Carg07966 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07966
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	zinc finger CCCH domain-containing protein 6-like
Location	Carg_Chr07: 1946596 .. 1949539 (-)
RNA-Seq Expression	Carg07966
Synteny	Carg07966

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGGGAATTAAATCGAGAGAACCGGTTCTAGGGATTCTCCTTATATCTCTGGCGCTTGATTTTCTTGGCGCCTTATTTTCTTAATCTTCACACATTTTCCTTTCGTCATCTTCTTTGATCTCATTCTATTTTTTTCATCGTCTTCGTTTCGATTACAAGTTTCAGAATCAGATCCGTGCCATCGGATCGATTTTAAGATTGAGGTTTTTTTTTTCTTCAGATAATACGAATCTTCGTTTCTAAGTAGATTACCCTTCCCAACCGATCGATTGTTTCGCTATAAGCTTTAATCTGGAACTTTAGTGTTAGTATTTGAAGCGAATCGATTTGAGTTTAGAGCGTTTTTTATCTAAGATTTTGAGATGAAGCGGCCGAGGAAATCGAAAGGTGTTTCGTGGACTCATGGAGTTGATCTTTGTCAGGTATAATTGCGGTATCTTCTAATCGAAGTATGATGTTATTATAAAATCATGAAAATCTATATACCTTTAATCATAACAAGGCTAGGTTAAGGTTAACGTTCTGTTATTGATGAGTTTGATTACAATAATTTTGGTCGTTTTGAAACGAATTCAAATACTGTGATTTGGAAGGATTAATTTCTTGTTGCTAATGAAATCGTCACGTTGAGAACAAAAAGTACTATTGAATGTCAATCTAGTAATTAAAATTTTACTCTGTGCAACCAAACAGTGGGGCTATAAATCATATTACGGAATTAAATCCACCGCAGTCAGTTTGAACGATCTGAGAGACGTTCTTAAATGTCACGACAATAAATTTATGGAAGCTTTGAAGATATGATGTTAATCTAGAATATGGTTTGATAGAGATTGACGAAATAACAATTCGATTCAAGTGTATAACATGGCTGTGATGTATAACTGAAGCTTCTTGTGACCAAACATTAACAGAATATTGGAAGTATTTGTTCGTAAGCGGTAATCCAAAAATAAATAAACAAAAGCAGAAAAAGAAGACAAAACAACTAGGTAGTTGCGAAGCAGAAATCATTACTCATTTAAAATACAAACTTTGTCACTGTTTCTGCCATCTTTCCCCCAAAGCTGGCATCTGCTCAGATGCCATTGACTGAATGCTTATTTTCTACCTTAATGGACACATTCTGGTTCACATATTGTCATACTGAGAGTCACAGGGTACTTGGGAGGCAATGCCTTGACAGGGTGCTGCAGGATATTGATTGATCATTTCGCCTGTAAAATTACTTTAACATTTTCTTGCATGCAACTGTTAGAGATTGGAACATTATATGATGTTATACTTATAATTGAATGTTGCAGAATGATTAAACAGATGTTGATATTCATTAGTTAAAGGTTTTCCTTACTGATTTTACTTCCAATGAGTTTGTAAGAGTGAATAATTGTGGTTTTAAATAGGTGAAGCTATTCTCATCACAGGACTGTCCTTCAAAAGCTGGCCTGAAATCTTCAGATTATCTCGAAGCAGAAACTCCCAGGATGTTGCATCCTTATACTGCCGAATTTAAGGATTGCCCTCCTGGATTTGAGGTTACTCCTTCGGGAACCCAATTAGCTAATTTGTCCAGCATCTCTTTGATTAAGTGGAGATGCCCTCTTAAGGTGAGCTCTTTCTGATATTTCTGTTCACTTCACTCAATATGAATTCACTTTAGTGGCTATGTGATGTATGTCTGTCCTGCATCATTTTCGGATGTATAACACTTCTTCCAATATGTCTGTACAGTTTGTTATGGATTGCAACTGGTGTGTGACAGCAGGAGAGGAAAGTATAGAGGTAGAATCTCAAAAATTGAGGGAAATGAGATTTCTTGAAGTAGTTTATCCCCGAGTGTCTGCTATTCCGTCAGGGTAATTTCATTCTTTTGTTTCTTGACACAATTTGGAGGATCATTATTTTGTTAACATCAACCTTTCTGATAATGTCTCTCCCTTTCTTTTGCTGTATAGTGCTTCCGTATCTACTGATATTGAGGATGAACTTTATGATGATAGCTTCACTCCTCTTGTTCCTATCATTCCGATCGAGGAAGACGAGTGCGAAGAGTTAGAGCCAGATTCAGCTGCTGTAGGAAACCTCTGTACTAGCACAATGCCTGTTACAGCTTCTAACATTCAGTTGGAACCTGCAATACACGTATGTACGATTGATACGTCTGCAGGTGAAAAACCTACTGAGAAGTTACCTGATGTTGGTATGGATGTAGCTGCTGTTGCCTCTACTGCATTGACGGTATTAATGAAAAGCATGGAGCAGGGAAGCGTGATCAACACCAATTTGCTTATTAAAATTTTCAGTGACCCAAAAATGATCCAGAATTTGGCGAACATTCCCCCAGTATCTGCAGCAGTATCAGGGAGTACACCCCTAGCTACTGCTGCACCAATATCTTTGTCAAAGCCAGTGACCAAACCAGTTTCTCTGTCTTTCCCAAAATCTGATCTGATACCAAAGCTCCCAAATGGAAGCTTATTGAAAGTGCCGAATAGATTCCCATCCAAGGTAGCCACTGTTCTTCCTCAGATGAGTATCATTCCTACATCTGATGTAAATCTAGCCCCAGTCCCCAGCCACATGCCAGTTCCAGATCCCAACAAGGTAAACGTTGCACCGGTAAGTGCAGTAAGAAATGGTCAGCAATGCAAGGATCTTAACTATTGTAAGAACTTGGTGAGACAACATGGAAACCAGAGGAATAATAAGGAACAGAAACCTGGACAGGATGGAAATAATCACCATCATCGTATTCTGAAAAGGGTACATGAGATGAATGCAGAAAACTTTAGACCCAAGATTGTGAAACAATGCAGTTACTTTGATACCCCAAAAGGGTGTAGAAATGGCGTTAATTGCCAATTCAAACATGATGTCACATTTAAGAATCAAAACGCCAAGCACAACTCAACTCTTCTACGGGTGACGGGATCGCCCAGGCGG

mRNA sequence

AAAGGGAATTAAATCGAGAGAACCGGTTCTAGGGATTCTCCTTATATCTCTGGCGCTTGATTTTCTTGGCGCCTTATTTTCTTAATCTTCACACATTTTCCTTTCGTCATCTTCTTTGATCTCATTCTATTTTTTTCATCGTCTTCGTTTCGATTACAAGTTTCAGAATCAGATCCGTGCCATCGGATCGATTTTAAGATTGAGGTTTTTTTTTTCTTCAGATAATACGAATCTTCGTTTCTAAGTAGATTACCCTTCCCAACCGATCGATTGTTTCGCTATAAGCTTTAATCTGGAACTTTAGTGTTAGTATTTGAAGCGAATCGATTTGAGTTTAGAGCGTTTTTTATCTAAGATTTTGAGATGAAGCGGCCGAGGAAATCGAAAGGTGTTTCGTGGACTCATGGAGTTGATCTTTGTCAGGTGAAGCTATTCTCATCACAGGACTGTCCTTCAAAAGCTGGCCTGAAATCTTCAGATTATCTCGAAGCAGAAACTCCCAGGATGTTGCATCCTTATACTGCCGAATTTAAGGATTGCCCTCCTGGATTTGAGGTTACTCCTTCGGGAACCCAATTAGCTAATTTGTCCAGCATCTCTTTGATTAAGTGGAGATGCCCTCTTAAGTTTGTTATGGATTGCAACTGGTGTGTGACAGCAGGAGAGGAAAGTATAGAGGTAGAATCTCAAAAATTGAGGGAAATGAGATTTCTTGAAGTAGTTTATCCCCGAGTGTCTGCTATTCCGTCAGGTGCTTCCGTATCTACTGATATTGAGGATGAACTTTATGATGATAGCTTCACTCCTCTTGTTCCTATCATTCCGATCGAGGAAGACGAGTGCGAAGAGTTAGAGCCAGATTCAGCTGCTGTAGGAAACCTCTGTACTAGCACAATGCCTGTTACAGCTTCTAACATTCAGTTGGAACCTGCAATACACGTATGTACGATTGATACGTCTGCAGGTGAAAAACCTACTGAGAAGTTACCTGATGTTGGTATGGATGTAGCTGCTGTTGCCTCTACTGCATTGACGGTATTAATGAAAAGCATGGAGCAGGGAAGCGTGATCAACACCAATTTGCTTATTAAAATTTTCAGTGACCCAAAAATGATCCAGAATTTGGCGAACATTCCCCCAGTATCTGCAGCAGTATCAGGGAGTACACCCCTAGCTACTGCTGCACCAATATCTTTGTCAAAGCCAGTGACCAAACCAGTTTCTCTGTCTTTCCCAAAATCTGATCTGATACCAAAGCTCCCAAATGGAAGCTTATTGAAAGTGCCGAATAGATTCCCATCCAAGGTAGCCACTGTTCTTCCTCAGATGAGTATCATTCCTACATCTGATGTAAATCTAGCCCCAGTCCCCAGCCACATGCCAGTTCCAGATCCCAACAAGGTAAACGTTGCACCGGTAAGTGCAGTAAGAAATGGTCAGCAATGCAAGGATCTTAACTATTGTAAGAACTTGGTGAGACAACATGGAAACCAGAGGAATAATAAGGAACAGAAACCTGGACAGGATGGAAATAATCACCATCATCGTATTCTGAAAAGGGTACATGAGATGAATGCAGAAAACTTTAGACCCAAGATTGTGAAACAATGCAGTTACTTTGATACCCCAAAAGGGTGTAGAAATGGCGTTAATTGCCAATTCAAACATGATGTCACATTTAAGAATCAAAACGCCAAGCACAACTCAACTCTTCTACGGGTGACGGGATCGCCCAGGCGG

Coding sequence (CDS)

ATGAAGCGGCCGAGGAAATCGAAAGGTGTTTCGTGGACTCATGGAGTTGATCTTTGTCAGGTGAAGCTATTCTCATCACAGGACTGTCCTTCAAAAGCTGGCCTGAAATCTTCAGATTATCTCGAAGCAGAAACTCCCAGGATGTTGCATCCTTATACTGCCGAATTTAAGGATTGCCCTCCTGGATTTGAGGTTACTCCTTCGGGAACCCAATTAGCTAATTTGTCCAGCATCTCTTTGATTAAGTGGAGATGCCCTCTTAAGTTTGTTATGGATTGCAACTGGTGTGTGACAGCAGGAGAGGAAAGTATAGAGGTAGAATCTCAAAAATTGAGGGAAATGAGATTTCTTGAAGTAGTTTATCCCCGAGTGTCTGCTATTCCGTCAGGTGCTTCCGTATCTACTGATATTGAGGATGAACTTTATGATGATAGCTTCACTCCTCTTGTTCCTATCATTCCGATCGAGGAAGACGAGTGCGAAGAGTTAGAGCCAGATTCAGCTGCTGTAGGAAACCTCTGTACTAGCACAATGCCTGTTACAGCTTCTAACATTCAGTTGGAACCTGCAATACACGTATGTACGATTGATACGTCTGCAGGTGAAAAACCTACTGAGAAGTTACCTGATGTTGGTATGGATGTAGCTGCTGTTGCCTCTACTGCATTGACGGTATTAATGAAAAGCATGGAGCAGGGAAGCGTGATCAACACCAATTTGCTTATTAAAATTTTCAGTGACCCAAAAATGATCCAGAATTTGGCGAACATTCCCCCAGTATCTGCAGCAGTATCAGGGAGTACACCCCTAGCTACTGCTGCACCAATATCTTTGTCAAAGCCAGTGACCAAACCAGTTTCTCTGTCTTTCCCAAAATCTGATCTGATACCAAAGCTCCCAAATGGAAGCTTATTGAAAGTGCCGAATAGATTCCCATCCAAGGTAGCCACTGTTCTTCCTCAGATGAGTATCATTCCTACATCTGATGTAAATCTAGCCCCAGTCCCCAGCCACATGCCAGTTCCAGATCCCAACAAGGTAAACGTTGCACCGGTAAGTGCAGTAAGAAATGGTCAGCAATGCAAGGATCTTAACTATTGTAAGAACTTGGTGAGACAACATGGAAACCAGAGGAATAATAAGGAACAGAAACCTGGACAGGATGGAAATAATCACCATCATCGTATTCTGAAAAGGGTACATGAGATGAATGCAGAAAACTTTAGACCCAAGATTGTGAAACAATGCAGTTACTTTGATACCCCAAAAGGGTGTAGAAATGGCGTTAATTGCCAATTCAAACATGATGTCACATTTAAGAATCAAAACGCCAAGCACAACTCAACTCTTCTACGGGTGACGGGATCGCCCAGGCGG

Protein sequence

MKRPRKSKGVSWTHGVDLCQVKLFSSQDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCPPGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVVYPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTSTMPVTASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNLLIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPVSLSFPKSDLIPKLPNGSLLKVPNRFPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDPNKVNVAPVSAVRNGQQCKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRVHEMNAENFRPKIVKQCSYFDTPKGCRNGVNCQFKHDVTFKNQNAKHNSTLLRVTGSPRR

Homology

[Close]

BLAST of Carg07966 vs. NCBI nr
Match: KAG7026750.1 (Zinc finger CCCH domain-containing protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 915.6 bits (2365), Expect = 1.7e-262
Identity = 459/459 (100.00%), Postives = 459/459 (100.00%), Query Frame = 0


Query: 1   MKRPRKSKGVSWTHGVDLCQVKLFSSQDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP 60
           MKRPRKSKGVSWTHGVDLCQVKLFSSQDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP
Sbjct: 1   MKRPRKSKGVSWTHGVDLCQVKLFSSQDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP 60

Query: 61  PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV 120
           PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV
Sbjct: 61  PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV 120

Query: 121 YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTSTMPV 180
           YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTSTMPV
Sbjct: 121 YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTSTMPV 180

Query: 181 TASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNL 240
           TASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNL
Sbjct: 181 TASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNL 240

Query: 241 LIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPVSLSFPKSDLIPKLP 300
           LIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPVSLSFPKSDLIPKLP
Sbjct: 241 LIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPVSLSFPKSDLIPKLP 300

Query: 301 NGSLLKVPNRFPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDPNKVNVAPVSAVRNGQQ 360
           NGSLLKVPNRFPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDPNKVNVAPVSAVRNGQQ
Sbjct: 301 NGSLLKVPNRFPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDPNKVNVAPVSAVRNGQQ 360

Query: 361 CKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRVHEMNAENFRPKIVKQCSYFD 420
           CKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRVHEMNAENFRPKIVKQCSYFD
Sbjct: 361 CKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRVHEMNAENFRPKIVKQCSYFD 420

Query: 421 TPKGCRNGVNCQFKHDVTFKNQNAKHNSTLLRVTGSPRR 460
           TPKGCRNGVNCQFKHDVTFKNQNAKHNSTLLRVTGSPRR
Sbjct: 421 TPKGCRNGVNCQFKHDVTFKNQNAKHNSTLLRVTGSPRR 459

