Carg07902 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07902
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein PHR1-LIKE 2-like
Location	Carg_Chr07: 1626700 .. 1629996 (+)
RNA-Seq Expression	Carg07902
Synteny	Carg07902

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACCGTTGAAATCCGTGCCAACTTCCTCTGTTTCTCTCTCTCTCTCTCTCTCTCTCTTCTTCTTCTCTACATCCTTTTCGCCGTCTAGTTCTTGGAAAGGGATTGGAGGCTCGATTTTGTAATTCAATGCCCCAACAGATTTCATCTTCTCTTTTGTATCTCTAGAAAATTTGGACACCAAAATTCATCGTTTCTTTCCGGTGTTGACTGATTTTCACTTTCAGCATTTCTTTTGGCGATTTGGAAGGTTATGTTTCCAAGACTTGTGAATCCTGACGGAGATATCCAGATCCATGGCAGCCATGGTTCTGTTGCTTCCGACCTCACTCATCCCCACAGGGGTGATCCTTGTCTCGTTTTGACTTCAGATCCCAAACCTCGACTCCGATGGACTGCCGATCTTCACGAGCGATTCGTCGATGCTGTTACTCAACTCGGTGGTGCTAACAGTCAGTACTCTTTCCTCTTCTTCTTCTTCTTCTTCTTTTTTACTTCAATGAATCGATTTTTGTTCGCTTTGGTAATGTTCAGCTGAGCTTTTATTCTCATGCATCTGGATTTTTATTACCTATTATTGGCACTATTTACTCTAGGATTTTCATTTTAAGCTCTCTAGGATTAGGAGACCTGGCTATTGCGTTGAAATGAATTGTGTTCCGTCAGGGTCAAGCACTGGACGCCTACATTTTAGTACCGGTTTTCGAATAACAATGTAAACGGTGAGTTTGATGTTAGGAGCTTCAATAATTCGGGGTTATTGTTGAAAGATTCCCCTTCCATGAAGAGCATCCAGTATTTGGGCTGGTATAAAATGTATAAAATTACTTAGCTTATGGCTAATGAACCCAAAAGAAAAGAACATGGGACTAGACTTTAGACAAATGGGATGGGAGGTCAGGCTCAGTTATTCCAGAGTAATTAAATTCGGAAGTTCAGCTAGTTTCTATTGCTTGGTTTCAGGAATATTGTGAGATTACATAGCTTGAGTGCTTTAAAGAATGTTCATAAATGATTATTGTCAGGGGAGTTTGTGCTTATAAATGGCTCATAAATTGAGTAGATTTAGAAAGTGGATGGATGATCTTGATGTTGTTGGGGTGTCACTTTGTTTTGTCTCACTTTAATTATGATGTTAATACCATTCCTTGCATCACCTAACTGGGCTTTGGACATTCATTAGGAAACAATTCAGAGTTTGGGTTTTTAGTGGAAATGATTGGATTAAGAATCCGATGATTAGCTCAAATTGACCCTTCTGACAGAGAAAACCTCCAAGGTTGATAAAAACAGGAAAAAGGCTTACAAATCGCTGTAGAAATTTTTTTTTTCTTCCTTGAAAATCTGCTGCAGCATCTCTAGTTCTAGAAATCTAAGCTGAATGGCAACTAAGAATTCTGTTTAGACTTCTGAAGGAAACCTAATTATAAATCTGACGAAGTCAATTGAACTTTTATGCTCTTTTTGAAGATCTGTTACTTATTTTGTTCCGAAGGCGAAGAGGGCTTGACATGTTTGACATGTTTGACATGTTTGACCATAAGACTGTAGCTTTACAAAAATCAAACGGGATTGTAATCATTAAGTCCACTTGTGCCAAGACGAGCATAGTTCAGAAGTCAAGGTATCAACTCCTTCCATTGAGGTTGGAGGTTTGAAGCTTAACCCGCTAAAGTCCACATGTTTGCAACAGAGAGTCTGCTATGCGTGCTTTGATTGGATGTCTTGGTGGGGACGAGGGTGGGGAATATGGGGTCATATTTGAATTCTAACCAATGATAGGGTTTGACATTTGAACACTTGGTGCAGAAGCTACACCAAAAGCAATAATGCGAACAATGAATGTGAAAGGACTGACTCTCTTCCATTTGAAGAGCCACCTCCAGGTGATCATAATGGCTTAAAAAGGCATCTTTTTATGTAAGAATTCTGATACTGCTGGAGTTCATGGTGAATTTGTATTCATGATGCTTGCTCTCCTTCATTACAGAAATACAGATTAGGTAAGCAATCAGGGAAGGATATGGGTGAGGCCTCTAAAGATGGTAAGGGATAAATCTCTATTTTTTCCCCTTGTTTATCATGTGATGTAAAGCCTCCATGAGTCTGCTGATACTCAACTCCATTATCAGTATTCGCGCTAGCTACTAATTTTTTAAAATTTTAACCTGTCTGTCCAAATATTTAAATCTTTCTTCATGGGTTGGTGCTTTGAACATCAGGTGCATATCTTTTAGAAAGTCCAAGTATCAGTAATTTCTCTCCTGACTTGCCAATTTCTGAAATGACCGAGTAAGATACTTGTGATATTTGTGATAATGCCTTGAATGTTACAAGATTTTAAGTTCAAACTGTTCATAACTTAGATATCTATTTTAGTGGTTATGAAGTCAAGGAGGCATTAAGAGCACAAATGGAAGTGCAAAGTAAGTTACATCTGCAAGTTGAGGTAAAATTCGCATCCTTGACATTAATTAAGATGGAACTTGATATTGGTTTCGGACAGATTCCGTGATGATCCAAATTTGCTAAGTTTCTGGTTGTTAGATTGCTTGCTTAGTTGATTATCCTTGTGCTTGAGTACGCTTCGAATCACGTATTTAAAATGTATGATACACTGCTATAGCTAGCAAGGGAGATTTTTGTACCATTCTTCAGCTAGCTGACCTTACTAGCGTTTGAGCAGGCAGAGAAGCATCTACGAATTCGTCAGGATGCCGAGCGAAGATATTTGGCGATGCTTGAGAGAGCTTGTAAAATGCTTGCAGATCAATTCATTGGAGGTGCGGTATCGGACTCGGACAGCAAGAAGTCTCAAGGACTAGATCGTAAGAGCCCGAGAAGTTCCTCGATCGACCCTCTTGGTTTCTATGCTTCGCAATCACAGGGGATGGAAAGAGCGAATGGCACAGAAGAATTGCAAGGTAATCCTCCTTACCAAAGGGCTGATTGTTCGACCGAAAGCTGCCTAACCTCGAACGAAAGTCCTGGGGGATTGACTATGGAGAAATCTCCTGTGGCAAGCAAGAAAAACATAGTTAACTTGGATTCAGCAAATGCATCTTTGATTGGGATGAAGCTAGGGAAGGAATACAAGATGCTAATATCATCCAAATTAACCATCACGGCGTATCCGAGTGCGACATGTGGGGATGAAATTCTACAAACAAAAACTCATCATGATCCATGAGAAAAGTATGTTCTAGTTTCAACATTGTAAAAAATTTCATCATTTTCCATCCATAGAGAATCTAGCATGAACTAAACATTCCTTAGCTTGTAAAACCAAGCCATTTAG

