Carg08007 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08007
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pentatricopeptide repeat-containing protein
Location	Carg_Chr04: 1709330 .. 1713166 (+)
RNA-Seq Expression	Carg08007
Synteny	Carg08007

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTCAGGTGGTCCTGGAAGTGGTAAAGGTACACAATGTATGAAGATAGTTGAGAACTTTGGATTTACACATTTGAGTGCTGGAGATATATTAAGGAGGGAAATAGCTTCGAATAGTGCTGATGGGTAATTATGTCTCGTTTGCATCTATTGAAAAAACTTACAAATCCATCTAGCCTTTGATGATGTCTCTTGATTGTGAGTTTCTATTTTCAGTACCATGATTCTTGACACAATTAAGGAAGGAAAAATAGTTCCTTCAGAATTGACAGTGAAACTTATTCAAAAGGAAATGGAATCAAGTGACAATTATAAATTTCTCATTGATGGGTTCCCACGCAGTGAGGATAACAGGATTGCATTTGAACAAATTGTGAGTTTCTTCTGTACTCTTATTCCATTCAGTTCTTTCTTTATTTACTTCGGTGAAAAAAAATTCTTTTAAGAACTTTAAGAAACAAAATCAACACTGAGATCAACAAGGGAAAATGACAAACTGTTCAAATGTAGATCGGAGCAGAACCAGATATTGTACTCTTCTTTGACTGTCCAGAAGACGAAATGATGAAGCGTGTGCTCAATCGTAATCAGGTAGCTGACATGGGTTCAATCTTTCCTGCTTCCAAATCGCCATCATCATAGTATATCTCAAAATGACAAATTTGCAGGGAAGAGTTGATGACAACGTTGACACAATCAAGAAAAGGCTAAAAGTTTTTTCGGCATTGAATCTCCCTGTAGTCAAATATTATCTGGAGAGGGGAAAGCTTTACAAGGTATGTTATTGGTTGATTTTTCAACTCAAATCCTTCTATTGTTGGTGCCTTGCTGCTATTGAATAGATGCTCATCACTTGCTAGACCACGTGTGAGATCCCACATCGGTTGGGAAGGAGAACGAAACACCATTTATAAGGGTGTAGAAACCTCTCCTTAGCAGACGCGTTTTAAAGTCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAAGACAATATTTGTTAGCGGTGGGCTTGGGCCGTTACGCCACGTTTCTAAATTCTTGTTTCTTTCTATGTAAACTTGGTTTTTTGACCCAAAAAATGTTGCAGATAAATGCAGTTGGAACGGTGGATGAAATATACAAACAAGTTTATCCACTTTTTGCACAATTTAATTTTGAGGTATTTGGTTTCTGTTTCCACCTTCAAGTCTTTCCTATACGATTGGTAAAAACTTTTTAAACTTGAATCTTAGCGTATGCCGTTTTCTCCCATCATTCATGCTTTCAGTTCTGATATCGACTCAATGCTGTAGTCCATTGCTGATCATTGTTTAATCATTTTTGTTCAGCAGCAGGTATGAGCAAGGAAGTGTTGGGCAATCTTCTCATGGATAACAAACATGGAGCACGGAAAGACCCTGGTTCGTGCTTCGTGGTCGACCGCTCGGAGCGACTCTTCATTTGAGTAGAAGAGCATTGTGAGTTCATTACCCTGATTACAGGTTTTTTCAAGAGTGTAATATAAGTGAACGGCAAGTACAGCCTAGGGAATTTCTTATAGGTCCATAGAAACAAAAACCTGTTGGCTACATATTATGTTCCCCAACTTAAGCACGCAGAACTTATAAATATGTTTAGGAATATGCACATCTATGGTTGATATTGATGTTCACATTCCAAAATTGATAAAAATGTTGATATGAAAATGAATGGTATTGCTGGCAAATAGTACAATAAGCTTTGGGGGTGACATGGTTGGTTCATTTGGTTTGTTATCTCCTTTAATTTAGACCTTAAACTTTATCCAACATGGATATCTAGGCCCCGAAAGGGAGTGGATTGTGATGTCCTACATTGGTTGGGGAGGAGAATAAAACACGATGTGGAAACCATAGCAGACATGTTTTAAAGCCTTGAGGGGAAGCCGAGTTAAAAGCATATGTGTTTTAAAGCCTTAGGGAAAATTGTAAAAGAAAACAATATTTGTTTAAATAATAATAATAATAAAAAAGATAATATAATCTATATTTTCAATAAGCAAATTTCTTTTTTAAGCTTGTGATTCAGTATTATATTTATATATTGTATTTCTTCAAAAAAAAAAATTAAATTAAATTAAATTATTGTTGTAATGAAATTAAATTATTTAGTAAGTGTAAAAATAAAGTTATTAAATTATTTTGTTTTTGGATGTGAAACAAGGCGCATAAAATTAGGATAGCGGTGTTTGAAACCGCCATTTTCGGTGCGATTCTCATTGCCAGATGCTGATCTCTTTGCGATTCTCAATTTCACCCATTACTTCGCTTCGTCTCTTCTGTTCTTCCGGACCCAAGAAATCCAAGAAAGAAAGAAGGAAACTTCTTCAGGAAAAACTGATTCGCATAAGCAAAGCCAAAGAGGCCACTCGTCTCCCTTTCCCTAAATCCTCATCAACCCCACTCTTAATCCACCACAAACCCTTCTCCCAATCCAAGATTCAAGCCCTTGATGCTGTTCTCAATGACCTTGAAGCTTCCCTCCACAATGGCGTCCCAATCGATGCTGAAATTTTCTCTTCCCTTTTGGAAACTTGTTACCAATTGCGAGCCCTTGATCATGGTATTCGGATTCATCGCCTAATACCCACCAATTTTTTACGAAGAAATGTGGGTGTTTCTTCTAAGCTTCTTCGTCTGTATGCTTCTTTTGGGTACATGGAGGATGCACACCAGGTGTTCGATGAAATGTGTCAACGAAATCTCTCTGCATTTTCTTGGAATTCTCTTATTTCTGGCTATGCTGAACTTGGTCTTTATGAAGATGCTCTGGCTCTCTACTTCCAAATGGAGGAAGAGGGTGTTGAGCCTGACCATTTCACTTTTCCTCGTGTACTCAAGGCCTGTGGTGGCATTGGGTCGATTCGAGTCGGGGAGGCAGTGCACCGGCATGTTGTTCGTTCGGGATTTGCTGGCGACATCTTCGTCCTCAATGCTCTAGTTGACATGTATGCCAAATGTGGTGACATTATGAGGGCTAGGAAAGTTTTTGATCAGATTGTTTCCAAGGATACAGTTTCCTGGAACTCAATGCTCACTGGCTACACACGCCATGGGCTGCTATTGGAGGCATTGAACACCTTTGATCAAATGATTCAAGAAGGTTACGAGCCAGATTCGGTTGCTTTATCCACCATGATCTCTAACATCTCGTCGTCGAAATTCAAGTTACACATCCACGGATGGGCAATTCGACACGGAATCGAATGGAATTTGTCGATTGCCAACTCTTTGATTGCCATGTATGCCAACTCTGGTAAGATCAACAGAGCAAGATGGCTGTTCGAGCAGATGCCTGAACGAGATATAGTGTCATGGAACACCATAATCTCTGCTCATTCCAACACCTCAAAAGCATTGACATATTTTGAGGTGATGGAGAGCCTTGGTGTTTTGCCAGACAGTGTAACATTTGTGTCATTACTGTCAACTTGTGCTCATCTGAGCTTAGTGAAGGAAGGGGGAAAGTTATATTCTGTGATGAAAGGAAAATATGGAATAAGACCAACCATAGAACATTATGCTTGTATGGTGAATCTTTATGGGAGGGCAGGGCTGATTGAAGAAGCTTATAGAATCATAACGAACGGGATGGAGGTCGAGGCAGGCCCGACCGTATGGGGTGCGCTGTTGTATGCGTGCTATCTCCATGGCAATGTCGATATCGCCGAGGTTGCTGCTGAAAAGCTTTTTGAATCGGAGCCCGATAACGAGCTCAATTTCAAGCTTCTGATGAAGATTTATGGCAATGCTGGGAGAATTGAAGACGAGAAGAGGGTGAGATTAATGATGGCGGAACGAGGATTAGATTTGTAA

mRNA sequence

ATGTTTTCAGGTGGTCCTGGAAGTGGTAAAGGTACACAATGTATGAAGATAGTTGAGAACTTTGGATTTACACATTTGAGTGCTGGAGATATATTAAGGAGGGAAATAGCTTCGAATAGTGCTGATGGTACCATGATTCTTGACACAATTAAGGAAGGAAAAATAGTTCCTTCAGAATTGACAGTGAAACTTATTCAAAAGGAAATGGAATCAAGTGACAATTATAAATTTCTCATTGATGGGTTCCCACGCAGTGAGGATAACAGGATTGCATTTGAACAAATTATCGGAGCAGAACCAGATATTGTACTCTTCTTTGACTGTCCAGAAGACGAAATGATGAAGCGTGTGCTCAATCGTAATCAGGGAAGAGTTGATGACAACGTTGACACAATCAAGAAAAGGCTAAAAGTTTTTTCGGCATTGAATCTCCCTGTAGTCAAATATTATCTGGAGAGGGGAAAGCTTTACAAGATAAATGCAGTTGGAACGGTGGATGAAATATACAAACAAGTTTATCCACTTTTTGCACAATTTAATTTTGAGTCCATTGCTGATCATTGTTTAATCATTTTTGTTCAGCAGCAGATGCTGATCTCTTTGCGATTCTCAATTTCACCCATTACTTCGCTTCGTCTCTTCTGTTCTTCCGGACCCAAGAAATCCAAGAAAGAAAGAAGGAAACTTCTTCAGGAAAAACTGATTCGCATAAGCAAAGCCAAAGAGGCCACTCGTCTCCCTTTCCCTAAATCCTCATCAACCCCACTCTTAATCCACCACAAACCCTTCTCCCAATCCAAGATTCAAGCCCTTGATGCTGTTCTCAATGACCTTGAAGCTTCCCTCCACAATGGCGTCCCAATCGATGCTGAAATTTTCTCTTCCCTTTTGGAAACTTGTTACCAATTGCGAGCCCTTGATCATGGTATTCGGATTCATCGCCTAATACCCACCAATTTTTTACGAAGAAATGTGGGTGTTTCTTCTAAGCTTCTTCGTCTGTATGCTTCTTTTGGGTACATGGAGGATGCACACCAGGTGTTCGATGAAATGTGTCAACGAAATCTCTCTGCATTTTCTTGGAATTCTCTTATTTCTGGCTATGCTGAACTTGGTCTTTATGAAGATGCTCTGGCTCTCTACTTCCAAATGGAGGAAGAGGGTGTTGAGCCTGACCATTTCACTTTTCCTCGTGTACTCAAGGCCTGTGGTGGCATTGGGTCGATTCGAGTCGGGGAGGCAGTGCACCGGCATGTTGTTCGTTCGGGATTTGCTGGCGACATCTTCGTCCTCAATGCTCTAGTTGACATGTATGCCAAATGTGGTGACATTATGAGGGCTAGGAAAGTTTTTGATCAGATTGTTTCCAAGGATACAGTTTCCTGGAACTCAATGCTCACTGGCTACACACGCCATGGGCTGCTATTGGAGGCATTGAACACCTTTGATCAAATGATTCAAGAAGGTTACGAGCCAGATTCGGTTGCTTTATCCACCATGATCTCTAACATCTCGTCGTCGAAATTCAAGTTACACATCCACGGATGGGCAATTCGACACGGAATCGAATGGAATTTGTCGATTGCCAACTCTTTGATTGCCATGTATGCCAACTCTGGTAAGATCAACAGAGCAAGATGGCTGTTCGAGCAGATGCCTGAACGAGATATAGTGTCATGGAACACCATAATCTCTGCTCATTCCAACACCTCAAAAGCATTGACATATTTTGAGGTGATGGAGAGCCTTGGTGTTTTGCCAGACAGTGTAACATTTGTGTCATTACTGTCAACTTGTGCTCATCTGAGCTTAGTGAAGGAAGGGGGAAAGTTATATTCTGTGATGAAAGGAAAATATGGAATAAGACCAACCATAGAACATTATGCTTGTATGGTGAATCTTTATGGGAGGGCAGGGCTGATTGAAGAAGCTTATAGAATCATAACGAACGGGATGGAGGTCGAGGCAGGCCCGACCGTATGGGGTGCGCTGTTGTATGCGTGCTATCTCCATGGCAATGTCGATATCGCCGAGGTTGCTGCTGAAAAGCTTTTTGAATCGGAGCCCGATAACGAGCTCAATTTCAAGCTTCTGATGAAGATTTATGGCAATGCTGGGAGAATTGAAGACGAGAAGAGGGTGAGATTAATGATGGCGGAACGAGGATTAGATTTGTAA

Coding sequence (CDS)

ATGTTTTCAGGTGGTCCTGGAAGTGGTAAAGGTACACAATGTATGAAGATAGTTGAGAACTTTGGATTTACACATTTGAGTGCTGGAGATATATTAAGGAGGGAAATAGCTTCGAATAGTGCTGATGGTACCATGATTCTTGACACAATTAAGGAAGGAAAAATAGTTCCTTCAGAATTGACAGTGAAACTTATTCAAAAGGAAATGGAATCAAGTGACAATTATAAATTTCTCATTGATGGGTTCCCACGCAGTGAGGATAACAGGATTGCATTTGAACAAATTATCGGAGCAGAACCAGATATTGTACTCTTCTTTGACTGTCCAGAAGACGAAATGATGAAGCGTGTGCTCAATCGTAATCAGGGAAGAGTTGATGACAACGTTGACACAATCAAGAAAAGGCTAAAAGTTTTTTCGGCATTGAATCTCCCTGTAGTCAAATATTATCTGGAGAGGGGAAAGCTTTACAAGATAAATGCAGTTGGAACGGTGGATGAAATATACAAACAAGTTTATCCACTTTTTGCACAATTTAATTTTGAGTCCATTGCTGATCATTGTTTAATCATTTTTGTTCAGCAGCAGATGCTGATCTCTTTGCGATTCTCAATTTCACCCATTACTTCGCTTCGTCTCTTCTGTTCTTCCGGACCCAAGAAATCCAAGAAAGAAAGAAGGAAACTTCTTCAGGAAAAACTGATTCGCATAAGCAAAGCCAAAGAGGCCACTCGTCTCCCTTTCCCTAAATCCTCATCAACCCCACTCTTAATCCACCACAAACCCTTCTCCCAATCCAAGATTCAAGCCCTTGATGCTGTTCTCAATGACCTTGAAGCTTCCCTCCACAATGGCGTCCCAATCGATGCTGAAATTTTCTCTTCCCTTTTGGAAACTTGTTACCAATTGCGAGCCCTTGATCATGGTATTCGGATTCATCGCCTAATACCCACCAATTTTTTACGAAGAAATGTGGGTGTTTCTTCTAAGCTTCTTCGTCTGTATGCTTCTTTTGGGTACATGGAGGATGCACACCAGGTGTTCGATGAAATGTGTCAACGAAATCTCTCTGCATTTTCTTGGAATTCTCTTATTTCTGGCTATGCTGAACTTGGTCTTTATGAAGATGCTCTGGCTCTCTACTTCCAAATGGAGGAAGAGGGTGTTGAGCCTGACCATTTCACTTTTCCTCGTGTACTCAAGGCCTGTGGTGGCATTGGGTCGATTCGAGTCGGGGAGGCAGTGCACCGGCATGTTGTTCGTTCGGGATTTGCTGGCGACATCTTCGTCCTCAATGCTCTAGTTGACATGTATGCCAAATGTGGTGACATTATGAGGGCTAGGAAAGTTTTTGATCAGATTGTTTCCAAGGATACAGTTTCCTGGAACTCAATGCTCACTGGCTACACACGCCATGGGCTGCTATTGGAGGCATTGAACACCTTTGATCAAATGATTCAAGAAGGTTACGAGCCAGATTCGGTTGCTTTATCCACCATGATCTCTAACATCTCGTCGTCGAAATTCAAGTTACACATCCACGGATGGGCAATTCGACACGGAATCGAATGGAATTTGTCGATTGCCAACTCTTTGATTGCCATGTATGCCAACTCTGGTAAGATCAACAGAGCAAGATGGCTGTTCGAGCAGATGCCTGAACGAGATATAGTGTCATGGAACACCATAATCTCTGCTCATTCCAACACCTCAAAAGCATTGACATATTTTGAGGTGATGGAGAGCCTTGGTGTTTTGCCAGACAGTGTAACATTTGTGTCATTACTGTCAACTTGTGCTCATCTGAGCTTAGTGAAGGAAGGGGGAAAGTTATATTCTGTGATGAAAGGAAAATATGGAATAAGACCAACCATAGAACATTATGCTTGTATGGTGAATCTTTATGGGAGGGCAGGGCTGATTGAAGAAGCTTATAGAATCATAACGAACGGGATGGAGGTCGAGGCAGGCCCGACCGTATGGGGTGCGCTGTTGTATGCGTGCTATCTCCATGGCAATGTCGATATCGCCGAGGTTGCTGCTGAAAAGCTTTTTGAATCGGAGCCCGATAACGAGCTCAATTTCAAGCTTCTGATGAAGATTTATGGCAATGCTGGGAGAATTGAAGACGAGAAGAGGGTGAGATTAATGATGGCGGAACGAGGATTAGATTTGTAA

Protein sequence

MFSGGPGSGKGTQCMKIVENFGFTHLSAGDILRREIASNSADGTMILDTIKEGKIVPSELTVKLIQKEMESSDNYKFLIDGFPRSEDNRIAFEQIIGAEPDIVLFFDCPEDEMMKRVLNRNQGRVDDNVDTIKKRLKVFSALNLPVVKYYLERGKLYKINAVGTVDEIYKQVYPLFAQFNFESIADHCLIIFVQQQMLISLRFSISPITSLRLFCSSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPLLIHHKPFSQSKIQALDAVLNDLEASLHNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHVVRSGFAGDIFVLNALVDMYAKCGDIMRARKVFDQIVSKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVALSTMISNISSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPERDIVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNLYGRAGLIEEAYRIITNGMEVEAGPTVWGALLYACYLHGNVDIAEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGLDL

Homology

[Close]

BLAST of Carg08007 vs. NCBI nr
Match: KAG7030831.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1443.3 bits (3735), Expect = 0.0e+00
Identity = 725/725 (100.00%), Postives = 725/725 (100.00%), Query Frame = 0


Query: 1   MFSGGPGSGKGTQCMKIVENFGFTHLSAGDILRREIASNSADGTMILDTIKEGKIVPSEL 60
           MFSGGPGSGKGTQCMKIVENFGFTHLSAGDILRREIASNSADGTMILDTIKEGKIVPSEL
Sbjct: 1   MFSGGPGSGKGTQCMKIVENFGFTHLSAGDILRREIASNSADGTMILDTIKEGKIVPSEL 60

Query: 61  TVKLIQKEMESSDNYKFLIDGFPRSEDNRIAFEQIIGAEPDIVLFFDCPEDEMMKRVLNR 120
           TVKLIQKEMESSDNYKFLIDGFPRSEDNRIAFEQIIGAEPDIVLFFDCPEDEMMKRVLNR
Sbjct: 61  TVKLIQKEMESSDNYKFLIDGFPRSEDNRIAFEQIIGAEPDIVLFFDCPEDEMMKRVLNR 120

Query: 121 NQGRVDDNVDTIKKRLKVFSALNLPVVKYYLERGKLYKINAVGTVDEIYKQVYPLFAQFN 180
           NQGRVDDNVDTIKKRLKVFSALNLPVVKYYLERGKLYKINAVGTVDEIYKQVYPLFAQFN
Sbjct: 121 NQGRVDDNVDTIKKRLKVFSALNLPVVKYYLERGKLYKINAVGTVDEIYKQVYPLFAQFN 180

Query: 181 FESIADHCLIIFVQQQMLISLRFSISPITSLRLFCSSGPKKSKKERRKLLQEKLIRISKA 240
           FESIADHCLIIFVQQQMLISLRFSISPITSLRLFCSSGPKKSKKERRKLLQEKLIRISKA
Sbjct: 181 FESIADHCLIIFVQQQMLISLRFSISPITSLRLFCSSGPKKSKKERRKLLQEKLIRISKA 240

Query: 241 KEATRLPFPKSSSTPLLIHHKPFSQSKIQALDAVLNDLEASLHNGVPIDAEIFSSLLETC 300
           KEATRLPFPKSSSTPLLIHHKPFSQSKIQALDAVLNDLEASLHNGVPIDAEIFSSLLETC
Sbjct: 241 KEATRLPFPKSSSTPLLIHHKPFSQSKIQALDAVLNDLEASLHNGVPIDAEIFSSLLETC 300

Query: 301 YQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFS 360
           YQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFS
Sbjct: 301 YQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFS 360

Query: 361 WNSLISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHVV 420
           WNSLISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHVV
Sbjct: 361 WNSLISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHVV 420

Query: 421 RSGFAGDIFVLNALVDMYAKCGDIMRARKVFDQIVSKDTVSWNSMLTGYTRHGLLLEALN 480
           RSGFAGDIFVLNALVDMYAKCGDIMRARKVFDQIVSKDTVSWNSMLTGYTRHGLLLEALN
Sbjct: 421 RSGFAGDIFVLNALVDMYAKCGDIMRARKVFDQIVSKDTVSWNSMLTGYTRHGLLLEALN 480

Query: 481 TFDQMIQEGYEPDSVALSTMISNISSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSG 540
           TFDQMIQEGYEPDSVALSTMISNISSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSG
Sbjct: 481 TFDQMIQEGYEPDSVALSTMISNISSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSG 540

Query: 541 KINRARWLFEQMPERDIVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCA 600
           KINRARWLFEQMPERDIVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCA
Sbjct: 541 KINRARWLFEQMPERDIVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCA 600

Query: 601 HLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNLYGRAGLIEEAYRIITNGMEVEAGPTV 660
           HLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNLYGRAGLIEEAYRIITNGMEVEAGPTV
Sbjct: 601 HLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNLYGRAGLIEEAYRIITNGMEVEAGPTV 660

Query: 661 WGALLYACYLHGNVDIAEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAE 720
           WGALLYACYLHGNVDIAEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAE
Sbjct: 661 WGALLYACYLHGNVDIAEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAE 720

Query: 721 RGLDL 726
           RGLDL
Sbjct: 721 RGLDL 725

[Close]

BLAST of Carg08007 vs. NCBI nr
Match: KAG6600165.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1055.8 bits (2729), Expect = 1.7e-304
Identity = 529/529 (100.00%), Postives = 529/529 (100.00%), Query Frame = 0


Query: 197 MLISLRFSISPITSLRLFCSSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPL 256
           MLISLRFSISPITSLRLFCSSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPL
Sbjct: 1   MLISLRFSISPITSLRLFCSSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPL 60

Query: 257 LIHHKPFSQSKIQALDAVLNDLEASLHNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLI 316
           LIHHKPFSQSKIQALDAVLNDLEASLHNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLI
Sbjct: 61  LIHHKPFSQSKIQALDAVLNDLEASLHNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLI 120

Query: 317 PTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYED 376
           PTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYED
Sbjct: 121 PTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYED 180

Query: 377 ALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHVVRSGFAGDIFVLNALVD 436
           ALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHVVRSGFAGDIFVLNALVD
Sbjct: 181 ALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHVVRSGFAGDIFVLNALVD 240

Query: 437 MYAKCGDIMRARKVFDQIVSKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVA 496
           MYAKCGDIMRARKVFDQIVSKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVA
Sbjct: 241 MYAKCGDIMRARKVFDQIVSKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVA 300

Query: 497 LSTMISNISSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPERD 556
           LSTMISNISSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPERD
Sbjct: 301 LSTMISNISSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPERD 360

Query: 557 IVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMK 616
           IVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMK
Sbjct: 361 IVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMK 420

Query: 617 GKYGIRPTIEHYACMVNLYGRAGLIEEAYRIITNGMEVEAGPTVWGALLYACYLHGNVDI 676
           GKYGIRPTIEHYACMVNLYGRAGLIEEAYRIITNGMEVEAGPTVWGALLYACYLHGNVDI
Sbjct: 421 GKYGIRPTIEHYACMVNLYGRAGLIEEAYRIITNGMEVEAGPTVWGALLYACYLHGNVDI 480

Query: 677 AEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGLDL 726
           AEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGLDL
Sbjct: 481 AEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGLDL 529

[Close]

BLAST of Carg08007 vs. NCBI nr
Match: XP_022942651.1 (pentatricopeptide repeat-containing protein At4g25270, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1049.7 bits (2713), Expect = 1.2e-302
Identity = 525/529 (99.24%), Postives = 527/529 (99.62%), Query Frame = 0


Query: 197 MLISLRFSISPITSLRLFCSSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPL 256
           MLISLRFSISPITSLRL CSSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPL
Sbjct: 1   MLISLRFSISPITSLRLLCSSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPL 60

Query: 257 LIHHKPFSQSKIQALDAVLNDLEASLHNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLI 316
           LIHHKPFSQSKIQALDAVLNDLEASLHNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLI
Sbjct: 61  LIHHKPFSQSKIQALDAVLNDLEASLHNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLI 120

Query: 317 PTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYED 376
           PTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYED
Sbjct: 121 PTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYED 180

Query: 377 ALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHVVRSGFAGDIFVLNALVD 436
           ALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRH+VRSGFAGDIFVLNALVD
Sbjct: 181 ALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHIVRSGFAGDIFVLNALVD 240

Query: 437 MYAKCGDIMRARKVFDQIVSKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVA 496
           MYAKCGDIMRARKVFDQIVSKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVA
Sbjct: 241 MYAKCGDIMRARKVFDQIVSKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVA 300

Query: 497 LSTMISNISSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPERD 556
           LSTMISNISSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPERD
Sbjct: 301 LSTMISNISSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPERD 360

Query: 557 IVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMK 616
           IVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLY+ MK
Sbjct: 361 IVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYTEMK 420

Query: 617 GKYGIRPTIEHYACMVNLYGRAGLIEEAYRIITNGMEVEAGPTVWGALLYACYLHGNVDI 676
           GKYGIRPTIEHYACMVNLYGRAGLIEEAYRIITNGMEVEAGPTVWGALLYACYLHGNVDI
Sbjct: 421 GKYGIRPTIEHYACMVNLYGRAGLIEEAYRIITNGMEVEAGPTVWGALLYACYLHGNVDI 480

Query: 677 AEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGLDL 726
           AEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGLDL
Sbjct: 481 AEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGLDL 529

[Close]

BLAST of Carg08007 vs. NCBI nr
Match: XP_023549868.1 (pentatricopeptide repeat-containing protein At4g25270, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1044.6 bits (2700), Expect = 3.8e-301
Identity = 522/529 (98.68%), Postives = 524/529 (99.05%), Query Frame = 0


Query: 197 MLISLRFSISPITSLRLFCSSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPL 256
           MLISLRFSISPITSLR FCSSGPKKSKKER+KLLQEKLIRISKAKEATRLPFPKSSSTPL
Sbjct: 1   MLISLRFSISPITSLRPFCSSGPKKSKKERKKLLQEKLIRISKAKEATRLPFPKSSSTPL 60

Query: 257 LIHHKPFSQSKIQALDAVLNDLEASLHNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLI 316
           LIHHKPFSQSKIQALDAVLNDLEASLHNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLI
Sbjct: 61  LIHHKPFSQSKIQALDAVLNDLEASLHNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLI 120

Query: 317 PTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYED 376
           PTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYED
Sbjct: 121 PTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYED 180

Query: 377 ALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHVVRSGFAGDIFVLNALVD 436
           ALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGE VHRH+VRSGFAGDIFVLNALVD
Sbjct: 181 ALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEGVHRHIVRSGFAGDIFVLNALVD 240

Query: 437 MYAKCGDIMRARKVFDQIVSKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVA 496
           MYAKCGDIMRARKVFDQIV KDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVA
Sbjct: 241 MYAKCGDIMRARKVFDQIVHKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVA 300

Query: 497 LSTMISNISSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPERD 556
           LSTMISNISSSKFKLHIHGWAIRHGIEWNLSI NSLIAMYANSGKINRARWLFEQMPERD
Sbjct: 301 LSTMISNISSSKFKLHIHGWAIRHGIEWNLSIVNSLIAMYANSGKINRARWLFEQMPERD 360

Query: 557 IVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMK 616
           IVSWNTIISAHSNTSKALTYFEVMESLG LPDSVTFVSLLSTCAHLSLVKEGGKLYSVMK
Sbjct: 361 IVSWNTIISAHSNTSKALTYFEVMESLGFLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMK 420

Query: 617 GKYGIRPTIEHYACMVNLYGRAGLIEEAYRIITNGMEVEAGPTVWGALLYACYLHGNVDI 676
           GKYGIRPTIEHYACMVNLYGRAGLIEEAYRIITNGMEVEAGPTVWGALLYACYLHGNVDI
Sbjct: 421 GKYGIRPTIEHYACMVNLYGRAGLIEEAYRIITNGMEVEAGPTVWGALLYACYLHGNVDI 480

Query: 677 AEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGLDL 726
           AEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGLDL
Sbjct: 481 AEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGLDL 529

[Close]

BLAST of Carg08007 vs. NCBI nr
Match: XP_022993795.1 (pentatricopeptide repeat-containing protein At4g25270, chloroplastic [Cucurbita maxima])

HSP 1 Score: 1043.5 bits (2697), Expect = 8.5e-301
Identity = 521/529 (98.49%), Postives = 526/529 (99.43%), Query Frame = 0


Query: 197 MLISLRFSISPITSLRLFCSSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPL 256
           MLISLRFSISPITSLRLFCSSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPL
Sbjct: 1   MLISLRFSISPITSLRLFCSSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPL 60

Query: 257 LIHHKPFSQSKIQALDAVLNDLEASLHNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLI 316
           LIHHKPFS+SKIQALDAVLNDLEASL NGVPIDAEIFSSLLETCYQLRALDHGIRIHRLI
Sbjct: 61  LIHHKPFSRSKIQALDAVLNDLEASLDNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLI 120

Query: 317 PTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYED 376
           PTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYED
Sbjct: 121 PTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYED 180

Query: 377 ALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHVVRSGFAGDIFVLNALVD 436
           ALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRH+VRSGFAGDIFVLNALVD
Sbjct: 181 ALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHIVRSGFAGDIFVLNALVD 240

Query: 437 MYAKCGDIMRARKVFDQIVSKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVA 496
           MYAKCGDIMRARKVFDQI+ KDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVA
Sbjct: 241 MYAKCGDIMRARKVFDQIIHKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVA 300

Query: 497 LSTMISNISSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPERD 556
           LSTMISNI+SSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMP+RD
Sbjct: 301 LSTMISNITSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPQRD 360

Query: 557 IVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMK 616
           IVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMK
Sbjct: 361 IVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMK 420

Query: 617 GKYGIRPTIEHYACMVNLYGRAGLIEEAYRIITNGMEVEAGPTVWGALLYACYLHGNVDI 676
           GKYGIRPTIEHYACMVNLYGRAGLIEEAYRII NGMEVEAGPTVWGALLYACYLHGNVDI
Sbjct: 421 GKYGIRPTIEHYACMVNLYGRAGLIEEAYRIIMNGMEVEAGPTVWGALLYACYLHGNVDI 480

Query: 677 AEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGLDL 726
           AEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGLDL
Sbjct: 481 AEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGLDL 529

[Close]

BLAST of Carg08007 vs. ExPASy Swiss-Prot
Match: Q9SB36 (Pentatricopeptide repeat-containing protein At4g25270, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E53 PE=3 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 9.5e-178
Identity = 302/510 (59.22%), Postives = 386/510 (75.69%), Query Frame = 0


Query: 216 SSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPLLIHHKPFSQSKIQALDAVL 275
           SS  KK  +  ++L Q +  + +     T L F K S TPLLI  +   +++++ALD+V+
Sbjct: 18  SSSMKKKPRHHQQLKQHRQNQYNN-NGFTSLSFTKPSPTPLLIEKQSIHRTQLEALDSVI 77

Query: 276 NDLEASLHNGVPI-DAEIFSSLLETCYQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRL 335
            DLE S   G+ + + EIF+SLLETCY LRA+DHG+R+H LIP   LR N+G+SSKL+RL
Sbjct: 78  TDLETSAQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRL 137

Query: 336 YASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYEDALALYFQMEEEGVEPDHF 395
           YAS GY E AH+VFD M +R+ S F+WNSLISGYAELG YEDA+ALYFQM E+GV+PD F
Sbjct: 138 YASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRF 197

Query: 396 TFPRVLKACGGIGSIRVGEAVHRHVVRSGFAGDIFVLNALVDMYAKCGDIMRARKVFDQI 455
           TFPRVLKACGGIGS+++GEA+HR +V+ GF  D++VLNALV MYAKCGDI++AR VFD I
Sbjct: 198 TFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMI 257

Query: 456 VSKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVALSTMISNISSSKFKLHIH 515
             KD VSWNSMLTGY  HGLL EAL+ F  M+Q G EPD VA+S++++ + S K    +H
Sbjct: 258 PHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLH 317

Query: 516 GWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPERDIVSWNTIISAHSNTSKAL 575
           GW IR G+EW LS+AN+LI +Y+  G++ +A ++F+QM ERD VSWN IISAHS  S  L
Sbjct: 318 GWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNGL 377

Query: 576 TYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNL 635
            YFE M      PD +TFVS+LS CA+  +V++G +L+S+M  +YGI P +EHYACMVNL
Sbjct: 378 KYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNL 437

Query: 636 YGRAGLIEEAYRIITNGMEVEAGPTVWGALLYACYLHGNVDIAEVAAEKLFESEPDNELN 695
           YGRAG++EEAY +I   M +EAGPTVWGALLYACYLHGN DI EVAA++LFE EPDNE N
Sbjct: 438 YGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHN 497

Query: 696 FKLLMKIYGNAGRIEDEKRVRLMMAERGLD 725
           F+LL++IY  A R ED +RVR MM +RGL+
Sbjct: 498 FELLIRIYSKAKRAEDVERVRQMMVDRGLE 526

[Close]

BLAST of Carg08007 vs. ExPASy Swiss-Prot
Match: Q9STF3 (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 4.0e-83
Identity = 165/446 (37.00%), Postives = 270/446 (60.54%), Query Frame = 0


Query: 291 EIFSSLLETCYQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDE 350
           + +  L+  C    +L   +R+HR I  N   ++  +++KL+ +Y+  G ++ A +VFD+
Sbjct: 78  QTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDK 137

Query: 351 MCQRNLSAFSWNSLISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLKACGG----I 410
             +R +  + WN+L       G  E+ L LY++M   GVE D FT+  VLKAC      +
Sbjct: 138 TRKRTI--YVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTV 197

Query: 411 GSIRVGEAVHRHVVRSGFAGDIFVLNALVDMYAKCGDIMRARKVFDQIVSKDTVSWNSML 470
             +  G+ +H H+ R G++  ++++  LVDMYA+ G +  A  VF  +  ++ VSW++M+
Sbjct: 198 NHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMI 257

Query: 471 TGYTRHGLLLEALNTFDQMIQEGYE--PDSVALSTMISNISS----SKFKLHIHGWAIRH 530
             Y ++G   EAL TF +M++E  +  P+SV + +++   +S     + KL IHG+ +R 
Sbjct: 258 ACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKL-IHGYILRR 317

Query: 531 GIEWNLSIANSLIAMYANSGKINRARWLFEQMPERDIVSWNTIISA---HSNTSKALTYF 590
           G++  L + ++L+ MY   GK+   + +F++M +RD+VSWN++IS+   H    KA+  F
Sbjct: 318 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIF 377

Query: 591 EVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNLYGR 650
           E M + G  P  VTFVS+L  C+H  LV+EG +L+  M   +GI+P IEHYACMV+L GR
Sbjct: 378 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGR 437

Query: 651 AGLIEEAYRIITNGMEVEAGPTVWGALLYACYLHGNVDIAEVAAEKLFESEPDNELNFKL 710
           A  ++EA +++ + M  E GP VWG+LL +C +HGNV++AE A+ +LF  EP N  N+ L
Sbjct: 438 ANRLDEAAKMVQD-MRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVL 497

Query: 711 LMKIYGNAGRIEDEKRVRLMMAERGL 724
           L  IY  A   ++ KRV+ ++  RGL
Sbjct: 498 LADIYAEAQMWDEVKRVKKLLEHRGL 519

[Close]

BLAST of Carg08007 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 3.1e-80
Identity = 163/449 (36.30%), Postives = 256/449 (57.02%), Query Frame = 0


Query: 282 LHNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYM 341
           L +G+ ID     S+   C   R +  G  +H +       R     + LL +Y+  G +
Sbjct: 288 LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 347

Query: 342 EDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLK 401
           + A  VF EM  R  S  S+ S+I+GYA  GL  +A+ L+ +MEEEG+ PD +T   VL 
Sbjct: 348 DSAKAVFREMSDR--SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 407

Query: 402 ACGGIGSIRVGEAVHRHVVRSGFAGDIFVLNALVDMYAKCGDIMRARKVFDQIVSKDTVS 461
            C     +  G+ VH  +  +    DIFV NAL+DMYAKCG +  A  VF ++  KD +S
Sbjct: 408 CCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS 467

Query: 462 WNSMLTGYTRHGLLLEALNTFDQMIQE-GYEPDSVALSTMI---SNISSSKFKLHIHGWA 521
           WN+++ GY+++    EAL+ F+ +++E  + PD   ++ ++   +++S+      IHG+ 
Sbjct: 468 WNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYI 527

Query: 522 IRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPERDIVSWNTIISA---HSNTSKAL 581
           +R+G   +  +ANSL+ MYA  G +  A  LF+ +  +D+VSW  +I+    H    +A+
Sbjct: 528 MRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAI 587

Query: 582 TYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNL 641
             F  M   G+  D ++FVSLL  C+H  LV EG + +++M+ +  I PT+EHYAC+V++
Sbjct: 588 ALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDM 647

Query: 642 YGRAGLIEEAYRIITNGMEVEAGPTVWGALLYACYLHGNVDIAEVAAEKLFESEPDNELN 701
             R G + +AYR I N M +    T+WGALL  C +H +V +AE  AEK+FE EP+N   
Sbjct: 648 LARTGDLIKAYRFIEN-MPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGY 707

Query: 702 FKLLMKIYGNAGRIEDEKRVRLMMAERGL 724
           + L+  IY  A + E  KR+R  + +RGL
Sbjct: 708 YVLMANIYAEAEKWEQVKRLRKRIGQRGL 733

[Close]

BLAST of Carg08007 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 7.2e-77
Identity = 154/447 (34.45%), Postives = 255/447 (57.05%), Query Frame = 0


Query: 285 GVPIDAEIFSSLLETCYQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYMEDA 344
           G  +D  + +SL+    Q   L+   ++    P     R+V   + L++ YAS GY+E+A
Sbjct: 164 GCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP----HRDVVSYTALIKGYASRGYIENA 223

Query: 345 HQVFDEMCQRNLSAFSWNSLISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLKACG 404
            ++FDE+  +++   SWN++ISGYAE G Y++AL L+  M +  V PD  T   V+ AC 
Sbjct: 224 QKLFDEIPVKDV--VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 283

Query: 405 GIGSIRVGEAVHRHVVRSGFAGDIFVLNALVDMYAKCGDIMRARKVFDQIVSKDTVSWNS 464
             GSI +G  VH  +   GF  ++ ++NAL+D+Y+KCG++  A  +F+++  KD +SWN+
Sbjct: 284 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 343

Query: 465 MLTGYTRHGLLLEALNTFDQMIQEGYEPDSVALSTMI---SNISSSKFKLHIHGWAIRH- 524
           ++ GYT   L  EAL  F +M++ G  P+ V + +++   +++ +      IH +  +  
Sbjct: 344 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 403

Query: 525 -GIEWNLSIANSLIAMYANSGKINRARWLFEQMPERDIVSWNTII---SAHSNTSKALTY 584
            G+    S+  SLI MYA  G I  A  +F  +  + + SWN +I   + H     +   
Sbjct: 404 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 463

Query: 585 FEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNLYG 644
           F  M  +G+ PD +TFV LLS C+H  ++  G  ++  M   Y + P +EHY CM++L G
Sbjct: 464 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 523

Query: 645 RAGLIEEAYRIITNGMEVEAGPTVWGALLYACYLHGNVDIAEVAAEKLFESEPDNELNFK 704
            +GL +EA  +I N ME+E    +W +LL AC +HGNV++ E  AE L + EP+N  ++ 
Sbjct: 524 HSGLFKEAEEMI-NMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYV 583

Query: 705 LLMKIYGNAGRIEDEKRVRLMMAERGL 724
           LL  IY +AGR  +  + R ++ ++G+
Sbjct: 584 LLSNIYASAGRWNEVAKTRALLNDKGM 603

[Close]

BLAST of Carg08007 vs. ExPASy Swiss-Prot
Match: O24464 (UMP-CMP kinase OS=Prunus armeniaca OX=36596 PE=2 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 9.4e-77
Identity = 139/174 (79.89%), Postives = 160/174 (91.95%), Query Frame = 0


Query: 4   GGPGSGKGTQCMKIVENFGFTHLSAGDILRREIASNSADGTMILDTIKEGKIVPSELTVK 63
           GGPGSGKGTQC KIVE FGFTH+SAGD+LRREIAS SA G++IL TI+EGKIVPS++TV+
Sbjct: 54  GGPGSGKGTQCAKIVEAFGFTHVSAGDLLRREIASGSAYGSVILSTIREGKIVPSQVTVE 113

Query: 64  LIQKEMESSDNYKFLIDGFPRSEDNRIAFEQIIGAEPDIVLFFDCPEDEMMKRVLNRNQG 123
           LIQKEMESSDNYKFLIDGFPRSE+NR AFEQ IGAEPD+VLFFDCPE EM+KRVLNRNQG
Sbjct: 114 LIQKEMESSDNYKFLIDGFPRSEENRKAFEQTIGAEPDVVLFFDCPEQEMVKRVLNRNQG 173

Query: 124 RVDDNVDTIKKRLKVFSALNLPVVKYYLERGKLYKINAVGTVDEIYKQVYPLFA 178
           RVDDN+DTIKKRL++F  LN PV+ YY +RGKL+KINAVGTVDEI+++V P+FA
Sbjct: 174 RVDDNIDTIKKRLEIFDELNWPVINYYSQRGKLHKINAVGTVDEIFEKVRPIFA 227

[Close]

BLAST of Carg08007 vs. ExPASy TrEMBL
Match: A0A6J1FPF9 (pentatricopeptide repeat-containing protein At4g25270, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447624 PE=4 SV=1)

HSP 1 Score: 1049.7 bits (2713), Expect = 5.7e-303
Identity = 525/529 (99.24%), Postives = 527/529 (99.62%), Query Frame = 0


Query: 197 MLISLRFSISPITSLRLFCSSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPL 256
           MLISLRFSISPITSLRL CSSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPL
Sbjct: 1   MLISLRFSISPITSLRLLCSSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPL 60

Query: 257 LIHHKPFSQSKIQALDAVLNDLEASLHNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLI 316
           LIHHKPFSQSKIQALDAVLNDLEASLHNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLI
Sbjct: 61  LIHHKPFSQSKIQALDAVLNDLEASLHNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLI 120

Query: 317 PTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYED 376
           PTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYED
Sbjct: 121 PTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYED 180

Query: 377 ALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHVVRSGFAGDIFVLNALVD 436
           ALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRH+VRSGFAGDIFVLNALVD
Sbjct: 181 ALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHIVRSGFAGDIFVLNALVD 240

Query: 437 MYAKCGDIMRARKVFDQIVSKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVA 496
           MYAKCGDIMRARKVFDQIVSKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVA
Sbjct: 241 MYAKCGDIMRARKVFDQIVSKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVA 300

Query: 497 LSTMISNISSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPERD 556
           LSTMISNISSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPERD
Sbjct: 301 LSTMISNISSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPERD 360

Query: 557 IVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMK 616
           IVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLY+ MK
Sbjct: 361 IVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYTEMK 420

Query: 617 GKYGIRPTIEHYACMVNLYGRAGLIEEAYRIITNGMEVEAGPTVWGALLYACYLHGNVDI 676
           GKYGIRPTIEHYACMVNLYGRAGLIEEAYRIITNGMEVEAGPTVWGALLYACYLHGNVDI
Sbjct: 421 GKYGIRPTIEHYACMVNLYGRAGLIEEAYRIITNGMEVEAGPTVWGALLYACYLHGNVDI 480

Query: 677 AEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGLDL 726
           AEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGLDL
Sbjct: 481 AEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGLDL 529

[Close]

BLAST of Carg08007 vs. ExPASy TrEMBL
Match: A0A6J1JZI1 (pentatricopeptide repeat-containing protein At4g25270, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111489696 PE=4 SV=1)

HSP 1 Score: 1043.5 bits (2697), Expect = 4.1e-301
Identity = 521/529 (98.49%), Postives = 526/529 (99.43%), Query Frame = 0


Query: 197 MLISLRFSISPITSLRLFCSSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPL 256
           MLISLRFSISPITSLRLFCSSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPL
Sbjct: 1   MLISLRFSISPITSLRLFCSSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPL 60

Query: 257 LIHHKPFSQSKIQALDAVLNDLEASLHNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLI 316
           LIHHKPFS+SKIQALDAVLNDLEASL NGVPIDAEIFSSLLETCYQLRALDHGIRIHRLI
Sbjct: 61  LIHHKPFSRSKIQALDAVLNDLEASLDNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLI 120

Query: 317 PTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYED 376
           PTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYED
Sbjct: 121 PTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYED 180

Query: 377 ALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHVVRSGFAGDIFVLNALVD 436
           ALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRH+VRSGFAGDIFVLNALVD
Sbjct: 181 ALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHIVRSGFAGDIFVLNALVD 240

Query: 437 MYAKCGDIMRARKVFDQIVSKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVA 496
           MYAKCGDIMRARKVFDQI+ KDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVA
Sbjct: 241 MYAKCGDIMRARKVFDQIIHKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVA 300

Query: 497 LSTMISNISSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPERD 556
           LSTMISNI+SSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMP+RD
Sbjct: 301 LSTMISNITSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPQRD 360

Query: 557 IVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMK 616
           IVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMK
Sbjct: 361 IVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMK 420

Query: 617 GKYGIRPTIEHYACMVNLYGRAGLIEEAYRIITNGMEVEAGPTVWGALLYACYLHGNVDI 676
           GKYGIRPTIEHYACMVNLYGRAGLIEEAYRII NGMEVEAGPTVWGALLYACYLHGNVDI
Sbjct: 421 GKYGIRPTIEHYACMVNLYGRAGLIEEAYRIIMNGMEVEAGPTVWGALLYACYLHGNVDI 480

Query: 677 AEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGLDL 726
           AEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGLDL
Sbjct: 481 AEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGLDL 529

[Close]

BLAST of Carg08007 vs. ExPASy TrEMBL
Match: A0A6J1AF96 (UMP-CMP kinase OS=Herrania umbratica OX=108875 GN=LOC110417541 PE=3 SV=1)

HSP 1 Score: 1011.5 bits (2614), Expect = 1.7e-291
Identity = 496/722 (68.70%), Postives = 597/722 (82.69%), Query Frame = 0


Query: 4   GGPGSGKGTQCMKIVENFGFTHLSAGDILRREIASNSADGTMILDTIKEGKIVPSELTVK 63
           GGPGSGKGTQC+KIVE FGFTHLSAGD+LRREIASNSADG MIL+TIKEGKIVPSE+TVK
Sbjct: 57  GGPGSGKGTQCIKIVETFGFTHLSAGDLLRREIASNSADGAMILNTIKEGKIVPSEVTVK 116

Query: 64  LIQKEMESSDNYKFLIDGFPRSEDNRIAFEQIIGAEPDIVLFFDCPEDEMMKRVLNRNQG 123
           LIQKEMES+DN+KFLIDGFPRSE+NRIAFE+IIGAEP+IVLFFDCPE+EM+KRVLNRNQG
Sbjct: 117 LIQKEMESNDNHKFLIDGFPRSEENRIAFERIIGAEPNIVLFFDCPEEEMVKRVLNRNQG 176

Query: 124 RVDDNVDTIKKRLKVFSALNLPVVKYYLERGKLYKINAVGTVDEIYKQVYPLF--AQFNF 183
           RVDDN+DT++KRLKVF ALNLPV+ YY +RGKLY INAVGTV+EI++QV P+F  ++  F
Sbjct: 177 RVDDNIDTVRKRLKVFEALNLPVINYYSQRGKLYTINAVGTVNEIFEQVLPVFTASELTF 236

Query: 184 ESIADHCLIIFVQQQMLISLRFSISPITSLRLFCSSGPKKSKKERRKLLQEKLIRISKAK 243
           +  +   L       M+  LR     + SL L CSS  KKS+K++    Q KL +I ++ 
Sbjct: 237 KISSPPFLPALPSTTMVALLRPPSLHLVSLTLRCSSTSKKSEKQK----QLKLKQIHQS- 296

Query: 244 EATRLPFPKSSSTPLLIHHKPFSQSKIQALDAVLNDLEASLHNGVPIDAEIFSSLLETCY 303
            +T LPF KSS TPLLI+HKPF+Q+K+QALDAV+ DLEA++ NG+ I +EIFSSLLETCY
Sbjct: 297 NSTALPFRKSSPTPLLINHKPFTQTKLQALDAVVKDLEATVKNGMNITSEIFSSLLETCY 356

Query: 304 QLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSW 363
           QL+++DHGI+IH L+P   LR+N G+SSKL+RLYAS G++E AHQVFDEM +RN SAF W
Sbjct: 357 QLKSIDHGIKIHNLVPKTLLRKNTGISSKLVRLYASCGHIESAHQVFDEMSKRNESAFPW 416

Query: 364 NSLISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHVVR 423
           NSLISGYAELG YEDALALYFQMEEEGVEPD +TFPR LKAC G+G I++GEAVHR +VR
Sbjct: 417 NSLISGYAELGQYEDALALYFQMEEEGVEPDRYTFPRALKACAGLGLIQIGEAVHRDLVR 476

Query: 424 SGFAGDIFVLNALVDMYAKCGDIMRARKVFDQIVSKDTVSWNSMLTGYTRHGLLLEALNT 483
            GF  D FVLNALVDMYAKCGD+++AR+VFD I  KDTVSWNSMLTGY RHGLL+EA   
Sbjct: 477 KGFGNDGFVLNALVDMYAKCGDVVKARRVFDNIACKDTVSWNSMLTGYIRHGLLVEASEV 536

Query: 484 FDQMIQEGYEPDSVALSTMISNISSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGK 543
           F  MI+EGYEPD VA+ST++S + S K  L IHGW +R GIEWNLS+ N+L+ +Y+N GK
Sbjct: 537 FRGMIREGYEPDPVAISTILSGVWSLKIVLQIHGWILRRGIEWNLSVVNALVVVYSNHGK 596

Query: 544 INRARWLFEQMPERDIVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAH 603
           ++RA WLF QMPERD+VSWN IIS HS   +AL +FE M S G LPDS+TFV++LS CAH
Sbjct: 597 LDRASWLFRQMPERDVVSWNAIISGHSKRPEALVFFEQMVSGGTLPDSITFVAILSACAH 656

Query: 604 LSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNLYGRAGLIEEAYRIITNGMEVEAGPTVW 663
           L  VK+G +L+S+M+ KY I P +EHYACMVNLYGRAGLI+EA+ +I   ME EAGPTVW
Sbjct: 657 LGFVKDGEQLFSLMRKKYAINPIMEHYACMVNLYGRAGLIDEAFNLIVERMEFEAGPTVW 716

Query: 664 GALLYACYLHGNVDIAEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAER 723
           GALLY+C +HG++DI E+AA+ LFE EPDNE NF+LLMKIYGNAGR+ED +RVR MM +R
Sbjct: 717 GALLYSCSVHGHIDIGEIAAQNLFELEPDNEHNFELLMKIYGNAGRLEDVERVRKMMLDR 773

[Close]

BLAST of Carg08007 vs. ExPASy TrEMBL
Match: A0A061FZF0 (UMP-CMP kinase OS=Theobroma cacao OX=3641 GN=TCM_014953 PE=3 SV=1)

HSP 1 Score: 994.6 bits (2570), Expect = 2.2e-286
Identity = 490/722 (67.87%), Postives = 589/722 (81.58%), Query Frame = 0


Query: 4   GGPGSGKGTQCMKIVENFGFTHLSAGDILRREIASNSADGTMILDTIKEGKIVPSELTVK 63
           GGPGSGKGTQC+KIVE FGFTHLSAGD+LR+EI SNSADG MIL+TIKEG+IVPSE+TVK
Sbjct: 57  GGPGSGKGTQCIKIVETFGFTHLSAGDLLRQEITSNSADGAMILNTIKEGRIVPSEVTVK 116

Query: 64  LIQKEMESSDNYKFLIDGFPRSEDNRIAFEQIIGAEPDIVLFFDCPEDEMMKRVLNRNQG 123
           LIQKEMES+DN+KFLIDGFPRSE+NRIAFE+IIGAEP+IVLFFDCPE+EM+KRVLNRNQG
Sbjct: 117 LIQKEMESNDNHKFLIDGFPRSEENRIAFERIIGAEPNIVLFFDCPEEEMVKRVLNRNQG 176

Query: 124 RVDDNVDTIKKRLKVFSALNLPVVKYYLERGKLYKINAVGTVDEIYKQVYPLF--AQFNF 183
           RVDDN+DT++KRLKVF ALNLPV+ YY +RGKLY INAVGTVDEI++QV P+F  ++  F
Sbjct: 177 RVDDNIDTVRKRLKVFEALNLPVINYYSQRGKLYTINAVGTVDEIFEQVLPVFTASELTF 236

Query: 184 ESIADHCLIIFVQQQMLISLRFSISPITSLRLFCSSGPKKSKKERRKLLQEKLIRISKAK 243
           +      L   +   M+  L+       S  L CSS  KKS  E++K L+ K I  SK  
Sbjct: 237 KISIPPFLSALLSLTMVALLQPPSFHFVSWTLSCSSKSKKS--EKQKQLKRKQIHQSK-- 296

Query: 244 EATRLPFPKSSSTPLLIHHKPFSQSKIQALDAVLNDLEASLHNGVPIDAEIFSSLLETCY 303
            +T LPF KSS TPLLI+HKPF+Q+K+QALDAV+ DLEAS+ NG+ I +EIFSSLLETCY
Sbjct: 297 -STALPFRKSSPTPLLINHKPFTQTKLQALDAVVKDLEASVKNGMNITSEIFSSLLETCY 356

Query: 304 QLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSW 363
           QL+++D GI+IH L+P   LR+N G+SSKLLRLYAS G++E AHQVFDEM +RN SAF W
Sbjct: 357 QLKSIDQGIKIHNLVPKTLLRKNTGISSKLLRLYASCGHIESAHQVFDEMSKRNESAFPW 416

Query: 364 NSLISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHVVR 423
           NSLISGYAELG YEDALA+YFQMEEEGVEPD +TFPR LKAC GIG I++GEAVHR VVR
Sbjct: 417 NSLISGYAELGQYEDALAIYFQMEEEGVEPDRYTFPRALKACAGIGLIQIGEAVHRDVVR 476

Query: 424 SGFAGDIFVLNALVDMYAKCGDIMRARKVFDQIVSKDTVSWNSMLTGYTRHGLLLEALNT 483
            GF  D FVLNAL+DMYAKCGDI++AR+VFD I  KDTVSWNSMLTGY RHGLL+EAL  
Sbjct: 477 KGFGNDGFVLNALIDMYAKCGDIVKARRVFDNIACKDTVSWNSMLTGYIRHGLLVEALEV 536

Query: 484 FDQMIQEGYEPDSVALSTMISNISSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGK 543
           F  MI+EGYEPD VA+ST++S + S K  L IHGW +R G EWNLS+ N+LI +Y+N GK
Sbjct: 537 FRGMIREGYEPDPVAMSTILSGVWSLKIALQIHGWILRRGNEWNLSVVNALIVVYSNHGK 596

Query: 544 INRARWLFEQMPERDIVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAH 603
           ++RA WLF ++PE D+VSWN+IIS HS   +AL YFE M S G LPDS+TFV++LS CAH
Sbjct: 597 LDRASWLFHRIPEPDVVSWNSIISGHSKRPEALVYFEQMVSGGTLPDSITFVAILSACAH 656

Query: 604 LSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNLYGRAGLIEEAYRIITNGMEVEAGPTVW 663
           L  V++G +L+S+M+ KY I P +EHYACMVNLYGRAGLI+EA+ +I   ME EAGPTVW
Sbjct: 657 LGFVRDGEQLFSLMRKKYAINPIMEHYACMVNLYGRAGLIDEAFTLIVERMEFEAGPTVW 716

Query: 664 GALLYACYLHGNVDIAEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAER 723
           GALL+AC +HG++D+ E+AA+ LFE EPDNE NF+LL KIY NAGR+ED +RV  MM +R
Sbjct: 717 GALLHACSVHGHIDVGEIAAQNLFELEPDNEHNFELLKKIYSNAGRLEDVERVSKMMLDR 773

[Close]

BLAST of Carg08007 vs. ExPASy TrEMBL
Match: A0A1R3ITD5 (Adenylate kinase OS=Corchorus capsularis OX=210143 GN=CCACVL1_09972 PE=3 SV=1)

HSP 1 Score: 988.0 bits (2553), Expect = 2.1e-284
Identity = 488/720 (67.78%), Postives = 575/720 (79.86%), Query Frame = 0


Query: 4   GGPGSGKGTQCMKIVENFGFTHLSAGDILRREIASNSADGTMILDTIKEGKIVPSELTVK 63
           GGPGSGKGTQC+KIVE FGF HLSAGD+LRREIA N+ADG MILDTIKEGKIVPSE+TVK
Sbjct: 42  GGPGSGKGTQCIKIVETFGFKHLSAGDLLRREIACNTADGAMILDTIKEGKIVPSEVTVK 101

Query: 64  LIQKEMESSDNYKFLIDGFPRSEDNRIAFEQIIGAEPDIVLFFDCPEDEMMKRVLNRNQG 123
           LIQKE+ESSDN+K LIDGFPRSE+NRIAFE+I+GAEP+IVLFFDCPE+EM+KRVL+RNQG
Sbjct: 102 LIQKEIESSDNHKILIDGFPRSEENRIAFEKIVGAEPNIVLFFDCPEEEMVKRVLSRNQG 161

Query: 124 RVDDNVDTIKKRLKVFSALNLPVVKYYLERGKLYKINAVGTVDEIYKQVYPLFAQFNFES 183
           RVDDN+DTI+KRLKVF ALNLPV+ YY +RGKLY INAVGTVDEI++QV P+F  F    
Sbjct: 162 RVDDNIDTIRKRLKVFEALNLPVINYYSQRGKLYTINAVGTVDEIFEQVRPVFNSFE--- 221

Query: 184 IADHCLIIFVQQQMLISLRFSISPITSLRLFCSSGPKKSKKERRKLLQEKLIRISKAKEA 243
                         +++L       T L   CSS  KK+KK  R+ L  K ++ SK    
Sbjct: 222 ----------SDPKMVALLSPSFHSTKLTFHCSSKSKKNKK--REQLNRKQLQKSK---R 281

Query: 244 TRLPFPKSSSTPLLIHHKPFSQSKIQALDAVLNDLEASLHNGVPIDAEIFSSLLETCYQL 303
              P+P+SS TPLLI+HKPF+Q+++QALDAV+ DLEAS+  G+ ID EIF+SLLETCYQL
Sbjct: 282 IAFPYPESSPTPLLINHKPFTQTRLQALDAVVQDLEASVKKGINIDTEIFASLLETCYQL 341

Query: 304 RALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNS 363
            ++DHGI++H LIP   LRRN G+SSKLLRLYAS G++E AHQVFDEM +RN SAF WNS
Sbjct: 342 NSIDHGIKVHSLIPKTMLRRNTGISSKLLRLYASSGHIESAHQVFDEMYKRNESAFPWNS 401

Query: 364 LISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHVVRSG 423
           LISGYAELG YEDALALYFQMEEEGV PD FTFPR LKAC GIG I++GEAVHR VVR G
Sbjct: 402 LISGYAELGQYEDALALYFQMEEEGVGPDRFTFPRALKACAGIGMIQIGEAVHRDVVRKG 461

Query: 424 FAGDIFVLNALVDMYAKCGDIMRARKVFDQIVSKDTVSWNSMLTGYTRHGLLLEALNTFD 483
           F  D FVLNAL DMYAKCGDI++AR+VFD IV KD VSWNSMLT Y RHGLL EAL  F 
Sbjct: 462 FGNDGFVLNALCDMYAKCGDIVKARRVFDSIVYKDMVSWNSMLTSYIRHGLLFEALEVFR 521

Query: 484 QMIQEGYEPDSVALSTMISNISSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKIN 543
            MIQEG++PD +A+ST++S  SS K    IHGW +R GIEWNLS+ N+LI +Y+   K +
Sbjct: 522 GMIQEGFDPDPIAMSTVLSGFSSLKIAAQIHGWVLRRGIEWNLSVVNALILVYSKHEKFD 581

Query: 544 RARWLFEQMPERDIVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLS 603
           +A WLF +MP+RDIVSWN+IIS H    +AL YFE MES G  PD++TFV++LS CAHL 
Sbjct: 582 QAGWLFHRMPDRDIVSWNSIISGHCKHPQALKYFEQMESSGTSPDTITFVAILSACAHLG 641

Query: 604 LVKEGGKLYSVMKGKYGIRPTIEHYACMVNLYGRAGLIEEAYRIITNGMEVEAGPTVWGA 663
           LVK+G +L+S+M+ KY I PT+EHYACMVNLYGRAGLI+EAY +I   ME +AGPTVWGA
Sbjct: 642 LVKDGEQLFSLMRKKYAINPTMEHYACMVNLYGRAGLIDEAYNLIVERMEFDAGPTVWGA 701

Query: 664 LLYACYLHGNVDIAEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGL 723
           LLYAC +HGNVDI E+AA  LFE EPDNE NF+LLMKIY NAGR+ED +RVR MM +RGL
Sbjct: 702 LLYACSVHGNVDIGEIAARNLFELEPDNEHNFELLMKIYSNAGRLEDVERVRTMMLDRGL 743

[Close]

BLAST of Carg08007 vs. TAIR 10
Match: AT4G25270.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 625.2 bits (1611), Expect = 6.7e-179
Identity = 302/510 (59.22%), Postives = 386/510 (75.69%), Query Frame = 0


Query: 216 SSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPLLIHHKPFSQSKIQALDAVL 275
           SS  KK  +  ++L Q +  + +     T L F K S TPLLI  +   +++++ALD+V+
Sbjct: 18  SSSMKKKPRHHQQLKQHRQNQYNN-NGFTSLSFTKPSPTPLLIEKQSIHRTQLEALDSVI 77

Query: 276 NDLEASLHNGVPI-DAEIFSSLLETCYQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRL 335
            DLE S   G+ + + EIF+SLLETCY LRA+DHG+R+H LIP   LR N+G+SSKL+RL
Sbjct: 78  TDLETSAQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRL 137

Query: 336 YASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYEDALALYFQMEEEGVEPDHF 395
           YAS GY E AH+VFD M +R+ S F+WNSLISGYAELG YEDA+ALYFQM E+GV+PD F
Sbjct: 138 YASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRF 197

Query: 396 TFPRVLKACGGIGSIRVGEAVHRHVVRSGFAGDIFVLNALVDMYAKCGDIMRARKVFDQI 455
           TFPRVLKACGGIGS+++GEA+HR +V+ GF  D++VLNALV MYAKCGDI++AR VFD I
Sbjct: 198 TFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMI 257

Query: 456 VSKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVALSTMISNISSSKFKLHIH 515
             KD VSWNSMLTGY  HGLL EAL+ F  M+Q G EPD VA+S++++ + S K    +H
Sbjct: 258 PHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLH 317

Query: 516 GWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPERDIVSWNTIISAHSNTSKAL 575
           GW IR G+EW LS+AN+LI +Y+  G++ +A ++F+QM ERD VSWN IISAHS  S  L
Sbjct: 318 GWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNGL 377

Query: 576 TYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNL 635
            YFE M      PD +TFVS+LS CA+  +V++G +L+S+M  +YGI P +EHYACMVNL
Sbjct: 378 KYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNL 437

Query: 636 YGRAGLIEEAYRIITNGMEVEAGPTVWGALLYACYLHGNVDIAEVAAEKLFESEPDNELN 695
           YGRAG++EEAY +I   M +EAGPTVWGALLYACYLHGN DI EVAA++LFE EPDNE N
Sbjct: 438 YGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHN 497

Query: 696 FKLLMKIYGNAGRIEDEKRVRLMMAERGLD 725
           F+LL++IY  A R ED +RVR MM +RGL+
Sbjct: 498 FELLIRIYSKAKRAEDVERVRQMMVDRGLE 526

[Close]

BLAST of Carg08007 vs. TAIR 10
Match: AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 310.8 bits (795), Expect = 2.8e-84
Identity = 165/446 (37.00%), Postives = 270/446 (60.54%), Query Frame = 0


Query: 291 EIFSSLLETCYQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDE 350
           + +  L+  C    +L   +R+HR I  N   ++  +++KL+ +Y+  G ++ A +VFD+
Sbjct: 78  QTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDK 137

Query: 351 MCQRNLSAFSWNSLISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLKACGG----I 410
             +R +  + WN+L       G  E+ L LY++M   GVE D FT+  VLKAC      +
Sbjct: 138 TRKRTI--YVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTV 197

Query: 411 GSIRVGEAVHRHVVRSGFAGDIFVLNALVDMYAKCGDIMRARKVFDQIVSKDTVSWNSML 470
             +  G+ +H H+ R G++  ++++  LVDMYA+ G +  A  VF  +  ++ VSW++M+
Sbjct: 198 NHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMI 257

Query: 471 TGYTRHGLLLEALNTFDQMIQEGYE--PDSVALSTMISNISS----SKFKLHIHGWAIRH 530
             Y ++G   EAL TF +M++E  +  P+SV + +++   +S     + KL IHG+ +R 
Sbjct: 258 ACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKL-IHGYILRR 317

Query: 531 GIEWNLSIANSLIAMYANSGKINRARWLFEQMPERDIVSWNTIISA---HSNTSKALTYF 590
           G++  L + ++L+ MY   GK+   + +F++M +RD+VSWN++IS+   H    KA+  F
Sbjct: 318 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIF 377

Query: 591 EVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNLYGR 650
           E M + G  P  VTFVS+L  C+H  LV+EG +L+  M   +GI+P IEHYACMV+L GR
Sbjct: 378 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGR 437

Query: 651 AGLIEEAYRIITNGMEVEAGPTVWGALLYACYLHGNVDIAEVAAEKLFESEPDNELNFKL 710
           A  ++EA +++ + M  E GP VWG+LL +C +HGNV++AE A+ +LF  EP N  N+ L
Sbjct: 438 ANRLDEAAKMVQD-MRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVL 497

Query: 711 LMKIYGNAGRIEDEKRVRLMMAERGL 724
           L  IY  A   ++ KRV+ ++  RGL
Sbjct: 498 LADIYAEAQMWDEVKRVKKLLEHRGL 519

[Close]

BLAST of Carg08007 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 301.2 bits (770), Expect = 2.2e-81
Identity = 163/449 (36.30%), Postives = 256/449 (57.02%), Query Frame = 0


Query: 282 LHNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYM 341
           L +G+ ID     S+   C   R +  G  +H +       R     + LL +Y+  G +
Sbjct: 288 LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 347

Query: 342 EDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLK 401
           + A  VF EM  R  S  S+ S+I+GYA  GL  +A+ L+ +MEEEG+ PD +T   VL 
Sbjct: 348 DSAKAVFREMSDR--SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 407

Query: 402 ACGGIGSIRVGEAVHRHVVRSGFAGDIFVLNALVDMYAKCGDIMRARKVFDQIVSKDTVS 461
            C     +  G+ VH  +  +    DIFV NAL+DMYAKCG +  A  VF ++  KD +S
Sbjct: 408 CCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS 467

Query: 462 WNSMLTGYTRHGLLLEALNTFDQMIQE-GYEPDSVALSTMI---SNISSSKFKLHIHGWA 521
           WN+++ GY+++    EAL+ F+ +++E  + PD   ++ ++   +++S+      IHG+ 
Sbjct: 468 WNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYI 527

Query: 522 IRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPERDIVSWNTIISA---HSNTSKAL 581
           +R+G   +  +ANSL+ MYA  G +  A  LF+ +  +D+VSW  +I+    H    +A+
Sbjct: 528 MRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAI 587

Query: 582 TYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNL 641
             F  M   G+  D ++FVSLL  C+H  LV EG + +++M+ +  I PT+EHYAC+V++
Sbjct: 588 ALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDM 647

Query: 642 YGRAGLIEEAYRIITNGMEVEAGPTVWGALLYACYLHGNVDIAEVAAEKLFESEPDNELN 701
             R G + +AYR I N M +    T+WGALL  C +H +V +AE  AEK+FE EP+N   
Sbjct: 648 LARTGDLIKAYRFIEN-MPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGY 707

Query: 702 FKLLMKIYGNAGRIEDEKRVRLMMAERGL 724
           + L+  IY  A + E  KR+R  + +RGL
Sbjct: 708 YVLMANIYAEAEKWEQVKRLRKRIGQRGL 733

[Close]

BLAST of Carg08007 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 290.0 bits (741), Expect = 5.1e-78
Identity = 154/447 (34.45%), Postives = 255/447 (57.05%), Query Frame = 0


Query: 285 GVPIDAEIFSSLLETCYQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYMEDA 344
           G  +D  + +SL+    Q   L+   ++    P     R+V   + L++ YAS GY+E+A
Sbjct: 164 GCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP----HRDVVSYTALIKGYASRGYIENA 223

Query: 345 HQVFDEMCQRNLSAFSWNSLISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLKACG 404
            ++FDE+  +++   SWN++ISGYAE G Y++AL L+  M +  V PD  T   V+ AC 
Sbjct: 224 QKLFDEIPVKDV--VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 283

Query: 405 GIGSIRVGEAVHRHVVRSGFAGDIFVLNALVDMYAKCGDIMRARKVFDQIVSKDTVSWNS 464
             GSI +G  VH  +   GF  ++ ++NAL+D+Y+KCG++  A  +F+++  KD +SWN+
Sbjct: 284 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 343

Query: 465 MLTGYTRHGLLLEALNTFDQMIQEGYEPDSVALSTMI---SNISSSKFKLHIHGWAIRH- 524
           ++ GYT   L  EAL  F +M++ G  P+ V + +++   +++ +      IH +  +  
Sbjct: 344 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 403

Query: 525 -GIEWNLSIANSLIAMYANSGKINRARWLFEQMPERDIVSWNTII---SAHSNTSKALTY 584
            G+    S+  SLI MYA  G I  A  +F  +  + + SWN +I   + H     +   
Sbjct: 404 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 463

Query: 585 FEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNLYG 644
           F  M  +G+ PD +TFV LLS C+H  ++  G  ++  M   Y + P +EHY CM++L G
Sbjct: 464 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 523

Query: 645 RAGLIEEAYRIITNGMEVEAGPTVWGALLYACYLHGNVDIAEVAAEKLFESEPDNELNFK 704
            +GL +EA  +I N ME+E    +W +LL AC +HGNV++ E  AE L + EP+N  ++ 
Sbjct: 524 HSGLFKEAEEMI-NMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYV 583

Query: 705 LLMKIYGNAGRIEDEKRVRLMMAERGL 724
           LL  IY +AGR  +  + R ++ ++G+
Sbjct: 584 LLSNIYASAGRWNEVAKTRALLNDKGM 603

[Close]

BLAST of Carg08007 vs. TAIR 10
Match: AT1G06140.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 289.3 bits (739), Expect = 8.8e-78
Identity = 167/433 (38.57%), Postives = 246/433 (56.81%), Query Frame = 0


Query: 297 LETCYQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNL 356
           ++ C  L  L++GI IH L   N L ++  V+  L+ +YA  G ME A +VFDE+  RN 
Sbjct: 116 IKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRN- 175

Query: 357 SAFSWNSLISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVH 416
            +  W  L+ GY +     +   L+  M + G+  D  T   ++KACG + + +VG+ VH
Sbjct: 176 -SVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVH 235

Query: 417 RHVVRSGFAGDIFVLNA-LVDMYAKCGDIMRARKVFDQIVSKDTVSWNSMLTGYTRHGLL 476
              +R  F      L A ++DMY KC  +  ARK+F+  V ++ V W ++++G+ +    
Sbjct: 236 GVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERA 295

Query: 477 LEALNTFDQMIQEGYEPDSVALSTMI---SNISSSKFKLHIHGWAIRHGIEWNLSIANSL 536
           +EA + F QM++E   P+   L+ ++   S++ S +    +HG+ IR+GIE +     S 
Sbjct: 296 VEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSF 355

Query: 537 IAMYANSGKINRARWLFEQMPERDIVSWNTIISA---HSNTSKALTYFEVMESLGVLPDS 596
           I MYA  G I  AR +F+ MPER+++SW+++I+A   +    +AL  F  M+S  V+P+S
Sbjct: 356 IDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNS 415

Query: 597 VTFVSLLSTCAHLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNLYGRAGLIEEAYRIIT 656
           VTFVSLLS C+H   VKEG K +  M   YG+ P  EHYACMV+L GRAG I EA   I 
Sbjct: 416 VTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFID 475

Query: 657 NGMEVEAGPTVWGALLYACYLHGNVDIAEVAAEKLFESEPDNELNFKLLMKIYGNAGRIE 716
           N M V+   + WGALL AC +H  VD+A   AEKL   EP+    + LL  IY +AG  E
Sbjct: 476 N-MPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWE 535

Query: 717 DEKRVRLMMAERG 723
               VR  M  +G
Sbjct: 536 MVNCVRRKMGIKG 545

The following BLAST results are available for this feature:

BLAST of Carg08007 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030831.1	0.0e+00	100.00	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]
KAG6600165.1	1.7e-304	100.00	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]
XP_022942651.1	1.2e-302	99.24	pentatricopeptide repeat-containing protein At4g25270, chloroplastic [Cucurbita ...	[more]
XP_023549868.1	3.8e-301	98.68	pentatricopeptide repeat-containing protein At4g25270, chloroplastic [Cucurbita ...	[more]
XP_022993795.1	8.5e-301	98.49	pentatricopeptide repeat-containing protein At4g25270, chloroplastic [Cucurbita ...	[more]

BLAST of Carg08007 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SB36	9.5e-178	59.22	Pentatricopeptide repeat-containing protein At4g25270, chloroplastic OS=Arabidop...	[more]
Q9STF3	4.0e-83	37.00	Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop...	[more]
Q9SN39	3.1e-80	36.30	Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t...	[more]
Q9LN01	7.2e-77	34.45	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
O24464	9.4e-77	79.89	UMP-CMP kinase OS=Prunus armeniaca OX=36596 PE=2 SV=1	[more]

BLAST of Carg08007 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FPF9	5.7e-303	99.24	pentatricopeptide repeat-containing protein At4g25270, chloroplastic OS=Cucurbit...	[more]
A0A6J1JZI1	4.1e-301	98.49	pentatricopeptide repeat-containing protein At4g25270, chloroplastic OS=Cucurbit...	[more]
A0A6J1AF96	1.7e-291	68.70	UMP-CMP kinase OS=Herrania umbratica OX=108875 GN=LOC110417541 PE=3 SV=1	[more]
A0A061FZF0	2.2e-286	67.87	UMP-CMP kinase OS=Theobroma cacao OX=3641 GN=TCM_014953 PE=3 SV=1	[more]
A0A1R3ITD5	2.1e-284	67.78	Adenylate kinase OS=Corchorus capsularis OX=210143 GN=CCACVL1_09972 PE=3 SV=1	[more]

BLAST of Carg08007 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25270.1	6.7e-179	59.22	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G46790.1	2.8e-84	37.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G18750.1	2.2e-81	36.30	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G08070.1	5.1e-78	34.45	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G06140.1	8.8e-78	38.57	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000850	Adenylate kinase/UMP-CMP kinase	PRINTS	PR00094	ADENYLTKNASE	coord: 77..93 score: 45.46 coord: 124..139 score: 49.36 coord: 1..14 score: 64.16 coord: 29..43 score: 43.28 coord: 141..155 score: 29.83
IPR000850	Adenylate kinase/UMP-CMP kinase	HAMAP	MF_00235	Adenylate_kinase_Adk	coord: 1..177 score: 35.786613
IPR000850	Adenylate kinase/UMP-CMP kinase	CDD	cd01428	ADK	coord: 1..168 e-value: 3.77333E-60 score: 199.0
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 530..557 e-value: 6.6E-4 score: 19.8 coord: 628..647 e-value: 0.43 score: 10.9 coord: 331..355 e-value: 0.01 score: 16.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 460..494 e-value: 1.0E-7 score: 29.6 coord: 359..392 e-value: 1.8E-9 score: 35.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 457..502 e-value: 2.1E-10 score: 40.6 coord: 358..403 e-value: 4.5E-10 score: 39.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 427..457 score: 8.933517
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 458..492 score: 13.033043
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 357..391 score: 13.065928
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 525..559 score: 9.832344
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 265..410 e-value: 2.2E-27 score: 98.2 coord: 509..569 e-value: 3.7E-9 score: 38.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 570..724 e-value: 1.7E-19 score: 72.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 411..508 e-value: 6.7E-24 score: 86.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..179 e-value: 2.1E-55 score: 189.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..180
None	No IPR available	PFAM	PF00406	ADK	coord: 3..154 e-value: 1.1E-43 score: 148.9
None	No IPR available	PANTHER	PTHR47925:SF105	SUBFAMILY NOT NAMED	coord: 232..725
None	No IPR available	PANTHER	PTHR47925	OS01G0913400 PROTEIN-RELATED	coord: 232..725
IPR006266	UMP-CMP kinase	TIGRFAM	TIGR01359	TIGR01359	coord: 4..176 e-value: 2.4E-70 score: 234.2
IPR033690	Adenylate kinase, conserved site	PROSITE	PS00113	ADENYLATE_KINASE	coord: 77..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08007-RA	Carg08007-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process
biological_process	GO:0046940	nucleoside monophosphate phosphorylation
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006221	pyrimidine nucleotide biosynthetic process
biological_process	GO:0006139	nucleobase-containing compound metabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004017	adenylate kinase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0036430	CMP kinase activity
molecular_function	GO:0036431	dCMP kinase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0033862	UMP kinase activity
molecular_function	GO:0004127	cytidylate kinase activity
molecular_function	GO:0019205	nucleobase-containing compound kinase activity
molecular_function	GO:0009041	uridylate kinase activity