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Carg08016 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATCGATACCACTCCCTTCGAATTCGGCGGCGACGGTGACGGCGGCCGTCGATGCGGCAAGTCTTGCAGCAGACCTTCTAAGTACGACGTCGTCGGAGACATCTTCTTCGGTAAGGATGATATGAAGGAATACGCATGGGATGGAGCTTTCACTGAGAAAACGGTTCGATTCATTGAAAGTGAGTCCGCCATGAAAGCTCTGAGAAAGAGAAGCAATAGAAGGCCAGAAACATTCGATTGCTTTGAGTTCTTGAAATTCGTGTGGTGCTTCATATTTTAACTCTCTTCTTCTTCCACGAACATCGATTCGAATGTCTATATCCATCGATGAATTTCGATCTCCTTGTTTGTTTTCTTTCTCCTTCTTCTTCCTTGCTCGATCGATGCTGAATCATCGAAATTTTCCGAGCGAGGATTTGTAATTAATTAGAATTGTGATCTCTGGATCCGTCAATTGAAATGATTAAAATGCTTCAGATATCATCGATCTCTGCTCGTTTCAATCTGTTTGTATAGGAAGACGAGTGAAAATTGTGCTCTGAATCTGAATAATTTTCTTGGAATCCAAACAGTATTAGGTGAACCGAATGATGCCAAAATTTTGCTTGATCAACTCGAATTCCTTGGAAAGCAATTTGCATTCTACAATAATGGAGTTGTTGATAAATCTCTCTGTTCTTATTTTTCAATTGTCACACGTGAAAATCAAGTGTAAATATGAAGAAGAAGAACAACAACAAATTAGTGAAAAACAAAATTCAAATCCAATAAAACATATAAAATAATTCAAACATTTTTTGAAATTATGATTTGGAAAATGAACCCACCAAATTTGTCTGGACTAAAAAAAATAATAACTTTGACCAAACCAAATAATTTATTTGGTTTATTAGAGTGACCTTTAATTCGGAATAGCACGACCTAGCAACATTTTTATTAAAAATGTATAAAAAAAAAAAATTAGAGTGACTCCTAATTCGAAATGATATAGAATAAAAATTTTAACATATCGGGAAACGACCTTACTACTTATAATTTTAAAAGTTTAATTTAGTTTGCACGGACTAAATTTAATATAAATTATAATATGGTTAGAAAATTTTGATTTTTATTATAAAATAAAATAGAAAATAATAAATAAAAAAGAGGTGAGGAAAATAAAATTTATAAATTGGAGGTTTGACCGTCGGTGCATTTGGTTGTGTTGATGCTTTCCAAGTTTGATTGCCAAAGAGCTTATCATATTCCTTTTTCCTCCACTCATTTTTTTTATATATTTTTTAATATTATTATTATTATTATTGTAAACATTATAAACATTATTTTATTTCTCAAACTTCTGACCTATAGAGGATTCATTTTGTCTGTGCATCACTTGAAACCGACCATCCATTTTTAAATCACAATAATTCCAATAATCTCAAGTGTTATTTTATTTTTTTTATTTTTTCAATGTTTTTAATTTAAAAATAATTGTGGGAACCGAAATCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTACCTATTAGGAATGGGTTATTATTGCAAATTTATATTTCAGAAAATAAACAGAATTTTCCTTCCATTTTGGGCCTTGAATGGGCCCAACATGAATACAGGCCACGGCCCGTAATTTACTTAAAGCCCACATTCAAAAAAGCCTCGATACAATTTTTTTATTTTTTATTTTTAATTAGGTTAAATTATAAATGTTTGTGTATATTTTATTATTAAAATATTTAAAAGTATTTAATAAATTATATGTTTAACAATAAGCATAATTAAGTTCTCCATAAATCCTGTTATTACTAAGGTTTGTACATTTAAAATAAAGAACAATAAGAGGATTTTACACATTAATTAATCAGTTAAATTATGTAGCCGTTCGACGGTTTTCCACGGTCAACGTCAAACGGTCTTCAGAGCCGTTATCCGTCACGCCAGCTGTCTCGACCTGCGCGGATTTTACACAGACTATATATTTCTCCCGCAGTCACACTCTTATTCGGCACATTCTCATACTAGAATCAGAGCGCTCCATCAATGGCCTCTTCCCTTTTGAGTGTTCGTTGCCGAAATCAAACGGATCATTACCAGGCAATCGGAGAGCAGAATCGAAAGAAGTATCTCGCCTCGTCTCGGTGATGCAAATAGAGGTAATGTAACTTAATTTCAGCCGGCTATTCCGAATTAGGGGTTCATTGGAGAACTTAATCAAATGATTGTTCGTTTTTGTCGACACGTTTTGTATTTTTTCGTGGTTTCGATTACGGAGGATTAGGGCGTTTTTAGTAGGTTCATTGCTCCCATGGTAGCGTGATTATTATCTTGGACTCCTCGTTTCATTCCCTGTCATCTTCTATCTCTTCTCTGTGTGATGAGCCAATGGACAATCCTGATATTCAAATTTATGTATTGGCAGAAGAGAGCAGGACGACGAACTCTTATGTCATCGAGTTTTGTTCCGATAACAGAGAGGGGAAGAACAAGGCAGTTGTTCTTGATGAAGTGATTGCTTGGGCAACAGAAAAGCAGTTCGTCTTGTCATTGAGGCTGGTTGGATTTTCGCATCTGCTAGGAATACTGGTATGATTCCAACCCCAAGGCTGTGAAGTTGAATTTAAGTTTTTAGGGGGCGTGGGAAGTAAATGTTGTTTTGAAGTTTTTATTTTATTTTATTTATCATTTGTTGGCTGTGAAGTTGTGTATTGTAGCTTTAGCTTCTTTAGATGTTACCTCTGTTTGGATTATGTCAACATTTGACTGCAAGTAAGAACAGATCACAAAATATTGCTTGAAACATGTCTGGCAATGCTACTAATTCTTAGATTTCTCAATTACTCAACTAACATGTTTAGAAACGAAACTGAGAGGCCTTTCAGGGTGCATCTTCCTTCTTATATTCCTCAAGCTTAGTACAGCACAGAACATATTTAAGACAACACTTTTTGTGCAGGACACCCTAACTGAAGGCACTATATAGTGCCAGTTCACAAAAAGAGTCAATAGGTTTAACTTTATCTTGGATACCACATGATTCCTTTCGATCCAATATAAAAGCTTCTAGCAGAAAGGACCAACCTCTAGCAGAAAAATTACAATGCAGGAACAAAAGGTCAAAGATTTTCTCTTCTTTTTAGTACATACAGCAAGCATTTGGAACTTTTGGAGCTTTTCCATGAATGTCAAGGCAAAAAGATACACTCTCAGCTTCTACAAAGCGGATTACCCTCTAACAAACTGCCACAAACAATCATAACGAACATCGTGTATACACTTCGGTGATTTGGGGTCTACCAGTTTTCTGGCACTAATTTTCGTTAGGCTGTAATATGACATGACAACATCCTCTGATTAAGTGATATATGCAGATTCTTCCATAGATTTTTTTTTTTTACCAATTTGAACAACATTCAGTTTTTGCTGTTTTATATTTTCAATGTGTGAATTAACAGCCCTGCAAAATGAAGGACAAACTTTGTTTTATTTTCTATTAAGTTTACGAGTTAAAACTTTTTGACATTTTCTGTTTCTTATATTTTCTCTTAAAGGTAGAAGAAAGAATTTGATCAGCTGAAGAGGAGAATGGCAAAGTCTAAGAAATAATTTGGTCTGCTGAAGAGGAAAAGGTAAGAGTCTAAAAAAGATGTAAGCATCTGATGTGAGTGAATTTAAAATGATCTTGTTGCTTAAGAAGTTTTTGTGTCTTACTAGCTTGCTTCATTGGAAATTATTATATGACTGCAAGTCACCTGACAAGGTGCAAAAATGTTTGAATGAGATTTGGCAATTGAATAACACTATATCAGGAAGAGGGATCACACAAAGGAAGTTTTTTGATTAAGGAATGAGGGATCACACTAAAGTGAAGAATTGTTTGATTAAGGAATGAGGGATCACACAAAGGAAGTTTTTTAAATTTTAGAGGAAGGAAGCACTCGAAAAAAAGATTTGCTTCATTGATTGGTGATAAAGAAAAGTTAAAATGTATTTGGTCTATAAATTTGTTAATGGACAATTTTTTGGATATTTTTAGTTTGTGAAAGTTATGTGTGTAAGGAAGGAAAGAACAAAAGTTTGGATACAAGAATTGTGGGTTAAAGTAGTATGAGAATGGTGGATCAAGGACTATTCACTTTCATAAACGTTATGACCGAAAATGGAAGTTTGTTCAAATTGGAGATTTGAAAAGCTTATTTTGGAACCAAGAAATAGGATGTCATATGCCATGAGAAGTAGCAAAGAACTTGAATCAAGGACATGGAAGTGAAGAATTGTTGGAATCAAGGAATGAGGGATTACAAGAATGATGGTTATGTATGTAAAGAAGGAAGGACGATAAATTTGGACTTTCAAGTTTTTGATTATGGACAATCTTTTGGAGCCTTTTAGTTTAATGGTTGGATATGAAAGGACGAAGGGAAGATAAGTTTGGATACAAGAATTTTTGTTTAAAGCATAAGATTGGACTTGCATTTTTTTATTTTTTTATTAGTTGTTCTTTGGATCCATAATAATTTTTGAAGTAGTCTAATGAGGTTTAATTTGAGGGAAGTGAATCTAAGTACTATAACGAGGAAATGGAGTATAATGAGGAAATAGAGTAAAAGAATTTTCTTAAAGAAAAGTTTTGAGTGTATTTGGTCTATAAATTAGGTAATGGTCAATTTTTTGGATCTTTTGAGTTTGATAGTTACGTAGGTAAGGAAGATGAATTTGAATATGGGAGATGTGAGTATAAGATTGGACTCCCTAGATAATCTTTTGGATTTTTTTTGTTTAATGGTTATGCATGAAAGGACGGAAGATAGATAAGTTTGGATACAAGAATTTTGGTTTAAAATTTGAGATTGAACTTCAAATTTTGATAGATGATTTCTCGTCATTCTCGGGATAAAAAATTATGTTTGAGTTAATATTGTCCAATGAAATTTTATTTGGGGCAAGTGAATAAATTGGTATGATGATGAAATAAGGTACTCTCTTCGAACTGTCTATAGGAGCTTCGTTGAAGAAATAAATGAGATAGATATCCTTATTTAAAGAGGAAAAAGATCCACTTAGTGTGGTAGATGGAGGACTATATTTTTTAATAGACAATAATTTCTAAGGACAATTGGAGAGCAAAGAATTAATGGAATCAAAGAAGACGGGATAGCCGAAGGAAGTTTGTCAAATTTTAGGGAATAGGAAACACTAATAAAAGAATTTGCTTAATTGGTTCTAAACAGTAAAATTATTGGACGTTGAAGCAAAGGTAGGCTGTGCAATATCTCTCGATGCTTATGGAAAATAAGAAATATAAAGGCCAATTAGTAGGAGATTTCGGCAATATCTTCCTGAAGACGAATGTTGCAAAATGTGAGCATCATAAGGTTTTTGCAACTGTAACCTGCCAAGCAAAACAAGTGATCCTTGCAGCCGCTCAAGGTTTTAGTCCTTACTTTTATTTCATTCTTATTTATGTGAAAGTAATTAGTTTGAAGTCCTCTTAACTGTCATAGGTTTGGTTACAAAACCACACAAATAATTAAAAGTTGTGAGAGAATGGATTTAAGTGGTCAAAGATTATACGTTTAAAAATTTAACAAAAAGAATAAAGAATCATGTGTTTGACTTAAAAATAATTAAGGCTAATATTTACAATCGAAGAGAGAGGAGGAAGGAGTGGTTATTAAAGACGGTAAGAGAAAATATCTATGAAAATGAAAGCTTAGCATTTATTATTTGACTGTCATGTTCGAAAATATTAAAGATCAATGGGGCCATGACAGCAATTTCTCTGACAATTAGACCCAACAAAGTCCTTAAACACTTGGCCGACTTCTTTGACTCTTAATTCCTCCTCATATCTTCAAGTTTAGTTAAGCTGTAATTTTCCTATAAATCAACCAATAGAACTAGCACTTAAAACTAGCTCGAGTCCTCAAGAATGGTGTCCCTGAAGATGATTTCCTTTGTGTTGAAGCTCCTAGTTTGCTTTGCATTGCTTCTGATTGCCTCGCCCATTTCTGCAATGGACAATACTCCTCGTATTCGTAAGACTCTTTTTCTTCACGTGTTCAAGAAGTTCTACATTAAGAATTCTTATAAAATTTCTTGTTATCTAACTTTTAGAACTATTTTCAAAATTTAAGTTAAGTTTTGAAAACTAAAACCAAATAGTTGTCAGATGTAGTCTACATTTAGGAGTAGTGTGTTTGTAACTCTTTCATGCAGGTAGGTTCCCACTATATTAATTGTGTTAGTGAAGTGGGTGCTAAGTGGGTGTTTAGATATCTCAACATGTTAAAGTTGATAGTGGACGGACCTAAAAGCAAGAGTATGGTCTAGCCATTGATCATGGGTCAATGACGAGCTGAGCTATATATTTCTAGTGGCCAGCCCGTGGCGGCAGAAAACAAACTTGAGTTAAAATAAGAAATATACCCATGAATGGATACGTTATCTTACCTTTCTCTTCAAATAAATGCCAATCAAAGTTAACTTTGTTTATGACAAAGTGTGGCTTTAATTACCCCATTTCAGCTCTTACACATGCTACTACAATGGTAGCAGCAGGAATTCGCTCGGCTTCTTCCGCTTTTTATAGTAATACCTTACATCTGGTGGTACGGGTTTCAGGTAAGATGGGGATGGAGTACAAGCTTGTTGGAAAGGCTGTGGTGGTAGCAAAACCAGTGAGACAATTGTCTGCTGATTCCCCATGGGGTGGTGGTTATCACATCCCTTAG ATGGCCATCGATACCACTCCCTTCGAATTCGGCGGCGACGGTGACGGCGGCCGTCGATGCGGCAAGTCTTGCAGCAGACCTTCTAAGTACGACGTCGTCGGAGACATCTTCTTCGGTAAGGATGATATGAAGGAATACGCATGGGATGGAGCTTTCACTGAGAAAACGGTTCGATTCATTGAAACCGTTCGACGGTTTTCCACGGTCAACGTCAAACGGTCTTCAGAGCCGTTATCCGTCACGCCAGCTGTCTCGACCTGCGCGGATTTTACACAGACTATATATTTCTCCCGCAGTCACACTCTTATTCGGCACATTCTCATACTAGAATCAGAGCGCTCCATCAATGGCCTCTTCCCTTTTGAGTGTTCGTTGCCGAAATCAAACGGATCATTACCAGGCAATCGGAGAGCAGAATCGAAAGAAGTATCTCGCCTCGTCTCGGTGATGCAAATAGAGGTTCATTGCTCCCATGGTAGCGTGATTATTATCTTGGACTCCTCGTTTCATTCCCTGTCATCTTCTATCTCTTCTCTGTGTGATGAGCCAATGGACAATCCTGATATTCAAATTTATGTATTGGCAGAAGAGAGCAGGACGACGAACTCTTATGTCATCGAGTTTTGTTCCGATAACAGAGAGGGGAAGAACAAGGCAGTTGTTCTTGATGAAGTGATTGCTTGGGCAACAGAAAAGCAGTTCGTCTTGTCATTGAGGCTGGTTGGATTTTCGCATCTGCTAGGAATACTGCTCCTAGTTTGCTTTGCATTGCTTCTGATTGCCTCGCCCATTTCTGCAATGGACAATACTCCTCGTATTCGTAAGATGGGGATGGAGTACAAGCTTGTTGGAAAGGCTGTGGTGGTAGCAAAACCAGTGAGACAATTGTCTGCTGATTCCCCATGGGGTGGTGGTTATCACATCCCTTAG ATGGCCATCGATACCACTCCCTTCGAATTCGGCGGCGACGGTGACGGCGGCCGTCGATGCGGCAAGTCTTGCAGCAGACCTTCTAAGTACGACGTCGTCGGAGACATCTTCTTCGGTAAGGATGATATGAAGGAATACGCATGGGATGGAGCTTTCACTGAGAAAACGGTTCGATTCATTGAAACCGTTCGACGGTTTTCCACGGTCAACGTCAAACGGTCTTCAGAGCCGTTATCCGTCACGCCAGCTGTCTCGACCTGCGCGGATTTTACACAGACTATATATTTCTCCCGCAGTCACACTCTTATTCGGCACATTCTCATACTAGAATCAGAGCGCTCCATCAATGGCCTCTTCCCTTTTGAGTGTTCGTTGCCGAAATCAAACGGATCATTACCAGGCAATCGGAGAGCAGAATCGAAAGAAGTATCTCGCCTCGTCTCGGTGATGCAAATAGAGGTTCATTGCTCCCATGGTAGCGTGATTATTATCTTGGACTCCTCGTTTCATTCCCTGTCATCTTCTATCTCTTCTCTGTGTGATGAGCCAATGGACAATCCTGATATTCAAATTTATGTATTGGCAGAAGAGAGCAGGACGACGAACTCTTATGTCATCGAGTTTTGTTCCGATAACAGAGAGGGGAAGAACAAGGCAGTTGTTCTTGATGAAGTGATTGCTTGGGCAACAGAAAAGCAGTTCGTCTTGTCATTGAGGCTGGTTGGATTTTCGCATCTGCTAGGAATACTGCTCCTAGTTTGCTTTGCATTGCTTCTGATTGCCTCGCCCATTTCTGCAATGGACAATACTCCTCGTATTCGTAAGATGGGGATGGAGTACAAGCTTGTTGGAAAGGCTGTGGTGGTAGCAAAACCAGTGAGACAATTGTCTGCTGATTCCCCATGGGGTGGTGGTTATCACATCCCTTAG MAIDTTPFEFGGDGDGGRRCGKSCSRPSKYDVVGDIFFGKDDMKEYAWDGAFTEKTVRFIETVRRFSTVNVKRSSEPLSVTPAVSTCADFTQTIYFSRSHTLIRHILILESERSINGLFPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSFHSLSSSISSLCDEPMDNPDIQIYVLAEESRTTNSYVIEFCSDNREGKNKAVVLDEVIAWATEKQFVLSLRLVGFSHLLGILLLVCFALLLIASPISAMDNTPRIRKMGMEYKLVGKAVVVAKPVRQLSADSPWGGGYHIP Homology
BLAST of Carg08016 vs. NCBI nr
Match: KAG7030840.1 (hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 612.5 bits (1578), Expect = 2.1e-171 Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0
BLAST of Carg08016 vs. NCBI nr
Match: KAG6600176.1 (hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 492.7 bits (1267), Expect = 2.4e-135 Identity = 249/251 (99.20%), Postives = 250/251 (99.60%), Query Frame = 0
BLAST of Carg08016 vs. NCBI nr
Match: KAG6600177.1 (hypothetical protein SDJN03_05410, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 120.9 bits (302), Expect = 1.9e-23 Identity = 62/75 (82.67%), Postives = 68/75 (90.67%), Query Frame = 0
BLAST of Carg08016 vs. NCBI nr
Match: KAG7011932.1 (hypothetical protein SDJN02_26840, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 110.2 bits (274), Expect = 3.3e-20 Identity = 58/80 (72.50%), Postives = 62/80 (77.50%), Query Frame = 0
BLAST of Carg08016 vs. NCBI nr
Match: KAG7015246.1 (hypothetical protein SDJN02_22880, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 99.8 bits (247), Expect = 4.5e-17 Identity = 51/63 (80.95%), Postives = 53/63 (84.13%), Query Frame = 0
BLAST of Carg08016 vs. ExPASy TrEMBL
Match: A0A6J1ING1 (uncharacterized protein LOC111478006 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478006 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 3.7e-17 Identity = 80/207 (38.65%), Postives = 99/207 (47.83%), Query Frame = 0
BLAST of Carg08016 vs. ExPASy TrEMBL
Match: A0A6J1IL14 (uncharacterized protein LOC111478006 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478006 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.4e-16 Identity = 79/202 (39.11%), Postives = 97/202 (48.02%), Query Frame = 0
BLAST of Carg08016 vs. ExPASy TrEMBL
Match: A0A5A7UBI6 (Auxilin-related protein 2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G001210 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 2.6e-10 Identity = 59/127 (46.46%), Postives = 66/127 (51.97%), Query Frame = 0
BLAST of Carg08016 vs. ExPASy TrEMBL
Match: A0A5D3CNX7 (Auxilin-related protein 2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009260 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 2.6e-10 Identity = 59/127 (46.46%), Postives = 66/127 (51.97%), Query Frame = 0
BLAST of Carg08016 vs. ExPASy TrEMBL
Match: A0A0A0KKR1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524620 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 2.6e-10 Identity = 59/127 (46.46%), Postives = 66/127 (51.97%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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