Carg08044 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTCTTATTCTTCTACTGTCTCTCTTCTGCTACTTCTCATTTCCTCTTCTCTCTCAAAATCCACTTCAAATTCCTCCAAACCCTTCTTCCCTCAATCCAATTTCACAATCAAACCCCCCTCTCCTTTCCCCAGAACTTACCGACCCATTTCTTCAAAAGGGCCGTCCATGAATCTCTGGAACAAGCTCGGATTCGGGTCCAGAGCCACCGAGGCCTCGCCGGAGTCGTTGGCGATTGCACAAGGTCCAGACGATGACATTCCGGCGCCGGGTCAGCAGTTTGCCCAATTTGGGGCGGGCTGCTTTTGGGGTGTCGAATTGGCGTTTCAACGAGTGCCCGGTTTGACCAAAACGGAGGTCGGTTACACTCAAGGGCATATTCATAATCCGACTTATGAGGATGTTTGTTCGGGGCAGAGCAATCACGCTGAGGTCGTTCGGGTTCAGTATGATCCCAAAGAGTGCAGTTACGAGTCTCTGCTTGATGCGTTTTGGGCTCGACATGATCCTACTACTCTTAATCGGCAGGTTCGTTGAGTATTTTTTTTTTTTTTTTTACCAATTCTTGAGATATGTTATGGTTCTTGACTGAGTTCTTTGTGTTTCTTTTGAAATTTCTATTGGTTAACCTTTGTTTGGGTAGTTCCTCTTGGGATTATTGGAGTTCTTTGGTTATTTTGTTAAGATTTTATAGAATTGGAGTTTGGATGCTCACTAATTTCACATTTGAGTTCATTTTCTCTGATGCGGATTGCTTGTTGATTTGAAATGGTCAAGCCTCATGTTTTGTATGGGTCAGGAGAAAGGAAAAGCATATATTTGGTTCTGAAAAATATAATAGTAACGAAGTGGACAAATATGAACTGCGTTAGAAGTCTATGGAGGGATGTTATGTTTTCGTTAATGCTTTGTTATTCAAAGTATGATGCTTTGTTATTCAAAGCACGATGCTTTCATGACCATACTGATAATTGCAGATTTTTACTTGTGTTAAGGAAGACTGTTTGTTTTGATATTTCGCTACAGATGTATGACTCCTGTATTTTGTTGTGTTTCCTGGTAAACAATGTGAAGGAACGCAAAGGATGACTGTTTTTAATAGCATAAAAACATGAAATATATGTTTAAGATGTTGAGCTTATCAAACGTAGGCTGGGTTGTGCAGGGCTAGACATGACTTCACCTCACTTTGGATATTGTAATTTATGTCTCTGTTACCATATTTTTTTCGTGCATTGTGCTTCTTTAGTTGGAATAGAACATTTTTTATTGAAAAAGAAAAATGAAATTGGCAAAGGAGACACCTCTTAATTTCAGAAGAGGGCATGCTGTTTGTGTATTATCTTTCTTATCCATGTCTGTGTTGGTTTTAGGTTTAAGGGTAGTGCATTGATTCAGGTGATTTGAGGGTTGAGAATTTAGCTGAAAAGAATGTTGCCTTTTTGACTGAGTGGCTGTATATTTTTCCTTGGAACTTTGCGAGGGTTGAGAAATTCGTTGCTTTTTTTACTGAATTGCTATAGCATTTCTCCTTGGAACTTGATGCTTCTCGATATAGGATCGATTTAAGTATGGACATCATTCCAATGGTTAGAGCTCCAATGTGTTTTAAATGGCACTTTCGTGAATCTTAAGAAAGCTGTTCTCATTGTTTGCCTTGTTTTATCAGATTCATTAAATTATCAGTTGGTATGTGGCCTATGCATTTCTTGGACCATTGGATGGACCGACATGGTTTCTTTTGGTTGCGTTTCCTTGTCTTCACAAACTTCCCTCCATAAAAAATGCAAATTGCATTTTTTATTCTTTTTTGTTTGTCGGCTGTTCTTTAGGGGTAGGGGTCAAATGTAAAATTCTTAAGAAAGCTGAGTTTTTCTTAAGGCATGTCATGCGCTCAGCTTACCCTAGCCCCGTTCCTTTTGCTCAGCTTTTCTCGATCAAGATTTTTGTCTCCTTGGTTGGAACAGGTCGAAAAATCCAACCACTTCACCTCCTACTTGACTTCTGCGTCAACCCAACCCGAATGGAGGACTAACATCATATACCTTATCCAGAGGTTTCCCAATTTAGTTCTTGCTCATAGACTCGTAGTGATTTGCTCTTTGCCAAACCAAAAAAAAAAAAAATGCATTTAAGTCTTTGGGTCACATTCTTTGGAGGAACCTCCTCTTTGAAGATTTGGCTTACAGTCTAAAGCTTTTAGGGTGCTGGTAGTTCGAGAGAACTGTTCTCTTATAATAGGAAAAGTCCTTTTGCATCCTCCTATTCTTGACAGGGGAAGATTTCTTCGGTAGGTTCACTTGTAAGCTTCATTTATAGAGGATTGGTTTAGAAAGAAATAGGAGTGTTCAAGCTTTGAATCAGTGATTTCAGGGGATATGGATCCCACTCGACCAGCATTTCAAATGACTCGAAAATCATCCTCCGACCAATTTGGGGAAAAAAGTATTATTTTTCAAGGACTACAGACAGCTAAACATATTGTTCTTGTTTCTTACTTGTGTCATTTTCTAGCATGAGCTACTTATCTTATTTCTTGTACTGAAAGATGCATCATACACGATATTTAGCATTGAGATAACTTTTCCATTATTATGCATATGATATGAGTCTTCTATTCATTCCCTGATCTAAATCCAAGTAATAGTATTCATATTGTTTGGGTTGACAGGGAAATGATGTGGGAACACAATACAGATCTGGCATATACTTCTACACTCCTGAACAACAGAAAGCGGCTCTCGAATCAATGGAACGCCACCAGAAGTTATTGAACAGGAAGATCATGACTGAGATTCTTCCTGCCAAGAAATTCTACCGAGCGGAGGAATACCATCAGCAATACCTTGAGAAAGGTGGGAGGTTTGGCTCCAAGCAATCTGCTGCTAAAGGCTGCAATGACCCAATTCGATGCTACGGTTAGTTAAGTTGGTCTTGGCAGGTAATATTAGTTTCCCAGCTTCAAGATTATGGTATTCTGTATACATCTATGACTAGATTTGACAAGCTCTCTCAGACGTTACTTGTAAAAAGAATCTTGGATGTATGTATCTATCTGTAATTGGTTTGGCTTTCCTAATAAACGAAGTTGTAGTTGTAAGGATGCTTTCCCTCAATCTAATGGTCTAAAAATCTTGTGGAAGCTTGATGAATTGGTCCATGCATGTTGAAAGTGAATGATATCATATTATTTTTAAAAGTACTTTACAAAGCGTTTTTGATATCAACATAATCCTTTTGTACAAAGTAATGGTGGAAAGTCATCGATGATGTTCTATGAATAATAATAGAAATGGTCGTAGTAGAATATTCAAACATATCTTTGTTTGGAGGAAAGTTTAGTTTGCATGAGTAGATACGATTATTAGATGTGTAGTCTGCATTATCGTAATTTTCAATCCATGAATAGATTTAAACTTCCAATTTCGTATTTAATTGTCATTAGTTCTAATATTTTGAGTTATAGTTCATGTTTTGTGTCGGCCAAATTTCTTACTCAAACCATTGATGTCTTAGTTTGTTGTTACTTGTTTCAATCCTCTAAGCTA CCTCTTATTCTTCTACTGTCTCTCTTCTGCTACTTCTCATTTCCTCTTCTCTCTCAAAATCCACTTCAAATTCCTCCAAACCCTTCTTCCCTCAATCCAATTTCACAATCAAACCCCCCTCTCCTTTCCCCAGAACTTACCGACCCATTTCTTCAAAAGGGCCGTCCATGAATCTCTGGAACAAGCTCGGATTCGGGTCCAGAGCCACCGAGGCCTCGCCGGAGTCGTTGGCGATTGCACAAGGTCCAGACGATGACATTCCGGCGCCGGGTCAGCAGTTTGCCCAATTTGGGGCGGGCTGCTTTTGGGGTGTCGAATTGGCGTTTCAACGAGTGCCCGGTTTGACCAAAACGGAGGTCGGTTACACTCAAGGGCATATTCATAATCCGACTTATGAGGATGTTTGTTCGGGGCAGAGCAATCACGCTGAGGTCGTTCGGGTTCAGTATGATCCCAAAGAGTGCAGTTACGAGTCTCTGCTTGATGCGTTTTGGGCTCGACATGATCCTACTACTCTTAATCGGCAGGGAAATGATGTGGGAACACAATACAGATCTGGCATATACTTCTACACTCCTGAACAACAGAAAGCGGCTCTCGAATCAATGGAACGCCACCAGAAGTTATTGAACAGGAAGATCATGACTGAGATTCTTCCTGCCAAGAAATTCTACCGAGCGGAGGAATACCATCAGCAATACCTTGAGAAAGGTGGGAGGTTTGGCTCCAAGCAATCTGCTGCTAAAGGCTGCAATGACCCAATTCGATGCTACGGTTAGTTAAGTTGGTCTTGGCAGGTAATATTAGTTTCCCAGCTTCAAGATTATGGTATTCTGTATACATCTATGACTAGATTTGACAAGCTCTCTCAGACGTTACTTGTAAAAAGAATCTTGGATGTATGTATCTATCTGTAATTGGTTTGGCTTTCCTAATAAACGAAGTTGTAGTTGTAAGGATGCTTTCCCTCAATCTAATGGTCTAAAAATCTTGTGGAAGCTTGATGAATTGGTCCATGCATGTTGAAAGTGAATGATATCATATTATTTTTAAAAGTACTTTACAAAGCGTTTTTGATATCAACATAATCCTTTTGTACAAAGTAATGGTGGAAAGTCATCGATGATGTTCTATGAATAATAATAGAAATGGTCGTAGTAGAATATTCAAACATATCTTTGTTTGGAGGAAAGTTTAGTTTGCATGAGTAGATACGATTATTAGATGTGTAGTCTGCATTATCGTAATTTTCAATCCATGAATAGATTTAAACTTCCAATTTCGTATTTAATTGTCATTAGTTCTAATATTTTGAGTTATAGTTCATGTTTTGTGTCGGCCAAATTTCTTACTCAAACCATTGATGTCTTAGTTTGTTGTTACTTGTTTCAATCCTCTAAGCTA ATGAATCTCTGGAACAAGCTCGGATTCGGGTCCAGAGCCACCGAGGCCTCGCCGGAGTCGTTGGCGATTGCACAAGGTCCAGACGATGACATTCCGGCGCCGGGTCAGCAGTTTGCCCAATTTGGGGCGGGCTGCTTTTGGGGTGTCGAATTGGCGTTTCAACGAGTGCCCGGTTTGACCAAAACGGAGGTCGGTTACACTCAAGGGCATATTCATAATCCGACTTATGAGGATGTTTGTTCGGGGCAGAGCAATCACGCTGAGGTCGTTCGGGTTCAGTATGATCCCAAAGAGTGCAGTTACGAGTCTCTGCTTGATGCGTTTTGGGCTCGACATGATCCTACTACTCTTAATCGGCAGGGAAATGATGTGGGAACACAATACAGATCTGGCATATACTTCTACACTCCTGAACAACAGAAAGCGGCTCTCGAATCAATGGAACGCCACCAGAAGTTATTGAACAGGAAGATCATGACTGAGATTCTTCCTGCCAAGAAATTCTACCGAGCGGAGGAATACCATCAGCAATACCTTGAGAAAGGTGGGAGGTTTGGCTCCAAGCAATCTGCTGCTAAAGGCTGCAATGACCCAATTCGATGCTACGGTTAG MNLWNKLGFGSRATEASPESLAIAQGPDDDIPAPGQQFAQFGAGCFWGVELAFQRVPGLTKTEVGYTQGHIHNPTYEDVCSGQSNHAEVVRVQYDPKECSYESLLDAFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQQKAALESMERHQKLLNRKIMTEILPAKKFYRAEEYHQQYLEKGGRFGSKQSAAKGCNDPIRCYG Homology
BLAST of Carg08044 vs. NCBI nr
Match: KAG6600207.1 (hypothetical protein SDJN03_05440, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030868.1 hypothetical protein SDJN02_04905 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 429.9 bits (1104), Expect = 1.2e-116 Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
BLAST of Carg08044 vs. NCBI nr
Match: XP_023514888.1 (peptide methionine sulfoxide reductase A3-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023514895.1 peptide methionine sulfoxide reductase A3-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 428.7 bits (1101), Expect = 2.8e-116 Identity = 202/203 (99.51%), Postives = 203/203 (100.00%), Query Frame = 0
BLAST of Carg08044 vs. NCBI nr
Match: XP_022943013.1 (peptide methionine sulfoxide reductase A3-like [Cucurbita moschata]) HSP 1 Score: 427.2 bits (1097), Expect = 8.1e-116 Identity = 201/203 (99.01%), Postives = 202/203 (99.51%), Query Frame = 0
BLAST of Carg08044 vs. NCBI nr
Match: XP_022988866.1 (peptide methionine sulfoxide reductase A3-like [Cucurbita maxima]) HSP 1 Score: 427.2 bits (1097), Expect = 8.1e-116 Identity = 201/203 (99.01%), Postives = 202/203 (99.51%), Query Frame = 0
BLAST of Carg08044 vs. NCBI nr
Match: XP_022141289.1 (peptide methionine sulfoxide reductase A1-like [Momordica charantia]) HSP 1 Score: 400.2 bits (1027), Expect = 1.1e-107 Identity = 188/203 (92.61%), Postives = 195/203 (96.06%), Query Frame = 0
BLAST of Carg08044 vs. ExPASy Swiss-Prot
Match: Q9SEC2 (Peptide methionine sulfoxide reductase OS=Lactuca sativa OX=4236 PE=2 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 9.7e-96 Identity = 161/204 (78.92%), Postives = 181/204 (88.73%), Query Frame = 0
BLAST of Carg08044 vs. ExPASy Swiss-Prot
Match: P54150 (Peptide methionine sulfoxide reductase A4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MSR4 PE=1 SV=2) HSP 1 Score: 335.5 bits (859), Expect = 4.2e-91 Identity = 153/203 (75.37%), Postives = 177/203 (87.19%), Query Frame = 0
BLAST of Carg08044 vs. ExPASy Swiss-Prot
Match: P54151 (Peptide methionine sulfoxide reductase OS=Brassica napus OX=3708 GN=PMSR PE=2 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 2.7e-90 Identity = 154/202 (76.24%), Postives = 171/202 (84.65%), Query Frame = 0
BLAST of Carg08044 vs. ExPASy Swiss-Prot
Match: Q9LY14 (Peptide methionine sulfoxide reductase A3 OS=Arabidopsis thaliana OX=3702 GN=MSRA3 PE=1 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 1.0e-89 Identity = 154/203 (75.86%), Postives = 174/203 (85.71%), Query Frame = 0
BLAST of Carg08044 vs. ExPASy Swiss-Prot
Match: Q9FKF7 (Peptide methionine sulfoxide reductase A1 OS=Arabidopsis thaliana OX=3702 GN=MSRA1 PE=2 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 5.1e-89 Identity = 153/204 (75.00%), Postives = 175/204 (85.78%), Query Frame = 0
BLAST of Carg08044 vs. ExPASy TrEMBL
Match: A0A6J1JIG1 (Protein-methionine-S-oxide reductase OS=Cucurbita maxima OX=3661 GN=LOC111486087 PE=3 SV=1) HSP 1 Score: 427.2 bits (1097), Expect = 3.9e-116 Identity = 201/203 (99.01%), Postives = 202/203 (99.51%), Query Frame = 0
BLAST of Carg08044 vs. ExPASy TrEMBL
Match: A0A6J1FW64 (Protein-methionine-S-oxide reductase OS=Cucurbita moschata OX=3662 GN=LOC111447878 PE=3 SV=1) HSP 1 Score: 427.2 bits (1097), Expect = 3.9e-116 Identity = 201/203 (99.01%), Postives = 202/203 (99.51%), Query Frame = 0
BLAST of Carg08044 vs. ExPASy TrEMBL
Match: A0A6J1CI65 (Protein-methionine-S-oxide reductase OS=Momordica charantia OX=3673 GN=LOC111011724 PE=3 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 5.1e-108 Identity = 188/203 (92.61%), Postives = 195/203 (96.06%), Query Frame = 0
BLAST of Carg08044 vs. ExPASy TrEMBL
Match: A0A6J1E4H9 (Protein-methionine-S-oxide reductase OS=Cucurbita moschata OX=3662 GN=LOC111430543 PE=3 SV=1) HSP 1 Score: 399.1 bits (1024), Expect = 1.1e-107 Identity = 185/203 (91.13%), Postives = 196/203 (96.55%), Query Frame = 0
BLAST of Carg08044 vs. ExPASy TrEMBL
Match: A0A6J1J8I9 (Protein-methionine-S-oxide reductase OS=Cucurbita maxima OX=3661 GN=LOC111482712 PE=3 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 3.3e-107 Identity = 184/203 (90.64%), Postives = 195/203 (96.06%), Query Frame = 0
BLAST of Carg08044 vs. TAIR 10
Match: AT4G25130.1 (peptide met sulfoxide reductase 4 ) HSP 1 Score: 335.5 bits (859), Expect = 3.0e-92 Identity = 153/203 (75.37%), Postives = 177/203 (87.19%), Query Frame = 0
BLAST of Carg08044 vs. TAIR 10
Match: AT5G07470.1 (peptidemethionine sulfoxide reductase 3 ) HSP 1 Score: 330.9 bits (847), Expect = 7.3e-91 Identity = 154/203 (75.86%), Postives = 174/203 (85.71%), Query Frame = 0
BLAST of Carg08044 vs. TAIR 10
Match: AT5G61640.1 (peptidemethionine sulfoxide reductase 1 ) HSP 1 Score: 328.6 bits (841), Expect = 3.6e-90 Identity = 153/204 (75.00%), Postives = 175/204 (85.78%), Query Frame = 0
BLAST of Carg08044 vs. TAIR 10
Match: AT5G07460.1 (peptidemethionine sulfoxide reductase 2 ) HSP 1 Score: 297.4 bits (760), Expect = 9.0e-81 Identity = 135/181 (74.59%), Postives = 155/181 (85.64%), Query Frame = 0
BLAST of Carg08044 vs. TAIR 10
Match: AT2G18030.1 (Peptide methionine sulfoxide reductase family protein ) HSP 1 Score: 104.0 bits (258), Expect = 1.5e-22 Identity = 61/152 (40.13%), Postives = 82/152 (53.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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