Carg07964 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07964
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	60S ribosomal protein L8
Location	Carg_Chr07: 1939795 .. 1941143 (+)
RNA-Seq Expression	Carg07964
Synteny	Carg07964

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTCTGCGGTAGCGAACTGAAAATCTCCGACCTTGCGGAGACGACATGGGAAGAGTTATTCGTGCTCAGCGTAAGGGAGCGGGATCCGTCTTCAAGTCCCATACCCATCACCGGAAGGGTCCGGCCAGGTTCAGAAGTCTTGACTTCGGCGAACGGAATGGCTATTTGAAAGGAGTCGTGTCTGAGATTATTCACGATCCTGGCCGTGGAGCACCGCTTGCTCGAGTTACCTTTCGCCATCCTTTCAGGTACAAGAAACAGAATGAACTGTTCGTTGCGGCTGAGGGTATGTACACTGGCCAATTTGTTTACTGCGGGAAGAAGGCAAATCTCATGGTCGGAAATGTCTTGCCCCTTAGATCGATTCCTGAAGGTGCCGTCGTTTGTAACGTCGAACACCATGTCGGTGACCGCGGTGTTTTCGCTAGATGTTCCGGAGATTACGCGATTGTTATCAGCCACAATCCTGATAACGACACTTCCAGGTTTTTCTTCAATACTTGTTCTTGAAAGAGTGTTGTTACTAGTAAATTCTGTACTTGGATGATCAAACTTTGTTTACCTTTCACGTTTTGGAGTGGTGTGCTCTGGACAAGATGCGTCTGAGAGGAGGTATGGGGGAGCGATGGTAATAAGGGTTTAGTGTTAGAAATATACAGCGGACTGAAATAAGAATCTTTTGGTCGCCCCTCTTGCCTTAATTTTATTCGTCCTAGCAATGACATTCCAAGCATCAGGCACTTACCAGATACATGGGCGAGGGTGGGCCAACAACATGCCTTACCTCTCGCAATAATAGGCTAAGTGCTTGATTGCACCTTAGAATGCTGGTTGGGAACTGACTCAGGCTTCTCCGTATGCGGTCGTTGGAATTTCACAGATTAGGATTTGTGTGCGTAAATTATTTGCTATGAACAGATAACTGCACATTCCTCGGATGTGGCAGTTGATTGCAGCTATTTCATATGCAAATGAAGTCTTATGTTCATTTTTAATTACTACCAGGATCAAGCTTCCATCTGGTTCGAAGAAAGTAGTTCCAAGTGGGTGTCGTGCCATGGTTGGTCAGGTTGCAGGTGGTGGTAGAACTGAGAAGCCCCTTCTTAAGGCTGGTAATGCTTACCACAAATTCAGAGTGAAGAGAAACTGCTGGCCTAAGGTCCGTGGTGTTGCAATGAATCCCGTCGAGCATCCTCACGGAGGAGGTAACCATCAACACATCGGACACGCCAGCACTGTCAGGCGGGATGCACCTCCTGGTCAAAAGGTTGGTCTCATTGCTGCAAGGAGAACTGGTAGACTGAGAGGACAAGCTGCAGCCACGGCTTCTAAAGCTGATAAGGCTTAA

mRNA sequence

ATCTCTGCGGTAGCGAACTGAAAATCTCCGACCTTGCGGAGACGACATGGGAAGAGTTATTCGTGCTCAGCGTAAGGGAGCGGGATCCGTCTTCAAGTCCCATACCCATCACCGGAAGGGTCCGGCCAGGTTCAGAAGTCTTGACTTCGGCGAACGGAATGGCTATTTGAAAGGAGTCGTGTCTGAGATTATTCACGATCCTGGCCGTGGAGCACCGCTTGCTCGAGTTACCTTTCGCCATCCTTTCAGGTACAAGAAACAGAATGAACTGTTCGTTGCGGCTGAGGGTATGTACACTGGCCAATTTGTTTACTGCGGGAAGAAGGCAAATCTCATGGTCGGAAATGTCTTGCCCCTTAGATCGATTCCTGAAGGTGCCGTCGTTTGTAACGTCGAACACCATGTCGGTGACCGCGGTGTTTTCGCTAGATGTTCCGGAGATTACGCGATTGTTATCAGCCACAATCCTGATAACGACACTTCCAGGATCAAGCTTCCATCTGGTTCGAAGAAAGTAGTTCCAAGTGGGTGTCGTGCCATGGTTGGTCAGGTTGCAGGTGGTGGTAGAACTGAGAAGCCCCTTCTTAAGGCTGGTAATGCTTACCACAAATTCAGAGTGAAGAGAAACTGCTGGCCTAAGGTCCGTGGTGTTGCAATGAATCCCGTCGAGCATCCTCACGGAGGAGGTAACCATCAACACATCGGACACGCCAGCACTGTCAGGCGGGATGCACCTCCTGGTCAAAAGGTTGGTCTCATTGCTGCAAGGAGAACTGGTAGACTGAGAGGACAAGCTGCAGCCACGGCTTCTAAAGCTGATAAGGCTTAA

Coding sequence (CDS)

ATGGGAAGAGTTATTCGTGCTCAGCGTAAGGGAGCGGGATCCGTCTTCAAGTCCCATACCCATCACCGGAAGGGTCCGGCCAGGTTCAGAAGTCTTGACTTCGGCGAACGGAATGGCTATTTGAAAGGAGTCGTGTCTGAGATTATTCACGATCCTGGCCGTGGAGCACCGCTTGCTCGAGTTACCTTTCGCCATCCTTTCAGGTACAAGAAACAGAATGAACTGTTCGTTGCGGCTGAGGGTATGTACACTGGCCAATTTGTTTACTGCGGGAAGAAGGCAAATCTCATGGTCGGAAATGTCTTGCCCCTTAGATCGATTCCTGAAGGTGCCGTCGTTTGTAACGTCGAACACCATGTCGGTGACCGCGGTGTTTTCGCTAGATGTTCCGGAGATTACGCGATTGTTATCAGCCACAATCCTGATAACGACACTTCCAGGATCAAGCTTCCATCTGGTTCGAAGAAAGTAGTTCCAAGTGGGTGTCGTGCCATGGTTGGTCAGGTTGCAGGTGGTGGTAGAACTGAGAAGCCCCTTCTTAAGGCTGGTAATGCTTACCACAAATTCAGAGTGAAGAGAAACTGCTGGCCTAAGGTCCGTGGTGTTGCAATGAATCCCGTCGAGCATCCTCACGGAGGAGGTAACCATCAACACATCGGACACGCCAGCACTGTCAGGCGGGATGCACCTCCTGGTCAAAAGGTTGGTCTCATTGCTGCAAGGAGAACTGGTAGACTGAGAGGACAAGCTGCAGCCACGGCTTCTAAAGCTGATAAGGCTTAA

Protein sequence

MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATASKADKA

Homology

[Close]

BLAST of Carg07964 vs. NCBI nr
Match: XP_023003927.1 (60S ribosomal protein L8-3 [Cucurbita maxima] >XP_023518952.1 60S ribosomal protein L8-3 [Cucurbita pepo subsp. pepo] >KAG6594783.1 60S ribosomal protein L8, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026748.1 60S ribosomal protein L8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 536.2 bits (1380), Expect = 1.6e-148
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKADKA 261
           RRTGRLRGQAAATASKADKA
Sbjct: 241 RRTGRLRGQAAATASKADKA 260

[Close]

BLAST of Carg07964 vs. NCBI nr
Match: XP_022963335.1 (60S ribosomal protein L8-3 [Cucurbita moschata])

HSP 1 Score: 535.0 bits (1377), Expect = 3.5e-148
Identity = 259/260 (99.62%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLR+IPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKADKA 261
           RRTGRLRGQAAATASKADKA
Sbjct: 241 RRTGRLRGQAAATASKADKA 260

[Close]

BLAST of Carg07964 vs. NCBI nr
Match: XP_022133211.1 (60S ribosomal protein L8 [Momordica charantia])

HSP 1 Score: 533.1 bits (1372), Expect = 1.3e-147
Identity = 256/260 (98.46%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGV++EI+HDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIVHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKADKA 261
           RRTGRLRGQAAATA+KADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of Carg07964 vs. NCBI nr
Match: XP_030923722.1 (60S ribosomal protein L8-3-like [Quercus lobata])

HSP 1 Score: 528.5 bits (1360), Expect = 3.3e-146
Identity = 252/259 (97.30%), Postives = 258/259 (99.61%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           +TFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKA L+VGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61  ITFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSR+KLPSG+KK+VPSGCRAM+GQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKADK 260
           RRTGRLRGQAAATASKADK
Sbjct: 241 RRTGRLRGQAAATASKADK 259

[Close]

BLAST of Carg07964 vs. NCBI nr
Match: XP_023873292.1 (60S ribosomal protein L8-3 [Quercus suber] >XP_023874783.1 60S ribosomal protein L8-3 [Quercus suber] >XP_023874791.1 60S ribosomal protein L8-3 [Quercus suber] >XP_030944521.1 60S ribosomal protein L8-3 [Quercus lobata] >KAF3957341.1 hypothetical protein CMV_017639 [Castanea mollissima] >KAF3963308.1 hypothetical protein CMV_012282 [Castanea mollissima] >KAF3963310.1 hypothetical protein CMV_012284 [Castanea mollissima])

HSP 1 Score: 528.5 bits (1360), Expect = 3.3e-146
Identity = 252/260 (96.92%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           +TFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKA L+VGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61  ITFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSR+KLPSG+KK+VPSGCRAM+GQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKADKA 261
           RRTGRLRGQAAATASKADKA
Sbjct: 241 RRTGRLRGQAAATASKADKA 260

[Close]

BLAST of Carg07964 vs. ExPASy Swiss-Prot
Match: P29766 (60S ribosomal protein L8 OS=Solanum lycopersicum OX=4081 GN=RPL8 PE=2 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 5.5e-144
Identity = 242/260 (93.08%), Postives = 254/260 (97.69%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFR+LDFGERNGYLKGV++E+IHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRTLDFGERNGYLKGVITEVIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           VTFRHPFRYK Q ELFVAAEGMYTGQFVYCGKKA LMVGNVLPLRSIPEGAVVCNVEH V
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDN T+R+KLPSG+KK+VPSGCRAM+GQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNGTTRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKADKA 261
           RRTGRLRGQA ATA+KADKA
Sbjct: 241 RRTGRLRGQARATAAKADKA 260

[Close]

BLAST of Carg07964 vs. ExPASy Swiss-Prot
Match: Q42064 (60S ribosomal protein L8-3 OS=Arabidopsis thaliana OX=3702 GN=RPL8C PE=2 SV=2)

HSP 1 Score: 508.8 bits (1309), Expect = 3.5e-143
Identity = 241/258 (93.41%), Postives = 253/258 (98.06%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           V FRHPFR+KKQ ELFVAAEGMYTGQF+YCGKKA L+VGNVLPLRSIPEGAV+CNVEHHV
Sbjct: 61  VAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFAR SGDYAIVI+HNPDNDTSRIKLPSGSKK+VPSGCRAM+GQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKAD 259
           RRTGRLRGQAAA ASKAD
Sbjct: 241 RRTGRLRGQAAALASKAD 258

[Close]

BLAST of Carg07964 vs. ExPASy Swiss-Prot
Match: P46286 (60S ribosomal protein L8-1 OS=Arabidopsis thaliana OX=3702 GN=RPL8A PE=1 SV=2)

HSP 1 Score: 503.1 bits (1294), Expect = 1.9e-141
Identity = 239/258 (92.64%), Postives = 253/258 (98.06%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           VTFRHPFR+KKQ ELFVAAEGMYTGQF+YCGKKA L+VGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGV AR SGDYAIVI+HNPD+DT+RIKLPSGSKK+VPSGCRAM+GQVAGGGRTEKP+L
Sbjct: 121 GDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKAD 259
           RRTGRLRGQAAA+A+KAD
Sbjct: 241 RRTGRLRGQAAASAAKAD 258

[Close]

BLAST of Carg07964 vs. ExPASy Swiss-Prot
Match: P25998 (60S ribosomal protein L8 OS=Nicotiana tabacum OX=4097 GN=RPL8 PE=2 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 4.3e-141
Identity = 239/260 (91.92%), Postives = 250/260 (96.15%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGR+IRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGV++E+IHDPGRGAPLAR
Sbjct: 1   MGRLIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEVIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           VTFR+PFRY  Q ELFVAAEGMYTGQFVYCGKKA LMVGNVLPLRSIPEGAVVCNVEH V
Sbjct: 61  VTFRYPFRYNHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSG YAIVISHNPDN T+RIKLPSGSKK+VPSGCR M+GQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGAYAIVISHNPDNGTTRIKLPSGSKKIVPSGCRRMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTV RDAPPGQKVGLIA 
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVARDAPPGQKVGLIAG 240

Query: 241 RRTGRLRGQAAATASKADKA 261
           RRTGRLRGQAAATA+KADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of Carg07964 vs. ExPASy Swiss-Prot
Match: Q4PSL7 (60S ribosomal protein L8-2 OS=Arabidopsis thaliana OX=3702 GN=RPL8B PE=2 SV=3)

HSP 1 Score: 459.5 bits (1181), Expect = 2.5e-128
Identity = 219/259 (84.56%), Postives = 238/259 (91.89%), Query Frame = 0


Query: 1   MGRVIRAQRKG-AGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLA 60
           MGRVIRAQRKG AGSVFKSHTHHRKGPA+FRSLD+GERNGYLKG+V+EIIHDPGRGAPLA
Sbjct: 1   MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLA 60

Query: 61  RVTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHH 120
           RV FRHPFRY KQ ELFVAAEGMYTGQ++YCGKKANLMVGNVLPL SIPEGAV+CNVE H
Sbjct: 61  RVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELH 120

Query: 121 VGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPL 180
           VGDRG  AR SGDYAIVI+HNP+++T+R+KLPSGSKK++PS CRAM+GQVAGGGRTEKPL
Sbjct: 121 VGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPL 180

Query: 181 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 240
           LKAGNAYHK++ KRNCWP VRGVAMNPVEHPHGGGNHQHIGHASTVRRD   G KVG IA
Sbjct: 181 LKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQIA 240

Query: 241 ARRTGRLRGQAAATASKAD 259
           ARRTGR RG AA  A+KAD
Sbjct: 241 ARRTGRRRGAAATLAAKAD 259

[Close]

BLAST of Carg07964 vs. ExPASy TrEMBL
Match: A0A6J1KNZ2 (60S ribosomal protein L8-3 OS=Cucurbita maxima OX=3661 GN=LOC111497370 PE=3 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 7.7e-149
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKADKA 261
           RRTGRLRGQAAATASKADKA
Sbjct: 241 RRTGRLRGQAAATASKADKA 260

[Close]

BLAST of Carg07964 vs. ExPASy TrEMBL
Match: A0A6J1HHP9 (60S ribosomal protein L8-3 OS=Cucurbita moschata OX=3662 GN=LOC111463573 PE=3 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 1.7e-148
Identity = 259/260 (99.62%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLR+IPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKADKA 261
           RRTGRLRGQAAATASKADKA
Sbjct: 241 RRTGRLRGQAAATASKADKA 260

[Close]

BLAST of Carg07964 vs. ExPASy TrEMBL
Match: A0A6J1BUD7 (60S ribosomal protein L8 OS=Momordica charantia OX=3673 GN=LOC111005865 PE=3 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 6.5e-148
Identity = 256/260 (98.46%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGV++EI+HDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIVHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKADKA 261
           RRTGRLRGQAAATA+KADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]

BLAST of Carg07964 vs. ExPASy TrEMBL
Match: A0A7N2MYY1 (Ribosomal_L2_C domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 1.6e-146
Identity = 252/260 (96.92%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           +TFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKA L+VGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61  ITFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSR+KLPSG+KK+VPSGCRAM+GQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKADKA 261
           RRTGRLRGQAAATASKADKA
Sbjct: 241 RRTGRLRGQAAATASKADKA 260

[Close]

BLAST of Carg07964 vs. ExPASy TrEMBL
Match: A0A7N2R6Q3 (Ribosomal_L2_C domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 1.6e-146
Identity = 252/259 (97.30%), Postives = 258/259 (99.61%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           +TFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKA L+VGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61  ITFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSR+KLPSG+KK+VPSGCRAM+GQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKADK 260
           RRTGRLRGQAAATASKADK
Sbjct: 241 RRTGRLRGQAAATASKADK 259

[Close]

BLAST of Carg07964 vs. TAIR 10
Match: AT4G36130.1 (Ribosomal protein L2 family )

HSP 1 Score: 508.8 bits (1309), Expect = 2.5e-144
Identity = 241/258 (93.41%), Postives = 253/258 (98.06%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           V FRHPFR+KKQ ELFVAAEGMYTGQF+YCGKKA L+VGNVLPLRSIPEGAV+CNVEHHV
Sbjct: 61  VAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFAR SGDYAIVI+HNPDNDTSRIKLPSGSKK+VPSGCRAM+GQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKAD 259
           RRTGRLRGQAAA ASKAD
Sbjct: 241 RRTGRLRGQAAALASKAD 258

[Close]

BLAST of Carg07964 vs. TAIR 10
Match: AT2G18020.1 (Ribosomal protein L2 family )

HSP 1 Score: 503.1 bits (1294), Expect = 1.4e-142
Identity = 239/258 (92.64%), Postives = 253/258 (98.06%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           VTFRHPFR+KKQ ELFVAAEGMYTGQF+YCGKKA L+VGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGV AR SGDYAIVI+HNPD+DT+RIKLPSGSKK+VPSGCRAM+GQVAGGGRTEKP+L
Sbjct: 121 GDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKAD 259
           RRTGRLRGQAAA+A+KAD
Sbjct: 241 RRTGRLRGQAAASAAKAD 258

[Close]

BLAST of Carg07964 vs. TAIR 10
Match: AT3G51190.1 (Ribosomal protein L2 family )

HSP 1 Score: 459.5 bits (1181), Expect = 1.8e-129
Identity = 219/259 (84.56%), Postives = 238/259 (91.89%), Query Frame = 0


Query: 1   MGRVIRAQRKG-AGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLA 60
           MGRVIRAQRKG AGSVFKSHTHHRKGPA+FRSLD+GERNGYLKG+V+EIIHDPGRGAPLA
Sbjct: 1   MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLA 60

Query: 61  RVTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHH 120
           RV FRHPFRY KQ ELFVAAEGMYTGQ++YCGKKANLMVGNVLPL SIPEGAV+CNVE H
Sbjct: 61  RVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELH 120

Query: 121 VGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPL 180
           VGDRG  AR SGDYAIVI+HNP+++T+R+KLPSGSKK++PS CRAM+GQVAGGGRTEKPL
Sbjct: 121 VGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPL 180

Query: 181 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 240
           LKAGNAYHK++ KRNCWP VRGVAMNPVEHPHGGGNHQHIGHASTVRRD   G KVG IA
Sbjct: 181 LKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQIA 240

Query: 241 ARRTGRLRGQAAATASKAD 259
           ARRTGR RG AA  A+KAD
Sbjct: 241 ARRTGRRRGAAATLAAKAD 259

[Close]

BLAST of Carg07964 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 104.0 bits (258), Expect = 1.9e-22
Identity = 66/215 (30.70%), Postives = 103/215 (47.91%), Query Frame = 0


Query: 4   VIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTF 63
           +I A+ +G G        H++    +R +DF      + G +  I +DP R A +  + +
Sbjct: 46  IITARHRGGG--------HKR---LYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHY 105

Query: 64  RHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHVGDR 123
                   +    +   G   G  +  G +  + +GN LPL  +P G  + N+E  +G  
Sbjct: 106 G-----DGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRG 165

Query: 124 GVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLLKAG 183
           G  AR +G  A +I+   +  ++ +KLPSG  +++   C A VGQV   G  +K L +AG
Sbjct: 166 GQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAG 225

Query: 184 NAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 215
           +          CW    P VRGV MNPV+HPHGGG
Sbjct: 226 S---------KCWLGKRPVVRGVVMNPVDHPHGGG 233

[Close]

BLAST of Carg07964 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 104.0 bits (258), Expect = 1.9e-22
Identity = 66/215 (30.70%), Postives = 103/215 (47.91%), Query Frame = 0


Query: 4   VIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTF 63
           +I A+ +G G        H++    +R +DF      + G +  I +DP R A +  + +
Sbjct: 46  IITARHRGGG--------HKR---LYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHY 105

Query: 64  RHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHVGDR 123
                   +    +   G   G  +  G +  + +GN LPL  +P G  + N+E  +G  
Sbjct: 106 G-----DGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRG 165

Query: 124 GVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLLKAG 183
           G  AR +G  A +I+   +  ++ +KLPSG  +++   C A VGQV   G  +K L +AG
Sbjct: 166 GQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAG 225

Query: 184 NAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 215
           +          CW    P VRGV MNPV+HPHGGG
Sbjct: 226 S---------KCWLGKRPVVRGVVMNPVDHPHGGG 233

The following BLAST results are available for this feature:

BLAST of Carg07964 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023003927.1	1.6e-148	100.00	60S ribosomal protein L8-3 [Cucurbita maxima] >XP_023518952.1 60S ribosomal prot...	[more]
XP_022963335.1	3.5e-148	99.62	60S ribosomal protein L8-3 [Cucurbita moschata]	[more]
XP_022133211.1	1.3e-147	98.46	60S ribosomal protein L8 [Momordica charantia]	[more]
XP_030923722.1	3.3e-146	97.30	60S ribosomal protein L8-3-like [Quercus lobata]	[more]
XP_023873292.1	3.3e-146	96.92	60S ribosomal protein L8-3 [Quercus suber] >XP_023874783.1 60S ribosomal protein...	[more]

BLAST of Carg07964 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29766	5.5e-144	93.08	60S ribosomal protein L8 OS=Solanum lycopersicum OX=4081 GN=RPL8 PE=2 SV=1	[more]
Q42064	3.5e-143	93.41	60S ribosomal protein L8-3 OS=Arabidopsis thaliana OX=3702 GN=RPL8C PE=2 SV=2	[more]
P46286	1.9e-141	92.64	60S ribosomal protein L8-1 OS=Arabidopsis thaliana OX=3702 GN=RPL8A PE=1 SV=2	[more]
P25998	4.3e-141	91.92	60S ribosomal protein L8 OS=Nicotiana tabacum OX=4097 GN=RPL8 PE=2 SV=1	[more]
Q4PSL7	2.5e-128	84.56	60S ribosomal protein L8-2 OS=Arabidopsis thaliana OX=3702 GN=RPL8B PE=2 SV=3	[more]

BLAST of Carg07964 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KNZ2	7.7e-149	100.00	60S ribosomal protein L8-3 OS=Cucurbita maxima OX=3661 GN=LOC111497370 PE=3 SV=1	[more]
A0A6J1HHP9	1.7e-148	99.62	60S ribosomal protein L8-3 OS=Cucurbita moschata OX=3662 GN=LOC111463573 PE=3 SV...	[more]
A0A6J1BUD7	6.5e-148	98.46	60S ribosomal protein L8 OS=Momordica charantia OX=3673 GN=LOC111005865 PE=3 SV=...	[more]
A0A7N2MYY1	1.6e-146	96.92	Ribosomal_L2_C domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]
A0A7N2R6Q3	1.6e-146	97.30	Ribosomal_L2_C domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]

BLAST of Carg07964 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36130.1	2.5e-144	93.41	Ribosomal protein L2 family	[more]
AT2G18020.1	1.4e-142	92.64	Ribosomal protein L2 family	[more]
AT3G51190.1	1.8e-129	84.56	Ribosomal protein L2 family	[more]
ATCG00830.1	1.9e-22	30.70	ribosomal protein L2	[more]
ATCG01310.1	1.9e-22	30.70	ribosomal protein L2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002171	Ribosomal protein L2	SMART	SM01383	Ribosomal_L2_2	coord: 11..90 e-value: 6.6E-33 score: 125.3
IPR002171	Ribosomal protein L2	PIRSF	PIRSF002158	RPL2p_RPL2a_RPL8e_RPL2o	coord: 1..255 e-value: 6.7E-70 score: 233.4
IPR002171	Ribosomal protein L2	PANTHER	PTHR13691	RIBOSOMAL PROTEIN L2	coord: 1..260
IPR022669	Ribosomal protein L2, C-terminal	SMART	SM01382	Ribosomal_L2_C_2	coord: 96..231 e-value: 7.8E-69 score: 244.7
IPR022669	Ribosomal protein L2, C-terminal	PFAM	PF03947	Ribosomal_L2_C	coord: 98..224 e-value: 2.9E-45 score: 153.5
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 90..169 e-value: 1.5E-26 score: 94.0
IPR022666	Ribosomal Proteins L2, RNA binding domain	PFAM	PF00181	Ribosomal_L2	coord: 13..90 e-value: 1.2E-17 score: 63.6
IPR014726	Ribosomal protein L2, domain 3	GENE3D	4.10.950.10	Ribosomal protein L2, domain 3	coord: 170..247 e-value: 1.9E-43 score: 148.7
None	No IPR available	GENE3D	2.40.50.140		coord: 1..86 e-value: 1.8E-40 score: 138.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..230
None	No IPR available	PANTHER	PTHR13691:SF48	60S RIBOSOMAL PROTEIN L8	coord: 1..260
IPR022671	Ribosomal protein L2, conserved site	PROSITE	PS00467	RIBOSOMAL_L2	coord: 197..208
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 99..246
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 1..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07964-RA	Carg07964-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome