Carg07924 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07924
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pentatricopeptide repeat-containing protein
Location	Carg_Chr07: 1722282 .. 1723694 (+)
RNA-Seq Expression	Carg07924
Synteny	Carg07924

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAATTATCACCATCGTTTCGGTCAGCTATCTCCACCGCGATCGTTAACAAACCACCGCATCCTCCGGCGGCGCCATCGCTCTTGTCCGGTGAGATCCGCTCCTTGTCCAAGAAGCGTCCTCCGAAACATTCCCGGGAAAATCAGTCGGCGCAGAGCTCCGCCCACGGTGAAAAGCCTAAGCTCCCAACGCTGTTTAAATCGGCCAGTCTCGCAGATGCCAAGAAGCTCTACAGCTCCTTCATCAACACCACAAAAGCCCCTCTCGACGTTCGATTCTATAACTCTCTCCTTCAGTCTTACGCTTCAATCGCCTCACTCAATGACTCAATCTCTTTCCTCCGCCACATGTCCAAAGTTCAACCTTCCTTCTCGCCGGAACGATCGACCTTCCATGTATTACTCTCTACCTCCGGGAATGGTACTGATTCCTCTCTCGCCTCGGTTCGGCAAATCCTCAATTTCATGGTCACCCAGGGATTCAATCCTGACAGGGCAACAACTGATATTGCTGTGCGATCGCTTTGTTCGGCAGGTCTGATTGATGAAGCTGTTGAATTAGTAAGAGAATTTTCGCAAAAACACTCACCTCCTGATTCTTATACATACAATCATCTCGTTAAACAGCTTTGCAAATCCAGATCTCTGTCTACGGTTTATGATTTTATTGAAGAAATGCGTAGTAGTTGTGGTGCGACTCCCGATCTTGTTACGTATACAATCTTGATTGATAATGTGTGTAATGGCAAGAATCTCCGTGAGGCGACGCGGTTGGTAAGTGTGCTAGCTAAGGAGGGGTTTAAGCCGGATTGCTTTGTTTATAACATAATTATGAAGGGCTATTGTATGCTTGGCAGGGGCGTTGAGGCAATTGGAGTGTATAAGAAAATGAAGGAGGAGGGATTGGAGCCTGATGTTGTGACTTTTAATACATTGATTTTTGGGTTATCGAAGTCAGGGCGAGTTAAGGATGCAAGAAAGTTTCTGGACATTATGGCAGAGATGGGTCATTTCCCTGATGCTGTTACTTACACTTCATTGATGAATGGAATGTGTCGCCAGGGTGATGCTCTGGGGGCATTGTCGTTGCTTGAGGAGATGGAGGCAAAGGGATGCAGTCCCAACTCGTGCACATACAATACGTTGCTCCATGGGTTGTCAAAGTCTAGGCTTTTGGATAGAGGGATTGAATTGTATGGTTTGATGAAATCCAGTGATATGAAGCTTGAAGTTGCTTCCTATGCTACTTTTGTGAGGGCACTTTGCAGGAGTGGTAGAATTGCGGAGGCCTATGAAGTATTTGATTATGCAGTTGAGAGTAAAAGTTTGACGGATGTTACTGCATATTCAACGTTAGAGATTACATTGAAGGCTCTCAAGAAAGCAGGGGAGAAAGGCAATGTCATATAA

mRNA sequence

ATGGGGAAATTATCACCATCGTTTCGGTCAGCTATCTCCACCGCGATCGTTAACAAACCACCGCATCCTCCGGCGGCGCCATCGCTCTTGTCCGGTGAGATCCGCTCCTTGTCCAAGAAGCGTCCTCCGAAACATTCCCGGGAAAATCAGTCGGCGCAGAGCTCCGCCCACGGTGAAAAGCCTAAGCTCCCAACGCTGTTTAAATCGGCCAGTCTCGCAGATGCCAAGAAGCTCTACAGCTCCTTCATCAACACCACAAAAGCCCCTCTCGACGTTCGATTCTATAACTCTCTCCTTCAGTCTTACGCTTCAATCGCCTCACTCAATGACTCAATCTCTTTCCTCCGCCACATGTCCAAAGTTCAACCTTCCTTCTCGCCGGAACGATCGACCTTCCATGTATTACTCTCTACCTCCGGGAATGGTACTGATTCCTCTCTCGCCTCGGTTCGGCAAATCCTCAATTTCATGGTCACCCAGGGATTCAATCCTGACAGGGCAACAACTGATATTGCTGTGCGATCGCTTTGTTCGGCAGGTCTGATTGATGAAGCTGTTGAATTAGTAAGAGAATTTTCGCAAAAACACTCACCTCCTGATTCTTATACATACAATCATCTCGTTAAACAGCTTTGCAAATCCAGATCTCTGTCTACGGTTTATGATTTTATTGAAGAAATGCGTAGTAGTTGTGGTGCGACTCCCGATCTTGTTACGTATACAATCTTGATTGATAATGTGTGTAATGGCAAGAATCTCCGTGAGGCGACGCGGTTGGTAAGTGTGCTAGCTAAGGAGGGGTTTAAGCCGGATTGCTTTGTTTATAACATAATTATGAAGGGCTATTGTATGCTTGGCAGGGGCGTTGAGGCAATTGGAGTGTATAAGAAAATGAAGGAGGAGGGATTGGAGCCTGATGTTGTGACTTTTAATACATTGATTTTTGGGTTATCGAAGTCAGGGCGAGTTAAGGATGCAAGAAAGTTTCTGGACATTATGGCAGAGATGGGTCATTTCCCTGATGCTGTTACTTACACTTCATTGATGAATGGAATGTGTCGCCAGGGTGATGCTCTGGGGGCATTGTCGTTGCTTGAGGAGATGGAGGCAAAGGGATGCAGTCCCAACTCGTGCACATACAATACGTTGCTCCATGGGTTGTCAAAGTCTAGGCTTTTGGATAGAGGGATTGAATTGTATGGTTTGATGAAATCCAGTGATATGAAGCTTGAAGTTGCTTCCTATGCTACTTTTGTGAGGGCACTTTGCAGGAGTGGTAGAATTGCGGAGGCCTATGAAGTATTTGATTATGCAGTTGAGAGTAAAAGTTTGACGGATGTTACTGCATATTCAACGTTAGAGATTACATTGAAGGCTCTCAAGAAAGCAGGGGAGAAAGGCAATGTCATATAA

Coding sequence (CDS)

ATGGGGAAATTATCACCATCGTTTCGGTCAGCTATCTCCACCGCGATCGTTAACAAACCACCGCATCCTCCGGCGGCGCCATCGCTCTTGTCCGGTGAGATCCGCTCCTTGTCCAAGAAGCGTCCTCCGAAACATTCCCGGGAAAATCAGTCGGCGCAGAGCTCCGCCCACGGTGAAAAGCCTAAGCTCCCAACGCTGTTTAAATCGGCCAGTCTCGCAGATGCCAAGAAGCTCTACAGCTCCTTCATCAACACCACAAAAGCCCCTCTCGACGTTCGATTCTATAACTCTCTCCTTCAGTCTTACGCTTCAATCGCCTCACTCAATGACTCAATCTCTTTCCTCCGCCACATGTCCAAAGTTCAACCTTCCTTCTCGCCGGAACGATCGACCTTCCATGTATTACTCTCTACCTCCGGGAATGGTACTGATTCCTCTCTCGCCTCGGTTCGGCAAATCCTCAATTTCATGGTCACCCAGGGATTCAATCCTGACAGGGCAACAACTGATATTGCTGTGCGATCGCTTTGTTCGGCAGGTCTGATTGATGAAGCTGTTGAATTAGTAAGAGAATTTTCGCAAAAACACTCACCTCCTGATTCTTATACATACAATCATCTCGTTAAACAGCTTTGCAAATCCAGATCTCTGTCTACGGTTTATGATTTTATTGAAGAAATGCGTAGTAGTTGTGGTGCGACTCCCGATCTTGTTACGTATACAATCTTGATTGATAATGTGTGTAATGGCAAGAATCTCCGTGAGGCGACGCGGTTGGTAAGTGTGCTAGCTAAGGAGGGGTTTAAGCCGGATTGCTTTGTTTATAACATAATTATGAAGGGCTATTGTATGCTTGGCAGGGGCGTTGAGGCAATTGGAGTGTATAAGAAAATGAAGGAGGAGGGATTGGAGCCTGATGTTGTGACTTTTAATACATTGATTTTTGGGTTATCGAAGTCAGGGCGAGTTAAGGATGCAAGAAAGTTTCTGGACATTATGGCAGAGATGGGTCATTTCCCTGATGCTGTTACTTACACTTCATTGATGAATGGAATGTGTCGCCAGGGTGATGCTCTGGGGGCATTGTCGTTGCTTGAGGAGATGGAGGCAAAGGGATGCAGTCCCAACTCGTGCACATACAATACGTTGCTCCATGGGTTGTCAAAGTCTAGGCTTTTGGATAGAGGGATTGAATTGTATGGTTTGATGAAATCCAGTGATATGAAGCTTGAAGTTGCTTCCTATGCTACTTTTGTGAGGGCACTTTGCAGGAGTGGTAGAATTGCGGAGGCCTATGAAGTATTTGATTATGCAGTTGAGAGTAAAAGTTTGACGGATGTTACTGCATATTCAACGTTAGAGATTACATTGAAGGCTCTCAAGAAAGCAGGGGAGAAAGGCAATGTCATATAA

Protein sequence

MGKLSPSFRSAISTAIVNKPPHPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSAHGEKPKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASIASLNDSISFLRHMSKVQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPDRATTDIAVRSLCSAGLIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVTYTILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMKEEGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMCRQGDALGALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFVRALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGEKGNVI

Homology

[Close]

BLAST of Carg07924 vs. NCBI nr
Match: KAG7026711.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 915.6 bits (2365), Expect = 1.7e-262
Identity = 470/470 (100.00%), Postives = 470/470 (100.00%), Query Frame = 0


Query: 1   MGKLSPSFRSAISTAIVNKPPHPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSAHGEK 60
           MGKLSPSFRSAISTAIVNKPPHPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSAHGEK
Sbjct: 1   MGKLSPSFRSAISTAIVNKPPHPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSAHGEK 60

Query: 61  PKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASIASLNDSISFLRHMSK 120
           PKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASIASLNDSISFLRHMSK
Sbjct: 61  PKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASIASLNDSISFLRHMSK 120

Query: 121 VQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPDRATTDIAVRSLCSAG 180
           VQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPDRATTDIAVRSLCSAG
Sbjct: 121 VQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPDRATTDIAVRSLCSAG 180

Query: 181 LIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVTY 240
           LIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVTY
Sbjct: 181 LIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVTY 240

Query: 241 TILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMKE 300
           TILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMKE
Sbjct: 241 TILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMKE 300

Query: 301 EGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMCRQGDALG 360
           EGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMCRQGDALG
Sbjct: 301 EGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMCRQGDALG 360

Query: 361 ALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFVR 420
           ALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFVR
Sbjct: 361 ALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFVR 420

Query: 421 ALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGEKGNVI 471
           ALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGEKGNVI
Sbjct: 421 ALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGEKGNVI 470

[Close]

BLAST of Carg07924 vs. NCBI nr
Match: XP_022926982.1 (pentatricopeptide repeat-containing protein At2g17670 [Cucurbita moschata] >XP_022926983.1 pentatricopeptide repeat-containing protein At2g17670 [Cucurbita moschata] >XP_022926984.1 pentatricopeptide repeat-containing protein At2g17670 [Cucurbita moschata])

HSP 1 Score: 911.4 bits (2354), Expect = 3.3e-261
Identity = 467/470 (99.36%), Postives = 469/470 (99.79%), Query Frame = 0


Query: 1   MGKLSPSFRSAISTAIVNKPPHPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSAHGEK 60
           MGKLSPSFRSAIST IVNKPPHPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSAHGEK
Sbjct: 1   MGKLSPSFRSAISTPIVNKPPHPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSAHGEK 60

Query: 61  PKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASIASLNDSISFLRHMSK 120
           PKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASIASLNDSISFLRHMSK
Sbjct: 61  PKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASIASLNDSISFLRHMSK 120

Query: 121 VQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPDRATTDIAVRSLCSAG 180
           VQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPD+ATTDIAVRSLCSAG
Sbjct: 121 VQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPDKATTDIAVRSLCSAG 180

Query: 181 LIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVTY 240
           LIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVTY
Sbjct: 181 LIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVTY 240

Query: 241 TILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMKE 300
           TILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMKE
Sbjct: 241 TILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMKE 300

Query: 301 EGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMCRQGDALG 360
           EGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMCR+GDALG
Sbjct: 301 EGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMCREGDALG 360

Query: 361 ALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFVR 420
           ALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFVR
Sbjct: 361 ALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFVR 420

Query: 421 ALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGEKGNVI 471
           ALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGEKGNVI
Sbjct: 421 ALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGEKGNVI 470

[Close]

BLAST of Carg07924 vs. NCBI nr
Match: KAG6594740.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 906.7 bits (2342), Expect = 8.1e-260
Identity = 466/470 (99.15%), Postives = 468/470 (99.57%), Query Frame = 0


Query: 1   MGKLSPSFRSAISTAIVNKPPHPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSAHGEK 60
           MGKLSPSFRSAISTAIVNKPPHPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSAHGEK
Sbjct: 1   MGKLSPSFRSAISTAIVNKPPHPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSAHGEK 60

Query: 61  PKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASIASLNDSISFLRHMSK 120
           PKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASIASLNDSISFLRHMSK
Sbjct: 61  PKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASIASLNDSISFLRHMSK 120

Query: 121 VQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPDRATTDIAVRSLCSAG 180
           VQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPD+ATTDIAVRSLCSAG
Sbjct: 121 VQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPDKATTDIAVRSLCSAG 180

Query: 181 LIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVTY 240
           LIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSS GATPDLVTY
Sbjct: 181 LIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSSGGATPDLVTY 240

Query: 241 TILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMKE 300
           TILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMKE
Sbjct: 241 TILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMKE 300

Query: 301 EGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMCRQGDALG 360
           EGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMC +GDALG
Sbjct: 301 EGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMCHEGDALG 360

Query: 361 ALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFVR 420
           ALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFVR
Sbjct: 361 ALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFVR 420

Query: 421 ALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGEKGNVI 471
           ALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGEKGNVI
Sbjct: 421 ALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGEKGNVI 470

[Close]

BLAST of Carg07924 vs. NCBI nr
Match: XP_023518399.1 (pentatricopeptide repeat-containing protein At2g17670-like [Cucurbita pepo subsp. pepo] >XP_023518400.1 pentatricopeptide repeat-containing protein At2g17670-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 899.8 bits (2324), Expect = 9.8e-258
Identity = 461/470 (98.09%), Postives = 465/470 (98.94%), Query Frame = 0


Query: 1   MGKLSPSFRSAISTAIVNKPPHPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSAHGEK 60
           MGKLSPSFRSAISTAIVNKPPHPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSS HGEK
Sbjct: 1   MGKLSPSFRSAISTAIVNKPPHPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSGHGEK 60

Query: 61  PKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASIASLNDSISFLRHMSK 120
           PKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLL+SYASIASLNDSISFLRHMSK
Sbjct: 61  PKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLRSYASIASLNDSISFLRHMSK 120

Query: 121 VQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPDRATTDIAVRSLCSAG 180
           VQPSFSPERSTFHVLLSTSG GTDSSLASVRQILNFMVTQGFNPD+ATTDIAVRSLCSAG
Sbjct: 121 VQPSFSPERSTFHVLLSTSGTGTDSSLASVRQILNFMVTQGFNPDKATTDIAVRSLCSAG 180

Query: 181 LIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVTY 240
           LIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMR SCGATPDLVTY
Sbjct: 181 LIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRISCGATPDLVTY 240

Query: 241 TILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMKE 300
           TILIDNVCNGKNLRE TRLVSVLAKEGFKPDCF+YNIIMKGYCMLGRGVEAIGVYKKMKE
Sbjct: 241 TILIDNVCNGKNLREVTRLVSVLAKEGFKPDCFLYNIIMKGYCMLGRGVEAIGVYKKMKE 300

Query: 301 EGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMCRQGDALG 360
           EGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMC +GDALG
Sbjct: 301 EGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMCCEGDALG 360

Query: 361 ALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFVR 420
           ALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFVR
Sbjct: 361 ALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFVR 420

Query: 421 ALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGEKGNVI 471
           ALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGEKGNVI
Sbjct: 421 ALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGEKGNVI 470

[Close]

BLAST of Carg07924 vs. NCBI nr
Match: XP_023003882.1 (pentatricopeptide repeat-containing protein At2g17670-like [Cucurbita maxima] >XP_023003883.1 pentatricopeptide repeat-containing protein At2g17670-like [Cucurbita maxima] >XP_023003884.1 pentatricopeptide repeat-containing protein At2g17670-like [Cucurbita maxima] >XP_023003885.1 pentatricopeptide repeat-containing protein At2g17670-like [Cucurbita maxima])

HSP 1 Score: 869.4 bits (2245), Expect = 1.4e-248
Identity = 444/470 (94.47%), Postives = 454/470 (96.60%), Query Frame = 0


Query: 1   MGKLSPSFRSAISTAIVNKPPHPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSAHGEK 60
           MGKLSPSFRSAISTAIVNKPP+PPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSS HGEK
Sbjct: 1   MGKLSPSFRSAISTAIVNKPPNPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSGHGEK 60

Query: 61  PKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASIASLNDSISFLRHMSK 120
           PKLPTLFKSASLA+AKKLYSSFINTTKAPLDVRFYNSLL SY SIASLNDSISFLRHMSK
Sbjct: 61  PKLPTLFKSASLAEAKKLYSSFINTTKAPLDVRFYNSLLHSYTSIASLNDSISFLRHMSK 120

Query: 121 VQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPDRATTDIAVRSLCSAG 180
           VQP+FSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVT GFNPD+AT DIAVRSLCSAG
Sbjct: 121 VQPTFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTHGFNPDKATIDIAVRSLCSAG 180

Query: 181 LIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVTY 240
           LIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVY FI EMRSSCGA PDLVTY
Sbjct: 181 LIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYGFIHEMRSSCGANPDLVTY 240

Query: 241 TILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMKE 300
           TILIDNVCNGKNLREATRLVSVLA+EGFKPDCFVYN IMKGYCMLGRG EAIGVYKKMKE
Sbjct: 241 TILIDNVCNGKNLREATRLVSVLAEEGFKPDCFVYNTIMKGYCMLGRGSEAIGVYKKMKE 300

Query: 301 EGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMCRQGDALG 360
           EGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPD VTYTSLMNGMCR+GDALG
Sbjct: 301 EGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDVVTYTSLMNGMCREGDALG 360

Query: 361 ALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFVR 420
           ALSLLEEMEAKGCSPNSC+YNTLLHGLSKSRLLD+GIELYGLMKS DMKLE ASYATFVR
Sbjct: 361 ALSLLEEMEAKGCSPNSCSYNTLLHGLSKSRLLDKGIELYGLMKSGDMKLEAASYATFVR 420

Query: 421 ALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGEKGNVI 471
           ALCRSGRIAEAYEVFDYAVES+SLTDV AYSTLE TLKALKKA E+GNVI
Sbjct: 421 ALCRSGRIAEAYEVFDYAVESRSLTDVAAYSTLETTLKALKKAREQGNVI 470

[Close]

BLAST of Carg07924 vs. ExPASy Swiss-Prot
Match: Q84J71 (Pentatricopeptide repeat-containing protein At2g17670 OS=Arabidopsis thaliana OX=3702 GN=At2g17670 PE=1 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 5.8e-152
Identity = 272/470 (57.87%), Postives = 350/470 (74.47%), Query Frame = 0


Query: 1   MGKLSPSFRSAISTAIVNK-PPHPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSAHGE 60
           MGK+  SFRS  +  +V K  P PPA P           + R        +  Q++    
Sbjct: 1   MGKVPSSFRSMPANLLVRKTTPSPPAPPRDF--------RNRTAVGGDSAKLPQNTQAPR 60

Query: 61  KPKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASIASLNDSISFLRHMS 120
           +P L   FKS +L+DAK L++S   T++ PLD++F+NS+LQSY SIA +ND++   +H+ 
Sbjct: 61  EPSLRNPFKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHIL 120

Query: 121 KVQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPDRATTDIAVRSLCSA 180
           K QP+F P RSTF +LLS +    DSS+++V ++LN MV  G  PD+ TTDIAVRSLC  
Sbjct: 121 KSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCET 180

Query: 181 GLIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVT 240
           G +DEA +L++E ++KHSPPD+YTYN L+K LCK + L  VY+F++EMR      PDLV+
Sbjct: 181 GRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVS 240

