Carg07979 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07979
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	zinc finger protein 5-like
Location	Carg_Chr04: 1580345 .. 1580914 (-)
RNA-Seq Expression	Carg07979
Synteny	Carg07979

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAAGAACTCGTCGAGCTATAATTTGGAAGAACACGAAAGTGGGTTATTTTCTTCAACCTCTAATGTTGAAAAAAAAGTAAAACTTTTTGGATTTGAGCTAAACCCATCAAAGAACCATGAACTTGGATCAAGTTCTTGCTTGAATGGCGAAGGCGATGAGAGTGTAAACTCTTCAACAACGGTCTGTTTTGAAAGAGCAGAGCCCAAATTTGAGTGCCAATATTGTTTGAAGGAGTTTAGAAATTCGCAAGCTTTGGGAGGCCATCAAAATGCCCACAAGAAAGAGAGGCTGAAGAAGAAGAAGGAGAAGATGGAGCTTCAAGCTACAAATGCTTCCCTCACTTATCTTCTCTACACTCATAATTCTTCGCAGATTAGTTTCAGTCAAAACGACGCTAAGTTTATCCATTTTGATGGTTCTGTGCCGCCGGCCGACCGGTCGTCCGGCGCCGACAAGGCTGTCGGTTATGTGTCTTCTTCTTCTTCTTCTTCTTCTTGTTTGCCTGTTTGTAATGATCATAGGCGTTCTTGTAAGTCTTTGGATCTTCAACTTGGTTTCAATTGA

mRNA sequence

ATGGGAAAGAACTCGTCGAGCTATAATTTGGAAGAACACGAAAGTGGGTTATTTTCTTCAACCTCTAATGTTGAAAAAAAAGTAAAACTTTTTGGATTTGAGCTAAACCCATCAAAGAACCATGAACTTGGATCAAGTTCTTGCTTGAATGGCGAAGGCGATGAGAGTGTAAACTCTTCAACAACGGTCTGTTTTGAAAGAGCAGAGCCCAAATTTGAGTGCCAATATTGTTTGAAGGAGTTTAGAAATTCGCAAGCTTTGGGAGGCCATCAAAATGCCCACAAGAAAGAGAGGCTGAAGAAGAAGAAGGAGAAGATGGAGCTTCAAGCTACAAATGCTTCCCTCACTTATCTTCTCTACACTCATAATTCTTCGCAGATTAGTTTCAGTCAAAACGACGCTAAGTTTATCCATTTTGATGGTTCTGTGCCGCCGGCCGACCGGTCGTCCGGCGCCGACAAGGCTGTCGGTTATGTGTCTTCTTCTTCTTCTTCTTCTTCTTGTTTGCCTGTTTGTAATGATCATAGGCGTTCTTGTAAGTCTTTGGATCTTCAACTTGGTTTCAATTGA

Coding sequence (CDS)

ATGGGAAAGAACTCGTCGAGCTATAATTTGGAAGAACACGAAAGTGGGTTATTTTCTTCAACCTCTAATGTTGAAAAAAAAGTAAAACTTTTTGGATTTGAGCTAAACCCATCAAAGAACCATGAACTTGGATCAAGTTCTTGCTTGAATGGCGAAGGCGATGAGAGTGTAAACTCTTCAACAACGGTCTGTTTTGAAAGAGCAGAGCCCAAATTTGAGTGCCAATATTGTTTGAAGGAGTTTAGAAATTCGCAAGCTTTGGGAGGCCATCAAAATGCCCACAAGAAAGAGAGGCTGAAGAAGAAGAAGGAGAAGATGGAGCTTCAAGCTACAAATGCTTCCCTCACTTATCTTCTCTACACTCATAATTCTTCGCAGATTAGTTTCAGTCAAAACGACGCTAAGTTTATCCATTTTGATGGTTCTGTGCCGCCGGCCGACCGGTCGTCCGGCGCCGACAAGGCTGTCGGTTATGTGTCTTCTTCTTCTTCTTCTTCTTCTTGTTTGCCTGTTTGTAATGATCATAGGCGTTCTTGTAAGTCTTTGGATCTTCAACTTGGTTTCAATTGA

