Carg08015 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAACATAATCCGGGCGGTTCGGGGAAGTTTTATCTACCCATTACCCACCCATTTCAGTATTTCACAGTACAAAACAAACGCATCGAATTTGATTACTGCGGCTATGGCTTATATCCGTTTCTTCTAGTCCGGGGAAGATTTCGGGTCGGTTGACTCTTCAAGTTCACTAAATCTTGAAGGCGAAATCAGATCTTCGCTGATTTTGCGAAGCGTCTCCGGATTTGTTGGGCGAGTTCATTTTTCTGCTGCGGTCGGTAAGAATTGTGTATATTTTTCTGTTTTGGTGATCTTTGCAATTTTTTTAGTCCCAGGAAAGGATTGGTAGAAGAGGTCGATTTTTTTTCTTTTCTCCTAGGTTTGATTCTTATAAATCGTTTCTTCCGTTGTCGAACTGTTCAATGTCTTTGAAATGATGGGAAATTGTTGGATTTGGATTCGAGAAATAAGATGTGGAGTTCTTGATTTGTTGATTTTTTTTTGTCGGTGGACGATCTCAGATGGGGGATGGGGCGGCGCCTTCTCGGTATGTGAAATTGACGAAAGATCAAGCGCCCTTGGAAGAAATCAAGCCAGGGGAGCTTAATCAGCCCATTGAAGTTCCTCAGGTTTTCTACTTTTCTAGGAGCAATTTTTGCCGCTGTTTCTTTCTCATAATACCTCTCTGTAGATTCGAGCTTTGCTGTTGATATCATTGGTATTTGTTCTTCCGGTTTACAATGTCCAGAGCATATATGCATATCACTTCACGATCTGGTAGTATTGTTTGTTGATCCAATTGTGAGAAGATTCACTTGTAGTGGATGAACTGCTCTAGAAGTTGTGCATTTCGATGTTTTTTACACCAAATGTTGTAGGGTGAAGCTTTTATTTAATAAGGTTAGTAAATGTTAAACGATTGGGGGTGGCTAAAACTCGACGATGTTCCCACCGTGCCTGTTTATTGTGTGTTAACAATGTGCTAGTGCAACATCCCAAGCCCACCGCAAGCAGATATTGTTCTTTTTAGGCTTTCTCTTCTGGGCTTTCCCTCAAGGTTTTAAAACGCGTTAGGGAGAGGTTTCCACGCCCTTGTAAAGCATGTTTCGTTCCCATCTCCAACCGATGTAGGATCTCACAGCTAGCTACATGCATACCTGTTAAGCTGTTTGTATGCTAGGAGTTGTTAGGTTGTTGAAGTGGTGACTGTAGAGAAATACTCGATTGAAGCTTCAAGCGCCTTGTTGGCCCGTTTTATCTGATATTGACCTTTTTCGACCTGTGCTCGTGTCTTCCATTACTCTGGGACATTTTTTGTTTTCTTGATTTGCAGCTGCTCGACCTTTTCTATATGCATACTATGTGTAATTTATGGAATTTTGGTAGTAACTTTCTGTAGGAATATCCAAGGAAAACTAAAAAAACATGCCATTTATAATGAAATTCTCTTGACTACTCTCAGTTAAATGTTCGAAAATGCAATGAGTGTGGACAGCCACTCCCTGACAGCTTTGAACCTCCAGCAGATGAACCTTGGACAACTGGGATTTTTGGCTGTGCTGAAGATCCACAAAGTTGTAAGTTTCCATATGTATAGTATTCTTCTTAATCTACGGTTCTCAGGTCGAATAACGGTGAACAGCTTTGCAATATGATAATTGTTTGTTTGTTCGTGCGATTATTCGTAGAACTAAGGGTTATCAGAAACACATTTTGAAAGTTGAAACTTATGCAATTATGCCATTAGCACTACTCATTTCAAGGTCTGCAAGAGCAAGCTGTTGTCGTAACTTGTTTTTGTCTTCGTACGTGTGCCTATTTCGTGTATACAGGCTGGACTGGATTGTTCTGTCCATGTGTTTTGTTTGGGCGCAATGTTGAAAGCTTGAGAGATGATGATATGGACTGGACAAGGCCGTGCGTTTGTCATGCTATATTTGTTGAAGGTGGCATTGCCTTGGCGACAGCAACTGCAGCGTTCCATTGCATCGAACCAAACACGACGTTTCTCATTTGTGAGGGATTATTGTTTACCTGGTGGATGTGTGGTATATACACTGGACTCGTTCGCCAATCTTTGCAGAAGAAGTATCATCTTAAGGTAAATCTTCTATTAATGTGCTTATCAATCTTGATGTATTAAATGTGGACAATCTTCTGTGGGTTCGGACTCCGAAAATAGCTGGATGCCAACTTTTTTGCTTCACTTCTAGAATTGTTTGCCTTTTGTTTCTGTAGTTCCGAAAGCGTCATCTCGAATGTTTTGAGGAGAAAATCTCTGTTTGTAAAGAGGATTTTGTGGATCGCATTGGATATCTAGTTTAAAACTTTTTCATTCTCTTACGTTGATATGTCAACTCGTTCAAGCCCGAAAAATATTAATATATTTTTGTAACAGCCAAAGCTCGCTAGGAGATATTTTCTCTTTGGGTAGGTTTTCACACCTTTATAAAGAATGCTTCGTTCTCCTCTCCAACCAACGTGAGTTTTCACAATCCACCCACCTTCAGGGCCCAGCGTCCTCGCTGACACTCATTTCTCTCTCCAATCGACGTGGGATCCCACAACCCACCCAGACCCAGCGTCTTCACTGACACTCGTTTCTCTCTCCAATCGATGTAGGATCTTACAATCCACTCCCTCCGGGGGATGACCCAAGTGTTCTCAATGACACTCGTCCTCTCTCCAATCGATGTGGGATCTCACAATCCACCCCTTTGGGGCCAGCATCCTCGCTGACACACTGCCCGGTGTCTGGCTCTAATACCACTTGAAACTGTCCAAGCCCACCGCTAGCAGATATTGTCCTCTTTGAGCTTTTCCCTTTCGGGATTCCTCTCAAGGTTTTTAAAACATCTCTATTAGGGGGAAGTTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTCCCTAACCGATGTGAGATTTCACAATTTTCCTATAATTGTCATGCATTGGAGTATTGGCCCGGAGGTTGAAAGAATAACATTACTCCGTGGGGGGCACTTCGAAGAGCTCGATGTGCCCATACTGTCTATATAGCAAGGGGCTAAGGGTGAGAGAAGAGACAGGATCTCAAGTTACGCTAGAGAAACTCATATCATGGGGCGTCACATAGGATTTAGAACAACCATTCCCCCTTCTTTAAACAAATGTGTGGTTAGTTAGCTTTCCAAAACTGAGTACTGTCATATGCTAGTGTAGTGTAGTACATGCTGTATGCTAATCGTTGCAGTGCTGATTGCAGAACTCCCCATGTGATCCTTGCATGACACATTGCTGCCTGCACTGGTGCGCTCTTTGTCAAGAACACAGGGAGATGAAGGGGCGTCTAGCCGATAACTTTGCAGTTCCAATGACTATCGTGAACCCGCCACCCGTTCAAGAAATGAAGTCGGAAAACGAAGGTGAAGGAGGAACCACTTCAACTTCCAGCACCAACGGGCAGACCAATCTGGAAATGCAGGCATTGTAG AAACATAATCCGGGCGGTTCGGGGAAGTTTTATCTACCCATTACCCACCCATTTCAGTATTTCACAGTACAAAACAAACGCATCGAATTTGATTACTGCGGCTATGGCTTATATCCGTTTCTTCTAGTCCGGGGAAGATTTCGGGTCGGTTGACTCTTCAAGTTCACTAAATCTTGAAGGCGAAATCAGATCTTCGCTGATTTTGCGAAGCGTCTCCGGATTTGTTGGGCGAGTTCATTTTTCTGCTGCGGTCGATGGGGGATGGGGCGGCGCCTTCTCGGTATGTGAAATTGACGAAAGATCAAGCGCCCTTGGAAGAAATCAAGCCAGGGGAGCTTAATCAGCCCATTGAAGTTCCTCAGTTAAATGTTCGAAAATGCAATGAGTGTGGACAGCCACTCCCTGACAGCTTTGAACCTCCAGCAGATGAACCTTGGACAACTGGGATTTTTGGCTGTGCTGAAGATCCACAAAGTTGCTGGACTGGATTGTTCTGTCCATGTGTTTTGTTTGGGCGCAATGTTGAAAGCTTGAGAGATGATGATATGGACTGGACAAGGCCGTGCGTTTGTCATGCTATATTTGTTGAAGGTGGCATTGCCTTGGCGACAGCAACTGCAGCGTTCCATTGCATCGAACCAAACACGACGTTTCTCATTTGTGAGGGATTATTGTTTACCTGGTGGATGTGTGGTATATACACTGGACTCGTTCGCCAATCTTTGCAGAAGAAGTATCATCTTAAGAACTCCCCATGTGATCCTTGCATGACACATTGCTGCCTGCACTGGTGCGCTCTTTGTCAAGAACACAGGGAGATGAAGGGGCGTCTAGCCGATAACTTTGCAGTTCCAATGACTATCGTGAACCCGCCACCCGTTCAAGAAATGAAGTCGGAAAACGAAGGTGAAGGAGGAACCACTTCAACTTCCAGCACCAACGGGCAGACCAATCTGGAAATGCAGGCATTGTAG ATGGGGGATGGGGCGGCGCCTTCTCGGTATGTGAAATTGACGAAAGATCAAGCGCCCTTGGAAGAAATCAAGCCAGGGGAGCTTAATCAGCCCATTGAAGTTCCTCAGTTAAATGTTCGAAAATGCAATGAGTGTGGACAGCCACTCCCTGACAGCTTTGAACCTCCAGCAGATGAACCTTGGACAACTGGGATTTTTGGCTGTGCTGAAGATCCACAAAGTTGCTGGACTGGATTGTTCTGTCCATGTGTTTTGTTTGGGCGCAATGTTGAAAGCTTGAGAGATGATGATATGGACTGGACAAGGCCGTGCGTTTGTCATGCTATATTTGTTGAAGGTGGCATTGCCTTGGCGACAGCAACTGCAGCGTTCCATTGCATCGAACCAAACACGACGTTTCTCATTTGTGAGGGATTATTGTTTACCTGGTGGATGTGTGGTATATACACTGGACTCGTTCGCCAATCTTTGCAGAAGAAGTATCATCTTAAGAACTCCCCATGTGATCCTTGCATGACACATTGCTGCCTGCACTGGTGCGCTCTTTGTCAAGAACACAGGGAGATGAAGGGGCGTCTAGCCGATAACTTTGCAGTTCCAATGACTATCGTGAACCCGCCACCCGTTCAAGAAATGAAGTCGGAAAACGAAGGTGAAGGAGGAACCACTTCAACTTCCAGCACCAACGGGCAGACCAATCTGGAAATGCAGGCATTGTAG MGDGAAPSRYVKLTKDQAPLEEIKPGELNQPIEVPQLNVRKCNECGQPLPDSFEPPADEPWTTGIFGCAEDPQSCWTGLFCPCVLFGRNVESLRDDDMDWTRPCVCHAIFVEGGIALATATAAFHCIEPNTTFLICEGLLFTWWMCGIYTGLVRQSLQKKYHLKNSPCDPCMTHCCLHWCALCQEHREMKGRLADNFAVPMTIVNPPPVQEMKSENEGEGGTTSTSSTNGQTNLEMQAL Homology
BLAST of Carg08015 vs. NCBI nr
Match: KAG6600175.1 (Cell number regulator 6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 524.6 bits (1350), Expect = 4.4e-145 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
BLAST of Carg08015 vs. NCBI nr
Match: XP_022942562.1 (cell number regulator 6-like [Cucurbita moschata] >XP_022942563.1 cell number regulator 6-like [Cucurbita moschata] >XP_022967136.1 cell number regulator 6-like [Cucurbita maxima] >XP_022967163.1 cell number regulator 6-like [Cucurbita maxima] >XP_023515606.1 cell number regulator 6-like [Cucurbita pepo subsp. pepo] >XP_023515611.1 cell number regulator 6-like [Cucurbita pepo subsp. pepo] >KAG7030839.1 Cell number regulator 6 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 524.6 bits (1350), Expect = 4.4e-145 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
BLAST of Carg08015 vs. NCBI nr
Match: XP_008439084.1 (PREDICTED: cell number regulator 6 [Cucumis melo] >XP_008439085.1 PREDICTED: cell number regulator 6 [Cucumis melo] >KAA0067666.1 cell number regulator 6 [Cucumis melo var. makuwa] >TYK23670.1 cell number regulator 6 [Cucumis melo var. makuwa]) HSP 1 Score: 501.1 bits (1289), Expect = 5.2e-138 Identity = 226/239 (94.56%), Postives = 234/239 (97.91%), Query Frame = 0
BLAST of Carg08015 vs. NCBI nr
Match: XP_022141152.1 (cell number regulator 6 [Momordica charantia]) HSP 1 Score: 500.0 bits (1286), Expect = 1.2e-137 Identity = 226/239 (94.56%), Postives = 233/239 (97.49%), Query Frame = 0
BLAST of Carg08015 vs. NCBI nr
Match: XP_004148145.1 (cell number regulator 6 [Cucumis sativus] >KGN57264.1 hypothetical protein Csa_011373 [Cucumis sativus]) HSP 1 Score: 499.6 bits (1285), Expect = 1.5e-137 Identity = 225/239 (94.14%), Postives = 234/239 (97.91%), Query Frame = 0
BLAST of Carg08015 vs. ExPASy Swiss-Prot
Match: B6SGC5 (Cell number regulator 6 OS=Zea mays OX=4577 GN=CNR6 PE=2 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 1.9e-98 Identity = 157/214 (73.36%), Postives = 182/214 (85.05%), Query Frame = 0
BLAST of Carg08015 vs. ExPASy Swiss-Prot
Match: Q8S8T8 (Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana OX=3702 GN=PCR10 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.4e-21 Identity = 60/167 (35.93%), Postives = 86/167 (51.50%), Query Frame = 0
BLAST of Carg08015 vs. ExPASy Swiss-Prot
Match: B4FF80 (Cell number regulator 5 OS=Zea mays OX=4577 GN=CNR5 PE=2 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 5.0e-19 Identity = 52/152 (34.21%), Postives = 71/152 (46.71%), Query Frame = 0
BLAST of Carg08015 vs. ExPASy Swiss-Prot
Match: B6TYV8 (Cell number regulator 2 OS=Zea mays OX=4577 GN=CNR2 PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.4e-13 Identity = 44/152 (28.95%), Postives = 66/152 (43.42%), Query Frame = 0
BLAST of Carg08015 vs. ExPASy Swiss-Prot
Match: B6TZ45 (Cell number regulator 1 OS=Zea mays OX=4577 GN=CNR1 PE=2 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.2e-12 Identity = 43/132 (32.58%), Postives = 59/132 (44.70%), Query Frame = 0
BLAST of Carg08015 vs. ExPASy TrEMBL
Match: A0A6J1HR70 (cell number regulator 6-like OS=Cucurbita maxima OX=3661 GN=LOC111466610 PE=4 SV=1) HSP 1 Score: 524.6 bits (1350), Expect = 2.1e-145 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
BLAST of Carg08015 vs. ExPASy TrEMBL
Match: A0A6J1FV53 (cell number regulator 6-like OS=Cucurbita moschata OX=3662 GN=LOC111447562 PE=4 SV=1) HSP 1 Score: 524.6 bits (1350), Expect = 2.1e-145 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
BLAST of Carg08015 vs. ExPASy TrEMBL
Match: A0A1S3AYI8 (cell number regulator 6 OS=Cucumis melo OX=3656 GN=LOC103483979 PE=4 SV=1) HSP 1 Score: 501.1 bits (1289), Expect = 2.5e-138 Identity = 226/239 (94.56%), Postives = 234/239 (97.91%), Query Frame = 0
BLAST of Carg08015 vs. ExPASy TrEMBL
Match: A0A5A7VMB6 (Cell number regulator 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00360 PE=4 SV=1) HSP 1 Score: 501.1 bits (1289), Expect = 2.5e-138 Identity = 226/239 (94.56%), Postives = 234/239 (97.91%), Query Frame = 0
BLAST of Carg08015 vs. ExPASy TrEMBL
Match: A0A6J1CJ25 (cell number regulator 6 OS=Momordica charantia OX=3673 GN=LOC111011615 PE=4 SV=1) HSP 1 Score: 500.0 bits (1286), Expect = 5.6e-138 Identity = 226/239 (94.56%), Postives = 233/239 (97.49%), Query Frame = 0
BLAST of Carg08015 vs. TAIR 10
Match: AT2G45010.1 (PLAC8 family protein ) HSP 1 Score: 349.4 bits (895), Expect = 2.3e-96 Identity = 162/245 (66.12%), Postives = 194/245 (79.18%), Query Frame = 0
BLAST of Carg08015 vs. TAIR 10
Match: AT5G51400.1 (PLAC8 family protein ) HSP 1 Score: 347.4 bits (890), Expect = 8.9e-96 Identity = 155/240 (64.58%), Postives = 188/240 (78.33%), Query Frame = 0
BLAST of Carg08015 vs. TAIR 10
Match: AT2G45010.2 (PLAC8 family protein ) HSP 1 Score: 280.0 bits (715), Expect = 1.8e-75 Identity = 126/198 (63.64%), Postives = 154/198 (77.78%), Query Frame = 0
BLAST of Carg08015 vs. TAIR 10
Match: AT2G40935.1 (PLAC8 family protein ) HSP 1 Score: 104.8 bits (260), Expect = 1.0e-22 Identity = 60/167 (35.93%), Postives = 86/167 (51.50%), Query Frame = 0
BLAST of Carg08015 vs. TAIR 10
Match: AT2G40935.3 (PLAC8 family protein ) HSP 1 Score: 84.7 bits (208), Expect = 1.1e-16 Identity = 52/152 (34.21%), Postives = 76/152 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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