS=Momordica charantia OX=3673 GN=LOC111011579 PE=3 SV=1) HSP 1 Score: 429.5 bits (1103), Expect = 1.1e-116 Identity = 252/359 (70.19%), Postives = 254/359 (70.75%), Query Frame = 0
BLAST of Carg08058 vs. TAIR 10
Match: AT5G03415.1 (Transcription factor DP ) HSP 1 Score: 256.5 bits (654), Expect = 2.4e-68 Identity = 155/257 (60.31%), Postives = 173/257 (67.32%), Query Frame = 0
BLAST of Carg08058 vs. TAIR 10
Match: AT5G03415.2 (Transcription factor DP ) HSP 1 Score: 247.7 bits (631), Expect = 1.1e-65 Identity = 151/251 (60.16%), Postives = 170/251 (67.73%), Query Frame = 0
BLAST of Carg08058 vs. TAIR 10
Match: AT5G02470.1 (Transcription factor DP ) HSP 1 Score: 111.3 bits (277), Expect = 1.2e-24 Identity = 55/114 (48.25%), Postives = 83/114 (72.81%), Query Frame = 0
BLAST of Carg08058 vs. TAIR 10
Match: AT5G02470.2 (Transcription factor DP ) HSP 1 Score: 111.3 bits (277), Expect = 1.2e-24 Identity = 55/114 (48.25%), Postives = 83/114 (72.81%), Query Frame = 0
BLAST of Carg08058 vs. TAIR 10
Match: AT5G02470.3 (Transcription factor DP ) HSP 1 Score: 111.3 bits (277), Expect = 1.2e-24 Identity = 55/114 (48.25%), Postives = 83/114 (72.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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