Protein sequence

MGKNSSSYNLEEHESGLFSSTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSSTTVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLYTHNSSQISFSQNDAKFIHFDGSVPPADRSSGADKAVGYVSSSSSSSSCLPVCNDHRRSCKSLDLQLGFN

Homology

[Close]

BLAST of Carg07979 vs. NCBI nr
Match: KAG7030804.1 (Zinc finger protein GIS2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 371.7 bits (953), Expect = 3.8e-99
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MGKNSSSYNLEEHESGLFSSTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSS 60
           MGKNSSSYNLEEHESGLFSSTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSS
Sbjct: 1   MGKNSSSYNLEEHESGLFSSTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSS 60

Query: 61  TTVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLY 120
           TTVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLY
Sbjct: 61  TTVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLY 120

Query: 121 THNSSQISFSQNDAKFIHFDGSVPPADRSSGADKAVGYVSSSSSSSSCLPVCNDHRRSCK 180
           THNSSQISFSQNDAKFIHFDGSVPPADRSSGADKAVGYVSSSSSSSSCLPVCNDHRRSCK
Sbjct: 121 THNSSQISFSQNDAKFIHFDGSVPPADRSSGADKAVGYVSSSSSSSSCLPVCNDHRRSCK 180

Query: 181 SLDLQLGFN 190
           SLDLQLGFN
Sbjct: 181 SLDLQLGFN 189

[Close]

BLAST of Carg07979 vs. NCBI nr
Match: KAG6600139.1 (Zinc finger protein GIS2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 365.9 bits (938), Expect = 2.1e-97
Identity = 188/189 (99.47%), Postives = 188/189 (99.47%), Query Frame = 0


Query: 1   MGKNSSSYNLEEHESGLFSSTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSS 60
           MGKNSSSYNLEEHESGLFSSTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSS
Sbjct: 1   MGKNSSSYNLEEHESGLFSSTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSS 60

Query: 61  TTVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLY 120
           TTVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLY
Sbjct: 61  TTVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLY 120

Query: 121 THNSSQISFSQNDAKFIHFDGSVPPADRSSGADKAVGYVSSSSSSSSCLPVCNDHRRSCK 180
           THNSSQISFSQNDAKFIHFDGSVPPADRSSGADKAVGYV SSSSSSSCLPVCNDHRRSCK
Sbjct: 121 THNSSQISFSQNDAKFIHFDGSVPPADRSSGADKAVGYV-SSSSSSSCLPVCNDHRRSCK 180

Query: 181 SLDLQLGFN 190
           SLDLQLGFN
Sbjct: 181 SLDLQLGFN 188

[Close]

BLAST of Carg07979 vs. NCBI nr
Match: XP_022942790.1 (zinc finger protein 5-like [Cucurbita moschata])

HSP 1 Score: 347.4 bits (890), Expect = 7.6e-92
Identity = 180/189 (95.24%), Postives = 181/189 (95.77%), Query Frame = 0


Query: 1   MGKNSSSYNLEEHESGLFSSTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSS 60
           MGKNSSSYNLEEHESGLF+STSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSS
Sbjct: 1   MGKNSSSYNLEEHESGLFASTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSS 60

Query: 61  TTVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLY 120
           TTVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLY
Sbjct: 61  TTVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLY 120

Query: 121 THNSSQISFSQNDAKFIHFDGSVPPADRSSGADKAVGYVSSSSSSSSCLPVCNDHRRSCK 180
           THNSSQISFSQN AKFIHFDGSVPP      ADKAVGYVSSSSSSSS LPVCNDHRRSCK
Sbjct: 121 THNSSQISFSQNGAKFIHFDGSVPP------ADKAVGYVSSSSSSSSSLPVCNDHRRSCK 180

Query: 181 SLDLQLGFN 190
           SLDLQLGFN
Sbjct: 181 SLDLQLGFN 183

[Close]

BLAST of Carg07979 vs. NCBI nr
Match: XP_022985640.1 (zinc finger protein 5-like [Cucurbita maxima])

HSP 1 Score: 340.1 bits (871), Expect = 1.2e-89
Identity = 178/189 (94.18%), Postives = 178/189 (94.18%), Query Frame = 0


Query: 1   MGKNSSSYNLEEHESGLFSSTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSS 60
           MGKNSSSYNLEEHESGL SSTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSS
Sbjct: 1   MGKNSSSYNLEEHESGLSSSTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSS 60

Query: 61  TTVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLY 120
           TTVCFER EPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLY
Sbjct: 61  TTVCFERPEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLY 120

Query: 121 THNSSQISFSQNDAKFIHFDGSVPPADRSSGADKAVGYVSSSSSSSSCLPVCNDHRRSCK 180
           THNSSQISFSQN AKFIHFDGSVPP      ADKAVGYV  SSSSSSCLPVCNDHRRSCK
Sbjct: 121 THNSSQISFSQNGAKFIHFDGSVPP------ADKAVGYV--SSSSSSCLPVCNDHRRSCK 180

Query: 181 SLDLQLGFN 190
           SLDLQLGFN
Sbjct: 181 SLDLQLGFN 181

[Close]

BLAST of Carg07979 vs. NCBI nr
Match: XP_023516645.1 (zinc finger protein 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.2 bits (827), Expect = 1.5e-84
Identity = 170/189 (89.95%), Postives = 172/189 (91.01%), Query Frame = 0


Query: 1   MGKNSSSYNLEEHESGLFSSTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSS 60
           MGK SSSYNLEEHESGLFSSTSNVEKKVKLFGFELNPS NHELGSS CLNGEGDESVNSS
Sbjct: 1   MGKKSSSYNLEEHESGLFSSTSNVEKKVKLFGFELNPSNNHELGSSCCLNGEGDESVNSS 60

Query: 61  TTVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLY 120
           TTVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLY
Sbjct: 61  TTVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLY 120

Query: 121 THNSSQISFSQNDAKFIHFDGSVPPADRSSGADKAVGYVSSSSSSSSCLPVCNDHRRSCK 180
           THNSS I+F+QN AKFIHFDGS PP       DKAVGYV SSSSSSSCLPV NDHRRS K
Sbjct: 121 THNSSHITFTQNGAKFIHFDGSAPP------PDKAVGYV-SSSSSSSCLPVSNDHRRSSK 180

Query: 181 SLDLQLGFN 190
           SLDL LGFN
Sbjct: 181 SLDLHLGFN 182

[Close]

BLAST of Carg07979 vs. ExPASy Swiss-Prot
Match: Q39264 (Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 8.3e-17
Identity = 58/117 (49.57%), Postives = 73/117 (62.39%), Query Frame = 0


Query: 7   SYNLEEHESGLFSSTSNVEKKVKLFGFEL-NPSKNHELGSSSCLNGEGDESVNSSTTVCF 66
           S N     +G  SS S+ +K +KLFGFEL + S+  E+ ++        ESV+SST    
Sbjct: 2   SINPTMSRTGESSSGSSSDKTIKLFGFELISGSRTPEITTA--------ESVSSSTNTTS 61

Query: 67  ERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLYTH 123
                + ECQYC KEF NSQALGGHQNAHKKERLKKK  +++LQA  AS+ Y L  H
Sbjct: 62  LTVMKRHECQYCGKEFANSQALGGHQNAHKKERLKKK--RLQLQARRASIGYYLTNH 108

[Close]

BLAST of Carg07979 vs. ExPASy Swiss-Prot
Match: Q9FG05 (Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.9e-09
Identity = 37/92 (40.22%), Postives = 51/92 (55.43%), Query Frame = 0


Query: 19  SSTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSSTTVCFERAEPKFECQYCL 78
           +S S  E+ ++LFGFE   S  HE   S     E +ES+        +  E +F+C YC 
Sbjct: 10  NSFSPKERPIRLFGFEFGAS--HEESESKDNYNENNESIKD------DNKEKRFKCHYCF 69

Query: 79  KEFRNSQALGGHQNAHKKERLKKKKEKMELQA 111
           + F  SQALGGHQNAHK+ER + K+  +   A
Sbjct: 70  RNFPTSQALGGHQNAHKRERQQTKRFNLHSNA 93

[Close]

BLAST of Carg07979 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.1e-08
Identity = 36/79 (45.57%), Postives = 45/79 (56.96%), Query Frame = 0


Query: 28  VKLFGFELNPSKNHELGSSSCLNGEGDESVNSSTTVCFERAEPKFECQYCLKEFRNSQAL 87
           +KLFG  L  + + +  SS    G G  S +            K+ECQYC +EF NSQAL
Sbjct: 8   LKLFGINLLETTSVQNQSSEPRPGSGSGSESR-----------KYECQYCCREFANSQAL 67

Query: 88  GGHQNAHKKERLKKKKEKM 107
           GGHQNAHKKER   K+ +M
Sbjct: 68  GGHQNAHKKERQLLKRAQM 75

[Close]

BLAST of Carg07979 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-07
Identity = 44/117 (37.61%), Postives = 58/117 (49.57%), Query Frame = 0


Query: 20  STSNVEKKVKLFGF------------------ELNPSKNHELGSSSCLNGEGDESVNSST 79
           S+     ++KLFGF                   ++P +      SS  +G G  S     
Sbjct: 7   SSKTTTSRLKLFGFSVDGEEDFSDQSVKTNLSSVSPERGEFPAGSSGRSGGGVRSRGGGG 66

Query: 80  TVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQAT-NASLTY 118
                  E K+ECQYC +EF NSQALGGHQNAHKKER + K  + +LQAT NA+  +
Sbjct: 67  ----GGGERKYECQYCCREFGNSQALGGHQNAHKKERQQLK--RAQLQATRNAAANF 117

[Close]

BLAST of Carg07979 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.0e-06
Identity = 33/77 (42.86%), Postives = 44/77 (57.14%), Query Frame = 0


Query: 39  KNHELGSSSCLNGEGDESVNSSTT---VCFERAEPKFECQYCLKEFRNSQALGGHQNAHK 98
           KNH+L     L      S +SS+T    C E+    F C YC ++F +SQALGGHQNAHK
Sbjct: 17  KNHQLNLELVLEPSSMSSSSSSSTNSSSCLEQPR-VFSCNYCQRKFYSSQALGGHQNAHK 76

Query: 99  KERLKKKKEKMELQATN 113
            ER   KK +   +++N
Sbjct: 77  LERTLAKKSRELFRSSN 92

[Close]

BLAST of Carg07979 vs. ExPASy TrEMBL
Match: A0A6J1FWX9 (zinc finger protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111447719 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 3.7e-92
Identity = 180/189 (95.24%), Postives = 181/189 (95.77%), Query Frame = 0


Query: 1   MGKNSSSYNLEEHESGLFSSTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSS 60
           MGKNSSSYNLEEHESGLF+STSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSS
Sbjct: 1   MGKNSSSYNLEEHESGLFASTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSS 60

Query: 61  TTVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLY 120
           TTVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLY
Sbjct: 61  TTVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLY 120

Query: 121 THNSSQISFSQNDAKFIHFDGSVPPADRSSGADKAVGYVSSSSSSSSCLPVCNDHRRSCK 180
           THNSSQISFSQN AKFIHFDGSVPP      ADKAVGYVSSSSSSSS LPVCNDHRRSCK
Sbjct: 121 THNSSQISFSQNGAKFIHFDGSVPP------ADKAVGYVSSSSSSSSSLPVCNDHRRSCK 180

Query: 181 SLDLQLGFN 190
           SLDLQLGFN
Sbjct: 181 SLDLQLGFN 183

[Close]

BLAST of Carg07979 vs. ExPASy TrEMBL
Match: A0A6J1JBW1 (zinc finger protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111483638 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 5.9e-90
Identity = 178/189 (94.18%), Postives = 178/189 (94.18%), Query Frame = 0


Query: 1   MGKNSSSYNLEEHESGLFSSTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSS 60
           MGKNSSSYNLEEHESGL SSTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSS
Sbjct: 1   MGKNSSSYNLEEHESGLSSSTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSS 60

Query: 61  TTVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLY 120
           TTVCFER EPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLY
Sbjct: 61  TTVCFERPEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLY 120

Query: 121 THNSSQISFSQNDAKFIHFDGSVPPADRSSGADKAVGYVSSSSSSSSCLPVCNDHRRSCK 180
           THNSSQISFSQN AKFIHFDGSVPP      ADKAVGYV  SSSSSSCLPVCNDHRRSCK
Sbjct: 121 THNSSQISFSQNGAKFIHFDGSVPP------ADKAVGYV--SSSSSSCLPVCNDHRRSCK 180

Query: 181 SLDLQLGFN 190
           SLDLQLGFN
Sbjct: 181 SLDLQLGFN 181

[Close]

BLAST of Carg07979 vs. ExPASy TrEMBL
Match: A0A6J1DBL2 (zinc finger protein 5-like OS=Momordica charantia OX=3673 GN=LOC111019193 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 8.3e-44
Identity = 127/217 (58.53%), Postives = 141/217 (64.98%), Query Frame = 0


Query: 1   MGKNSSSYNLEEHESGLFSSTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSS 60
           MG  S   NLEE ESGLFSS    EKKVKLFGFEL PSKN   GS     GEGDESVNSS
Sbjct: 1   MGNESWGCNLEEGESGLFSSGGCGEKKVKLFGFELKPSKNDMSGS-----GEGDESVNSS 60

Query: 61  TTVCFERAE--------PKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATN 120
           TTV  ER+E        PKFECQYC KEF NSQALGGHQNAHKKERLKKK  +M+LQA  
Sbjct: 61  TTV--ERSEAAIVVIKRPKFECQYCFKEFTNSQALGGHQNAHKKERLKKK--RMQLQARK 120

Query: 121 ASLTY--------------LLYTHNSSQISFSQNDAKFIHFDG------SVPPADRSSGA 180
           A+L+Y               LY+H+SSQISFS NDA+FIHFD       ++   D SSG 
Sbjct: 121 ATLSYYLHPFQFQTSNNNNFLYSHDSSQISFSPNDAEFIHFDPQERRLFTLTQPDTSSGP 180

Query: 181 DKAVGYVSSSSSSSSCLPVCNDHRRSCKSLDLQLGFN 190
              + + SSSSSSSS LP+ +    SCKSLDL LG N
Sbjct: 181 PNPLVFYSSSSSSSS-LPL-SKQNPSCKSLDLHLGLN 206

[Close]

BLAST of Carg07979 vs. ExPASy TrEMBL
Match: A0A6J1KAH9 (zinc finger protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111492522 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 9.5e-40
Identity = 126/228 (55.26%), Postives = 145/228 (63.60%), Query Frame = 0


Query: 1   MGKNSSSYNLEEHESGLFSSTSNVEKKVKLFGFELNPSKNHELGSSSCLN---GEGDESV 60
           MGK S   N E+ ESGL S  S +EKK+KLFGFELNPS+  EL ++  L    GE +ESV
Sbjct: 2   MGKASLGCNFEDRESGLCSEGSCMEKKLKLFGFELNPSE--ELATNWRLKGSVGEANESV 61

Query: 61  NSSTTVCF-ERAE-------PKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQ 120
           +SSTTV F ER+E       PKFECQYC KEF NSQALGGHQNAHKKERLKKK  KM+LQ
Sbjct: 62  SSSTTVSFGERSEQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKK--KMQLQ 121

Query: 121 ATNASLTYLL------------------YTH-NSSQISFSQNDAKFIHFDGSVP------ 180
           A  A+L+Y                    YTH +SS ISF+QNDA+FIHF+  +P      
Sbjct: 122 ARKATLSYYYLHPFQTASNNFLYHFPSSYTHDDSSLISFNQNDAEFIHFESFLPPERRLF 181

Query: 181 ---PADRSSGADKAVGYVSSSSSSSSCLPVCNDHRRSCKSLDLQLGFN 190
              PAD SS A K V +  SSSSSSS  PV +    SCKSLDLQLG N
Sbjct: 182 SLTPADSSSAAAKPVVF-QSSSSSSSLPPVVSP---SCKSLDLQLGLN 221

[Close]

BLAST of Carg07979 vs. ExPASy TrEMBL
Match: A0A6J1GY76 (zinc finger protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111458285 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.5e-37
Identity = 118/224 (52.68%), Postives = 138/224 (61.61%), Query Frame = 0


Query: 1   MGKNSSSYNLEEHESGLFSSTSNVEKKVKLFGFELNPSKNHELGSSSCLN---GEGDESV 60
           MGK S   N E+ ESGL S  S +EKK+KLFGFELNPS+  EL ++  L    GE +ESV
Sbjct: 2   MGKASLECNFEDRESGLCSEGSCMEKKLKLFGFELNPSE--ELATNWRLKGSVGEANESV 61

Query: 61  NSSTTVCFERA---EPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNAS 120
           +SSTTV  +     +PKFECQYC KEF NSQALGGHQNAHKKERLKKK  KM+LQA  A+
Sbjct: 62  SSSTTVSEQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKK--KMQLQARKAT 121

Query: 121 LTYLL------------------YTH--NSSQISFSQNDAKFIHFDGSVP---------P 180
           L+Y                    +TH  +SSQISF+QNDA+FIHF+  +P         P
Sbjct: 122 LSYYYLHPFQTASNNFLYHFPSSHTHHDDSSQISFNQNDAEFIHFESFLPPERRLFTLTP 181

Query: 181 ADRSSGADKAVGYVSSSSSSSSCLPVCNDHRRSCKSLDLQLGFN 190
           AD SS A K V + SSSS      P       SCKSLDLQLG N
Sbjct: 182 ADSSSAAAKPVVFQSSSSLPPVASP-------SCKSLDLQLGLN 214

[Close]

BLAST of Carg07979 vs. TAIR 10
Match: AT1G10480.1 (zinc finger protein 5 )

HSP 1 Score: 88.6 bits (218), Expect = 5.9e-18
Identity = 58/117 (49.57%), Postives = 73/117 (62.39%), Query Frame = 0


Query: 7   SYNLEEHESGLFSSTSNVEKKVKLFGFEL-NPSKNHELGSSSCLNGEGDESVNSSTTVCF 66
           S N     +G  SS S+ +K +KLFGFEL + S+  E+ ++        ESV+SST    
Sbjct: 2   SINPTMSRTGESSSGSSSDKTIKLFGFELISGSRTPEITTA--------ESVSSSTNTTS 61

Query: 67  ERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLYTH 123
                + ECQYC KEF NSQALGGHQNAHKKERLKKK  +++LQA  AS+ Y L  H
Sbjct: 62  LTVMKRHECQYCGKEFANSQALGGHQNAHKKERLKKK--RLQLQARRASIGYYLTNH 108

[Close]

BLAST of Carg07979 vs. TAIR 10
Match: AT5G06650.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 3.5e-10
Identity = 37/92 (40.22%), Postives = 51/92 (55.43%), Query Frame = 0


Query: 19  SSTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSSTTVCFERAEPKFECQYCL 78
           +S S  E+ ++LFGFE   S  HE   S     E +ES+        +  E +F+C YC 
Sbjct: 10  NSFSPKERPIRLFGFEFGAS--HEESESKDNYNENNESIKD------DNKEKRFKCHYCF 69

Query: 79  KEFRNSQALGGHQNAHKKERLKKKKEKMELQA 111
           + F  SQALGGHQNAHK+ER + K+  +   A
Sbjct: 70  RNFPTSQALGGHQNAHKRERQQTKRFNLHSNA 93

[Close]

BLAST of Carg07979 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 )

HSP 1 Score: 58.9 bits (141), Expect = 5.0e-09
Identity = 36/79 (45.57%), Postives = 45/79 (56.96%), Query Frame = 0


Query: 28  VKLFGFELNPSKNHELGSSSCLNGEGDESVNSSTTVCFERAEPKFECQYCLKEFRNSQAL 87
           +KLFG  L  + + +  SS    G G  S +            K+ECQYC +EF NSQAL
Sbjct: 8   LKLFGINLLETTSVQNQSSEPRPGSGSGSESR-----------KYECQYCCREFANSQAL 67

Query: 88  GGHQNAHKKERLKKKKEKM 107
           GGHQNAHKKER   K+ +M
Sbjct: 68  GGHQNAHKKERQLLKRAQM 75

[Close]

BLAST of Carg07979 vs. TAIR 10
Match: AT1G68360.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-08
Identity = 44/117 (37.61%), Postives = 58/117 (49.57%), Query Frame = 0


Query: 20  STSNVEKKVKLFGF------------------ELNPSKNHELGSSSCLNGEGDESVNSST 79
           S+     ++KLFGF                   ++P +      SS  +G G  S     
Sbjct: 7   SSKTTTSRLKLFGFSVDGEEDFSDQSVKTNLSSVSPERGEFPAGSSGRSGGGVRSRGGGG 66

Query: 80  TVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQAT-NASLTY 118
                  E K+ECQYC +EF NSQALGGHQNAHKKER + K  + +LQAT NA+  +
Sbjct: 67  ----GGGERKYECQYCCREFGNSQALGGHQNAHKKERQQLK--RAQLQATRNAAANF 117

[Close]

BLAST of Carg07979 vs. TAIR 10
Match: AT5G57520.1 (zinc finger protein 2 )

HSP 1 Score: 53.5 bits (127), Expect = 2.1e-07
Identity = 33/77 (42.86%), Postives = 44/77 (57.14%), Query Frame = 0


Query: 39  KNHELGSSSCLNGEGDESVNSSTT---VCFERAEPKFECQYCLKEFRNSQALGGHQNAHK 98
           KNH+L     L      S +SS+T    C E+    F C YC ++F +SQALGGHQNAHK
Sbjct: 17  KNHQLNLELVLEPSSMSSSSSSSTNSSSCLEQPR-VFSCNYCQRKFYSSQALGGHQNAHK 76

Query: 99  KERLKKKKEKMELQATN 113
            ER   KK +   +++N
Sbjct: 77  LERTLAKKSRELFRSSN 92

The following BLAST results are available for this feature:

BLAST of Carg07979 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030804.1	3.8e-99	100.00	Zinc finger protein GIS2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6600139.1	2.1e-97	99.47	Zinc finger protein GIS2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022942790.1	7.6e-92	95.24	zinc finger protein 5-like [Cucurbita moschata]	[more]
XP_022985640.1	1.2e-89	94.18	zinc finger protein 5-like [Cucurbita maxima]	[more]
XP_023516645.1	1.5e-84	89.95	zinc finger protein 5-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg07979 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39264	8.3e-17	49.57	Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1	[more]
Q9FG05	4.9e-09	40.22	Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1	[more]
Q39265	7.1e-08	45.57	Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1	[more]
Q9C9H1	1.6e-07	37.61	Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1	[more]
Q39261	3.0e-06	42.86	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]

BLAST of Carg07979 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FWX9	3.7e-92	95.24	zinc finger protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111447719 PE=4 SV...	[more]
A0A6J1JBW1	5.9e-90	94.18	zinc finger protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111483638 PE=4 SV=1	[more]
A0A6J1DBL2	8.3e-44	58.53	zinc finger protein 5-like OS=Momordica charantia OX=3673 GN=LOC111019193 PE=4 S...	[more]
A0A6J1KAH9	9.5e-40	55.26	zinc finger protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111492522 PE=4 SV=1	[more]
A0A6J1GY76	1.5e-37	52.68	zinc finger protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111458285 PE=4 SV...	[more]

BLAST of Carg07979 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10480.1	5.9e-18	49.57	zinc finger protein 5	[more]
AT5G06650.1	3.5e-10	40.22	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G67030.1	5.0e-09	45.57	zinc finger protein 6	[more]
AT1G68360.1	1.1e-08	37.61	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G57520.1	2.1e-07	42.86	zinc finger protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 96..116
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 54..131 e-value: 2.6E-7 score: 32.4
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 72..97 e-value: 1.6E-6 score: 28.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR46353:SF5	ZINC FINGER PROTEIN 5	coord: 12..150
IPR044299	Zinc finger protein GIS3/ZFP5/ZFP6	PANTHER	PTHR46353	ZINC FINGER PROTEIN 5	coord: 12..150
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 74..94
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 72..99 score: 11.260599
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 69..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07979-RA	Carg07979-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010090	trichome morphogenesis