
Carg07897 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCAAATTCGCTTTCATCCTGCAACGGTTTCTCTCTCCGGATTCTTTAAAGGTAAAACAAGAAGATCCCCTCTCTTTTTTCTTTCTATTCATCTTCCTTTTCAGCCTTTTTGATGGTGCTTTCTCCTTCCTTTTTCTGCCGTTATTAATGTAATCTTTGTTTAGTTCTCAAAATTTGCTTTCAAGCCCTAATTTTGTATCATGTTATCGCTCGATCGATTGTTTTTCTGTTTTTATGATTGAGAAAGAGGCTGTCATCTCGGATTATTATACCTTACATCTGAATTGTTTGCAATCGTGATTGACATTTCATTTAGAGAATAATTGAATGAGATTGTAATTCGTTCCGTTTATTTTCATTTTGGTTATTATCCAACTCGATTCATTGCTTCGATGTTGTTGATTTGTTGATTTGGGATTTGAGGATTAATTCTAGAGCAATCTGAATCCTGAATAATATCTTTAGATTTTCCATTGATAAATCATGTCAGTTTCATGAAATATTGCTTCCGTTTAGTGTAGAGATGCTGGTGATTGATTGTCATGTTCGTTTTCGCATGAGCTTGTTTCAAAATAATTGTTCAAACATCTTTTTACTAATTCATGGCGCAGGTATGGAGTGTTTTGACATCTGTAAAAGATCATGGTTCAATGCCTAGAGGGAATAAAGCATTTCTGTGCTGCTGTAGCAAACTGTTGTGATGCAGAAACATCTAGGCGACCTAGGGGCCTTCAAGATCCTGAGGCTCTTGCAAGGGAGACAGTATGTATGTTTCTAGAATTGGCCCAATCATCCTTTTGATTTCTTGGCGTGGATATTTTATTCCTTTCATATTCCTTTCAAGGTCTAACTAATGTGTCACATCAAGGATAAATGTGTTGATAAGACCTTCACTCTTTTATTTGGTTGTAAATTTTGGCAGTCATAAGTTGTTTGCTTTCTCTATTGCAGTCAGTGTAAGTGAAATAGAGGCATTGTATGAGCTGTTTAAGAAGATCAGTAGTGCAGTGATTGATGATGGGCTGATAAATAAGGTAACAGCCAGTGGAGAAGGGATTGTTCTGTTCCACTTTACTCTTTAATACAGTGGTTTCAATCATGTTGTAAGACGATAATCTTTTCATGTTTGAACCAGACTTGCTTTTCCTTTGTTTTGACTCTCCCTCTGTATCATACTGCAGGAAGAATTTCAACTGGCACTGTTCAAAACAAACAAAAAAGAGAGCTTATTTGCAGATAGGGTAAACCTTATTGTTTGCAACTGAACCTTTGGTTCTATTTACATACATATCCACTATAACCTGACTGGCCCAGACGACCCTTCATATTTTATTTATTTATTTATTTATTTTGCTTATATTCAATGTCTAGTTTCTGTATTTAAATGATTGAAATTGAGGTATCTAATCATACAATTTTGTGAATAAAGTCTTATGCAGTGTGATAACTAGTGCATTCTCTGGACTAGTTTCCTTTTGAATGCATGCATTTGTGTCACTGTAGTTAGCATCTTACTGAAACGTGGCTGCGTATATTTGGTTCAATTAGATATAAGAGTTAAGAAAACAATTCTAGTTTCTATTCTAATCAGATTCTTTCTATTTGTTTGTATGGGGATTGGGTTTGTTCTTCATGAGAAGTGGTGTATGGCATTGTTTTAGCACACTATTATCTCTTTCAAATATCTGCTGTTTTGGTAAAAATTATTGCATTCATATTCTAGCTTATTGCTAGTTTTTACTACTAACGACTTTTGTAATGCATCTGTGTAGGTTTTTGACCTGTTTGATACAAAGCACAATGGAATACTCGATTTTGAAGAATTTGCACGTGCTCTTTCCGTCTTTCATCCAAATGCCCCTATTGATGATAAAATCGAGTGTAAGTTTTCTTTTTGTTGTTAATTTTCTCACGTCCATCCACCAAGAAAAATGGCACAGCTGTTGTCTGTCTTTGATACATGGTGTGATCAAAATATTTTGGGCATGGGTGAATGCCTTCGATTTCGTACAATCCATTGGAAAAGAAAAAAAAAAAAGAAAAAACTAATTGGTGGTGCTACAGATACTGGAATTGATTTTTTGGTGTTAGCTTTCCTTATCACTCTAGTCTTGTATTTTAAGTTAGCATGTGATCTCATGTTTTTAATAATTTGCAGTTTCATTCCAATTATATGATCTTAAACAGCAAGGATTCATTGAGAGACAGGAGGTAACTTCTCCAATACATTCTCTATTTCTATTTGATCAATTACCTTGCATGGATGCTGACCATTTAAAGACTTATTATTATAGCAGCTGCCCTTTTTAATTGATGATCTTTTCTGAACATTTACACGGATGATACCAATGATCTTTAAAGACTATCAAGGATCTATTAGATAAAGATGTTACAGAATCTTTTTACGAAATCCAATTTCTAATTCTTCTTGTACACCTGCTATCTTTTTATCAAGGATCTATATTACCAGTACTATTGTAGTATTTTATATGATAAAATGTTTGTGTAGGTAAAGCAAATGGTTGTGGCTACGCTTGCTGAATCTGGCATGAATCTATCGGATGATGTTATAGAAAGTATCATTGACAAGGTTCTCTTCGTAATCTGATCACGTCTGTTAGTTAGTCTTTTCTGGTTAACTTTCAGTTGTCCAGGACATCTGCTGAACTTAAAACTGGATGTCTCCTTGACTATGCAGACATTCGAAGAAGCTGACACAAAACATGACGGGAAGATCGACAAGGAAGAGTGGCGAAACCTTGTATCAAGGCATCCATCACTTTTGAAGAACATGACTCTCCAATATCTCAAGTGAGTGAGCTGCATTTTCTGTCATTGTTCATTCCCAACCTCATCATCCTATTGATTGTTCATTCGCTCCCTGAGTGATTGATTGTATTGCTAAGTAAGTTGATGATGTACTTTGTGTTTGTGTGGGCAGGGATATCACGACCACGTTCCCAAGTTTTGTGTTTCACTCGCAAGTTGATGATACCTGAGAAGTCTGTCACAATGCAATGGCTGTTCGATTTGAGTTTGATTGATATTTTCTTCTTTCTTTCTAAGTACAAATTGTGGTTAGGTTTATGAACTATAATCTGTGTTTTTGGTTCTTAATACTTTCATTTGTTTCTTCTTTTTTTAAACCCATCGGTTCAATGTCCAAAGATTATCTTTACCCTCTA TCAAATTCGCTTTCATCCTGCAACGGTTTCTCTCTCCGGATTCTTTAAAGGTATGGAGTGTTTTGACATCTGTAAAAGATCATGGTTCAATGCCTAGAGGGAATAAAGCATTTCTGTGCTGCTGTAGCAAACTGTTGTGATGCAGAAACATCTAGGCGACCTAGGGGCCTTCAAGATCCTGAGGCTCTTGCAAGGGAGACAGTATTCAGTGTAAGTGAAATAGAGGCATTGTATGAGCTGTTTAAGAAGATCAGTAGTGCAGTGATTGATGATGGGCTGATAAATAAGGAAGAATTTCAACTGGCACTGTTCAAAACAAACAAAAAAGAGAGCTTATTTGCAGATAGGGTTTTTGACCTGTTTGATACAAAGCACAATGGAATACTCGATTTTGAAGAATTTGCACGTGCTCTTTCCGTCTTTCATCCAAATGCCCCTATTGATGATAAAATCGAGTTTTCATTCCAATTATATGATCTTAAACAGCAAGGATTCATTGAGAGACAGGAGGTAAAGCAAATGGTTGTGGCTACGCTTGCTGAATCTGGCATGAATCTATCGGATGATGTTATAGAAAGTATCATTGACAAGACATTCGAAGAAGCTGACACAAAACATGACGGGAAGATCGACAAGGAAGAGTGGCGAAACCTTGTATCAAGGCATCCATCACTTTTGAAGAACATGACTCTCCAATATCTCAAGGATATCACGACCACGTTCCCAAGTTTTGTGTTTCACTCGCAAGTTGATGATACCTGAGAAGTCTGTCACAATGCAATGGCTGTTCGATTTGAGTTTGATTGATATTTTCTTCTTTCTTTCTAAGTACAAATTGTGGTTAGGTTTATGAACTATAATCTGTGTTTTTGGTTCTTAATACTTTCATTTGTTTCTTCTTTTTTTAAACCCATCGGTTCAATGTCCAAAGATTATCTTTACCCTCTA ATGGTTCAATGCCTAGAGGGAATAAAGCATTTCTGTGCTGCTGTAGCAAACTGTTGTGATGCAGAAACATCTAGGCGACCTAGGGGCCTTCAAGATCCTGAGGCTCTTGCAAGGGAGACAGTATTCAGTGTAAGTGAAATAGAGGCATTGTATGAGCTGTTTAAGAAGATCAGTAGTGCAGTGATTGATGATGGGCTGATAAATAAGGAAGAATTTCAACTGGCACTGTTCAAAACAAACAAAAAAGAGAGCTTATTTGCAGATAGGGTTTTTGACCTGTTTGATACAAAGCACAATGGAATACTCGATTTTGAAGAATTTGCACGTGCTCTTTCCGTCTTTCATCCAAATGCCCCTATTGATGATAAAATCGAGTTTTCATTCCAATTATATGATCTTAAACAGCAAGGATTCATTGAGAGACAGGAGGTAAAGCAAATGGTTGTGGCTACGCTTGCTGAATCTGGCATGAATCTATCGGATGATGTTATAGAAAGTATCATTGACAAGACATTCGAAGAAGCTGACACAAAACATGACGGGAAGATCGACAAGGAAGAGTGGCGAAACCTTGTATCAAGGCATCCATCACTTTTGAAGAACATGACTCTCCAATATCTCAAGGATATCACGACCACGTTCCCAAGTTTTGTGTTTCACTCGCAAGTTGATGATACCTGA MVQCLEGIKHFCAAVANCCDAETSRRPRGLQDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVSRHPSLLKNMTLQYLKDITTTFPSFVFHSQVDDT Homology
BLAST of Carg07897 vs. NCBI nr
Match: XP_022926969.1 (calcineurin B-like protein 3 [Cucurbita moschata] >XP_022926971.1 calcineurin B-like protein 3 [Cucurbita moschata] >XP_022926972.1 calcineurin B-like protein 3 [Cucurbita moschata] >KAG6594715.1 Calcineurin B-like protein 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026684.1 Calcineurin B-like protein 3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 447.2 bits (1149), Expect = 8.4e-122 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0
BLAST of Carg07897 vs. NCBI nr
Match: XP_023003379.1 (calcineurin B-like protein 3 [Cucurbita maxima] >XP_023003380.1 calcineurin B-like protein 3 [Cucurbita maxima] >XP_023003381.1 calcineurin B-like protein 3 [Cucurbita maxima]) HSP 1 Score: 446.0 bits (1146), Expect = 1.9e-121 Identity = 225/226 (99.56%), Postives = 226/226 (100.00%), Query Frame = 0
BLAST of Carg07897 vs. NCBI nr
Match: XP_023517180.1 (calcineurin B-like protein 3 [Cucurbita pepo subsp. pepo] >XP_023517181.1 calcineurin B-like protein 3 [Cucurbita pepo subsp. pepo] >XP_023517182.1 calcineurin B-like protein 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 445.7 bits (1145), Expect = 2.4e-121 Identity = 225/226 (99.56%), Postives = 226/226 (100.00%), Query Frame = 0
BLAST of Carg07897 vs. NCBI nr
Match: XP_022950822.1 (calcineurin B-like protein 3 [Cucurbita moschata] >XP_022950823.1 calcineurin B-like protein 3 [Cucurbita moschata] >XP_022950824.1 calcineurin B-like protein 3 [Cucurbita moschata] >XP_023544935.1 calcineurin B-like protein 3 [Cucurbita pepo subsp. pepo] >XP_023544936.1 calcineurin B-like protein 3 [Cucurbita pepo subsp. pepo] >XP_023544937.1 calcineurin B-like protein 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 440.7 bits (1132), Expect = 7.9e-120 Identity = 222/226 (98.23%), Postives = 224/226 (99.12%), Query Frame = 0
BLAST of Carg07897 vs. NCBI nr
Match: XP_008440962.1 (PREDICTED: calcineurin B-like protein 3 [Cucumis melo] >XP_008440963.1 PREDICTED: calcineurin B-like protein 3 [Cucumis melo] >XP_008440964.1 PREDICTED: calcineurin B-like protein 3 [Cucumis melo]) HSP 1 Score: 440.7 bits (1132), Expect = 7.9e-120 Identity = 221/226 (97.79%), Postives = 225/226 (99.56%), Query Frame = 0
BLAST of Carg07897 vs. ExPASy Swiss-Prot
Match: Q75LU8 (Calcineurin B-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CBL3 PE=1 SV=1) HSP 1 Score: 402.9 bits (1034), Expect = 2.4e-111 Identity = 201/226 (88.94%), Postives = 214/226 (94.69%), Query Frame = 0
BLAST of Carg07897 vs. ExPASy Swiss-Prot
Match: Q3HRP5 (Calcineurin B-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CBL2 PE=2 SV=1) HSP 1 Score: 394.0 bits (1011), Expect = 1.1e-108 Identity = 196/226 (86.73%), Postives = 214/226 (94.69%), Query Frame = 0
BLAST of Carg07897 vs. ExPASy Swiss-Prot
Match: Q8LAS7 (Calcineurin B-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CBL2 PE=1 SV=2) HSP 1 Score: 391.0 bits (1003), Expect = 9.4e-108 Identity = 198/226 (87.61%), Postives = 207/226 (91.59%), Query Frame = 0
BLAST of Carg07897 vs. ExPASy Swiss-Prot
Match: Q8LEM7 (Calcineurin B-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=CBL3 PE=1 SV=2) HSP 1 Score: 390.2 bits (1001), Expect = 1.6e-107 Identity = 196/226 (86.73%), Postives = 209/226 (92.48%), Query Frame = 0
BLAST of Carg07897 vs. ExPASy Swiss-Prot
Match: Q3HRP1 (Calcineurin B-like protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CBL6 PE=2 SV=1) HSP 1 Score: 379.4 bits (973), Expect = 2.8e-104 Identity = 187/225 (83.11%), Postives = 207/225 (92.00%), Query Frame = 0
BLAST of Carg07897 vs. ExPASy TrEMBL
Match: A0A6J1EGD6 (calcineurin B-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111433927 PE=4 SV=1) HSP 1 Score: 447.2 bits (1149), Expect = 4.1e-122 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0
BLAST of Carg07897 vs. ExPASy TrEMBL
Match: A0A6J1KRL6 (calcineurin B-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111497003 PE=4 SV=1) HSP 1 Score: 446.0 bits (1146), Expect = 9.1e-122 Identity = 225/226 (99.56%), Postives = 226/226 (100.00%), Query Frame = 0
BLAST of Carg07897 vs. ExPASy TrEMBL
Match: A0A1S3B337 (calcineurin B-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103485217 PE=4 SV=1) HSP 1 Score: 440.7 bits (1132), Expect = 3.8e-120 Identity = 221/226 (97.79%), Postives = 225/226 (99.56%), Query Frame = 0
BLAST of Carg07897 vs. ExPASy TrEMBL
Match: A0A6J1GGZ3 (calcineurin B-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111453812 PE=4 SV=1) HSP 1 Score: 440.7 bits (1132), Expect = 3.8e-120 Identity = 222/226 (98.23%), Postives = 224/226 (99.12%), Query Frame = 0
BLAST of Carg07897 vs. ExPASy TrEMBL
Match: A0A6J1IUB4 (calcineurin B-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111478658 PE=4 SV=1) HSP 1 Score: 440.3 bits (1131), Expect = 5.0e-120 Identity = 222/226 (98.23%), Postives = 224/226 (99.12%), Query Frame = 0
BLAST of Carg07897 vs. TAIR 10
Match: AT5G55990.1 (calcineurin B-like protein 2 ) HSP 1 Score: 391.0 bits (1003), Expect = 6.7e-109 Identity = 198/226 (87.61%), Postives = 207/226 (91.59%), Query Frame = 0
BLAST of Carg07897 vs. TAIR 10
Match: AT4G26570.1 (calcineurin B-like 3 ) HSP 1 Score: 390.2 bits (1001), Expect = 1.1e-108 Identity = 196/226 (86.73%), Postives = 209/226 (92.48%), Query Frame = 0
BLAST of Carg07897 vs. TAIR 10
Match: AT4G26570.2 (calcineurin B-like 3 ) HSP 1 Score: 384.4 bits (986), Expect = 6.2e-107 Identity = 196/230 (85.22%), Postives = 209/230 (90.87%), Query Frame = 0
BLAST of Carg07897 vs. TAIR 10
Match: AT4G16350.1 (calcineurin B-like protein 6 ) HSP 1 Score: 315.1 bits (806), Expect = 4.6e-86 Identity = 162/226 (71.68%), Postives = 189/226 (83.63%), Query Frame = 0
BLAST of Carg07897 vs. TAIR 10
Match: AT4G17615.1 (calcineurin B-like protein 1 ) HSP 1 Score: 276.9 bits (707), Expect = 1.4e-74 Identity = 132/208 (63.46%), Postives = 173/208 (83.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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