mRNA sequence

CAAACCGTTGAAATCCGTGCCAACTTCCTCTGTTTCTCTCTCTCTCTCTCTCTCTCTCTTCTTCTTCTCTACATCCTTTTCGCCGTCTAGTTCTTGGAAAGGGATTGGAGGCTCGATTTTGTAATTCAATGCCCCAACAGATTTCATCTTCTCTTTTGTATCTCTAGAAAATTTGGACACCAAAATTCATCGTTTCTTTCCGGTGTTGACTGATTTTCACTTTCAGCATTTCTTTTGGCGATTTGGAAGGTTATGTTTCCAAGACTTGTGAATCCTGACGGAGATATCCAGATCCATGGCAGCCATGGTTCTGTTGCTTCCGACCTCACTCATCCCCACAGGGGTGATCCTTGTCTCGTTTTGACTTCAGATCCCAAACCTCGACTCCGATGGACTGCCGATCTTCACGAGCGATTCGTCGATGCTGTTACTCAACTCGGTGGTGCTAACAAAGCTACACCAAAAGCAATAATGCGAACAATGAATGTGAAAGGACTGACTCTCTTCCATTTGAAGAGCCACCTCCAGAAATACAGATTAGGTAAGCAATCAGGGAAGGATATGGGTGAGGCCTCTAAAGATGGTGCATATCTTTTAGAAAGTCCAAGTATCAGTAATTTCTCTCCTGACTTGCCAATTTCTGAAATGACCGATGGTTATGAAGTCAAGGAGGCATTAAGAGCACAAATGGAAGTGCAAAGTAAGTTACATCTGCAAGTTGAGGCAGAGAAGCATCTACGAATTCGTCAGGATGCCGAGCGAAGATATTTGGCGATGCTTGAGAGAGCTTGTAAAATGCTTGCAGATCAATTCATTGGAGGTGCGGTATCGGACTCGGACAGCAAGAAGTCTCAAGGACTAGATCGTAAGAGCCCGAGAAGTTCCTCGATCGACCCTCTTGGTTTCTATGCTTCGCAATCACAGGGGATGGAAAGAGCGAATGGCACAGAAGAATTGCAAGGTAATCCTCCTTACCAAAGGGCTGATTGTTCGACCGAAAGCTGCCTAACCTCGAACGAAAGTCCTGGGGGATTGACTATGGAGAAATCTCCTGTGGCAAGCAAGAAAAACATAGTTAACTTGGATTCAGCAAATGCATCTTTGATTGGGATGAAGCTAGGGAAGGAATACAAGATGCTAATATCATCCAAATTAACCATCACGGCGTATCCGAGTGCGACATGTGGGGATGAAATTCTACAAACAAAAACTCATCATGATCCATGAGAAAAGTATGTTCTAGTTTCAACATTGTAAAAAATTTCATCATTTTCCATCCATAGAGAATCTAGCATGAACTAAACATTCCTTAGCTTGTAAAACCAAGCCATTTAG

Coding sequence (CDS)