Query: 241 YTILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMK 300
           +TILIDNVCN KNLREA  LVS L   GFKPDCF+YN IMKG+C L +G EA+GVYKKMK
Sbjct: 241 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 300

Query: 301 EEGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMCRQGDAL 360
           EEG+EPD +T+NTLIFGLSK+GRV++AR +L  M + G+ PD  TYTSLMNGMCR+G++L
Sbjct: 301 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESL 360

Query: 361 GALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFV 420
           GALSLLEEMEA+GC+PN CTYNTLLHGL K+RL+D+G+ELY +MKSS +KLE   YAT V
Sbjct: 361 GALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLV 420

Query: 421 RALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGEKGNV 470
           R+L +SG++AEAYEVFDYAV+SKSL+D +AYSTLE TLK LKKA E+G V
Sbjct: 421 RSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTLKWLKKAKEQGLV 462

[Close]

BLAST of Carg07924 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 3.0e-47
Identity = 132/425 (31.06%), Postives = 201/425 (47.29%), Query Frame = 0


Query: 46  SRENQSAQSSAHGEKPKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASI 105
           S  ++   S  +G   K  TL    S ++    YSS +N++ A  DV   N L Q   + 
Sbjct: 58  SAASKVESSGLNGRAQKFETLSSGYSNSNGNGHYSS-VNSSFALEDVESNNHLRQMVRT- 117

Query: 106 ASLNDSISFLRHMSKVQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPD 165
             L +   FL +M  V     P+      L+   G           +IL  +   G  PD
Sbjct: 118 GELEEGFKFLENM--VYHGNVPDIIPCTTLI--RGFCRLGKTRKAAKILEILEGSGAVPD 177

Query: 166 RATTDIAVRSLCSAGLIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIE 225
             T ++ +   C AG I+ A+ ++   S     PD  TYN +++ LC S  L    + ++
Sbjct: 178 VITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLD 237

Query: 226 EMRSSCGATPDLVTYTILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCML 285
            M       PD++TYTILI+  C    +  A +L+  +   G  PD   YN+++ G C  
Sbjct: 238 RMLQR-DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 297

Query: 286 GRGVEAIGVYKKMKEEGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTY 345
           GR  EAI     M   G +P+V+T N ++  +  +GR  DA K L  M   G  P  VT+
Sbjct: 298 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 357

Query: 346 TSLMNGMCRQGDALGALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKS 405
             L+N +CR+G    A+ +LE+M   GC PNS +YN LLHG  K + +DR IE    M S
Sbjct: 358 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 417

Query: 406 SDMKLEVASYATFVRALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGE 465
                ++ +Y T + ALC+ G++ +A E+ +  + SK  + V    T    +  L KAG+
Sbjct: 418 RGCYPDIVTYNTMLTALCKDGKVEDAVEILN-QLSSKGCSPVLI--TYNTVIDGLAKAGK 469

Query: 466 KGNVI 471
            G  I
Sbjct: 478 TGKAI 469

[Close]

BLAST of Carg07924 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.6e-45
Identity = 96/288 (33.33%), Postives = 155/288 (53.82%), Query Frame = 0


Query: 147 LASVRQILNFMVTQGFNPDRATTDIAVRSLCSAGLIDEAVELVREFSQKHSPPDSYTYNH 206
           +     +L  M  +G+ PD  +    V   C  G +D+  +L+    +K   P+SY Y  
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321

Query: 207 LVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVTYTILIDNVCNGKNLREATRLVSVLAKE 266
           ++  LC+   L+   +   EM    G  PD V YT LID  C   ++R A++    +   
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 381

Query: 267 GFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMKEEGLEPDVVTFNTLIFGLSKSGRVKDA 326
              PD   Y  I+ G+C +G  VEA  ++ +M  +GLEPD VTF  LI G  K+G +KDA
Sbjct: 382 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 441

Query: 327 RKFLDIMAEMGHFPDAVTYTSLMNGMCRQGDALGALSLLEEMEAKGCSPNSCTYNTLLHG 386
            +  + M + G  P+ VTYT+L++G+C++GD   A  LL EM   G  PN  TYN++++G
Sbjct: 442 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 501

Query: 387 LSKSRLLDRGIELYGLMKSSDMKLEVASYATFVRALCRSGRIAEAYEV 435
           L KS  ++  ++L G  +++ +  +  +Y T + A C+SG + +A E+
Sbjct: 502 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548

[Close]

BLAST of Carg07924 vs. ExPASy Swiss-Prot
Match: Q9ASZ8 (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX=3702 GN=At1g12620 PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.3e-44
Identity = 99/343 (28.86%), Postives = 176/343 (51.31%), Query Frame = 0


Query: 111 SISFLRHMSKVQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPDRATTD 170
           S++F      ++  + P+  TF  L+  +G   +  ++   ++++ MV  G  P   T +
Sbjct: 124 SLAFSAMGKIIKLGYEPDTVTFSTLI--NGLCLEGRVSEALELVDRMVEMGHKPTLITLN 183

Query: 171 IAVRSLCSAGLIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSS 230
             V  LC  G + +AV L+    +    P+  TY  ++K +CKS   +   + + +M   
Sbjct: 184 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 243

Query: 231 CGATPDLVTYTILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVE 290
                D V Y+I+ID +C   +L  A  L + +  +GFK D  +Y  +++G+C  GR  +
Sbjct: 244 -KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 303

Query: 291 AIGVYKKMKEEGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMN 350
              + + M +  + PDVV F+ LI    K G++++A +    M + G  PD VTYTSL++
Sbjct: 304 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID 363

Query: 351 GMCRQGDALGALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKL 410
           G C++     A  +L+ M +KGC PN  T+N L++G  K+ L+D G+EL+  M    +  
Sbjct: 364 GFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA 423

Query: 411 EVASYATFVRALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTL 454
           +  +Y T ++  C  G++  A E+F   V  +   D+ +Y  L
Sbjct: 424 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKIL 463

[Close]

BLAST of Carg07924 vs. ExPASy Swiss-Prot
Match: Q3ECK2 (Pentatricopeptide repeat-containing protein At1g62680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62680 PE=2 SV=2)

HSP 1 Score: 181.4 bits (459), Expect = 2.3e-44
Identity = 109/401 (27.18%), Postives = 201/401 (50.12%), Query Frame = 0


Query: 65  TLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASIASLNDSISFLRHMSKVQPS 124
           T  +   L DA  L+S  + +   P  V F N LL +   +   +  IS  + M  +   
Sbjct: 59  TRLRDIKLNDAIDLFSDMVKSRPFPSIVDF-NRLLSAIVKLKKYDVVISLGKKMEVL--G 118

Query: 125 FSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPDRATTDIAVRSLCSAGLIDE 184
              +  TF+++++        SLA    IL  M+  G+ PDR T    V   C    + +
Sbjct: 119 IRNDLYTFNIVINCFCCCFQVSLA--LSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 178

Query: 185 AVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVTYTILI 244
           AV LV +  +    PD   YN ++  LCK++ ++  +DF +E+    G  P++VTYT L+
Sbjct: 179 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK-GIRPNVVTYTALV 238

Query: 245 DNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMKEEGLE 304
           + +CN     +A RL+S + K+   P+   Y+ ++  +   G+ +EA  ++++M    ++
Sbjct: 239 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID 298

Query: 305 PDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMCRQGDALGALSL 364
           PD+VT+++LI GL    R+ +A +  D+M   G   D V+Y +L+NG C+       + L
Sbjct: 299 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 358

Query: 365 LEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFVRALCR 424
             EM  +G   N+ TYNTL+ G  ++  +D+  E +  M    +  ++ +Y   +  LC 
Sbjct: 359 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 418

Query: 425 SGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGE 466
           +G + +A  +F+   + +   D+  Y+T+   ++ + K G+
Sbjct: 419 NGELEKALVIFEDMQKREMDLDIVTYTTV---IRGMCKTGK 450

[Close]

BLAST of Carg07924 vs. ExPASy TrEMBL
Match: A0A6J1EGP9 (pentatricopeptide repeat-containing protein At2g17670 OS=Cucurbita moschata OX=3662 GN=LOC111433937 PE=4 SV=1)

HSP 1 Score: 911.4 bits (2354), Expect = 1.6e-261
Identity = 467/470 (99.36%), Postives = 469/470 (99.79%), Query Frame = 0


Query: 1   MGKLSPSFRSAISTAIVNKPPHPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSAHGEK 60
           MGKLSPSFRSAIST IVNKPPHPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSAHGEK
Sbjct: 1   MGKLSPSFRSAISTPIVNKPPHPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSAHGEK 60

Query: 61  PKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASIASLNDSISFLRHMSK 120
           PKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASIASLNDSISFLRHMSK
Sbjct: 61  PKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASIASLNDSISFLRHMSK 120

Query: 121 VQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPDRATTDIAVRSLCSAG 180
           VQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPD+ATTDIAVRSLCSAG
Sbjct: 121 VQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPDKATTDIAVRSLCSAG 180

Query: 181 LIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVTY 240
           LIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVTY
Sbjct: 181 LIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVTY 240

Query: 241 TILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMKE 300
           TILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMKE
Sbjct: 241 TILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMKE 300

Query: 301 EGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMCRQGDALG 360
           EGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMCR+GDALG
Sbjct: 301 EGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMCREGDALG 360

Query: 361 ALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFVR 420
           ALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFVR
Sbjct: 361 ALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFVR 420

Query: 421 ALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGEKGNVI 471
           ALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGEKGNVI
Sbjct: 421 ALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGEKGNVI 470

[Close]

BLAST of Carg07924 vs. ExPASy TrEMBL
Match: A0A6J1KT16 (pentatricopeptide repeat-containing protein At2g17670-like OS=Cucurbita maxima OX=3661 GN=LOC111497342 PE=4 SV=1)

HSP 1 Score: 869.4 bits (2245), Expect = 6.9e-249
Identity = 444/470 (94.47%), Postives = 454/470 (96.60%), Query Frame = 0


Query: 1   MGKLSPSFRSAISTAIVNKPPHPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSAHGEK 60
           MGKLSPSFRSAISTAIVNKPP+PPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSS HGEK
Sbjct: 1   MGKLSPSFRSAISTAIVNKPPNPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSGHGEK 60

Query: 61  PKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASIASLNDSISFLRHMSK 120
           PKLPTLFKSASLA+AKKLYSSFINTTKAPLDVRFYNSLL SY SIASLNDSISFLRHMSK
Sbjct: 61  PKLPTLFKSASLAEAKKLYSSFINTTKAPLDVRFYNSLLHSYTSIASLNDSISFLRHMSK 120

Query: 121 VQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPDRATTDIAVRSLCSAG 180
           VQP+FSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVT GFNPD+AT DIAVRSLCSAG
Sbjct: 121 VQPTFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTHGFNPDKATIDIAVRSLCSAG 180

Query: 181 LIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVTY 240
           LIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVY FI EMRSSCGA PDLVTY
Sbjct: 181 LIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYGFIHEMRSSCGANPDLVTY 240

Query: 241 TILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMKE 300
           TILIDNVCNGKNLREATRLVSVLA+EGFKPDCFVYN IMKGYCMLGRG EAIGVYKKMKE
Sbjct: 241 TILIDNVCNGKNLREATRLVSVLAEEGFKPDCFVYNTIMKGYCMLGRGSEAIGVYKKMKE 300

Query: 301 EGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMCRQGDALG 360
           EGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPD VTYTSLMNGMCR+GDALG
Sbjct: 301 EGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDVVTYTSLMNGMCREGDALG 360

Query: 361 ALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFVR 420
           ALSLLEEMEAKGCSPNSC+YNTLLHGLSKSRLLD+GIELYGLMKS DMKLE ASYATFVR
Sbjct: 361 ALSLLEEMEAKGCSPNSCSYNTLLHGLSKSRLLDKGIELYGLMKSGDMKLEAASYATFVR 420

Query: 421 ALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGEKGNVI 471
           ALCRSGRIAEAYEVFDYAVES+SLTDV AYSTLE TLKALKKA E+GNVI
Sbjct: 421 ALCRSGRIAEAYEVFDYAVESRSLTDVAAYSTLETTLKALKKAREQGNVI 470

[Close]

BLAST of Carg07924 vs. ExPASy TrEMBL
Match: A0A6J1BW58 (pentatricopeptide repeat-containing protein At2g17670 OS=Momordica charantia OX=3673 GN=LOC111005895 PE=4 SV=1)

HSP 1 Score: 785.4 bits (2027), Expect = 1.3e-223
Identity = 407/471 (86.41%), Postives = 434/471 (92.14%), Query Frame = 0


Query: 1   MGKLSPSFRSAISTAIVNKPPHP-PAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSAHGE 60
           MGKLSPSFRSAIST I+NKPP P  AAP LLSGE RSLSKK PPK SR+ QSAQSS   E
Sbjct: 1   MGKLSPSFRSAISTTILNKPPQPLAAAPPLLSGEPRSLSKKLPPKPSRKIQSAQSSGPLE 60

Query: 61  KPKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASIASLNDSISFLRHMS 120
           KPK  TLFKS+SLADAKKLYSSFI TT+APLD+RFYNSLLQSYASIA+LNDSISFLR+MS
Sbjct: 61  KPKTATLFKSSSLADAKKLYSSFIATTRAPLDLRFYNSLLQSYASIATLNDSISFLRYMS 120

Query: 121 KVQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPDRATTDIAVRSLCSA 180
           KVQPSFSP+RSTFHVLLSTSGNG+ SSLASV+QILNFMV+ GFNPD+ TTDIAVRSLCSA
Sbjct: 121 KVQPSFSPDRSTFHVLLSTSGNGSGSSLASVQQILNFMVSNGFNPDKVTTDIAVRSLCSA 180

Query: 181 GLIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVT 240
           GLIDEAVELV+E S+K SPPDS+TYNHLVKQLCKSR+LSTVY FI+EMRSS G+ PDLVT
Sbjct: 181 GLIDEAVELVKELSRKQSPPDSFTYNHLVKQLCKSRALSTVYGFIDEMRSSFGSKPDLVT 240

Query: 241 YTILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMK 300
           YTILIDNVCNGKNLREATRL+SVL +EGFKPDCFVYN IMKGYCMLGRG EAIGVYKKMK
Sbjct: 241 YTILIDNVCNGKNLREATRLISVLGEEGFKPDCFVYNTIMKGYCMLGRGSEAIGVYKKMK 300

Query: 301 EEGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMCRQGDAL 360
           EEGLEPDVVTFNTLIFGLSKSGRVK+ARKFLDIMAEMGHFPDAVTYTSLMNGMCR+GDAL
Sbjct: 301 EEGLEPDVVTFNTLIFGLSKSGRVKEARKFLDIMAEMGHFPDAVTYTSLMNGMCREGDAL 360

Query: 361 GALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFV 420
           GALSLLE MEAKGCSPNSCTYNTLLHGL+KSRLLDRGIELYGLMKS  MKLE ASYAT V
Sbjct: 361 GALSLLEVMEAKGCSPNSCTYNTLLHGLAKSRLLDRGIELYGLMKSGGMKLETASYATLV 420

Query: 421 RALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGEKGNVI 471
           RALCRS RIAEAYEVFDYAVESKS+TDV AYSTLE TLK+LKK  E+G+ I
Sbjct: 421 RALCRSDRIAEAYEVFDYAVESKSMTDVAAYSTLESTLKSLKKVREQGHAI 471

[Close]

BLAST of Carg07924 vs. ExPASy TrEMBL
Match: A0A0A0KHF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507510 PE=4 SV=1)

HSP 1 Score: 752.7 bits (1942), Expect = 9.4e-214
Identity = 384/471 (81.53%), Postives = 421/471 (89.38%), Query Frame = 0


Query: 1   MGKLSPSFRSAIST-AIVNKPPHPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSAHGE 60
           MGKLSPSFRS +S+  ++NKPPH PAAP L        SKK  PK SR+  S QSS H E
Sbjct: 1   MGKLSPSFRSILSSNTVINKPPHSPAAPPL-------SSKKATPKPSRKTPSGQSSGHPE 60

Query: 61  KPKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASIASLNDSISFLRHMS 120
           KPKLPT+FKSASLADAKKLYSSF++ TKAP ++R +NSLLQSYASIA+LNDSISFLRHMS
Sbjct: 61  KPKLPTVFKSASLADAKKLYSSFVSATKAPFNLRVHNSLLQSYASIATLNDSISFLRHMS 120

Query: 121 KVQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPDRATTDIAVRSLCSA 180
           KVQPSFSP++STFH+LLSTSGN  DS+LASV+QILNFMVT GFNPD+ T D+AVRSLCS 
Sbjct: 121 KVQPSFSPDQSTFHILLSTSGNRPDSTLASVQQILNFMVTNGFNPDKVTADLAVRSLCSV 180

Query: 181 GLIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVT 240
           GL+DEAVELV+E SQKH+PPD YTYNHLVKQLCKSR+LSTVY+FI EMRSSCGA PDLVT
Sbjct: 181 GLVDEAVELVKELSQKHTPPDIYTYNHLVKQLCKSRALSTVYNFIVEMRSSCGAKPDLVT 240

Query: 241 YTILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMK 300
           YTILIDNVCN  NLREA RLVS+L KEGFKPDCFVYN IMKGYCM+GRG EAIGVYKKMK
Sbjct: 241 YTILIDNVCNSNNLREAMRLVSLLYKEGFKPDCFVYNTIMKGYCMVGRGAEAIGVYKKMK 300

Query: 301 EEGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMCRQGDAL 360
           E GLEPDVVTFNTLIFGLSKSGRVK+AR FLDIMAEMGHFPDAVTYTSLMNGMCR+G+AL
Sbjct: 301 EVGLEPDVVTFNTLIFGLSKSGRVKEARNFLDIMAEMGHFPDAVTYTSLMNGMCREGNAL 360

Query: 361 GALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFV 420
           GALSLL+EMEAKGC+PNSCTYNTLLHGLSKSRLLDRGIELYGLMKS DMKLE ASY+TFV
Sbjct: 361 GALSLLKEMEAKGCNPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSCDMKLETASYSTFV 420

Query: 421 RALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGEKGNVI 471
           RALCRSGRIAEAYEVFDYAVESKSLTDV+AY +LE TLK+LK A E+ + I
Sbjct: 421 RALCRSGRIAEAYEVFDYAVESKSLTDVSAYLSLESTLKSLKNAREQAHAI 464

[Close]

BLAST of Carg07924 vs. ExPASy TrEMBL
Match: A0A1S4DT84 (pentatricopeptide repeat-containing protein At2g17670 OS=Cucumis melo OX=3656 GN=LOC103485180 PE=4 SV=1)

HSP 1 Score: 732.3 bits (1889), Expect = 1.3e-207
Identity = 377/470 (80.21%), Postives = 416/470 (88.51%), Query Frame = 0


Query: 1   MGKLSPSFRSAISTAIVNKPPHPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSAHGEK 60
           MGKLSPSFRS +ST++++KP   PAAP L        SKK  PK SR+  S QSS H  K
Sbjct: 1   MGKLSPSFRSILSTSVIHKPTLSPAAPPL-------SSKKPTPKPSRKTPSGQSSGHPVK 60

Query: 61  PKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASIASLNDSISFLRHMSK 120
           PKLPT+FKSASLADAKKLYSSFI+T+KAP ++R +NSLLQSYASIA+LNDSISFLRHMSK
Sbjct: 61  PKLPTVFKSASLADAKKLYSSFISTSKAPFNLRVHNSLLQSYASIATLNDSISFLRHMSK 120

Query: 121 VQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPDRATTDIAVRSLCSAG 180
           VQPSFSP++STFH+LLSTS N  DSSLASVR+ILNFMVT GFNPD+ T D+AVRSLCS G
Sbjct: 121 VQPSFSPDQSTFHILLSTSENRPDSSLASVRKILNFMVTNGFNPDKVTADLAVRSLCSVG 180

Query: 181 LIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVTY 240
           L+DEAVELV+E SQKH+P D YTYNHLVKQLCKSR+LSTVY+FI EMRSSCGA PDLVTY
Sbjct: 181 LVDEAVELVKELSQKHTPLDIYTYNHLVKQLCKSRALSTVYNFIVEMRSSCGAKPDLVTY 240

Query: 241 TILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMKE 300
           TILIDNVCN  NLREA RLVS+L KEGFKPDCFVYN IMKGYCM+GRG EAIGVYKKMKE
Sbjct: 241 TILIDNVCNSNNLREAMRLVSLLYKEGFKPDCFVYNTIMKGYCMVGRGAEAIGVYKKMKE 300

Query: 301 EGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMCRQGDALG 360
            GLEPD+VTFNTLIFGLSKSGRVK+A  FLDIMAEMGHFPD VTYTSLMNGMCR+G+ALG
Sbjct: 301 VGLEPDLVTFNTLIFGLSKSGRVKEAIDFLDIMAEMGHFPDTVTYTSLMNGMCREGNALG 360

Query: 361 ALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFVR 420
           ALSLL+EMEAKGC+PNS TYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLE ASY+TFVR
Sbjct: 361 ALSLLKEMEAKGCNPNSFTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLESASYSTFVR 420

Query: 421 ALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGEKGNVI 471
           ALCRSGRIAEAYEVFDYAVESKSLTDV+AY +LE TLK+LK A E+ + +
Sbjct: 421 ALCRSGRIAEAYEVFDYAVESKSLTDVSAYLSLESTLKSLKNAREQAHAV 463

[Close]

BLAST of Carg07924 vs. TAIR 10
Match: AT2G17670.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 538.9 bits (1387), Expect = 4.1e-153
Identity = 272/470 (57.87%), Postives = 350/470 (74.47%), Query Frame = 0


Query: 1   MGKLSPSFRSAISTAIVNK-PPHPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSAHGE 60
           MGK+  SFRS  +  +V K  P PPA P           + R        +  Q++    
Sbjct: 1   MGKVPSSFRSMPANLLVRKTTPSPPAPPRDF--------RNRTAVGGDSAKLPQNTQAPR 60

Query: 61  KPKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASIASLNDSISFLRHMS 120
           +P L   FKS +L+DAK L++S   T++ PLD++F+NS+LQSY SIA +ND++   +H+ 
Sbjct: 61  EPSLRNPFKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHIL 120

Query: 121 KVQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPDRATTDIAVRSLCSA 180
           K QP+F P RSTF +LLS +    DSS+++V ++LN MV  G  PD+ TTDIAVRSLC  
Sbjct: 121 KSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCET 180

Query: 181 GLIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVT 240
           G +DEA +L++E ++KHSPPD+YTYN L+K LCK + L  VY+F++EMR      PDLV+
Sbjct: 181 GRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVS 240

Query: 241 YTILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMK 300
           +TILIDNVCN KNLREA  LVS L   GFKPDCF+YN IMKG+C L +G EA+GVYKKMK
Sbjct: 241 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 300

Query: 301 EEGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMCRQGDAL 360
           EEG+EPD +T+NTLIFGLSK+GRV++AR +L  M + G+ PD  TYTSLMNGMCR+G++L
Sbjct: 301 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESL 360

Query: 361 GALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSSDMKLEVASYATFV 420
           GALSLLEEMEA+GC+PN CTYNTLLHGL K+RL+D+G+ELY +MKSS +KLE   YAT V
Sbjct: 361 GALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLV 420

Query: 421 RALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGEKGNV 470
           R+L +SG++AEAYEVFDYAV+SKSL+D +AYSTLE TLK LKKA E+G V
Sbjct: 421 RSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTLKWLKKAKEQGLV 462

[Close]

BLAST of Carg07924 vs. TAIR 10
Match: AT2G17670.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 379.8 bits (974), Expect = 3.2e-105
Identity = 191/357 (53.50%), Postives = 251/357 (70.31%), Query Frame = 0


Query: 1   MGKLSPSFRSAISTAIVNK-PPHPPAAPSLLSGEIRSLSKKRPPKHSRENQSAQSSAHGE 60
           MGK+  SFRS  +  +V K  P PPA P           + R        +  Q++    
Sbjct: 1   MGKVPSSFRSMPANLLVRKTTPSPPAPPRDF--------RNRTAVGGDSAKLPQNTQAPR 60

Query: 61  KPKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASIASLNDSISFLRHMS 120
           +P L   FKS +L+DAK L++S   T++ PLD++F+NS+LQSY SIA +ND++   +H+ 
Sbjct: 61  EPSLRNPFKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHIL 120

Query: 121 KVQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPDRATTDIAVRSLCSA 180
           K QP+F P RSTF +LLS +    DSS+++V ++LN MV  G  PD+ TTDIAVRSLC  
Sbjct: 121 KSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCET 180

Query: 181 GLIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVT 240
           G +DEA +L++E ++KHSPPD+YTYN L+K LCK + L  VY+F++EMR      PDLV+
Sbjct: 181 GRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVS 240

Query: 241 YTILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMK 300
           +TILIDNVCN KNLREA  LVS L   GFKPDCF+YN IMKG+C L +G EA+GVYKKMK
Sbjct: 241 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 300

Query: 301 EEGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTYTSLMNGMCRQG 357
           EEG+EPD +T+NTLIFGLSK+GRV++AR +L  M + G+ PD  TYTSLMNGMCR+G
Sbjct: 301 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349

[Close]

BLAST of Carg07924 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 191.0 bits (484), Expect = 2.1e-48
Identity = 132/425 (31.06%), Postives = 201/425 (47.29%), Query Frame = 0


Query: 46  SRENQSAQSSAHGEKPKLPTLFKSASLADAKKLYSSFINTTKAPLDVRFYNSLLQSYASI 105
           S  ++   S  +G   K  TL    S ++    YSS +N++ A  DV   N L Q   + 
Sbjct: 58  SAASKVESSGLNGRAQKFETLSSGYSNSNGNGHYSS-VNSSFALEDVESNNHLRQMVRT- 117

Query: 106 ASLNDSISFLRHMSKVQPSFSPERSTFHVLLSTSGNGTDSSLASVRQILNFMVTQGFNPD 165
             L +   FL +M  V     P+      L+   G           +IL  +   G  PD
Sbjct: 118 GELEEGFKFLENM--VYHGNVPDIIPCTTLI--RGFCRLGKTRKAAKILEILEGSGAVPD 177

Query: 166 RATTDIAVRSLCSAGLIDEAVELVREFSQKHSPPDSYTYNHLVKQLCKSRSLSTVYDFIE 225
             T ++ +   C AG I+ A+ ++   S     PD  TYN +++ LC S  L    + ++
Sbjct: 178 VITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLD 237

Query: 226 EMRSSCGATPDLVTYTILIDNVCNGKNLREATRLVSVLAKEGFKPDCFVYNIIMKGYCML 285
            M       PD++TYTILI+  C    +  A +L+  +   G  PD   YN+++ G C  
Sbjct: 238 RMLQR-DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 297

Query: 286 GRGVEAIGVYKKMKEEGLEPDVVTFNTLIFGLSKSGRVKDARKFLDIMAEMGHFPDAVTY 345
           GR  EAI     M   G +P+V+T N ++  +  +GR  DA K L  M   G  P  VT+
Sbjct: 298 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 357

Query: 346 TSLMNGMCRQGDALGALSLLEEMEAKGCSPNSCTYNTLLHGLSKSRLLDRGIELYGLMKS 405
             L+N +CR+G    A+ +LE+M   GC PNS +YN LLHG  K + +DR IE    M S
Sbjct: 358 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 417

Query: 406 SDMKLEVASYATFVRALCRSGRIAEAYEVFDYAVESKSLTDVTAYSTLEITLKALKKAGE 465
                ++ +Y T + ALC+ G++ +A E+ +  + SK  + V    T    +  L KAG+
Sbjct: 418 RGCYPDIVTYNTMLTALCKDGKVEDAVEILN-QLSSKGCSPVLI--TYNTVIDGLAKAGK 469

Query: 466 KGNVI 471
            G  I
Sbjct: 478 TGKAI 469

[Close]

BLAST of Carg07924 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 184.1 bits (466), Expect = 2.6e-46
Identity = 96/288 (33.33%), Postives = 155/288 (53.82%), Query Frame = 0


Query: 147 LASVRQILNFMVTQGFNPDRATTDIAVRSLCSAGLIDEAVELVREFSQKHSPPDSYTYNH 206
           +     +L  M  +G+ PD  +    V   C  G +D+  +L+    +K   P+SY Y  
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321

Query: 207 LVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVTYTILIDNVCNGKNLREATRLVSVLAKE 266
           ++  LC+   L+   +   EM    G  PD V YT LID  C   ++R A++    +   
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 381

Query: 267 GFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMKEEGLEPDVVTFNTLIFGLSKSGRVKDA 326
              PD   Y  I+ G+C +G  VEA  ++ +M  +GLEPD VTF  LI G  K+G +KDA
Sbjct: 382 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 441

Query: 327 RKFLDIMAEMGHFPDAVTYTSLMNGMCRQGDALGALSLLEEMEAKGCSPNSCTYNTLLHG 386
            +  + M + G  P+ VTYT+L++G+C++GD   A  LL EM   G  PN  TYN++++G
Sbjct: 442 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 501

Query: 387 LSKSRLLDRGIELYGLMKSSDMKLEVASYATFVRALCRSGRIAEAYEV 435
           L KS  ++  ++L G  +++ +  +  +Y T + A C+SG + +A E+
Sbjct: 502 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548

[Close]

BLAST of Carg07924 vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 184.1 bits (466), Expect = 2.6e-46
Identity = 96/288 (33.33%), Postives = 155/288 (53.82%), Query Frame = 0


Query: 147 LASVRQILNFMVTQGFNPDRATTDIAVRSLCSAGLIDEAVELVREFSQKHSPPDSYTYNH 206
           +     +L  M  +G+ PD  +    V   C  G +D+  +L+    +K   P+SY Y  
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321

Query: 207 LVKQLCKSRSLSTVYDFIEEMRSSCGATPDLVTYTILIDNVCNGKNLREATRLVSVLAKE 266
           ++  LC+   L+   +   EM    G  PD V YT LID  C   ++R A++    +   
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 381

Query: 267 GFKPDCFVYNIIMKGYCMLGRGVEAIGVYKKMKEEGLEPDVVTFNTLIFGLSKSGRVKDA 326
              PD   Y  I+ G+C +G  VEA  ++ +M  +GLEPD VTF  LI G  K+G +KDA
Sbjct: 382 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 441

Query: 327 RKFLDIMAEMGHFPDAVTYTSLMNGMCRQGDALGALSLLEEMEAKGCSPNSCTYNTLLHG 386
            +  + M + G  P+ VTYT+L++G+C++GD   A  LL EM   G  PN  TYN++++G
Sbjct: 442 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 501

Query: 387 LSKSRLLDRGIELYGLMKSSDMKLEVASYATFVRALCRSGRIAEAYEV 435
           L KS  ++  ++L G  +++ +  +  +Y T + A C+SG + +A E+
Sbjct: 502 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548

The following BLAST results are available for this feature:

BLAST of Carg07924 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026711.1	1.7e-262	100.00	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022926982.1	3.3e-261	99.36	pentatricopeptide repeat-containing protein At2g17670 [Cucurbita moschata] >XP_0...	[more]
KAG6594740.1	8.1e-260	99.15	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_023518399.1	9.8e-258	98.09	pentatricopeptide repeat-containing protein At2g17670-like [Cucurbita pepo subsp...	[more]
XP_023003882.1	1.4e-248	94.47	pentatricopeptide repeat-containing protein At2g17670-like [Cucurbita maxima] >X...	[more]

BLAST of Carg07924 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84J71	5.8e-152	57.87	Pentatricopeptide repeat-containing protein At2g17670 OS=Arabidopsis thaliana OX...	[more]
Q3EDF8	3.0e-47	31.06	Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX...	[more]
Q0WVK7	3.6e-45	33.33	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop...	[more]
Q9ASZ8	2.3e-44	28.86	Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX...	[more]
Q3ECK2	2.3e-44	27.18	Pentatricopeptide repeat-containing protein At1g62680, mitochondrial OS=Arabidop...	[more]

BLAST of Carg07924 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EGP9	1.6e-261	99.36	pentatricopeptide repeat-containing protein At2g17670 OS=Cucurbita moschata OX=3...	[more]
A0A6J1KT16	6.9e-249	94.47	pentatricopeptide repeat-containing protein At2g17670-like OS=Cucurbita maxima O...	[more]
A0A6J1BW58	1.3e-223	86.41	pentatricopeptide repeat-containing protein At2g17670 OS=Momordica charantia OX=...	[more]
A0A0A0KHF8	9.4e-214	81.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507510 PE=4 SV=1	[more]
A0A1S4DT84	1.3e-207	80.21	pentatricopeptide repeat-containing protein At2g17670 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of Carg07924 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17670.1	4.1e-153	57.87	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G17670.2	3.2e-105	53.50	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G09900.1	2.1e-48	31.06	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G05670.1	2.6e-46	33.33	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G05670.2	2.6e-46	33.33	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 340..389 e-value: 5.9E-16 score: 58.4 coord: 199..249 e-value: 1.8E-10 score: 40.8 coord: 270..319 e-value: 3.8E-14 score: 52.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 173..192 e-value: 0.47 score: 10.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 343..377 e-value: 2.8E-10 score: 37.7 coord: 274..307 e-value: 4.0E-10 score: 37.2 coord: 378..409 e-value: 2.3E-6 score: 25.4 coord: 414..442 e-value: 2.2E-4 score: 19.2 coord: 202..236 e-value: 4.9E-4 score: 18.1 coord: 308..342 e-value: 9.4E-7 score: 26.6 coord: 238..272 e-value: 8.0E-4 score: 17.4
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 409..437 e-value: 1.2E-5 score: 25.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 306..340 score: 12.024604
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 341..375 score: 13.208424
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 165..199 score: 8.769097
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 376..410 score: 10.424253
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 271..305 score: 12.58363
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 200..230 score: 8.977363
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 411..445 score: 9.065053
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 236..270 score: 10.194067
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 62..231 e-value: 6.3E-22 score: 80.3 coord: 232..356 e-value: 1.4E-36 score: 128.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 357..468 e-value: 3.1E-22 score: 80.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..63
None	No IPR available	PANTHER	PTHR47933	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL	coord: 1..469
None	No IPR available	PANTHER	PTHR47933:SF34	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 1..469

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07924-RA	Carg07924-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding