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Carg08056 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCTCGCTCGCTCGCTCGATTCTGCTTGCTCACTGTGGAAATTATTTTAAAGAAGCAACGGAAATGATTATTTTCGCGGATTTTCAATCTTATTTCTCATTGTTCGTTATTAATTAGTTTTATTGTTCCATTTCATTTCAGTTTTAATATTGTTTGTTAGTTGTATTCTTGGTATGCCTATTTAAAGGTTACGGTACTTTAATCACTCATCGATGAGAAAATTTCTCTTGGAATCATTTCTCTCTGTATATTCTGTTTCTTGCTGCGATTCTGTGAGTATCCGCTGTGGGCTTATTTGTAGTTAGGTGATGAAATTAATGGAACTTTGGAGGTCTCTACTCCTATAAAATTAGTTTGTGGTTTGTTTTCCTCGGTTTCGTTGGGATCCCCGCTTTGCAGTGTTATTTTCCCTGTTTCTAAATGGAAGTTTTGTTAGTATAGTTATGATTATTTCATAATGGAACTGCAATGGTTATATCTTTGTTAACATCCTAAGCAGGTGGAAAGTAGAGATCTCTTGATGGAGGTGCCACCAAATGAAGATTCTGAGCACCCAGTAAATTCTTCCATTGATACCGTTCATCCACAACAGGATAATGTGCTCCCTGATACCGTAAATGACGGGTATATAAGCACGTCACTTCTTGTATTTGCTGTAATGTTTATTTTGGGGGTCATGATGTCGGTTGCGATCTTGTTATCTTAATATTGGTTGTAGCTTCTCCCACATTGTGTAGAATTGTTGTATCACTGTTAGTCAAAATACAACTTATATTGTAACCGCCCAAGCCCACGGCTAACAGATATTGGCTGCTTTGGCCCGTATTGTCGTCAGCCTCACGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCCTCTCTCCAACCGAATAAAGTTTCAAATTGCTTGCTTTTACTTCGCTGATGTTTGTATTTTGGTTGTAATAGGAGCAAGTTTGGGTTTCCTTCAATTTCAGTTCGTTTTCTGAGGGCACCTTTAGCAACTAGTTAAAACTGATTTTTTTTCCTTCTGAGTTTTTGTTCTTTCATTGCCTTTTTGTAGAGATTATAGTAGAGTATGGTTTCGGGATGATCCGTAGATTTATAGAGAGCATTTTATTTGCTTCTACCGTCAGTTATGTTTTATCTGTTTGAATGTGATTTTTTGAACTTGTAATTTTCAGAGTCATGGAGCAGAAGCAGGTAATCAATGATGAAGAAATAAGAGGTACAATCGAAGCAATTGCATCCACGGGGAAATTCTGGTATTTTTCTTCTCCATCTAATTTCCATTGACTTAGTATGAGTATAAAGATGCTACATCACACATCTGGTTAGAAGTTGTGAGATCCCACATCGGTTGGAAACCAGAATGAAGCATTCTTTATAAGGGTGTTGAAACGTCTCCCTAATAGACGCGTTTTAAAACCTTGAGAGGAAGCCCAAAAGCGAAAGCCTAAAGAGAACAATATTTGCTAGCTGTGGGCTTGAGCTGTTACAAATGGTATCAGAGCCAGATACTGGGCGGTGTGCCAGTGAGGACGCTAGAACCCCAGGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAATGAAGCGTTCACTATTAGGATGTGGAAACCTCTCCCTAACTAACGCGTTTTAAAACCTTGAGGTGAAGCTCGAAAGGGAAAGCCCAAAGAGGACAATATCTATTAACGGTGGGCTTAGACTATTACAAATGGTATCAGAGCTAGACACCGGGCAGTGTGTCATGAGGACGCAAGACTCCAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGATGGAACGAAACATTCTTAAGGGTGTAGAAACCTCTCCCTAACAGACGCATTTTAAAGTCTTGAGGGGAAGCTCGAATGGGAAAGTCCAAGAATGACAATATCTGCTAACAGTGACCTTAGGTTGTTACAGAAGTGTACGGATTTAGACCTCAAAATCTAAAGTGCTTTGATATGTTAAAAGAGGAGAATTATTGTTCTTGAAAAAACCTTCACAAATTGGAAGAATTAATCAGTTTTAACATTTTCTTATTGTTTTGAACTTACAGTATATATGTGTGTATATGTATGTTATGTTCTCAGGCATGATTGGGAGAAATTGAAGAGCATGCTATCCTTTCAGCTGAAGCAGGTATGGGGAGGTACGCATGAATGCATTTCGTTTGTTATTTTCCAGTGAATGCTTTATGGTTATTGCATAGCGGGCATGCATATCATATTTGTTATATCCAGTTTTTTTTATGAAAATTTTGAAACCTTCTTATTTTCCTTTCTCTCCTGCCTTTGAAGGTGCTGTCCGAGTATCCTGAAGCGAAAGTGTCCGGTGAACAAAGTACTTTAGGGGAACCCTTCCCGGAGCTGGTAAAGCGGCTCGATGAAGGTTTATGAGCTTCTCCACTTCCTATTGTTCACCGTTGATTTATTTGTAAACTGTTTTTCTCTTCCTTTTGGTATTTTTGTTTTACAAAACTTATGATCACCGGAGAAGGTCTCGTTACTATGTAACTTTGATGTCATGTCGGTCATGTAAATTCCTGATCAACGGTCGTTCTTTTGAAGCCTTAGTCGATTAGTTATTAATCTACTTGAGATGTGGGCGAGATTTAGAACTGGTAGTGTACTTGAGTTGAAGCATTAGGATGAGATGGGCTCGTTCTAGTTTTTCCTTTTTCGTGTTTTTGTTCGTATAAGAAGTAGATTTCATTCAAATTCAAGGAAGAGGGAGACAGCACTTTACTTAATTCAATATGTTTTTTTGGATTGCAGCACTTCTTAGCTTCATTGAAGGTCCTCCATTTACCCTTCAAAGGATTTGTGAGGTGATTGTCCATGTTTACAATTCTATTTCTTTCTTTACATTTTCATATTTAATTTTTTTGTTCGTTCATTAATTATTAGTGAGACTGATAAAGAACGCGCTCCTTACCAACCTCGAACTCTTGTCAAACCTTATTAGTTAACAGTTGTCCAAAAATTAGATAATTTTTATCAAATATCGAAATTTGACTAAATATTTTCTCTAAAATTGACGTCGAAACAGATTCCTATTGGATGCACGGGGCGTCTATCCCAAACTCTCAAAGCTTGTGCTAGCCCTGGAAAAGGTATGGCGTTTTCTGGTGTCGATCTTCAGTTTGTTTTTTGTTTGGTTTTCTGATATTGCATTATTATTATCGAATCATGACGATTAATCTTGATGAGGTAATACTCGATATCATGTCTAATTATTTGAAGTTTACATTTATAGAATCTTTTGGTGACATCCACACTCGCCATCAGTCCTGCCCCGAGTCTACCGTCATCCAACGAAAAGCCAAATGAGTCGGAGGAGGCAGAGAAAGGTGCGGAAGAACAAAAGCATTCAGCAGATGTAGTAGAAAATGGAGTTGAAGGTGTAGGTGGAGACAGGGATGAGGTAATGACGGAGGTTGAAGAGGGCGACATGAATGATGATATGACAATAGACATAGCCCTTGAAGAAATAGTTGGATCATCTGAGACAACAAATTCGGCTGCAAACAGTAAATCTTAGCCTTCCTCAGTTCTGCTAATCTCTTCTTCTACGTCGAGGGAGCGACACGGCCGATAATCCATAGTTCTTTGACATGTCAATTTGTTCAATCCAATATAATTCGGCTCGGATGTTGCTTGGATGTTTTCTTGATTGGATATTTGAGTGATCACTATGTTCTTGGCTTCTTAACTTTTGATATAGCATAGTCCATCGGCCATTGAAAATGTGGTTTGTTCCCTTTGCAACTGTTGATTTCTTCTAATCCTTCATGTAGATTTGGTAACGAGTTGAGGGGAAGGGGCGAAGCACAACTCGACCGAGAGACAGAGAGAGAGGTGGCTGACCTTTCTTTCCCGGGCTCGTGTTCTGAGTGTATCATC GCTCGCTCGCTCGCTCGATTCTGCTTGCTCACTGTGGAAATTATTTTAAAGAAGCAACGGAAATGATTATTTTCGCGGATTTTCAATCTTATTTCTCATTGTTCGTTATTAATTAGTTTTATTGTTCCATTTCATTTCAGTTTTAATATTGTTTGTTAGTTGTATTCTTGGTATGCCTATTTAAAGGTTACGGTACTTTAATCACTCATCGATGAGAAAATTTCTCTTGGAATCATTTCTCTCTGTATATTCTGTTTCTTGCTGCGATTCTGTGAGTATCCGCTGTGGGCTTATTTGTAGTTAGGTGATGAAATTAATGGAACTTTGGAGGTCTCTACTCCTATAAAATTAGTTTGTGGTTTGTTTTCCTCGGTTTCGTTGGGATCCCCGCTTTGCAGTGTTATTTTCCCTGTTTCTAAATGGAAGTTTTGTTAGTATAGTTATGATTATTTCATAATGGAACTGCAATGGTTATATCTTTGTTAACATCCTAAGCAGGTGGAAAGTAGAGATCTCTTGATGGAGGTGCCACCAAATGAAGATTCTGAGCACCCAGTAAATTCTTCCATTGATACCGTTCATCCACAACAGGATAATGTGCTCCCTGATACCGTAAATGACGGGCATGATTGGGAGAAATTGAAGAGCATGCTATCCTTTCAGCTGAAGCAGGTGCTGTCCGAGTATCCTGAAGCGAAAGTGTCCGGTGAACAAAGTACTTTAGGGGAACCCTTCCCGGAGCTGGTAAAGCGGCTCGATGAAGCACTTCTTAGCTTCATTGAAGGTCCTCCATTTACCCTTCAAAGGATTTGTGAGATTCCTATTGGATGCACGGGGCGTCTATCCCAAACTCTCAAAGCTTGTGCTAGCCCTGGAAAAGGTATGGCGTTTTCTGGTGTCGATCTTCAGTTTGTTTTTTGTTTGAATCTTTTGGTGACATCCACACTCGCCATCAGTCCTGCCCCGAGTCTACCGTCATCCAACGAAAAGCCAAATGAGTCGGAGGAGGCAGAGAAAGGTGCGGAAGAACAAAAGCATTCAGCAGATGTAGTAGAAAATGGAGTTGAAGGTGTAGGTGGAGACAGGGATGAGGTAATGACGGAGGTTGAAGAGGGCGACATGAATGATGATATGACAATAGACATAGCCCTTGAAGAAATAGTTGGATCATCTGAGACAACAAATTCGGCTGCAAACAGTAAATCTTAGCCTTCCTCAGTTCTGCTAATCTCTTCTTCTACGTCGAGGGAGCGACACGGCCGATAATCCATAGTTCTTTGACATGTCAATTTGTTCAATCCAATATAATTCGGCTCGGATGTTGCTTGGATGTTTTCTTGATTGGATATTTGAGTGATCACTATGTTCTTGGCTTCTTAACTTTTGATATAGCATAGTCCATCGGCCATTGAAAATGTGGTTTGTTCCCTTTGCAACTGTTGATTTCTTCTAATCCTTCATGTAGATTTGGTAACGAGTTGAGGGGAAGGGGCGAAGCACAACTCGACCGAGAGACAGAGAGAGAGGTGGCTGACCTTTCTTTCCCGGGCTCGTGTTCTGAGTGTATCATC ATGGAGGTGCCACCAAATGAAGATTCTGAGCACCCAGTAAATTCTTCCATTGATACCGTTCATCCACAACAGGATAATGTGCTCCCTGATACCGTAAATGACGGGCATGATTGGGAGAAATTGAAGAGCATGCTATCCTTTCAGCTGAAGCAGGTGCTGTCCGAGTATCCTGAAGCGAAAGTGTCCGGTGAACAAAGTACTTTAGGGGAACCCTTCCCGGAGCTGGTAAAGCGGCTCGATGAAGCACTTCTTAGCTTCATTGAAGGTCCTCCATTTACCCTTCAAAGGATTTGTGAGATTCCTATTGGATGCACGGGGCGTCTATCCCAAACTCTCAAAGCTTGTGCTAGCCCTGGAAAAGGTATGGCGTTTTCTGGTGTCGATCTTCAGTTTGTTTTTTGTTTGAATCTTTTGGTGACATCCACACTCGCCATCAGTCCTGCCCCGAGTCTACCGTCATCCAACGAAAAGCCAAATGAGTCGGAGGAGGCAGAGAAAGGTGCGGAAGAACAAAAGCATTCAGCAGATGTAGTAGAAAATGGAGTTGAAGGTGTAGGTGGAGACAGGGATGAGGTAATGACGGAGGTTGAAGAGGGCGACATGAATGATGATATGACAATAGACATAGCCCTTGAAGAAATAGTTGGATCATCTGAGACAACAAATTCGGCTGCAAACAGTAAATCTTAG MEVPPNEDSEHPVNSSIDTVHPQQDNVLPDTVNDGHDWEKLKSMLSFQLKQVLSEYPEAKVSGEQSTLGEPFPELVKRLDEALLSFIEGPPFTLQRICEIPIGCTGRLSQTLKACASPGKGMAFSGVDLQFVFCLNLLVTSTLAISPAPSLPSSNEKPNESEEAEKGAEEQKHSADVVENGVEGVGGDRDEVMTEVEEGDMNDDMTIDIALEEIVGSSETTNSAANSKS Homology
BLAST of Carg08056 vs. NCBI nr
Match: KAG7030880.1 (hypothetical protein SDJN02_04917 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 441.0 bits (1133), Expect = 6.1e-120 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0
BLAST of Carg08056 vs. NCBI nr
Match: KAG6600221.1 (Serine/threonine-protein phosphatase 4 regulatory subunit 2-A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 344.0 bits (881), Expect = 1.0e-90 Identity = 197/256 (76.95%), Postives = 200/256 (78.12%), Query Frame = 0
BLAST of Carg08056 vs. NCBI nr
Match: XP_022942942.1 (serine/threonine-protein phosphatase 4 regulatory subunit 2-B-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 337.0 bits (863), Expect = 1.2e-88 Identity = 193/256 (75.39%), Postives = 197/256 (76.95%), Query Frame = 0
BLAST of Carg08056 vs. NCBI nr
Match: XP_022942943.1 (serine/threonine-protein phosphatase 4 regulatory subunit 2-B-like isoform X2 [Cucurbita moschata] >XP_022942944.1 serine/threonine-protein phosphatase 4 regulatory subunit 2-B-like isoform X2 [Cucurbita moschata] >XP_022942945.1 serine/threonine-protein phosphatase 4 regulatory subunit 2-B-like isoform X2 [Cucurbita moschata] >XP_022942946.1 serine/threonine-protein phosphatase 4 regulatory subunit 2-B-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 337.0 bits (863), Expect = 1.2e-88 Identity = 193/256 (75.39%), Postives = 197/256 (76.95%), Query Frame = 0
BLAST of Carg08056 vs. NCBI nr
Match: XP_023005466.1 (serine/threonine-protein phosphatase 4 regulatory subunit 2-A-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 325.1 bits (832), Expect = 4.9e-85 Identity = 188/256 (73.44%), Postives = 192/256 (75.00%), Query Frame = 0
BLAST of Carg08056 vs. ExPASy TrEMBL
Match: A0A6J1FX66 (serine/threonine-protein phosphatase 4 regulatory subunit 2-B-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447827 PE=3 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 6.0e-89 Identity = 193/256 (75.39%), Postives = 197/256 (76.95%), Query Frame = 0
BLAST of Carg08056 vs. ExPASy TrEMBL
Match: A0A6J1FRN2 (serine/threonine-protein phosphatase 4 regulatory subunit 2-B-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447827 PE=3 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 6.0e-89 Identity = 193/256 (75.39%), Postives = 197/256 (76.95%), Query Frame = 0
BLAST of Carg08056 vs. ExPASy TrEMBL
Match: A0A6J1L332 (serine/threonine-protein phosphatase 4 regulatory subunit 2-A-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498416 PE=3 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 2.4e-85 Identity = 188/256 (73.44%), Postives = 192/256 (75.00%), Query Frame = 0
BLAST of Carg08056 vs. ExPASy TrEMBL
Match: A0A6J1KV16 (serine/threonine-protein phosphatase 4 regulatory subunit 2-A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498416 PE=3 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 2.4e-85 Identity = 188/256 (73.44%), Postives = 192/256 (75.00%), Query Frame = 0
BLAST of Carg08056 vs. ExPASy TrEMBL
Match: A0A6J1E6V6 (serine/threonine-protein phosphatase 4 regulatory subunit 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430495 PE=3 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 1.3e-59 Identity = 154/257 (59.92%), Postives = 167/257 (64.98%), Query Frame = 0
BLAST of Carg08056 vs. TAIR 10
Match: AT5G17070.1 (CONTAINS InterPro DOMAIN/s: Protein phosphatase 4 core regulatory subunit R2 (InterPro:IPR015267); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 122.1 bits (305), Expect = 5.8e-28 Identity = 94/226 (41.59%), Postives = 122/226 (53.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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