ATGTTTCCAAGACTTGTGAATCCTGACGGAGATATCCAGATCCATGGCAGCCATGGTTCTGTTGCTTCCGACCTCACTCATCCCCACAGGGGTGATCCTTGTCTCGTTTTGACTTCAGATCCCAAACCTCGACTCCGATGGACTGCCGATCTTCACGAGCGATTCGTCGATGCTGTTACTCAACTCGGTGGTGCTAACAAAGCTACACCAAAAGCAATAATGCGAACAATGAATGTGAAAGGACTGACTCTCTTCCATTTGAAGAGCCACCTCCAGAAATACAGATTAGGTAAGCAATCAGGGAAGGATATGGGTGAGGCCTCTAAAGATGGTGCATATCTTTTAGAAAGTCCAAGTATCAGTAATTTCTCTCCTGACTTGCCAATTTCTGAAATGACCGATGGTTATGAAGTCAAGGAGGCATTAAGAGCACAAATGGAAGTGCAAAGTAAGTTACATCTGCAAGTTGAGGCAGAGAAGCATCTACGAATTCGTCAGGATGCCGAGCGAAGATATTTGGCGATGCTTGAGAGAGCTTGTAAAATGCTTGCAGATCAATTCATTGGAGGTGCGGTATCGGACTCGGACAGCAAGAAGTCTCAAGGACTAGATCGTAAGAGCCCGAGAAGTTCCTCGATCGACCCTCTTGGTTTCTATGCTTCGCAATCACAGGGGATGGAAAGAGCGAATGGCACAGAAGAATTGCAAGGTAATCCTCCTTACCAAAGGGCTGATTGTTCGACCGAAAGCTGCCTAACCTCGAACGAAAGTCCTGGGGGATTGACTATGGAGAAATCTCCTGTGGCAAGCAAGAAAAACATAGTTAACTTGGATTCAGCAAATGCATCTTTGATTGGGATGAAGCTAGGGAAGGAATACAAGATGCTAATATCATCCAAATTAACCATCACGGCGTATCCGAGTGCGACATGTGGGGATGAAATTCTACAAACAAAAACTCATCATGATCCATGA

Protein sequence

MFPRLVNPDGDIQIHGSHGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSISNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERACKMLADQFIGGAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQGMERANGTEELQGNPPYQRADCSTESCLTSNESPGGLTMEKSPVASKKNIVNLDSANASLIGMKLGKEYKMLISSKLTITAYPSATCGDEILQTKTHHDP

Homology

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BLAST of Carg07902 vs. NCBI nr
Match: KAG7026689.1 (Protein PHR1-LIKE 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 643.3 bits (1658), Expect = 1.1e-180
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGSHGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPDGDIQIHGSHGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDGDIQIHGSHGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSI 120
           QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSI
Sbjct: 61  QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSI 120

Query: 121 SNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC 180
           SNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC
Sbjct: 121 SNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC 180

Query: 181 KMLADQFIGGAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQGMERANGTEELQGNPP 240
           KMLADQFIGGAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQGMERANGTEELQGNPP
Sbjct: 181 KMLADQFIGGAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQGMERANGTEELQGNPP 240

Query: 241 YQRADCSTESCLTSNESPGGLTMEKSPVASKKNIVNLDSANASLIGMKLGKEYKMLISSK 300
           YQRADCSTESCLTSNESPGGLTMEKSPVASKKNIVNLDSANASLIGMKLGKEYKMLISSK
Sbjct: 241 YQRADCSTESCLTSNESPGGLTMEKSPVASKKNIVNLDSANASLIGMKLGKEYKMLISSK 300

Query: 301 LTITAYPSATCGDEILQTKTHHDP 325
           LTITAYPSATCGDEILQTKTHHDP
Sbjct: 301 LTITAYPSATCGDEILQTKTHHDP 324

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BLAST of Carg07902 vs. NCBI nr
Match: XP_022926852.1 (protein PHR1-LIKE 2-like [Cucurbita moschata])

HSP 1 Score: 564.3 bits (1453), Expect = 6.8e-157
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGSHGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPDGDIQIHGSHGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDGDIQIHGSHGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSI 120
           QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSI
Sbjct: 61  QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSI 120

Query: 121 SNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC 180
           SNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC
Sbjct: 121 SNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC 180

Query: 181 KMLADQFIGGAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQGMERANGTEELQGNPP 240
           KMLADQFIGGAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQGMERANGTEELQGNPP
Sbjct: 181 KMLADQFIGGAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQGMERANGTEELQGNPP 240

Query: 241 YQRADCSTESCLTSNESPGGLTMEKSPVASKKNIVNLDSANASLI 286
           YQRADCSTESCLTSNESPGGLTMEKSPVASKKNIVNLDSANASLI
Sbjct: 241 YQRADCSTESCLTSNESPGGLTMEKSPVASKKNIVNLDSANASLI 285

[Close]

BLAST of Carg07902 vs. NCBI nr
Match: XP_023518425.1 (protein PHR1-LIKE 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 557.0 bits (1434), Expect = 1.1e-154
Identity = 282/285 (98.95%), Postives = 282/285 (98.95%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGSHGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPDGDIQIHGS GSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDGDIQIHGSRGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSI 120
           QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSI
Sbjct: 61  QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSI 120

Query: 121 SNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC 180
           SNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC
Sbjct: 121 SNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC 180

Query: 181 KMLADQFIGGAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQGMERANGTEELQGNPP 240
           KMLADQFIGGAVSDSDSKKSQGLD KSPRSSSIDPLGFYASQSQGMERANGTEELQ NPP
Sbjct: 181 KMLADQFIGGAVSDSDSKKSQGLDHKSPRSSSIDPLGFYASQSQGMERANGTEELQANPP 240

Query: 241 YQRADCSTESCLTSNESPGGLTMEKSPVASKKNIVNLDSANASLI 286
           YQRADCSTESCLTSNESPGGLTMEKSPVASKKNIVNLDSANASLI
Sbjct: 241 YQRADCSTESCLTSNESPGGLTMEKSPVASKKNIVNLDSANASLI 285

[Close]

BLAST of Carg07902 vs. NCBI nr
Match: KAG6594720.1 (Protein PHR1-LIKE 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 548.5 bits (1412), Expect = 3.8e-152
Identity = 279/285 (97.89%), Postives = 279/285 (97.89%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGSHGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPDGDIQIHGS GSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDGDIQIHGSRGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSI 120
           QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSI
Sbjct: 61  QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSI 120

Query: 121 SNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC 180
           SNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC
Sbjct: 121 SNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC 180

Query: 181 KMLADQFIGGAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQGMERANGTEELQGNPP 240
           KMLADQFIGGAVSDSDSKKSQGLD KSPRSSSIDPLGFYASQSQGMER NGTEELQ NPP
Sbjct: 181 KMLADQFIGGAVSDSDSKKSQGLDCKSPRSSSIDPLGFYASQSQGMERVNGTEELQANPP 240

Query: 241 YQRADCSTESCLTSNESPGGLTMEKSPVASKKNIVNLDSANASLI 286
            QRADCSTESCLTSNESPGGLTMEKSPVASKK IVNLDSANASLI
Sbjct: 241 CQRADCSTESCLTSNESPGGLTMEKSPVASKKTIVNLDSANASLI 285

[Close]

BLAST of Carg07902 vs. NCBI nr
Match: XP_023003570.1 (protein PHR1-LIKE 2-like [Cucurbita maxima])

HSP 1 Score: 538.9 bits (1387), Expect = 3.0e-149
Identity = 274/285 (96.14%), Postives = 276/285 (96.84%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGSHGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNP+GDIQIHGS GSVASDLTHPHRGDPCLVLTSDPKPRLRWT DLHERFVDAVT
Sbjct: 1   MFPRLVNPEGDIQIHGSRGSVASDLTHPHRGDPCLVLTSDPKPRLRWTTDLHERFVDAVT 60

Query: 61  QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSI 120
           QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLL SPSI
Sbjct: 61  QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLGSPSI 120

Query: 121 SNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC 180
           +NFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC
Sbjct: 121 NNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC 180

Query: 181 KMLADQFIGGAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQGMERANGTEELQGNPP 240
           KMLADQFI GAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQGMER NGTEELQ NPP
Sbjct: 181 KMLADQFIEGAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQGMERVNGTEELQANPP 240

Query: 241 YQRADCSTESCLTSNESPGGLTMEKSPVASKKNIVNLDSANASLI 286
            QRADCSTESCLTSNESPGGLTMEKSPV SKK IVNLDSANASLI
Sbjct: 241 CQRADCSTESCLTSNESPGGLTMEKSPVGSKKIIVNLDSANASLI 285

[Close]

BLAST of Carg07902 vs. ExPASy Swiss-Prot
Match: Q94A57 (Protein PHR1-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=PHL2 PE=1 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.3e-46
Identity = 113/229 (49.34%), Postives = 150/229 (65.50%), Query Frame = 0


Query: 31  GDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGANKATPKAIMRTMNVKGLTLFHLKSH 90
           GD CLVLT+DPKPRLRWT +LHERFVDAVTQLGG +KATPK IMRTM VKGLTL+HLKSH
Sbjct: 30  GDACLVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 89

Query: 91  LQKYRLGKQSGKDMGEASKDGAYLLESP---SISNFSPDLPISEMTDGYEVKEALRAQME 150
           LQK+RLG+Q+GK+  E SKD + + ES    S S  S  +   E  +GY+V EALRAQME
Sbjct: 90  LQKFRLGRQAGKESTENSKDASCVGESQDTGSSSTSSMRMAQQEQNEGYQVTEALRAQME 149

Query: 151 VQSKLHLQVEAEKHLRIRQDAERRYL-AMLERACKMLADQFIGGAVSDSDSKKSQGLDRK 210
           VQ +LH Q+E ++ L++R +A+ +YL ++LE+ACK   +Q    A  ++  ++   L  K
Sbjct: 150 VQRRLHDQLEVQRRLQLRIEAQGKYLQSILEKACKAFDEQAATFAGLEAAREELSELAIK 209

Query: 211 SPRSSSIDPLGFY-ASQSQGMERANGTEELQGNPPYQRADCSTESCLTS 255
              SS    + ++ A++   M   +       N      +CS ES LTS
Sbjct: 210 VSNSSQGTSVPYFDATKMMMMPSLSELAVAIDNKNNITTNCSVESSLTS 258

[Close]

BLAST of Carg07902 vs. ExPASy Swiss-Prot
Match: Q8LAJ7 (Protein PHR1-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=PHL3 PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.3e-45
Identity = 101/184 (54.89%), Postives = 132/184 (71.74%), Query Frame = 0


Query: 12  IQIHGSHGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGANKATPK 71
           + + GS G  +     P   D CLVLT+DPKPRLRWT++LHERFVDAVTQLGG +KATPK
Sbjct: 9   LPLDGSLGDYSDGTNLPI--DACLVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPK 68

Query: 72  AIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESP---SISNFSPDLP 131
            IMRTM VKGLTL+HLKSHLQK+RLG+QS K+  + SKD + + ES    S S  S  L 
Sbjct: 69  TIMRTMGVKGLTLYHLKSHLQKFRLGRQSCKESIDNSKDVSCVAESQDTGSSSTSSLRLA 128

Query: 132 ISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYL-AMLERACKMLADQF 191
             E  + Y+V EALRAQMEVQ +LH Q+E ++ L++R +A+ +YL ++LE+ACK + +Q 
Sbjct: 129 AQEQNESYQVTEALRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILEKACKAIEEQA 188

[Close]

BLAST of Carg07902 vs. ExPASy Swiss-Prot
Match: Q9SAK5 (Myb family transcription factor APL OS=Arabidopsis thaliana OX=3702 GN=APL PE=1 SV=2)

HSP 1 Score: 155.2 bits (391), Expect = 1.2e-36
Identity = 84/166 (50.60%), Postives = 115/166 (69.28%), Query Frame = 0


Query: 30  RGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGANKATPKAIMRTMNVKGLTLFHLKS 89
           +GD  LVLT+DPKPRLRWT +LHERFVDAV QLGG +KATPK IMR M VKGLTL+HLKS
Sbjct: 22  QGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKS 81

Query: 90  HLQKYRLGKQSGKDMGE-ASKDGAYLLESPSISNFSPDLPISEMTDGYEVKEALRAQMEV 149
           HLQK+RLGKQ  K+ G+ ++K+G+         N +        + G   +     QMEV
Sbjct: 82  HLQKFRLGKQPHKEYGDHSTKEGSRASAMDIQRNVA-------SSSGMMSRNMNEMQMEV 141

Query: 150 QSKLHLQVEAEKHLRIRQDAERRYL-AMLERACKMLADQFIGGAVS 194
           Q +LH Q+E ++HL++R +A+ +Y+ ++LERAC+ LA + +  A +
Sbjct: 142 QRRLHEQLEVQRHLQLRIEAQGKYMQSILERACQTLAGENMAAATA 180

[Close]

BLAST of Carg07902 vs. ExPASy Swiss-Prot
Match: E5L8F7 (Myb family transcription factor IPN2 OS=Lotus japonicus OX=34305 GN=IPN2 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 6.8e-35
Identity = 94/209 (44.98%), Postives = 128/209 (61.24%), Query Frame = 0


Query: 30  RGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGANKATPKAIMRTMNVKGLTLFHLKS 89
           +GD  LVLT+DPKPRLRWT +LHERFVDAVTQLGG +KATPK IMR M VKGLTL+HLKS
Sbjct: 23  QGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKS 82

Query: 90  HLQKYRLGKQSGKDMGEAS-KDGAYLLESPSISNFSPDLPISEMTDGYEVKEALRAQMEV 149
           HLQK+RLGKQ  K+  + S KDG       S      +   S    G  + E    Q+EV
Sbjct: 83  HLQKFRLGKQPHKEFNDHSIKDGM----RASALELQRNTASSSAMIGRNMNE---MQIEV 142

Query: 150 QSKLHLQVEAEKHLRIRQDAERRYL-AMLERACKMLADQFIGGAVSDSDSKKSQGLDRKS 209
           Q +LH Q+E +KHL++R +A+ +Y+ ++LE+A + LA + +  A ++      Q +    
Sbjct: 143 QRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMASAATNLKGIGPQTIPDMG 202

Query: 210 PRSSSIDPLGFYASQSQGMERANGTEELQ 237
                  PLGF + Q   +    G ++L+
Sbjct: 203 IMKEFGSPLGF-SFQDLDLYGGGGGDQLE 223

[Close]

BLAST of Carg07902 vs. ExPASy Swiss-Prot
Match: Q9SQQ9 (Myb-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=MYR2 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 8.9e-35
Identity = 99/237 (41.77%), Postives = 144/237 (60.76%), Query Frame = 0


Query: 31  GDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGANKATPKAIMRTMNVKGLTLFHLKSH 90
           GD  L+L++D KPRL+WT DLHERF++AV QLGGA+KATPK IM+ M + GLTL+HLKSH
Sbjct: 34  GDSGLILSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSH 93

Query: 91  LQKYRLGKQ-SGKDMGEASKDGAYLL---ESPSISNF-SPDLPIS-EMTDGYEVKEALRA 150
           LQKYRL K  +G+     +K G   +   ++P      S +L I  +      + EAL+ 
Sbjct: 94  LQKYRLSKNLNGQANNSFNKIGIMTMMEEKTPDADEIQSENLSIGPQPNKNSPIGEALQM 153

Query: 151 QMEVQSKLHLQVEAEKHLRIRQDAERRYL-AMLERACKMLADQFIGGAVSDSD----SKK 210
           Q+EVQ +LH Q+E ++HL++R +A+ +YL ++LE+A + L  Q +G A  ++     S+ 
Sbjct: 154 QIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGAAGIEAAKVQLSEL 213

Query: 211 SQGLDRKSPRSSSIDPLGFYASQSQGMERANGTEELQGNPPYQRADCSTESCLTSNE 257
              +  + P SS ++P       SQ         ++Q N P    DCS ESCLTS+E
Sbjct: 214 VSKVSAEYPNSSFLEPKELQNLCSQ---------QMQTNYP---PDCSLESCLTSSE 258

[Close]

BLAST of Carg07902 vs. ExPASy TrEMBL
Match: A0A6J1EFI1 (protein PHR1-LIKE 2-like OS=Cucurbita moschata OX=3662 GN=LOC111433839 PE=3 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 3.3e-157
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGSHGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPDGDIQIHGSHGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDGDIQIHGSHGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSI 120
           QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSI
Sbjct: 61  QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSI 120

Query: 121 SNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC 180
           SNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC
Sbjct: 121 SNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC 180

Query: 181 KMLADQFIGGAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQGMERANGTEELQGNPP 240
           KMLADQFIGGAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQGMERANGTEELQGNPP
Sbjct: 181 KMLADQFIGGAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQGMERANGTEELQGNPP 240

Query: 241 YQRADCSTESCLTSNESPGGLTMEKSPVASKKNIVNLDSANASLI 286
           YQRADCSTESCLTSNESPGGLTMEKSPVASKKNIVNLDSANASLI
Sbjct: 241 YQRADCSTESCLTSNESPGGLTMEKSPVASKKNIVNLDSANASLI 285

[Close]

BLAST of Carg07902 vs. ExPASy TrEMBL
Match: A0A6J1KS45 (protein PHR1-LIKE 2-like OS=Cucurbita maxima OX=3661 GN=LOC111497132 PE=3 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.5e-149
Identity = 274/285 (96.14%), Postives = 276/285 (96.84%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGSHGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNP+GDIQIHGS GSVASDLTHPHRGDPCLVLTSDPKPRLRWT DLHERFVDAVT
Sbjct: 1   MFPRLVNPEGDIQIHGSRGSVASDLTHPHRGDPCLVLTSDPKPRLRWTTDLHERFVDAVT 60

Query: 61  QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSI 120
           QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLL SPSI
Sbjct: 61  QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLGSPSI 120

Query: 121 SNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC 180
           +NFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC
Sbjct: 121 NNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC 180

Query: 181 KMLADQFIGGAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQGMERANGTEELQGNPP 240
           KMLADQFI GAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQGMER NGTEELQ NPP
Sbjct: 181 KMLADQFIEGAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQGMERVNGTEELQANPP 240

Query: 241 YQRADCSTESCLTSNESPGGLTMEKSPVASKKNIVNLDSANASLI 286
            QRADCSTESCLTSNESPGGLTMEKSPV SKK IVNLDSANASLI
Sbjct: 241 CQRADCSTESCLTSNESPGGLTMEKSPVGSKKIIVNLDSANASLI 285

[Close]

BLAST of Carg07902 vs. ExPASy TrEMBL
Match: A0A1S4DTK9 (LOW QUALITY PROTEIN: myb family transcription factor APL-like OS=Cucumis melo OX=3656 GN=LOC103485209 PE=3 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 1.3e-142
Identity = 262/285 (91.93%), Postives = 269/285 (94.39%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGSHGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPDGDIQIHG  GSVASDLTH HRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSI 120
           QLGGA KATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPS 
Sbjct: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 SNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC 180
           +NFSPDLPISEM DGYEVKEALRAQMEVQSKLHLQVEAEKHL+IRQDAERRYLAMLERAC
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVEAEKHLQIRQDAERRYLAMLERAC 180

Query: 181 KMLADQFIGGAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQGMERANGTEELQGNPP 240
           KMLADQFI GAVSDSDSKKS+G DRKSPRS+SIDPLGFY +QSQ MER NGTEE+Q N P
Sbjct: 181 KMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNGTEEVQANLP 240

Query: 241 YQRADCSTESCLTSNESPGGLTMEKSPVASKKNIVNLDSANASLI 286
            QRADCSTESCLTSNESPGGL MEKSPVASKKN+VNLDSA ASLI
Sbjct: 241 CQRADCSTESCLTSNESPGGLAMEKSPVASKKNMVNLDSATASLI 285

[Close]

BLAST of Carg07902 vs. ExPASy TrEMBL
Match: A0A6J1IL09 (protein PHR1-LIKE 2-like OS=Cucurbita maxima OX=3661 GN=LOC111478004 PE=3 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.7e-142
Identity = 267/307 (86.97%), Postives = 280/307 (91.21%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGSHGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPDGDIQIHG  GSVAS+LTH HRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDGDIQIHGGRGSVASELTHSHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSI 120
           QLGGA+KATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPS 
Sbjct: 61  QLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 SNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC 180
           +NFSPDLPISEM DGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC 180

Query: 181 KMLADQFIGGAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQGMERANGTEELQGNPP 240
           KMLADQFIGGAVSDSDSKKSQG +RKSPRS SIDPLGFYASQSQ MER NGTEE+Q N  
Sbjct: 181 KMLADQFIGGAVSDSDSKKSQGQNRKSPRSFSIDPLGFYASQSQEMERVNGTEEVQTNLR 240

Query: 241 YQRADCSTESCLTSNESPGGLTMEKSPVASKKNIVNLDSANASLI---GMKLGKEYKMLI 300
            QRADCSTESCLTSNESPGGL MEKSPVASKKN+ NLDS NASLI     ++ ++  M+ 
Sbjct: 241 RQRADCSTESCLTSNESPGGLAMEKSPVASKKNMANLDSENASLIWGEAKEIIQDANMIQ 300

Query: 301 SSKLTIT 305
            + LTI+
Sbjct: 301 VNHLTIS 307

[Close]

BLAST of Carg07902 vs. ExPASy TrEMBL
Match: A0A6J1GGC2 (protein PHR1-LIKE 2-like OS=Cucurbita moschata OX=3662 GN=LOC111453659 PE=3 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.7e-142
Identity = 263/285 (92.28%), Postives = 269/285 (94.39%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGSHGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPDGDIQIHG  GSVAS+LTH HRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDGDIQIHGGRGSVASELTHSHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSI 120
           QLGGA+KATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPS 
Sbjct: 61  QLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 SNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC 180
           +NFSPDLPISEM DGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC 180

Query: 181 KMLADQFIGGAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQGMERANGTEELQGNPP 240
           KMLADQFIGGAVSDSDSKKSQG +RKSPRS SIDPLGFYASQSQ MER NGTEE+Q N  
Sbjct: 181 KMLADQFIGGAVSDSDSKKSQGQNRKSPRSFSIDPLGFYASQSQEMERVNGTEEVQTNLR 240

Query: 241 YQRADCSTESCLTSNESPGGLTMEKSPVASKKNIVNLDSANASLI 286
            QRADCSTESCLTSNESPGGL MEKSPVASKKN+ NLDS NASLI
Sbjct: 241 RQRADCSTESCLTSNESPGGLAMEKSPVASKKNMANLDSENASLI 285

[Close]

BLAST of Carg07902 vs. TAIR 10
Match: AT3G24120.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 188.3 bits (477), Expect = 9.4e-48
Identity = 113/229 (49.34%), Postives = 150/229 (65.50%), Query Frame = 0


Query: 31  GDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGANKATPKAIMRTMNVKGLTLFHLKSH 90
           GD CLVLT+DPKPRLRWT +LHERFVDAVTQLGG +KATPK IMRTM VKGLTL+HLKSH
Sbjct: 30  GDACLVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 89

Query: 91  LQKYRLGKQSGKDMGEASKDGAYLLESP---SISNFSPDLPISEMTDGYEVKEALRAQME 150
           LQK+RLG+Q+GK+  E SKD + + ES    S S  S  +   E  +GY+V EALRAQME
Sbjct: 90  LQKFRLGRQAGKESTENSKDASCVGESQDTGSSSTSSMRMAQQEQNEGYQVTEALRAQME 149

Query: 151 VQSKLHLQVEAEKHLRIRQDAERRYL-AMLERACKMLADQFIGGAVSDSDSKKSQGLDRK 210
           VQ +LH Q+E ++ L++R +A+ +YL ++LE+ACK   +Q    A  ++  ++   L  K
Sbjct: 150 VQRRLHDQLEVQRRLQLRIEAQGKYLQSILEKACKAFDEQAATFAGLEAAREELSELAIK 209

Query: 211 SPRSSSIDPLGFY-ASQSQGMERANGTEELQGNPPYQRADCSTESCLTS 255
              SS    + ++ A++   M   +       N      +CS ES LTS
Sbjct: 210 VSNSSQGTSVPYFDATKMMMMPSLSELAVAIDNKNNITTNCSVESSLTS 258

[Close]

BLAST of Carg07902 vs. TAIR 10
Match: AT4G13640.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 183.7 bits (465), Expect = 2.3e-46
Identity = 101/184 (54.89%), Postives = 132/184 (71.74%), Query Frame = 0


Query: 12  IQIHGSHGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGANKATPK 71
           + + GS G  +     P   D CLVLT+DPKPRLRWT++LHERFVDAVTQLGG +KATPK
Sbjct: 9   LPLDGSLGDYSDGTNLPI--DACLVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPK 68

Query: 72  AIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESP---SISNFSPDLP 131
            IMRTM VKGLTL+HLKSHLQK+RLG+QS K+  + SKD + + ES    S S  S  L 
Sbjct: 69  TIMRTMGVKGLTLYHLKSHLQKFRLGRQSCKESIDNSKDVSCVAESQDTGSSSTSSLRLA 128

Query: 132 ISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYL-AMLERACKMLADQF 191
             E  + Y+V EALRAQMEVQ +LH Q+E ++ L++R +A+ +YL ++LE+ACK + +Q 
Sbjct: 129 AQEQNESYQVTEALRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILEKACKAIEEQA 188

[Close]

BLAST of Carg07902 vs. TAIR 10
Match: AT3G24120.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 183.0 bits (463), Expect = 3.9e-46
Identity = 113/232 (48.71%), Postives = 150/232 (64.66%), Query Frame = 0


Query: 31  GDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGANKATPKAIMRTMNVKGLTLFHLKSH 90
           GD CLVLT+DPKPRLRWT +LHERFVDAVTQLGG +KATPK IMRTM VKGLTL+HLKSH
Sbjct: 30  GDACLVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 89

Query: 91  LQKYRLGKQSGKDMGEASKDGAYLLESP---SISNFSPDLPISEMTDGYEVKEALRAQME 150
           LQK+RLG+Q+GK+  E SKD + + ES    S S  S  +   E  +GY+V EALRAQME
Sbjct: 90  LQKFRLGRQAGKESTENSKDASCVGESQDTGSSSTSSMRMAQQEQNEGYQVTEALRAQME 149

Query: 151 VQSKLHLQVE---AEKHLRIRQDAERRYL-AMLERACKMLADQFIGGAVSDSDSKKSQGL 210
           VQ +LH Q+E    ++ L++R +A+ +YL ++LE+ACK   +Q    A  ++  ++   L
Sbjct: 150 VQRRLHDQLEYGQVQRRLQLRIEAQGKYLQSILEKACKAFDEQAATFAGLEAAREELSEL 209

Query: 211 DRKSPRSSSIDPLGFY-ASQSQGMERANGTEELQGNPPYQRADCSTESCLTS 255
             K   SS    + ++ A++   M   +       N      +CS ES LTS
Sbjct: 210 AIKVSNSSQGTSVPYFDATKMMMMPSLSELAVAIDNKNNITTNCSVESSLTS 261

[Close]

BLAST of Carg07902 vs. TAIR 10
Match: AT4G13640.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 178.3 bits (451), Expect = 9.7e-45
Identity = 101/187 (54.01%), Postives = 132/187 (70.59%), Query Frame = 0


Query: 12  IQIHGSHGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGANKATPK 71
           + + GS G  +     P   D CLVLT+DPKPRLRWT++LHERFVDAVTQLGG +KATPK
Sbjct: 9   LPLDGSLGDYSDGTNLPI--DACLVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPK 68

Query: 72  AIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESP---SISNFSPDLP 131
            IMRTM VKGLTL+HLKSHLQK+RLG+QS K+  + SKD + + ES    S S  S  L 
Sbjct: 69  TIMRTMGVKGLTLYHLKSHLQKFRLGRQSCKESIDNSKDVSCVAESQDTGSSSTSSLRLA 128

Query: 132 ISEMTDGYEVKEALRAQMEVQSKLHLQVE---AEKHLRIRQDAERRYL-AMLERACKMLA 191
             E  + Y+V EALRAQMEVQ +LH Q+E    ++ L++R +A+ +YL ++LE+ACK + 
Sbjct: 129 AQEQNESYQVTEALRAQMEVQRRLHEQLEYTQVQRRLQLRIEAQGKYLQSILEKACKAIE 188

[Close]

BLAST of Carg07902 vs. TAIR 10
Match: AT1G79430.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 155.2 bits (391), Expect = 8.8e-38
Identity = 84/166 (50.60%), Postives = 115/166 (69.28%), Query Frame = 0


Query: 30  RGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGANKATPKAIMRTMNVKGLTLFHLKS 89
           +GD  LVLT+DPKPRLRWT +LHERFVDAV QLGG +KATPK IMR M VKGLTL+HLKS
Sbjct: 22  QGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKS 81

Query: 90  HLQKYRLGKQSGKDMGE-ASKDGAYLLESPSISNFSPDLPISEMTDGYEVKEALRAQMEV 149
           HLQK+RLGKQ  K+ G+ ++K+G+         N +        + G   +     QMEV
Sbjct: 82  HLQKFRLGKQPHKEYGDHSTKEGSRASAMDIQRNVA-------SSSGMMSRNMNEMQMEV 141

Query: 150 QSKLHLQVEAEKHLRIRQDAERRYL-AMLERACKMLADQFIGGAVS 194
           Q +LH Q+E ++HL++R +A+ +Y+ ++LERAC+ LA + +  A +
Sbjct: 142 QRRLHEQLEVQRHLQLRIEAQGKYMQSILERACQTLAGENMAAATA 180

The following BLAST results are available for this feature:

BLAST of Carg07902 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026689.1	1.1e-180	100.00	Protein PHR1-LIKE 2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022926852.1	6.8e-157	100.00	protein PHR1-LIKE 2-like [Cucurbita moschata]	[more]
XP_023518425.1	1.1e-154	98.95	protein PHR1-LIKE 2-like [Cucurbita pepo subsp. pepo]	[more]
KAG6594720.1	3.8e-152	97.89	Protein PHR1-LIKE 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023003570.1	3.0e-149	96.14	protein PHR1-LIKE 2-like [Cucurbita maxima]	[more]

BLAST of Carg07902 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94A57	1.3e-46	49.34	Protein PHR1-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=PHL2 PE=1 SV=1	[more]
Q8LAJ7	3.3e-45	54.89	Protein PHR1-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=PHL3 PE=1 SV=1	[more]
Q9SAK5	1.2e-36	50.60	Myb family transcription factor APL OS=Arabidopsis thaliana OX=3702 GN=APL PE=1 ...	[more]
E5L8F7	6.8e-35	44.98	Myb family transcription factor IPN2 OS=Lotus japonicus OX=34305 GN=IPN2 PE=1 SV...	[more]
Q9SQQ9	8.9e-35	41.77	Myb-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=MYR2 PE=1 SV=1	[more]

BLAST of Carg07902 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EFI1	3.3e-157	100.00	protein PHR1-LIKE 2-like OS=Cucurbita moschata OX=3662 GN=LOC111433839 PE=3 SV=1	[more]
A0A6J1KS45	1.5e-149	96.14	protein PHR1-LIKE 2-like OS=Cucurbita maxima OX=3661 GN=LOC111497132 PE=3 SV=1	[more]
A0A1S4DTK9	1.3e-142	91.93	LOW QUALITY PROTEIN: myb family transcription factor APL-like OS=Cucumis melo OX...	[more]
A0A6J1IL09	1.7e-142	86.97	protein PHR1-LIKE 2-like OS=Cucurbita maxima OX=3661 GN=LOC111478004 PE=3 SV=1	[more]
A0A6J1GGC2	1.7e-142	92.28	protein PHR1-LIKE 2-like OS=Cucurbita moschata OX=3662 GN=LOC111453659 PE=3 SV=1	[more]

BLAST of Carg07902 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24120.1	9.4e-48	49.34	Homeodomain-like superfamily protein	[more]
AT4G13640.1	2.3e-46	54.89	Homeodomain-like superfamily protein	[more]
AT3G24120.2	3.9e-46	48.71	Homeodomain-like superfamily protein	[more]
AT4G13640.2	9.7e-45	54.01	Homeodomain-like superfamily protein	[more]
AT1G79430.2	8.8e-38	50.60	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain	PFAM	PF14379	Myb_CC_LHEQLE	coord: 137..182 e-value: 1.1E-15 score: 57.1
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 45..95 e-value: 4.2E-6 score: 26.8
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 39..99 score: 9.943585
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 42..97 e-value: 7.2E-24 score: 81.9
None	No IPR available	GENE3D	1.10.10.60		coord: 41..99 e-value: 1.7E-29 score: 103.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..261
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..265
None	No IPR available	PANTHER	PTHR31499:SF55	MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 15..285
IPR044848	PHR1-like	PANTHER	PTHR31499	MYB FAMILY TRANSCRIPTION FACTOR PHL11	coord: 15..285
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 42..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07902-RA	Carg07902-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity