Carg07952 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07952
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Chaperone protein dnaJ 11
Location	Carg_Chr07: 1859106 .. 1859594 (-)
RNA-Seq Expression	Carg07952
Synteny	Carg07952

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATATCTGCCTTTTCTCCTCTTACTCTGCCGCCTCTTCCGGCCAGATTCTCTCCCCGGGAATTCACACATGTCAGATTCCGGCCACCGCAAGCCTTCTCCGCCACCGCTACCGCCTCATCTACCGCCTACGCCACCAGAGAGAACACCGCCTCACCCTATCTCAACCTTCAACGAATGCCCTCCTACACTTCGCTTTACGACGTCCTCGGACTCCCTACCGGAGCTTCTTTTCAGGAAATCAAATCGGCATATCGACGCCTTGCCAGAGTTTCACATCCGGATGTGGCGGCCGTCGACCGGAAAGACTCCTCTGCCAATGATTTTATGAAGATTCACGCCGCTTATTCCACTCTGTCCGATCCTGAAAAACGCGCCGATTACGATCGCAAGCTTCTCCGCCGGTGCCGGCCTGTAGCTTCCGTGCGGATGGCTTCTGGATTTACTGGTTACACTCGCCGGAATTGGGAGTCTGATCAGTGCTGGTAA

mRNA sequence

ATGATATCTGCCTTTTCTCCTCTTACTCTGCCGCCTCTTCCGGCCAGATTCTCTCCCCGGGAATTCACACATGTCAGATTCCGGCCACCGCAAGCCTTCTCCGCCACCGCTACCGCCTCATCTACCGCCTACGCCACCAGAGAGAACACCGCCTCACCCTATCTCAACCTTCAACGAATGCCCTCCTACACTTCGCTTTACGACGTCCTCGGACTCCCTACCGGAGCTTCTTTTCAGGAAATCAAATCGGCATATCGACGCCTTGCCAGAGTTTCACATCCGGATGTGGCGGCCGTCGACCGGAAAGACTCCTCTGCCAATGATTTTATGAAGATTCACGCCGCTTATTCCACTCTGTCCGATCCTGAAAAACGCGCCGATTACGATCGCAAGCTTCTCCGCCGGTGCCGGCCTGTAGCTTCCGTGCGGATGGCTTCTGGATTTACTGGTTACACTCGCCGGAATTGGGAGTCTGATCAGTGCTGGTAA

Coding sequence (CDS)

ATGATATCTGCCTTTTCTCCTCTTACTCTGCCGCCTCTTCCGGCCAGATTCTCTCCCCGGGAATTCACACATGTCAGATTCCGGCCACCGCAAGCCTTCTCCGCCACCGCTACCGCCTCATCTACCGCCTACGCCACCAGAGAGAACACCGCCTCACCCTATCTCAACCTTCAACGAATGCCCTCCTACACTTCGCTTTACGACGTCCTCGGACTCCCTACCGGAGCTTCTTTTCAGGAAATCAAATCGGCATATCGACGCCTTGCCAGAGTTTCACATCCGGATGTGGCGGCCGTCGACCGGAAAGACTCCTCTGCCAATGATTTTATGAAGATTCACGCCGCTTATTCCACTCTGTCCGATCCTGAAAAACGCGCCGATTACGATCGCAAGCTTCTCCGCCGGTGCCGGCCTGTAGCTTCCGTGCGGATGGCTTCTGGATTTACTGGTTACACTCGCCGGAATTGGGAGTCTGATCAGTGCTGGTAA

Protein sequence

MISAFSPLTLPPLPARFSPREFTHVRFRPPQAFSATATASSTAYATRENTASPYLNLQRMPSYTSLYDVLGLPTGASFQEIKSAYRRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTLSDPEKRADYDRKLLRRCRPVASVRMASGFTGYTRRNWESDQCW

Homology

[Close]