[Close]

BLAST of Carg07966 vs. NCBI nr
Match: KAG6594785.1 (Zinc finger CCCH domain-containing protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 870.5 bits (2248), Expect = 6.2e-249
Identity = 440/455 (96.70%), Postives = 440/455 (96.70%), Query Frame = 0


Query: 1   MKRPRKSKGVSWTHGVDLCQVKLFSSQDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP 60
           MKRPRKSKGVSWTHGVDLC       QDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP
Sbjct: 1   MKRPRKSKGVSWTHGVDLC-------QDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP 60

Query: 61  PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV 120
           PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV
Sbjct: 61  PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV 120

Query: 121 YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTSTMPV 180
           YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTSTMPV
Sbjct: 121 YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTSTMPV 180

Query: 181 TASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNL 240
           TASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNL
Sbjct: 181 TASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNL 240

Query: 241 LIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPVSLSFPKSDLIPKLP 300
           LIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPVSLSFPKSDLIPKLP
Sbjct: 241 LIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPVSLSFPKSDLIPKLP 300

Query: 301 NGSLLKVPNRFPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDPNKVNVAPVSAVRNGQQ 360
           NGSLLKVPNRFPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDPNKVNVAPVSAVRNGQQ
Sbjct: 301 NGSLLKVPNRFPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDPNKVNVAPVSAVRNGQQ 360

Query: 361 CKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRVHEMNAENFRPKIVKQCSYFD 420
           CKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRVHEMNAENFRPKIVKQCSYFD
Sbjct: 361 CKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRVHEMNAENFRPKIVKQCSYFD 420

Query: 421 TPKGCRNGVNCQFKHDVTFKNQNAKHNSTLLRVTG 456
           TPKGCRNGVNCQFKHDVTFKNQN K       VTG
Sbjct: 421 TPKGCRNGVNCQFKHDVTFKNQNTKRMKVCGEVTG 448

[Close]

BLAST of Carg07966 vs. NCBI nr
Match: XP_022962755.1 (zinc finger CCCH domain-containing protein 6-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 864.0 bits (2231), Expect = 5.8e-247
Identity = 442/475 (93.05%), Postives = 445/475 (93.68%), Query Frame = 0


Query: 1   MKRPRKSKGVSWTHGVDLCQVKLFSSQDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP 60
           MKRPRKSKGVSWTHGVDLCQVKLFSSQDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP
Sbjct: 1   MKRPRKSKGVSWTHGVDLCQVKLFSSQDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP 60

Query: 61  PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV 120
           PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV
Sbjct: 61  PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV 120

Query: 121 YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTSTMPV 180
           YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTS+MPV
Sbjct: 121 YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTSSMPV 180

Query: 181 TASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNL 240
           TASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNL
Sbjct: 181 TASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNL 240

Query: 241 LIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPVSLSFPKSDLIPKLP 300
           LIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPV  SFPKSDLIPKLP
Sbjct: 241 LIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPV--SFPKSDLIPKLP 300

Query: 301 NGSLLKVPNRFPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDPNKV------------- 360
           NGSLLKVPN FPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDP+KV             
Sbjct: 301 NGSLLKVPNGFPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDPDKVKIMIPNFKNYSKI 360

Query: 361 -------NVAPVSAVRNGQQCKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRV 420
                  NVAPVS+VRNGQQCKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRV
Sbjct: 361 GAIPAQANVAPVSSVRNGQQCKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRV 420

Query: 421 HEMNAENFRPKIVKQCSYFDTPKGCRNGVNCQFKHDVTFKNQNAKHNSTLLRVTG 456
           HEMNAENFRPKIVKQCSYFDTPKGCRNGVNCQFKHDVTFKNQNAK       VTG
Sbjct: 421 HEMNAENFRPKIVKQCSYFDTPKGCRNGVNCQFKHDVTFKNQNAKRMKVCGEVTG 473

[Close]

BLAST of Carg07966 vs. NCBI nr
Match: XP_022962756.1 (zinc finger CCCH domain-containing protein 6-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 844.7 bits (2181), Expect = 3.7e-241
Identity = 435/475 (91.58%), Postives = 438/475 (92.21%), Query Frame = 0


Query: 1   MKRPRKSKGVSWTHGVDLCQVKLFSSQDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP 60
           MKRPRKSKGVSWTHGVDLC       QDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP
Sbjct: 1   MKRPRKSKGVSWTHGVDLC-------QDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP 60

Query: 61  PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV 120
           PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV
Sbjct: 61  PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV 120

Query: 121 YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTSTMPV 180
           YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTS+MPV
Sbjct: 121 YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTSSMPV 180

Query: 181 TASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNL 240
           TASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNL
Sbjct: 181 TASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNL 240

Query: 241 LIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPVSLSFPKSDLIPKLP 300
           LIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPV  SFPKSDLIPKLP
Sbjct: 241 LIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPV--SFPKSDLIPKLP 300

Query: 301 NGSLLKVPNRFPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDPNKV------------- 360
           NGSLLKVPN FPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDP+KV             
Sbjct: 301 NGSLLKVPNGFPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDPDKVKIMIPNFKNYSKI 360

Query: 361 -------NVAPVSAVRNGQQCKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRV 420
                  NVAPVS+VRNGQQCKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRV
Sbjct: 361 GAIPAQANVAPVSSVRNGQQCKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRV 420

Query: 421 HEMNAENFRPKIVKQCSYFDTPKGCRNGVNCQFKHDVTFKNQNAKHNSTLLRVTG 456
           HEMNAENFRPKIVKQCSYFDTPKGCRNGVNCQFKHDVTFKNQNAK       VTG
Sbjct: 421 HEMNAENFRPKIVKQCSYFDTPKGCRNGVNCQFKHDVTFKNQNAKRMKVCGEVTG 466

[Close]

BLAST of Carg07966 vs. NCBI nr
Match: XP_023518409.1 (zinc finger CCCH domain-containing protein 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 840.9 bits (2171), Expect = 5.3e-240
Identity = 429/475 (90.32%), Postives = 436/475 (91.79%), Query Frame = 0


Query: 1   MKRPRKSKGVSWTHGVDLCQVKLFSSQDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP 60
           MKR RKS+GVSWTHGVDLCQVKLFSS+DCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP
Sbjct: 1   MKRQRKSRGVSWTHGVDLCQVKLFSSKDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP 60

Query: 61  PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV 120
           PGFEVTPS TQ+ANLSSISLIKWRCPLKFVMDCNWCVTAGE SIEVESQKLREMRFLEVV
Sbjct: 61  PGFEVTPSRTQVANLSSISLIKWRCPLKFVMDCNWCVTAGEGSIEVESQKLREMRFLEVV 120

Query: 121 YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTSTMPV 180
           YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECE+LEPDSAAVGNLCTS+MP 
Sbjct: 121 YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEDLEPDSAAVGNLCTSSMPD 180

Query: 181 TASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNL 240
           TASNIQLEPAIHVCTIDTSAGEKP EKLPDVGMDVAAVASTALTVLMKSMEQGS+INTNL
Sbjct: 181 TASNIQLEPAIHVCTIDTSAGEKPIEKLPDVGMDVAAVASTALTVLMKSMEQGSMINTNL 240

Query: 241 LIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPVSLSFPKSDLIPKLP 300
           LIKIFSDPKMIQNL NIPPVSAAVSGSTPLATAAPISLSKPVTKPVSLSFPKSDLIPKLP
Sbjct: 241 LIKIFSDPKMIQNLVNIPPVSAAVSGSTPLATAAPISLSKPVTKPVSLSFPKSDLIPKLP 300

Query: 301 NGSLLKVPNRFPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDPNKV------------- 360
           NGSLLKVPN  PSKVATVLPQMS IPTSDVNLAPVPSHMPVPDPN V             
Sbjct: 301 NGSLLKVPNGLPSKVATVLPQMSTIPTSDVNLAPVPSHMPVPDPNMVKIMVPNSKNYSKI 360

Query: 361 -------NVAPVSAVRNGQQCKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRV 420
                  NVAPVS+VRNGQQCKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRV
Sbjct: 361 GAIPAQANVAPVSSVRNGQQCKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRV 420

Query: 421 HEMNAENFRPKIVKQCSYFDTPKGCRNGVNCQFKHDVTFKNQNAKHNSTLLRVTG 456
           HEMNAEN RPKI KQCSYFDTPKGCRNGVNCQFKHDVTFKNQNAK       VTG
Sbjct: 421 HEMNAENLRPKIGKQCSYFDTPKGCRNGVNCQFKHDVTFKNQNAKRMKVCGEVTG 475

[Close]

BLAST of Carg07966 vs. ExPASy Swiss-Prot
Match: Q56XU4 (Zinc finger CCCH domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=At1g19860 PE=1 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.5e-48
Identity = 149/443 (33.63%), Postives = 216/443 (48.76%), Query Frame = 0


Query: 8   KGVSWTHGVDLCQVKLFSSQDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCPPGFEVTP 67
           K VSW     LCQV+LF S+D PS+ G +S D+L+A++P   HP      + PPGF    
Sbjct: 6   KRVSWPPDFKLCQVRLFISEDSPSQVGSESQDHLQAKSPLASHP---SDDNLPPGFGGPF 65

Query: 68  SGTQ-LANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVVYPRVSA 127
           S  +    LS I LIKW+C ++ ++D  W V AG+ES EVE+Q  RE+R LE  YP  S+
Sbjct: 66  SANESQIKLSDIPLIKWKCSVQILLDREWKVVAGDESKEVEAQNERELRVLEAFYPGASS 125

Query: 128 IPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTSTMPVTAS-NI 187
           IP   SV  D+ED  +DD  T ++PI+P+E+D   ++  DSA       S  P  +  ++
Sbjct: 126 IPPNPSVPADVEDSHHDDQQTIVIPILPVEDD---DIAMDSA-------SDFPTQSGVDV 185

Query: 188 QLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNLLIKIF 247
             EP+I      T      +  LP  G D+ A    AL+ +  S EQGS+I+ +LLIKI 
Sbjct: 186 GTEPSI------TDENTSTSSTLP-AGPDIMA----ALSAISNSKEQGSMIDQDLLIKIL 245

Query: 248 SDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPVSLSFPKSDLIPKLPNGSLL 307
           S+PK+++NL      +   +GS    T++  S S      V  + P S       NG   
Sbjct: 246 SNPKLVENLV----ANRGSAGSVSSNTSSLYSSSTHEANGVVTTAPISS------NGQFY 305

Query: 308 KVPNRFPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDPNKVNVAPVSAVRNGQQCKDLN 367
             P        T +P M+  P           H P   PN                +D +
Sbjct: 306 AQP------PITHIPPMAYTP-----------HAPQDQPN----------YGAPPARDAS 365

Query: 368 YCKNLVRQHGNQRNNKEQKPGQ----------DGNNHHHRILKRVHEMNAENFRPKIVKQ 427
           Y KNL++QHG  R  +E  P Q           G  +   +    +     + +PKI+K 
Sbjct: 366 YYKNLIQQHGGDR--QETPPVQHLGYRYNLQPGGGPNPEMVNSSNNNQRPRDSKPKIMKA 385

Query: 428 CSYFDTPKGCRNGVNCQFKHDVT 439
           C YF++ +GCR+G NC ++HD T
Sbjct: 426 CMYFNSARGCRHGANCMYQHDAT 385

[Close]

BLAST of Carg07966 vs. ExPASy Swiss-Prot
Match: Q7XM16 (Zinc finger CCCH domain-containing protein 30 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0663200 PE=2 SV=3)

HSP 1 Score: 174.1 bits (440), Expect = 3.7e-42
Identity = 160/465 (34.41%), Postives = 224/465 (48.17%), Query Frame = 0


Query: 1   MKRPRKSKGVSWTHGVDLCQVKLFSSQDCPSKAGLKSSDYLEAETPRMLHPYTAEFKD-C 60
           M   R+S+ VSW  G +LC+V+LF S+D PS+AGL+  D L+A+   +LH       D  
Sbjct: 1   MMGSRRSRRVSWASGGNLCKVRLFLSEDSPSQAGLRPQDNLQAKGSWLLHAAGPSSDDSL 60

Query: 61  PPGFEVTPSGTQL-ANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLE 120
           PPGFE  P    L  ++S I LI+W+CP   V++ +W + AGEES E+E Q  R    LE
Sbjct: 61  PPGFESLPPSNDLKIDMSQIPLIRWKCPPHIVLEQDWHIVAGEESREIEIQNERINGALE 120

Query: 121 VVYPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDEC-EELEP---DSAAVGNLC 180
            +YPR S IP    +S D++D  YDDS T LVP+IP+E+D+  ++LE    D  +  N+ 
Sbjct: 121 AIYPRPSNIPPNPFLSLDVKDAHYDDSKTLLVPLIPLEDDDASDQLEGPTLDLPSHYNIT 180

Query: 181 -TSTMPVTASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSM--E 240
             S  PV+A   Q  P    C    S+G    E    V   V A+  T  +    SM  +
Sbjct: 181 GVSNTPVSAE--QQPP----CGGAISSG-FTIEPQAAVSATVTAIMQTIQSNQNGSMADQ 240

Query: 241 QGSVINTNLLIKIFSDPKMIQNL-ANIPPVSAAVSGSTPLATAAPISLSKPVTKPVSLSF 300
            GS I+  LL KI SDP  +Q L     PV    S S+  +  AP+    P     S   
Sbjct: 241 NGSTIDQELLFKILSDPSQLQRLMKECGPVRHEQSASS--SVVAPLVSIPPPQITASSPA 300

Query: 301 PKSDLI-------PKLPNGSLLKVPNRFPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPD 360
           P SD +       P LP      + NR PS + +V       P S        S +P   
Sbjct: 301 PFSDHVGTFHGMNPTLPPPP--PMMNRPPSTIPSVAMNH---PPSSSPAMNFGSALPSSS 360

Query: 361 PNKVNVAPVSAVRNGQQCKDLNYCKNLVRQHGNQRNNK--EQKPGQDG--------NNHH 420
           P+ VN   V         + + Y K L+ QHG +R  +  EQ   Q G         N  
Sbjct: 361 PS-VNFGSVPG-------RGVGYYKTLIHQHGGERLEQPFEQHGMQFGMYRQPGPPQNGG 420

Query: 421 HRILKRVHEMNAENFRPKIVKQCSYFDTPKGCRNGVNCQFKHDVT 439
              +     M + + + + +K C+YF++PKGCRNG +C F HD +
Sbjct: 421 IDAMNGAAAMVSRDGKVRPMKPCAYFNSPKGCRNGASCTFLHDAS 443

[Close]

BLAST of Carg07966 vs. ExPASy Swiss-Prot
Match: Q94C33 (Zinc finger CCCH domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=At3g51180 PE=1 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 5.1e-36
Identity = 161/525 (30.67%), Postives = 227/525 (43.24%), Query Frame = 0


Query: 1   MKRPRKSKGVSWTHGVDLCQVKLFSSQDCPSKAGLKSSDYLEAETPRMLHPYTA---EFK 60
           MKR +K + VSW  G  LCQVK+F ++D P+           A  P+  H Y +      
Sbjct: 4   MKRSKKPR-VSWPPGPKLCQVKVFRTEDSPANV---------ASQPQR-HSYPSRKPRGP 63

Query: 61  DCPPGFEVTPSGTQLANLSSISLIKW-RCPLKFVMDCNWCVTAGEESIEVESQKLREMRF 120
           D PPGFE      +  N+S+I  IKW R P KF ++  W V  G  S E +++ LR  + 
Sbjct: 64  DLPPGFEGNHYAVK-PNVSNIPRIKWKRPPPKFSVNDTWLVGCGGGSSEWQNENLRISKV 123

Query: 121 LEVVYPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTS 180
           LE +YP  SAIPS  SVS  +E E +DDS TP + + PIE    +E E  S    N    
Sbjct: 124 LEAIYPHRSAIPSRPSVSPAVEAECFDDSKTPAIRLTPIE----DESESSSEESSNSKVE 183

Query: 181 TMPVTASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVI 240
           +        QLE      T    + ++    L  +  D++  AS ALT LMK+ EQGS++
Sbjct: 184 SGVTANKQGQLE------TKPLCSTQEQVSGLTGLAPDLSLAASAALTALMKTKEQGSLV 243

Query: 241 NTNLLIKIFSDPKMIQNL-----------ANIPPVSAAVSGSTPL------ATAAPISLS 300
           +T LLIK  SDPK+I+NL            N P V+   S + P+       TA+P++  
Sbjct: 244 DTELLIKFLSDPKLIKNLITDTSGKSSETKNQPIVTNINSATRPVPQPVSAVTASPMARK 303

Query: 301 -KPVTKP------VSLSF--PKSDLIPKLP-NGSL------------LKVPNRFPSKVAT 360
            +PV  P      VS SF  P+  + P  P NGS+            + +P  F   +A 
Sbjct: 304 PQPVIIPQEHSVAVSRSFTNPERRVSPPKPVNGSISPPKPITGKPSSIPMPVHFHVGIAK 363

Query: 361 VLPQMSIIPTSD------------------VNLAPVPSHMPVP----------------- 420
             PQ +  P+S                   V + P P H P                   
Sbjct: 364 EQPQPARFPSSSLPMNLNFHRPPNVFSEPKVIVNPQPQHQPYSAFRTSEMNYVQSSIGLG 423

Query: 421 -------DPNKVNVAPVSAVRNG----QQCKDLNYCKNLVRQHGNQRNNKEQKPGQDGNN 437
                  +   +N +   A+ +     Q  K L+Y KNL+R+HG   +   Q   Q G  
Sbjct: 424 RGPQTGFNSYPMNFSRADAIGSAKPVVQPMKGLDYFKNLIREHGTDNHETNQYHSQTG-- 483

[Close]

BLAST of Carg07966 vs. ExPASy Swiss-Prot
Match: Q9FH61 (Zinc finger CCCH domain-containing protein 68 OS=Arabidopsis thaliana OX=3702 GN=At5g66270 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 8.4e-31
Identity = 142/503 (28.23%), Postives = 212/503 (42.15%), Query Frame = 0


Query: 1   MKRPRKSKGVSWTHGVDLCQVKLFSSQDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP 60
           MK+ +K + VSW     LCQVKLF S DCP K                         + P
Sbjct: 2   MKKTKKGR-VSWASDSMLCQVKLFLSDDCPVKVA----------------------SNLP 61

Query: 61  PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV 120
           PGFE T   T+   +S I  IKW+ P  FV+D    V +G +SIE  S+ LR  + LE  
Sbjct: 62  PGFEATDYATKRI-ISHIPRIKWKRPPLFVLDDALLVGSGGKSIETRSENLRISKVLEAF 121

Query: 121 YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTSTMPV 180
           YP  S IPS  S++  +E+E YDD  TP +P+  +E+      E D+AA           
Sbjct: 122 YPHRSVIPSRPSLTLAVEEEHYDDGKTPNIPLTHVED------ERDAAA----------- 181

Query: 181 TASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNL 240
                           ++S   +    +  +G +++ +AS AL+ L K  EQGS ++ +L
Sbjct: 182 ----------------ESSHSFEAPAAVSGLGPELSLLASAALSALTK--EQGSQVDPDL 241

Query: 241 LIKIFSDPKMIQNL------------------------------------ANIPPVSAAV 300
           L+K+ SDPK+++NL                                     N PP+   V
Sbjct: 242 LVKLLSDPKIVENLINGMKGKPLETANNSLNTDITEPRLAPQHVTSTTMDRNPPPMPGNV 301

Query: 301 SGSTPLATAAPISLSKPVTKP---------VSLSFPK-SDLIPKLPNGSLLKVPNRF--- 360
           +      +    +   P+ KP         ++L+  K + ++   P  S +KV + +   
Sbjct: 302 APHNVPVSVQSSATDPPLPKPNQPMSSALSMNLTLQKPTPVVHNYPLSSGIKVEDSYTAA 361

Query: 361 PSKVAT-----VLPQMS--IIPTSDVNLAPVP-SHMPVPDPNKVNVAPVSAVRNG----- 420
           P K +T     V  Q +  + P S  N+  VP S     DP          +RNG     
Sbjct: 362 PLKPSTGDDVVVSEQKTQLLFPCSSWNMNKVPESARTETDPQ---------IRNGNTNRD 421

Query: 421 -----QQCKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRVHEMNAENFRPKIV 437
                +  KDL+Y KNL+R+HG  +    +     G   H +I+K            +I 
Sbjct: 422 DQVSAKPVKDLDYFKNLIREHGAVKPATTETNNYKGRVDHKKIVK-----------VRIQ 425

[Close]

BLAST of Carg07966 vs. ExPASy TrEMBL
Match: A0A6J1HFZ5 (zinc finger CCCH domain-containing protein 6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463152 PE=4 SV=1)

HSP 1 Score: 864.0 bits (2231), Expect = 2.8e-247
Identity = 442/475 (93.05%), Postives = 445/475 (93.68%), Query Frame = 0


Query: 1   MKRPRKSKGVSWTHGVDLCQVKLFSSQDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP 60
           MKRPRKSKGVSWTHGVDLCQVKLFSSQDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP
Sbjct: 1   MKRPRKSKGVSWTHGVDLCQVKLFSSQDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP 60

Query: 61  PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV 120
           PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV
Sbjct: 61  PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV 120

Query: 121 YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTSTMPV 180
           YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTS+MPV
Sbjct: 121 YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTSSMPV 180

Query: 181 TASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNL 240
           TASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNL
Sbjct: 181 TASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNL 240

Query: 241 LIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPVSLSFPKSDLIPKLP 300
           LIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPV  SFPKSDLIPKLP
Sbjct: 241 LIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPV--SFPKSDLIPKLP 300

Query: 301 NGSLLKVPNRFPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDPNKV------------- 360
           NGSLLKVPN FPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDP+KV             
Sbjct: 301 NGSLLKVPNGFPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDPDKVKIMIPNFKNYSKI 360

Query: 361 -------NVAPVSAVRNGQQCKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRV 420
                  NVAPVS+VRNGQQCKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRV
Sbjct: 361 GAIPAQANVAPVSSVRNGQQCKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRV 420

Query: 421 HEMNAENFRPKIVKQCSYFDTPKGCRNGVNCQFKHDVTFKNQNAKHNSTLLRVTG 456
           HEMNAENFRPKIVKQCSYFDTPKGCRNGVNCQFKHDVTFKNQNAK       VTG
Sbjct: 421 HEMNAENFRPKIVKQCSYFDTPKGCRNGVNCQFKHDVTFKNQNAKRMKVCGEVTG 473

[Close]

BLAST of Carg07966 vs. ExPASy TrEMBL
Match: A0A6J1HE37 (zinc finger CCCH domain-containing protein 6-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463152 PE=4 SV=1)

HSP 1 Score: 844.7 bits (2181), Expect = 1.8e-241
Identity = 435/475 (91.58%), Postives = 438/475 (92.21%), Query Frame = 0


Query: 1   MKRPRKSKGVSWTHGVDLCQVKLFSSQDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP 60
           MKRPRKSKGVSWTHGVDLC       QDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP
Sbjct: 1   MKRPRKSKGVSWTHGVDLC-------QDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP 60

Query: 61  PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV 120
           PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV
Sbjct: 61  PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV 120

Query: 121 YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTSTMPV 180
           YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTS+MPV
Sbjct: 121 YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTSSMPV 180

Query: 181 TASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNL 240
           TASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNL
Sbjct: 181 TASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNL 240

Query: 241 LIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPVSLSFPKSDLIPKLP 300
           LIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPV  SFPKSDLIPKLP
Sbjct: 241 LIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPV--SFPKSDLIPKLP 300

Query: 301 NGSLLKVPNRFPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDPNKV------------- 360
           NGSLLKVPN FPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDP+KV             
Sbjct: 301 NGSLLKVPNGFPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDPDKVKIMIPNFKNYSKI 360

Query: 361 -------NVAPVSAVRNGQQCKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRV 420
                  NVAPVS+VRNGQQCKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRV
Sbjct: 361 GAIPAQANVAPVSSVRNGQQCKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRV 420

Query: 421 HEMNAENFRPKIVKQCSYFDTPKGCRNGVNCQFKHDVTFKNQNAKHNSTLLRVTG 456
           HEMNAENFRPKIVKQCSYFDTPKGCRNGVNCQFKHDVTFKNQNAK       VTG
Sbjct: 421 HEMNAENFRPKIVKQCSYFDTPKGCRNGVNCQFKHDVTFKNQNAKRMKVCGEVTG 466

[Close]

BLAST of Carg07966 vs. ExPASy TrEMBL
Match: A0A6J1KXW5 (zinc finger CCCH domain-containing protein 6-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497340 PE=4 SV=1)

HSP 1 Score: 817.8 bits (2111), Expect = 2.3e-233
Identity = 420/475 (88.42%), Postives = 432/475 (90.95%), Query Frame = 0


Query: 1   MKRPRKSKGVSWTHGVDLCQVKLFSSQDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP 60
           MKR RKSKGVSWTHGVDLC+VKLFSS+DCPSKAGLKSSDYLEAETPRMLHPYTAEF DCP
Sbjct: 1   MKRQRKSKGVSWTHGVDLCRVKLFSSKDCPSKAGLKSSDYLEAETPRMLHPYTAEFNDCP 60

Query: 61  PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV 120
           PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV
Sbjct: 61  PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV 120

Query: 121 YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTSTMPV 180
            PRVSAIPSGASVSTDIEDE+YDDSFTPLVPIIPIEEDECE+LEPDSAAVGNLCT++MPV
Sbjct: 121 NPRVSAIPSGASVSTDIEDEVYDDSFTPLVPIIPIEEDECEDLEPDSAAVGNLCTTSMPV 180

Query: 181 TASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNL 240
           TASNIQLEPAI V TIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGS+INTNL
Sbjct: 181 TASNIQLEPAILVRTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSMINTNL 240

Query: 241 LIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPVSLSFPKSDLIPKLP 300
           LIKIFSDPKMIQNLANIPPVS AVSGSTPLATAAPISLSKPV KP SLSFPKSDLIPKLP
Sbjct: 241 LIKIFSDPKMIQNLANIPPVSEAVSGSTPLATAAPISLSKPVIKP-SLSFPKSDLIPKLP 300

Query: 301 NGSLLKVPNRFPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDPNKV------------- 360
           NGSL +V N FPSKVAT LPQ+SIIPTSDVNLAPVPSHMPVPDPNKV             
Sbjct: 301 NGSLFRVSNGFPSKVATALPQISIIPTSDVNLAPVPSHMPVPDPNKVKIMVRNSKNCSKI 360

Query: 361 -------NVAPVSAVRNGQQCKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRV 420
                  N+APV +VRNGQQCKDLNYCKNLVRQHGNQRN+KEQKPGQDGNNHHHRILKRV
Sbjct: 361 GAIPAQANIAPVCSVRNGQQCKDLNYCKNLVRQHGNQRNSKEQKPGQDGNNHHHRILKRV 420

Query: 421 HEMNAENFRPKIVKQCSYFDTPKGCRNGVNCQFKHDVTFKNQNAKHNSTLLRVTG 456
           HEMNAEN RPKI KQCSYFDTPKGCRNGVNCQFKHD TFKNQNAK       VTG
Sbjct: 421 HEMNAENLRPKIGKQCSYFDTPKGCRNGVNCQFKHDDTFKNQNAKRMKVCGEVTG 474

[Close]

BLAST of Carg07966 vs. ExPASy TrEMBL
Match: A0A6J1KUL1 (zinc finger CCCH domain-containing protein 6-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497340 PE=4 SV=1)

HSP 1 Score: 800.0 bits (2065), Expect = 5.0e-228
Identity = 414/475 (87.16%), Postives = 425/475 (89.47%), Query Frame = 0


Query: 1   MKRPRKSKGVSWTHGVDLCQVKLFSSQDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP 60
           MKR RKSKGVSWTHGVDLC       +DCPSKAGLKSSDYLEAETPRMLHPYTAEF DCP
Sbjct: 1   MKRQRKSKGVSWTHGVDLC-------RDCPSKAGLKSSDYLEAETPRMLHPYTAEFNDCP 60

Query: 61  PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV 120
           PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV
Sbjct: 61  PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV 120

Query: 121 YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTSTMPV 180
            PRVSAIPSGASVSTDIEDE+YDDSFTPLVPIIPIEEDECE+LEPDSAAVGNLCT++MPV
Sbjct: 121 NPRVSAIPSGASVSTDIEDEVYDDSFTPLVPIIPIEEDECEDLEPDSAAVGNLCTTSMPV 180

Query: 181 TASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNL 240
           TASNIQLEPAI V TIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGS+INTNL
Sbjct: 181 TASNIQLEPAILVRTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSMINTNL 240

Query: 241 LIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPVSLSFPKSDLIPKLP 300
           LIKIFSDPKMIQNLANIPPVS AVSGSTPLATAAPISLSKPV KP SLSFPKSDLIPKLP
Sbjct: 241 LIKIFSDPKMIQNLANIPPVSEAVSGSTPLATAAPISLSKPVIKP-SLSFPKSDLIPKLP 300

Query: 301 NGSLLKVPNRFPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDPNKV------------- 360
           NGSL +V N FPSKVAT LPQ+SIIPTSDVNLAPVPSHMPVPDPNKV             
Sbjct: 301 NGSLFRVSNGFPSKVATALPQISIIPTSDVNLAPVPSHMPVPDPNKVKIMVRNSKNCSKI 360

Query: 361 -------NVAPVSAVRNGQQCKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRV 420
                  N+APV +VRNGQQCKDLNYCKNLVRQHGNQRN+KEQKPGQDGNNHHHRILKRV
Sbjct: 361 GAIPAQANIAPVCSVRNGQQCKDLNYCKNLVRQHGNQRNSKEQKPGQDGNNHHHRILKRV 420

Query: 421 HEMNAENFRPKIVKQCSYFDTPKGCRNGVNCQFKHDVTFKNQNAKHNSTLLRVTG 456
           HEMNAEN RPKI KQCSYFDTPKGCRNGVNCQFKHD TFKNQNAK       VTG
Sbjct: 421 HEMNAENLRPKIGKQCSYFDTPKGCRNGVNCQFKHDDTFKNQNAKRMKVCGEVTG 467

[Close]

BLAST of Carg07966 vs. ExPASy TrEMBL
Match: A0A6J1HDF9 (zinc finger CCCH domain-containing protein 6-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111463152 PE=4 SV=1)

HSP 1 Score: 766.5 bits (1978), Expect = 6.2e-218
Identity = 395/428 (92.29%), Postives = 398/428 (92.99%), Query Frame = 0


Query: 48  MLHPYTAEFKDCPPGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVE 107
           MLHPYTAEFKDCPPGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVE
Sbjct: 1   MLHPYTAEFKDCPPGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVE 60

Query: 108 SQKLREMRFLEVVYPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDS 167
           SQKLREMRFLEVVYPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDS
Sbjct: 61  SQKLREMRFLEVVYPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDS 120

Query: 168 AAVGNLCTSTMPVTASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLM 227
           AAVGNLCTS+MPVTASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLM
Sbjct: 121 AAVGNLCTSSMPVTASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLM 180

Query: 228 KSMEQGSVINTNLLIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPVS 287
           KSMEQGSVINTNLLIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPV 
Sbjct: 181 KSMEQGSVINTNLLIKIFSDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPV- 240

Query: 288 LSFPKSDLIPKLPNGSLLKVPNRFPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDPNKV 347
            SFPKSDLIPKLPNGSLLKVPN FPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDP+KV
Sbjct: 241 -SFPKSDLIPKLPNGSLLKVPNGFPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDPDKV 300

Query: 348 --------------------NVAPVSAVRNGQQCKDLNYCKNLVRQHGNQRNNKEQKPGQ 407
                               NVAPVS+VRNGQQCKDLNYCKNLVRQHGNQRNNKEQKPGQ
Sbjct: 301 KIMIPNFKNYSKIGAIPAQANVAPVSSVRNGQQCKDLNYCKNLVRQHGNQRNNKEQKPGQ 360

Query: 408 DGNNHHHRILKRVHEMNAENFRPKIVKQCSYFDTPKGCRNGVNCQFKHDVTFKNQNAKHN 456
           DGNNHHHRILKRVHEMNAENFRPKIVKQCSYFDTPKGCRNGVNCQFKHDVTFKNQNAK  
Sbjct: 361 DGNNHHHRILKRVHEMNAENFRPKIVKQCSYFDTPKGCRNGVNCQFKHDVTFKNQNAKRM 420

[Close]

BLAST of Carg07966 vs. TAIR 10
Match: AT1G19860.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 195.3 bits (495), Expect = 1.1e-49
Identity = 149/443 (33.63%), Postives = 216/443 (48.76%), Query Frame = 0


Query: 8   KGVSWTHGVDLCQVKLFSSQDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCPPGFEVTP 67
           K VSW     LCQV+LF S+D PS+ G +S D+L+A++P   HP      + PPGF    
Sbjct: 6   KRVSWPPDFKLCQVRLFISEDSPSQVGSESQDHLQAKSPLASHP---SDDNLPPGFGGPF 65

Query: 68  SGTQ-LANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVVYPRVSA 127
           S  +    LS I LIKW+C ++ ++D  W V AG+ES EVE+Q  RE+R LE  YP  S+
Sbjct: 66  SANESQIKLSDIPLIKWKCSVQILLDREWKVVAGDESKEVEAQNERELRVLEAFYPGASS 125

Query: 128 IPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTSTMPVTAS-NI 187
           IP   SV  D+ED  +DD  T ++PI+P+E+D   ++  DSA       S  P  +  ++
Sbjct: 126 IPPNPSVPADVEDSHHDDQQTIVIPILPVEDD---DIAMDSA-------SDFPTQSGVDV 185

Query: 188 QLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNLLIKIF 247
             EP+I      T      +  LP  G D+ A    AL+ +  S EQGS+I+ +LLIKI 
Sbjct: 186 GTEPSI------TDENTSTSSTLP-AGPDIMA----ALSAISNSKEQGSMIDQDLLIKIL 245

Query: 248 SDPKMIQNLANIPPVSAAVSGSTPLATAAPISLSKPVTKPVSLSFPKSDLIPKLPNGSLL 307
           S+PK+++NL      +   +GS    T++  S S      V  + P S       NG   
Sbjct: 246 SNPKLVENLV----ANRGSAGSVSSNTSSLYSSSTHEANGVVTTAPISS------NGQFY 305

Query: 308 KVPNRFPSKVATVLPQMSIIPTSDVNLAPVPSHMPVPDPNKVNVAPVSAVRNGQQCKDLN 367
             P        T +P M+  P           H P   PN                +D +
Sbjct: 306 AQP------PITHIPPMAYTP-----------HAPQDQPN----------YGAPPARDAS 365

Query: 368 YCKNLVRQHGNQRNNKEQKPGQ----------DGNNHHHRILKRVHEMNAENFRPKIVKQ 427
           Y KNL++QHG  R  +E  P Q           G  +   +    +     + +PKI+K 
Sbjct: 366 YYKNLIQQHGGDR--QETPPVQHLGYRYNLQPGGGPNPEMVNSSNNNQRPRDSKPKIMKA 385

Query: 428 CSYFDTPKGCRNGVNCQFKHDVT 439
           C YF++ +GCR+G NC ++HD T
Sbjct: 426 CMYFNSARGCRHGANCMYQHDAT 385

[Close]

BLAST of Carg07966 vs. TAIR 10
Match: AT3G51180.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 153.7 bits (387), Expect = 3.6e-37
Identity = 161/525 (30.67%), Postives = 227/525 (43.24%), Query Frame = 0


Query: 1   MKRPRKSKGVSWTHGVDLCQVKLFSSQDCPSKAGLKSSDYLEAETPRMLHPYTA---EFK 60
           MKR +K + VSW  G  LCQVK+F ++D P+           A  P+  H Y +      
Sbjct: 4   MKRSKKPR-VSWPPGPKLCQVKVFRTEDSPANV---------ASQPQR-HSYPSRKPRGP 63

Query: 61  DCPPGFEVTPSGTQLANLSSISLIKW-RCPLKFVMDCNWCVTAGEESIEVESQKLREMRF 120
           D PPGFE      +  N+S+I  IKW R P KF ++  W V  G  S E +++ LR  + 
Sbjct: 64  DLPPGFEGNHYAVK-PNVSNIPRIKWKRPPPKFSVNDTWLVGCGGGSSEWQNENLRISKV 123

Query: 121 LEVVYPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTS 180
           LE +YP  SAIPS  SVS  +E E +DDS TP + + PIE    +E E  S    N    
Sbjct: 124 LEAIYPHRSAIPSRPSVSPAVEAECFDDSKTPAIRLTPIE----DESESSSEESSNSKVE 183

Query: 181 TMPVTASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVI 240
           +        QLE      T    + ++    L  +  D++  AS ALT LMK+ EQGS++
Sbjct: 184 SGVTANKQGQLE------TKPLCSTQEQVSGLTGLAPDLSLAASAALTALMKTKEQGSLV 243

Query: 241 NTNLLIKIFSDPKMIQNL-----------ANIPPVSAAVSGSTPL------ATAAPISLS 300
           +T LLIK  SDPK+I+NL            N P V+   S + P+       TA+P++  
Sbjct: 244 DTELLIKFLSDPKLIKNLITDTSGKSSETKNQPIVTNINSATRPVPQPVSAVTASPMARK 303

Query: 301 -KPVTKP------VSLSF--PKSDLIPKLP-NGSL------------LKVPNRFPSKVAT 360
            +PV  P      VS SF  P+  + P  P NGS+            + +P  F   +A 
Sbjct: 304 PQPVIIPQEHSVAVSRSFTNPERRVSPPKPVNGSISPPKPITGKPSSIPMPVHFHVGIAK 363

Query: 361 VLPQMSIIPTSD------------------VNLAPVPSHMPVP----------------- 420
             PQ +  P+S                   V + P P H P                   
Sbjct: 364 EQPQPARFPSSSLPMNLNFHRPPNVFSEPKVIVNPQPQHQPYSAFRTSEMNYVQSSIGLG 423

Query: 421 -------DPNKVNVAPVSAVRNG----QQCKDLNYCKNLVRQHGNQRNNKEQKPGQDGNN 437
                  +   +N +   A+ +     Q  K L+Y KNL+R+HG   +   Q   Q G  
Sbjct: 424 RGPQTGFNSYPMNFSRADAIGSAKPVVQPMKGLDYFKNLIREHGTDNHETNQYHSQTG-- 483

[Close]

BLAST of Carg07966 vs. TAIR 10
Match: AT5G66270.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 136.3 bits (342), Expect = 6.0e-32
Identity = 142/503 (28.23%), Postives = 212/503 (42.15%), Query Frame = 0


Query: 1   MKRPRKSKGVSWTHGVDLCQVKLFSSQDCPSKAGLKSSDYLEAETPRMLHPYTAEFKDCP 60
           MK+ +K + VSW     LCQVKLF S DCP K                         + P
Sbjct: 2   MKKTKKGR-VSWASDSMLCQVKLFLSDDCPVKVA----------------------SNLP 61

Query: 61  PGFEVTPSGTQLANLSSISLIKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVV 120
           PGFE T   T+   +S I  IKW+ P  FV+D    V +G +SIE  S+ LR  + LE  
Sbjct: 62  PGFEATDYATKRI-ISHIPRIKWKRPPLFVLDDALLVGSGGKSIETRSENLRISKVLEAF 121

Query: 121 YPRVSAIPSGASVSTDIEDELYDDSFTPLVPIIPIEEDECEELEPDSAAVGNLCTSTMPV 180
           YP  S IPS  S++  +E+E YDD  TP +P+  +E+      E D+AA           
Sbjct: 122 YPHRSVIPSRPSLTLAVEEEHYDDGKTPNIPLTHVED------ERDAAA----------- 181

Query: 181 TASNIQLEPAIHVCTIDTSAGEKPTEKLPDVGMDVAAVASTALTVLMKSMEQGSVINTNL 240
                           ++S   +    +  +G +++ +AS AL+ L K  EQGS ++ +L
Sbjct: 182 ----------------ESSHSFEAPAAVSGLGPELSLLASAALSALTK--EQGSQVDPDL 241

Query: 241 LIKIFSDPKMIQNL------------------------------------ANIPPVSAAV 300
           L+K+ SDPK+++NL                                     N PP+   V
Sbjct: 242 LVKLLSDPKIVENLINGMKGKPLETANNSLNTDITEPRLAPQHVTSTTMDRNPPPMPGNV 301

Query: 301 SGSTPLATAAPISLSKPVTKP---------VSLSFPK-SDLIPKLPNGSLLKVPNRF--- 360
           +      +    +   P+ KP         ++L+  K + ++   P  S +KV + +   
Sbjct: 302 APHNVPVSVQSSATDPPLPKPNQPMSSALSMNLTLQKPTPVVHNYPLSSGIKVEDSYTAA 361

Query: 361 PSKVAT-----VLPQMS--IIPTSDVNLAPVP-SHMPVPDPNKVNVAPVSAVRNG----- 420
           P K +T     V  Q +  + P S  N+  VP S     DP          +RNG     
Sbjct: 362 PLKPSTGDDVVVSEQKTQLLFPCSSWNMNKVPESARTETDPQ---------IRNGNTNRD 421

Query: 421 -----QQCKDLNYCKNLVRQHGNQRNNKEQKPGQDGNNHHHRILKRVHEMNAENFRPKIV 437
                +  KDL+Y KNL+R+HG  +    +     G   H +I+K            +I 
Sbjct: 422 DQVSAKPVKDLDYFKNLIREHGAVKPATTETNNYKGRVDHKKIVK-----------VRIQ 425

[Close]

BLAST of Carg07966 vs. TAIR 10
Match: AT4G02560.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 43.5 bits (101), Expect = 5.3e-04
Identity = 33/101 (32.67%), Postives = 42/101 (41.58%), Query Frame = 0


Query: 81  IKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVVYPRVSAIPSGASVSTDIEDE 140
           I W  P    +D  W V AG  S E + Q+ R  R  E  Y  +  IP       D E +
Sbjct: 585 IDWHVPPGMELDELWRVAAGGNSKEADVQRNRNRRERETTYQSLQTIPLNPKEPWDREMD 644

Query: 141 LYDDSFTPLVPIIPIEEDECEE----LEPDSAAVGNLCTST 178
            YDDS TP +P     E+   E    L+    A G   TS+
Sbjct: 645 -YDDSLTPEIPSQQPPEESLTEPQDSLDERRIAAGAATTSS 684

[Close]

BLAST of Carg07966 vs. TAIR 10
Match: AT4G02560.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 43.5 bits (101), Expect = 5.3e-04
Identity = 33/101 (32.67%), Postives = 42/101 (41.58%), Query Frame = 0


Query: 81  IKWRCPLKFVMDCNWCVTAGEESIEVESQKLREMRFLEVVYPRVSAIPSGASVSTDIEDE 140
           I W  P    +D  W V AG  S E + Q+ R  R  E  Y  +  IP       D E +
Sbjct: 585 IDWHVPPGMELDELWRVAAGGNSKEADVQRNRNRRERETTYQSLQTIPLNPKEPWDREMD 644

Query: 141 LYDDSFTPLVPIIPIEEDECEE----LEPDSAAVGNLCTST 178
            YDDS TP +P     E+   E    L+    A G   TS+
Sbjct: 645 -YDDSLTPEIPSQQPPEESLTEPQDSLDERRIAAGAATTSS 684

The following BLAST results are available for this feature:

BLAST of Carg07966 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026750.1	1.7e-262	100.00	Zinc finger CCCH domain-containing protein 6, partial [Cucurbita argyrosperma su...	[more]
KAG6594785.1	6.2e-249	96.70	Zinc finger CCCH domain-containing protein 6, partial [Cucurbita argyrosperma su...	[more]
XP_022962755.1	5.8e-247	93.05	zinc finger CCCH domain-containing protein 6-like isoform X1 [Cucurbita moschata...	[more]
XP_022962756.1	3.7e-241	91.58	zinc finger CCCH domain-containing protein 6-like isoform X2 [Cucurbita moschata...	[more]
XP_023518409.1	5.3e-240	90.32	zinc finger CCCH domain-containing protein 6-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg07966 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56XU4	1.5e-48	33.63	Zinc finger CCCH domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q7XM16	3.7e-42	34.41	Zinc finger CCCH domain-containing protein 30 OS=Oryza sativa subsp. japonica OX...	[more]
Q94C33	5.1e-36	30.67	Zinc finger CCCH domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9FH61	8.4e-31	28.23	Zinc finger CCCH domain-containing protein 68 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Carg07966 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HFZ5	2.8e-247	93.05	zinc finger CCCH domain-containing protein 6-like isoform X1 OS=Cucurbita moscha...	[more]
A0A6J1HE37	1.8e-241	91.58	zinc finger CCCH domain-containing protein 6-like isoform X2 OS=Cucurbita moscha...	[more]
A0A6J1KXW5	2.3e-233	88.42	zinc finger CCCH domain-containing protein 6-like isoform X1 OS=Cucurbita maxima...	[more]
A0A6J1KUL1	5.0e-228	87.16	zinc finger CCCH domain-containing protein 6-like isoform X2 OS=Cucurbita maxima...	[more]
A0A6J1HDF9	6.2e-218	92.29	zinc finger CCCH domain-containing protein 6-like isoform X3 OS=Cucurbita moscha...	[more]

BLAST of Carg07966 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19860.1	1.1e-49	33.63	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT3G51180.1	3.6e-37	30.67	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT5G66270.1	6.0e-32	28.23	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT4G02560.1	5.3e-04	32.67	Homeodomain-like superfamily protein	[more]
AT4G02560.2	5.3e-04	32.67	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33400	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED	coord: 1..445
None	No IPR available	PANTHER	PTHR33400:SF9	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED	coord: 1..445
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 410..438 score: 11.27218

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07966-RA	Carg07966-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding