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Carg08009 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCCGGTTTCCGGTTTATATTATTCTAAACCGAGGTTTGATTGGGCCAGATCCGAACCAAACCAAACCTCGTGCACACCCCGCTAAAAAGGTCCGGAAAGAAGGAAAGCGTCTGTCGTGGGTGGAAGTCGAAGGTCCGAATTTTCGGAGTCCAGTGCCCACGAAGAAGATGAATCAAAGGAAATCGGCTGCTGGAAGGCCGTCTGGAACCGATGGTTCTGATTTCGCCTATCGCATGGTTGTCGATTCTCGTAAGTTTCCTCACTTTTTTCTCCTAATTTTCATTTGGCTGTTGAGCAACCATGTGATGTATAGAATAAAAAGTTGATCGATATGGAGAAGAAAAACTTCGTTGTTCGTCTTTTTTTGGTCCTCATTGATGTCCTATTTCTGCTCAGCTCTTCGGCTTAGTGGAAGAGGATAGTTTGCTCTAGTTTTTCAGTCATTGCAACACGAAATTGGATTTGTTTGGCTATTTTATTTGTCTTATTGGAATCAACTTCGGTTCTTATGACGCGTTACTCTAATTATAGGGTATCAAAAGGTTGCCAAAGGAAAATCTCGTTTATCTACGCTGATTTTAAATCAGGTACACGCATTATATTGCTTTTACAGAAAATTTTGTTCACATCTTCTAGCGTGTTTTGCTTCATTGTTGTTTATGAACGAAAAAAAATAAAAAATGCAATATCTTCTAATTGATCTCTCGATGCTTTTACTTTTGCTTCTTGCCTTTGTTATCACGAAATCCTCCAAACTTTGCTTTAATTTATGGCAAACAGTAGAAAAGTAGATCTATTAGTGAGTTTTATGTTCGTATTTGAGGGAAAAACTCTTTAAAGCCCATAAAAATTGGGCGACATTTTCCATCAGGTATTAGTCTGATAAAGCATTTCTTTATGTGAATGACTTCTACCAGGACATCCAGATCAGTGATTTCCTAGTTCTTGTGATGTGAGTTTAATGTAGAGCTGACCTTAGGAGAGATTTATTGATTCCTGATGTTGTTTACCTTAGTATCATGAAGGCCTATAATTTGTGATCAATAAATTTTCATGTAATAGTTGGTTCAATCTTTTCTTCTACTTCTCTCAACTCTGATGTGACCGACTGGAATTTCTTTCTTGTTTACTAATTTTCCTAGTTCCTCTATTGAAATTTGTAAATGCTAAAGATTTTAGAGGGAGACCCTGATAAACTTGCTATTTCATGGGAGCCGTTGCTTATCTCTGGACCTCTCATGACTGTTTGTTGTTTTACCCTAATTGGGTCTGTTGGATTATACTGCAGGTTATCATTCAGTTATGTGGAATGGTCTACTTGTTTATATTGACATCAAAGAGGGAGACTCCAGATAAACTTGCAATTTCATCTGCTGTCATTGGTTTCCTTTCGTTGTTCATAGGAGAACTAGGTTGCTAATTATATTATTACTTCTTTTTTTAGCTAACTTACACATCTTTGTCTGTTTCAACTGTAATGATTGACTTTTTTGCCAATGTTCTATTGAAGGTCGTAGGCGTAGCCGTGCAAGTTTCATGAAAGCTTATATGATTGCATCATCTCTTGCGCTCCTACTACTTTTTGTTAATGTCTCTCAGGGAAATTATACGTTTGAGGTAAGGAAAACTGATTCATTCTCTAATTTGATGCTCTAAATAAGAGAGAAATCAAATGAAAATGTTATGGAATTGTTATTTATGCTGACTAGTCGAAGAAGTAATAGCAATGAGACCGGGGAATTGAATTCGATGAAAATTAAAGTAGGCTTTATATAAGTGTAGTTGTCGAGACTCCAAAGATTCATCGTTTCTTTGTCACCATTGGCATCTATACATGAAAATGGTTGGGAGCTTCAATTTGATTGGTTGATTATATTTATAACTCTTCGGGCTTTGATCATTAACTTCCGTGGGGTGATGTCTGTTCCGAATGCTTTATTCTCCATTCTGACTGAACTTTGAATCTCATGAACCATTTAGGGAATTGAGGATCTGAGTAATTGGCAGACAAAGAAGCTCGAACTTTTGGAGACGATCCGCATTTTTCTTGGTGGGTTGTTTATTACATGCTATCTTCATTGATTTTCAGAGTCAATAAGTATGAACTAACGCAGGAATTGTGATATGCCTCCATACAGGAGCCCTGCTTCAGATATTTGCAATCAGGACAGTGATTTCCCTCGTTGGTAACATGTCTCTTCCAAAACGCTCTTCTTAAGTTATTCTGTACCAAACTGTTGTCCTTTAACGACCAGAAAGTCTCTTTATTGTTACTTTTCGATTCTGAATCCAAAAATAGTTCAAAAGTAAGTTTGGATTTCTCTTTTCTCGATAATTATGTAAGAAAGGCTCCACTTAGGTTGGATCCTACAGCGATTTTGATGAAATTGTAGGTTAAAATTGACTTTTGAGTACTTTTTTTTTTTT ATGTGCCGGTTTCCGGTTTATATTATTCTAAACCGAGGTTTGATTGGGCCAGATCCGAACCAAACCAAACCTCGTGCACACCCCGCTAAAAAGGTCCGGAAAGAAGGAAAGCGTCTGTCGTGGGTGGAAGTCGAAGGTCCGAATTTTCGGAGTCCAGTGCCCACGAAGAAGATGAATCAAAGGAAATCGGCTGCTGGAAGGCCGTCTGGAACCGATGGTTCTGATTTCGCCTATCGCATGGTTGTCGATTCTCGGTATCAAAAGGTTGCCAAAGGAAAATCTCGTTTATCTACGCTGATTTTAAATCAGGTTATCATTCAGTTATGTGGAATGGTCTACTTGTTTATATTGACATCAAAGAGGGAGACTCCAGATAAACTTGCAATTTCATCTGCTGTCATTGGTTTCCTTTCGTTGTTCATAGGAGAACTAGGTCGTAGGCGTAGCCGTGCAAGTTTCATGAAAGCTTATATGATTGCATCATCTCTTGCGCTCCTACTACTTTTTGTTAATGTCTCTCAGGGAAATTATACGTTTGAGGGAATTGAGGATCTGAGTAATTGGCAGACAAAGAAGCTCGAACTTTTGGAGACGATCCGCATTTTTCTTGGAGCCCTGCTTCAGATATTTGCAATCAGGACAGTGATTTCCCTCGTTGGTAACATGTCTCTTCCAAAACGCTCTTCTTAAGTTATTCTGTACCAAACTGTTGTCCTTTAACGACCAGAAAGTCTCTTTATTGTTACTTTTCGATTCTGAATCCAAAAATAGTTCAAAAGTAAGTTTGGATTTCTCTTTTCTCGATAATTATGTAAGAAAGGCTCCACTTAGGTTGGATCCTACAGCGATTTTGATGAAATTGTAGGTTAAAATTGACTTTTGAGTACTTTTTTTTTTTT ATGTGCCGGTTTCCGGTTTATATTATTCTAAACCGAGGTTTGATTGGGCCAGATCCGAACCAAACCAAACCTCGTGCACACCCCGCTAAAAAGGTCCGGAAAGAAGGAAAGCGTCTGTCGTGGGTGGAAGTCGAAGGTCCGAATTTTCGGAGTCCAGTGCCCACGAAGAAGATGAATCAAAGGAAATCGGCTGCTGGAAGGCCGTCTGGAACCGATGGTTCTGATTTCGCCTATCGCATGGTTGTCGATTCTCGGTATCAAAAGGTTGCCAAAGGAAAATCTCGTTTATCTACGCTGATTTTAAATCAGGTTATCATTCAGTTATGTGGAATGGTCTACTTGTTTATATTGACATCAAAGAGGGAGACTCCAGATAAACTTGCAATTTCATCTGCTGTCATTGGTTTCCTTTCGTTGTTCATAGGAGAACTAGGTCGTAGGCGTAGCCGTGCAAGTTTCATGAAAGCTTATATGATTGCATCATCTCTTGCGCTCCTACTACTTTTTGTTAATGTCTCTCAGGGAAATTATACGTTTGAGGGAATTGAGGATCTGAGTAATTGGCAGACAAAGAAGCTCGAACTTTTGGAGACGATCCGCATTTTTCTTGGAGCCCTGCTTCAGATATTTGCAATCAGGACAGTGATTTCCCTCGTTGGTAACATGTCTCTTCCAAAACGCTCTTCTTAA MCRFPVYIILNRGLIGPDPNQTKPRAHPAKKVRKEGKRLSWVEVEGPNFRSPVPTKKMNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLSTLILNQVIIQLCGMVYLFILTSKRETPDKLAISSAVIGFLSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNYTFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSLPKRSS Homology
BLAST of Carg08009 vs. NCBI nr
Match: KAG7030833.1 (hypothetical protein SDJN02_04870, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 444.1 bits (1141), Expect = 7.2e-121 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0
BLAST of Carg08009 vs. NCBI nr
Match: KAG6600169.1 (hypothetical protein SDJN03_05402, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 439.9 bits (1130), Expect = 1.4e-119 Identity = 225/229 (98.25%), Postives = 228/229 (99.56%), Query Frame = 0
BLAST of Carg08009 vs. NCBI nr
Match: XP_023551542.1 (uncharacterized protein LOC111809297 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 316.2 bits (809), Expect = 2.3e-82 Identity = 167/172 (97.09%), Postives = 170/172 (98.84%), Query Frame = 0
BLAST of Carg08009 vs. NCBI nr
Match: XP_022943094.1 (uncharacterized protein LOC111447929 [Cucurbita moschata]) HSP 1 Score: 315.5 bits (807), Expect = 3.9e-82 Identity = 168/172 (97.67%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of Carg08009 vs. NCBI nr
Match: XP_022989151.1 (uncharacterized protein LOC111486305 [Cucurbita maxima]) HSP 1 Score: 312.8 bits (800), Expect = 2.5e-81 Identity = 165/172 (95.93%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of Carg08009 vs. ExPASy TrEMBL
Match: A0A6J1FTA0 (uncharacterized protein LOC111447929 OS=Cucurbita moschata OX=3662 GN=LOC111447929 PE=3 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 1.9e-82 Identity = 168/172 (97.67%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of Carg08009 vs. ExPASy TrEMBL
Match: A0A6J1JJ87 (uncharacterized protein LOC111486305 OS=Cucurbita maxima OX=3661 GN=LOC111486305 PE=3 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 1.2e-81 Identity = 165/172 (95.93%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of Carg08009 vs. ExPASy TrEMBL
Match: A0A5D3DK80 (Protein jagunal-like protein 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00450 PE=3 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 4.6e-73 Identity = 149/190 (78.42%), Postives = 165/190 (86.84%), Query Frame = 0
BLAST of Carg08009 vs. ExPASy TrEMBL
Match: A0A1S3AXI9 (uncharacterized protein LOC103483988 OS=Cucumis melo OX=3656 GN=LOC103483988 PE=3 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 5.3e-69 Identity = 141/172 (81.98%), Postives = 155/172 (90.12%), Query Frame = 0
BLAST of Carg08009 vs. ExPASy TrEMBL
Match: A0A6J1CJ02 (uncharacterized protein LOC111011431 OS=Momordica charantia OX=3673 GN=LOC111011431 PE=3 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 6.9e-69 Identity = 145/174 (83.33%), Postives = 155/174 (89.08%), Query Frame = 0
BLAST of Carg08009 vs. TAIR 10
Match: AT5G51510.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1352 (InterPro:IPR009787); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 134.8 bits (338), Expect = 8.7e-32 Identity = 82/172 (47.67%), Postives = 108/172 (62.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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