BLAST of Carg07952 vs. NCBI nr
Match: XP_022926321.1 (chaperone protein dnaJ 11, chloroplastic [Cucurbita moschata] >KAG6594772.1 Chaperone protein dnaJ 11, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026736.1 Chaperone protein dnaJ 11, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 325.9 bits (834), Expect = 2.0e-85
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MISAFSPLTLPPLPARFSPREFTHVRFRPPQAFSATATASSTAYATRENTASPYLNLQRM 60
           MISAFSPLTLPPLPARFSPREFTHVRFRPPQAFSATATASSTAYATRENTASPYLNLQRM
Sbjct: 1   MISAFSPLTLPPLPARFSPREFTHVRFRPPQAFSATATASSTAYATRENTASPYLNLQRM 60

Query: 61  PSYTSLYDVLGLPTGASFQEIKSAYRRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTLS 120
           PSYTSLYDVLGLPTGASFQEIKSAYRRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTLS
Sbjct: 61  PSYTSLYDVLGLPTGASFQEIKSAYRRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTLS 120

Query: 121 DPEKRADYDRKLLRRCRPVASVRMASGFTGYTRRNWESDQCW 163
           DPEKRADYDRKLLRRCRPVASVRMASGFTGYTRRNWESDQCW
Sbjct: 121 DPEKRADYDRKLLRRCRPVASVRMASGFTGYTRRNWESDQCW 162

[Close]

BLAST of Carg07952 vs. NCBI nr
Match: XP_023003937.1 (chaperone protein dnaJ 11, chloroplastic [Cucurbita maxima])

HSP 1 Score: 318.9 bits (816), Expect = 2.5e-83
Identity = 158/162 (97.53%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 1   MISAFSPLTLPPLPARFSPREFTHVRFRPPQAFSATATASSTAYATRENTASPYLNLQRM 60
           MISAFSPLTLPPLPARFSPREFTHVRFRPPQAFSATATASSTAYATRENTA PYLNLQRM
Sbjct: 1   MISAFSPLTLPPLPARFSPREFTHVRFRPPQAFSATATASSTAYATRENTALPYLNLQRM 60

Query: 61  PSYTSLYDVLGLPTGASFQEIKSAYRRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTLS 120
           PSYTSLYDVLGLPT ASFQEIKSAYRRLARVSHPDVAA+DRKDSSANDFMKIHAAYSTLS
Sbjct: 61  PSYTSLYDVLGLPTEASFQEIKSAYRRLARVSHPDVAAIDRKDSSANDFMKIHAAYSTLS 120

Query: 121 DPEKRADYDRKLLRRCRPVASVRMASGFTGYTRRNWESDQCW 163
           DPEKRADYDRKLLRRCRPVASVRMASGFTGYTRRNWE+DQCW
Sbjct: 121 DPEKRADYDRKLLRRCRPVASVRMASGFTGYTRRNWETDQCW 162

[Close]

BLAST of Carg07952 vs. NCBI nr
Match: XP_023517398.1 (chaperone protein dnaJ 11, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.1 bits (806), Expect = 3.6e-82
Identity = 159/163 (97.55%), Postives = 161/163 (98.77%), Query Frame = 0


Query: 1   MISAFSPLTLPPLPARFSPREFTHVRFRPPQAFSATATASSTAYATREN-TASPYLNLQR 60
           MISA SPLTLPPLPARFSPREFTHVRFRPPQAFSATATASSTAYATREN TASPYLNLQR
Sbjct: 1   MISASSPLTLPPLPARFSPREFTHVRFRPPQAFSATATASSTAYATRENTTASPYLNLQR 60

Query: 61  MPSYTSLYDVLGLPTGASFQEIKSAYRRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTL 120
           MPSYTSLYDVLGLPTGASFQEIKSAYRRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTL
Sbjct: 61  MPSYTSLYDVLGLPTGASFQEIKSAYRRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTL 120

Query: 121 SDPEKRADYDRKLLRRCRPVASVRMASGFTGYTRRNWESDQCW 163
           SDPEKRADYDRKLLRRCRPVASVRMASGFTGYTRR+WE+DQCW
Sbjct: 121 SDPEKRADYDRKLLRRCRPVASVRMASGFTGYTRRSWETDQCW 163

[Close]

BLAST of Carg07952 vs. NCBI nr
Match: XP_038883841.1 (chaperone protein dnaJ 11, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 289.3 bits (739), Expect = 2.1e-74
Identity = 145/162 (89.51%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MISAFSPLTLPPLPARFSPREFTHVRFRPPQAFSATATASSTAYATRENTASPYLNLQRM 60
           M+SA SPLTLPPLP R SPREFT VRFRPPQAFS+TATASSTAYA+RE+TASPYLNLQRM
Sbjct: 1   MLSASSPLTLPPLPLRSSPREFTRVRFRPPQAFSSTATASSTAYASREDTASPYLNLQRM 60

Query: 61  PSYTSLYDVLGLPTGASFQEIKSAYRRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTLS 120
            S TSLY+VLG+P+GASFQEIKSAYRRLARV HPDVAAVDRKDSSA DFMKIHAAYSTLS
Sbjct: 61  ASCTSLYEVLGIPSGASFQEIKSAYRRLARVCHPDVAAVDRKDSSATDFMKIHAAYSTLS 120

Query: 121 DPEKRADYDRKLLRRCRPVASVRMASGFTGYTRRNWESDQCW 163
           DPEKRADYDRKLLRR RPVASVRMASGFTGYTRRNWE+DQCW
Sbjct: 121 DPEKRADYDRKLLRRFRPVASVRMASGFTGYTRRNWETDQCW 162

[Close]

BLAST of Carg07952 vs. NCBI nr
Match: KAG6603908.1 (Chaperone protein dnaJ 11, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034090.1 Chaperone protein dnaJ 11, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 288.5 bits (737), Expect = 3.6e-74
Identity = 145/162 (89.51%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 1   MISAFSPLTLPPLPARFSPREFTHVRFRPPQAFSATATASSTAYATRENTASPYLNLQRM 60
           M+SA SPLTLPPLPAR SPREFT VRFRPPQAFS+TATASSTAYA+RE+TASPYLNLQRM
Sbjct: 1   MLSAASPLTLPPLPARSSPREFTRVRFRPPQAFSSTATASSTAYASREDTASPYLNLQRM 60

Query: 61  PSYTSLYDVLGLPTGASFQEIKSAYRRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTLS 120
            S TSLY+VLG+PTGASFQEIKSAYRRLARV HPDV AVDRKDSSA DFMKIHAAYSTLS
Sbjct: 61  ASCTSLYEVLGIPTGASFQEIKSAYRRLARVCHPDVVAVDRKDSSATDFMKIHAAYSTLS 120

Query: 121 DPEKRADYDRKLLRRCRPVASVRMASGFTGYTRRNWESDQCW 163
           DPEKRADYDRK LRR RPVASVRMASGFTGYTRRNWE+DQCW
Sbjct: 121 DPEKRADYDRKHLRRYRPVASVRMASGFTGYTRRNWETDQCW 162

[Close]

BLAST of Carg07952 vs. ExPASy Swiss-Prot
Match: Q9FYB5 (Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ11 PE=1 SV=2)

HSP 1 Score: 129.4 bits (324), Expect = 3.6e-29
Identity = 77/159 (48.43%), Postives = 99/159 (62.26%), Query Frame = 0


Query: 18  SPREFTH--VRFRPPQA----------FSATATASSTAYATRENTASPYLNLQRMPSY-T 77
           SP  FTH  +   PP +           S    ++S +Y   E++   +   +R+ +   
Sbjct: 5   SPTSFTHPFLSSSPPLSPISPPSRTARISPPLVSASCSYTYTEDSPRLHQIPRRLTTVPA 64

Query: 78  SLYDVLGLPTGASFQEIKSAYRRLARVSHPDVAAVDR-KDSSANDFMKIHAAYSTLSDPE 137
           SLYDVL +P GA+ Q+IKSAYRRLAR+ HPDVA  DR   SSA++FMKIHAAY TLSDPE
Sbjct: 65  SLYDVLEVPLGATSQDIKSAYRRLARICHPDVAGTDRTSSSSADEFMKIHAAYCTLSDPE 124

Query: 138 KRADYDRKLLRRCRPVASVRMASGFTGYTRRNWESDQCW 163
           KR+ YDR++LRR RP+      SG   Y  RNWE+DQCW
Sbjct: 125 KRSVYDRRMLRRSRPLTV--GTSGLGSYVGRNWETDQCW 161

[Close]

BLAST of Carg07952 vs. ExPASy Swiss-Prot
Match: B5YAR4 (Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) OX=309799 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.5e-11
Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = 0


Query: 60  MPSYTSLYDVLGLPTGASFQEIKSAYRRLARVSHPDVAAVDRKDSSAND-FMKIHAAYST 119
           MP+    Y++LG+P  A+  EIK AYRRL R  HPD+     KD SA++ F +I+ AY  
Sbjct: 1   MPTKKDYYEILGVPRNATQDEIKQAYRRLVRQYHPDL----NKDPSAHEKFKEINEAYEV 60

Query: 120 LSDPEKRADYDR 131
           LSDP+KRA YD+
Sbjct: 61  LSDPQKRAQYDQ 68

[Close]

BLAST of Carg07952 vs. ExPASy Swiss-Prot
Match: Q9SDN0 (Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ20 PE=1 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 1.0e-10
Identity = 38/112 (33.93%), Postives = 60/112 (53.57%), Query Frame = 0


Query: 28  RPPQAFSATATASSTAYATRENTASPYLNLQ-------RMPSYTSLYDVLGLPTGASFQE 87
           +P  +   T+  ++ +Y TR   +S  +  +       +     S YD+LG+    +  E
Sbjct: 22  QPISSLQPTSIPTTISYPTRTRFSSTRIQSRLTHDDPVKQSEDLSFYDLLGVTESVTLPE 81

Query: 88  IKSAYRRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTLSDPEKRADYDRKL 133
           IK AY++LAR  HPDV+  DR +   + F+++  AY TLSDP +R  YDR L
Sbjct: 82  IKQAYKQLARKYHPDVSPPDRVEEYTDRFIRVQEAYETLSDPRRRVLYDRDL 133

[Close]

BLAST of Carg07952 vs. ExPASy Swiss-Prot
Match: Q2HJ94 (DnaJ homolog subfamily A member 2 OS=Bos taurus OX=9913 GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.9e-10
Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 64  TSLYDVLGLPTGASFQEIKSAYRRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTLSDPE 123
           T LYD+LG+P GAS  E+K AYR+LA+  HP     D+  ++ + F +I  AY  LS+PE
Sbjct: 7   TKLYDILGVPPGASENELKKAYRKLAKEYHP-----DKNPNAGDKFKEISFAYEVLSNPE 66

Query: 124 KRADYDR 131
           KR  YDR
Sbjct: 67  KRELYDR 68

[Close]

BLAST of Carg07952 vs. ExPASy Swiss-Prot
Match: O60884 (DnaJ homolog subfamily A member 2 OS=Homo sapiens OX=9606 GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.9e-10
Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 64  TSLYDVLGLPTGASFQEIKSAYRRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTLSDPE 123
           T LYD+LG+P GAS  E+K AYR+LA+  HP     D+  ++ + F +I  AY  LS+PE
Sbjct: 7   TKLYDILGVPPGASENELKKAYRKLAKEYHP-----DKNPNAGDKFKEISFAYEVLSNPE 66

Query: 124 KRADYDR 131
           KR  YDR
Sbjct: 67  KRELYDR 68

[Close]

BLAST of Carg07952 vs. ExPASy TrEMBL
Match: A0A6J1EEJ6 (chaperone protein dnaJ 11, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111433507 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 9.8e-86
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MISAFSPLTLPPLPARFSPREFTHVRFRPPQAFSATATASSTAYATRENTASPYLNLQRM 60
           MISAFSPLTLPPLPARFSPREFTHVRFRPPQAFSATATASSTAYATRENTASPYLNLQRM
Sbjct: 1   MISAFSPLTLPPLPARFSPREFTHVRFRPPQAFSATATASSTAYATRENTASPYLNLQRM 60

Query: 61  PSYTSLYDVLGLPTGASFQEIKSAYRRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTLS 120
           PSYTSLYDVLGLPTGASFQEIKSAYRRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTLS
Sbjct: 61  PSYTSLYDVLGLPTGASFQEIKSAYRRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTLS 120

Query: 121 DPEKRADYDRKLLRRCRPVASVRMASGFTGYTRRNWESDQCW 163
           DPEKRADYDRKLLRRCRPVASVRMASGFTGYTRRNWESDQCW
Sbjct: 121 DPEKRADYDRKLLRRCRPVASVRMASGFTGYTRRNWESDQCW 162

[Close]

BLAST of Carg07952 vs. ExPASy TrEMBL
Match: A0A6J1KP03 (chaperone protein dnaJ 11, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111497379 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.2e-83
Identity = 158/162 (97.53%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 1   MISAFSPLTLPPLPARFSPREFTHVRFRPPQAFSATATASSTAYATRENTASPYLNLQRM 60
           MISAFSPLTLPPLPARFSPREFTHVRFRPPQAFSATATASSTAYATRENTA PYLNLQRM
Sbjct: 1   MISAFSPLTLPPLPARFSPREFTHVRFRPPQAFSATATASSTAYATRENTALPYLNLQRM 60

Query: 61  PSYTSLYDVLGLPTGASFQEIKSAYRRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTLS 120
           PSYTSLYDVLGLPT ASFQEIKSAYRRLARVSHPDVAA+DRKDSSANDFMKIHAAYSTLS
Sbjct: 61  PSYTSLYDVLGLPTEASFQEIKSAYRRLARVSHPDVAAIDRKDSSANDFMKIHAAYSTLS 120

Query: 121 DPEKRADYDRKLLRRCRPVASVRMASGFTGYTRRNWESDQCW 163
           DPEKRADYDRKLLRRCRPVASVRMASGFTGYTRRNWE+DQCW
Sbjct: 121 DPEKRADYDRKLLRRCRPVASVRMASGFTGYTRRNWETDQCW 162

[Close]

BLAST of Carg07952 vs. ExPASy TrEMBL
Match: A0A6J1IP70 (chaperone protein dnaJ 11, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111478685 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.3e-74
Identity = 144/162 (88.89%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 1   MISAFSPLTLPPLPARFSPREFTHVRFRPPQAFSATATASSTAYATRENTASPYLNLQRM 60
           M+SA SPLTLPPLPAR SPREFT VRFRPPQAFS+TATASSTAYA+RE+TASPYLNLQRM
Sbjct: 1   MLSAASPLTLPPLPARSSPREFTRVRFRPPQAFSSTATASSTAYASREDTASPYLNLQRM 60

Query: 61  PSYTSLYDVLGLPTGASFQEIKSAYRRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTLS 120
            S TSLY+VLG+PTGASFQEIKSAYRRLARV HPDV A+DRKDSSA DFMKIHAAYSTLS
Sbjct: 61  ASCTSLYEVLGIPTGASFQEIKSAYRRLARVCHPDVVAIDRKDSSATDFMKIHAAYSTLS 120

Query: 121 DPEKRADYDRKLLRRCRPVASVRMASGFTGYTRRNWESDQCW 163
           DPEKRADYDRK LRR RPVASVRMASGFTGYTRRNWE+DQCW
Sbjct: 121 DPEKRADYDRKHLRRYRPVASVRMASGFTGYTRRNWETDQCW 162

[Close]

BLAST of Carg07952 vs. ExPASy TrEMBL
Match: A0A5A7SKL2 (Chaperone protein dnaJ 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001260 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 7.3e-73
Identity = 141/162 (87.04%), Postives = 151/162 (93.21%), Query Frame = 0


Query: 1   MISAFSPLTLPPLPARFSPREFTHVRFRPPQAFSATATASSTAYATRENTASPYLNLQRM 60
           M+SA SPLTLPPLP R SPR+ T VRFRPPQAFS+TATASSTAYA+R++TASPYLNLQ M
Sbjct: 1   MLSASSPLTLPPLPVRPSPRDSTRVRFRPPQAFSSTATASSTAYASRQDTASPYLNLQTM 60

Query: 61  PSYTSLYDVLGLPTGASFQEIKSAYRRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTLS 120
           PS TSLY+VLG+PTGASFQEIKSAYRRLAR+ HPDVAAVDRKDSSA DFMKIHAAYSTLS
Sbjct: 61  PSCTSLYEVLGIPTGASFQEIKSAYRRLARLCHPDVAAVDRKDSSATDFMKIHAAYSTLS 120

Query: 121 DPEKRADYDRKLLRRCRPVASVRMASGFTGYTRRNWESDQCW 163
           DPEKRADYDRKLLRR RPVAS RMASGFTGYTRRNWE+DQCW
Sbjct: 121 DPEKRADYDRKLLRRYRPVASARMASGFTGYTRRNWETDQCW 162

[Close]

BLAST of Carg07952 vs. ExPASy TrEMBL
Match: A0A1S3B225 (chaperone protein dnaJ 11, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485131 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 7.3e-73
Identity = 141/162 (87.04%), Postives = 151/162 (93.21%), Query Frame = 0


Query: 1   MISAFSPLTLPPLPARFSPREFTHVRFRPPQAFSATATASSTAYATRENTASPYLNLQRM 60
           M+SA SPLTLPPLP R SPR+ T VRFRPPQAFS+TATASSTAYA+R++TASPYLNLQ M
Sbjct: 1   MLSASSPLTLPPLPVRPSPRDSTRVRFRPPQAFSSTATASSTAYASRQDTASPYLNLQTM 60

Query: 61  PSYTSLYDVLGLPTGASFQEIKSAYRRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTLS 120
           PS TSLY+VLG+PTGASFQEIKSAYRRLAR+ HPDVAAVDRKDSSA DFMKIHAAYSTLS
Sbjct: 61  PSCTSLYEVLGIPTGASFQEIKSAYRRLARLCHPDVAAVDRKDSSATDFMKIHAAYSTLS 120

Query: 121 DPEKRADYDRKLLRRCRPVASVRMASGFTGYTRRNWESDQCW 163
           DPEKRADYDRKLLRR RPVAS RMASGFTGYTRRNWE+DQCW
Sbjct: 121 DPEKRADYDRKLLRRYRPVASARMASGFTGYTRRNWETDQCW 162

[Close]

BLAST of Carg07952 vs. TAIR 10
Match: AT2G17880.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-30
Identity = 71/137 (51.82%), Postives = 89/137 (64.96%), Query Frame = 0


Query: 29  PPQAFSATATASST---AYATRENTASPYLNLQRMPSYTSLYDVLGLPTGASFQEIKSAY 88
           PP   S  + + ST   +Y   E+        QR  +  SLY++L +P G++ QEIKSAY
Sbjct: 29  PPSRISRISPSLSTTTASYTCAEDLPRLRQIPQRFSATASLYEILEIPVGSTSQEIKSAY 88

Query: 89  RRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTLSDPEKRADYDRKLLRRCRPVASVRMA 148
           RRLAR+ HPDVA   R +SSA+DFMKIHAAY TLSDPEKRA YDR+ L R RP     + 
Sbjct: 89  RRLARICHPDVARNSRDNSSADDFMKIHAAYCTLSDPEKRAVYDRRTLLRSRP-----LT 148

Query: 149 SGFTGYTRRNWESDQCW 163
           +G+  Y  RNWE+DQCW
Sbjct: 149 AGYGSYGGRNWETDQCW 160

[Close]

BLAST of Carg07952 vs. TAIR 10
Match: AT4G36040.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 129.4 bits (324), Expect = 2.6e-30
Identity = 77/159 (48.43%), Postives = 99/159 (62.26%), Query Frame = 0


Query: 18  SPREFTH--VRFRPPQA----------FSATATASSTAYATRENTASPYLNLQRMPSY-T 77
           SP  FTH  +   PP +           S    ++S +Y   E++   +   +R+ +   
Sbjct: 5   SPTSFTHPFLSSSPPLSPISPPSRTARISPPLVSASCSYTYTEDSPRLHQIPRRLTTVPA 64

Query: 78  SLYDVLGLPTGASFQEIKSAYRRLARVSHPDVAAVDR-KDSSANDFMKIHAAYSTLSDPE 137
           SLYDVL +P GA+ Q+IKSAYRRLAR+ HPDVA  DR   SSA++FMKIHAAY TLSDPE
Sbjct: 65  SLYDVLEVPLGATSQDIKSAYRRLARICHPDVAGTDRTSSSSADEFMKIHAAYCTLSDPE 124

Query: 138 KRADYDRKLLRRCRPVASVRMASGFTGYTRRNWESDQCW 163
           KR+ YDR++LRR RP+      SG   Y  RNWE+DQCW
Sbjct: 125 KRSVYDRRMLRRSRPLTV--GTSGLGSYVGRNWETDQCW 161

[Close]

BLAST of Carg07952 vs. TAIR 10
Match: AT3G13310.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 3.3e-17
Identity = 62/159 (38.99%), Postives = 81/159 (50.94%), Query Frame = 0


Query: 9   TLPPLPARFSPREFTHVRFRPPQAFSATAT----ASSTAYATRENTASPYLNLQRMPSYT 68
           TL     RFSP      + R  + +S TA     A S   + +   A P +        +
Sbjct: 4   TLVNSAGRFSPGNCILPQQRTARFYSGTARFPTGAPSFKASAQTLNAEPAVTESVRRRVS 63

Query: 69  SLYDVLGLPTGASFQEIKSAYRRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTLSDPEK 128
           SLY++L +   AS  EIK+AYR LA+V HPD +     +S   DFM+IH AY+TL+DP  
Sbjct: 64  SLYELLKVNETASLTEIKTAYRSLAKVYHPDAS-----ESDGRDFMEIHKAYATLADPTT 123

Query: 129 RADYDRKL-LRRCRPVASVRMASGFTGYTRRNWESDQCW 163
           RA YD  L + R R  A     SG    T R WE+DQCW
Sbjct: 124 RAIYDSTLRVPRRRVHAGAMGRSGRVYATTRRWETDQCW 157

[Close]

BLAST of Carg07952 vs. TAIR 10
Match: AT4G13830.1 (DNAJ-like 20 )

HSP 1 Score: 68.2 bits (165), Expect = 7.1e-12
Identity = 38/112 (33.93%), Postives = 60/112 (53.57%), Query Frame = 0


Query: 28  RPPQAFSATATASSTAYATRENTASPYLNLQ-------RMPSYTSLYDVLGLPTGASFQE 87
           +P  +   T+  ++ +Y TR   +S  +  +       +     S YD+LG+    +  E
Sbjct: 22  QPISSLQPTSIPTTISYPTRTRFSSTRIQSRLTHDDPVKQSEDLSFYDLLGVTESVTLPE 81

Query: 88  IKSAYRRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTLSDPEKRADYDRKL 133
           IK AY++LAR  HPDV+  DR +   + F+++  AY TLSDP +R  YDR L
Sbjct: 82  IKQAYKQLARKYHPDVSPPDRVEEYTDRFIRVQEAYETLSDPRRRVLYDRDL 133

[Close]

BLAST of Carg07952 vs. TAIR 10
Match: AT4G13830.2 (DNAJ-like 20 )

HSP 1 Score: 68.2 bits (165), Expect = 7.1e-12
Identity = 38/112 (33.93%), Postives = 60/112 (53.57%), Query Frame = 0


Query: 28  RPPQAFSATATASSTAYATRENTASPYLNLQ-------RMPSYTSLYDVLGLPTGASFQE 87
           +P  +   T+  ++ +Y TR   +S  +  +       +     S YD+LG+    +  E
Sbjct: 22  QPISSLQPTSIPTTISYPTRTRFSSTRIQSRLTHDDPVKQSEDLSFYDLLGVTESVTLPE 81

Query: 88  IKSAYRRLARVSHPDVAAVDRKDSSANDFMKIHAAYSTLSDPEKRADYDRKL 133
           IK AY++LAR  HPDV+  DR +   + F+++  AY TLSDP +R  YDR L
Sbjct: 82  IKQAYKQLARKYHPDVSPPDRVEEYTDRFIRVQEAYETLSDPRRRVLYDRDL 133

The following BLAST results are available for this feature:

BLAST of Carg07952 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926321.1	2.0e-85	100.00	chaperone protein dnaJ 11, chloroplastic [Cucurbita moschata] >KAG6594772.1 Chap...	[more]
XP_023003937.1	2.5e-83	97.53	chaperone protein dnaJ 11, chloroplastic [Cucurbita maxima]	[more]
XP_023517398.1	3.6e-82	97.55	chaperone protein dnaJ 11, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_038883841.1	2.1e-74	89.51	chaperone protein dnaJ 11, chloroplastic-like [Benincasa hispida]	[more]
KAG6603908.1	3.6e-74	89.51	Chaperone protein dnaJ 11, chloroplastic, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of Carg07952 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYB5	3.6e-29	48.43	Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ1...	[more]
B5YAR4	4.5e-11	50.00	Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 396...	[more]
Q9SDN0	1.0e-10	33.93	Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ2...	[more]
Q2HJ94	4.9e-10	49.25	DnaJ homolog subfamily A member 2 OS=Bos taurus OX=9913 GN=DNAJA2 PE=2 SV=1	[more]
O60884	4.9e-10	49.25	DnaJ homolog subfamily A member 2 OS=Homo sapiens OX=9606 GN=DNAJA2 PE=1 SV=1	[more]

BLAST of Carg07952 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EEJ6	9.8e-86	100.00	chaperone protein dnaJ 11, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1KP03	1.2e-83	97.53	chaperone protein dnaJ 11, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1IP70	2.3e-74	88.89	chaperone protein dnaJ 11, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A5A7SKL2	7.3e-73	87.04	Chaperone protein dnaJ 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3B225	7.3e-73	87.04	chaperone protein dnaJ 11, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485131...	[more]

BLAST of Carg07952 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17880.1	1.2e-30	51.82	Chaperone DnaJ-domain superfamily protein	[more]
AT4G36040.1	2.6e-30	48.43	Chaperone DnaJ-domain superfamily protein	[more]
AT3G13310.1	3.3e-17	38.99	Chaperone DnaJ-domain superfamily protein	[more]
AT4G13830.1	7.1e-12	33.93	DNAJ-like 20	[more]
AT4G13830.2	7.1e-12	33.93	DNAJ-like 20	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 104..124 score: 37.69 coord: 85..100 score: 45.37 coord: 67..85 score: 49.69
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 64..124 e-value: 1.7E-18 score: 77.4
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 66..129 e-value: 9.5E-21 score: 73.7
IPR001623	DnaJ domain	PROSITE	PS50076	DNAJ_2	coord: 65..132 score: 17.999121
IPR001623	DnaJ domain	CDD	cd06257	DnaJ	coord: 67..121 e-value: 6.32114E-17 score: 68.3409
IPR036869	Chaperone J-domain superfamily	GENE3D	1.10.287.110	DnaJ domain	coord: 55..145 e-value: 1.1E-21 score: 79.0
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	46565	Chaperone J-domain	coord: 60..141
None	No IPR available	PANTHER	PTHR44240	DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED	coord: 24..162
None	No IPR available	PANTHER	PTHR44240:SF20	SUBFAMILY NOT NAMED	coord: 24..162
IPR018253	DnaJ domain, conserved site	PROSITE	PS00636	DNAJ_1	coord: 109..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07952-RA	Carg07952-RA	mRNA