Carg07800 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07800
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	sp110 nuclear body protein-like
Location	Carg_Chr07: 1227552 .. 1228430 (-)
RNA-Seq Expression	Carg07800
Synteny	Carg07800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTGCTGCGTTAGTTCGGGGAAATCGTCAAGTTCAGCTCATAAATTCGATGCGGCAGCCGCTGGTAAGATATTTGGGCCGTTAACTGACAACGGAAGCAGAGAGCCGCCGTCTTCCATGGAGGAAGAGACAGTCAAAGAAGTTCTCTCTGAAACGCATGCTCTGAAACCACTGCCAATTTCGCCACCGTTGAAGAGTTGCCCACCGGAAGAGGATGAAGCCCAAAAACCTGTTGGAGATAAGGTCACCTATGAGATCGAGAAGAAGCTTCCTGAAATTCCCATTAATGGAATTGTACAACAGGCTTCTGAGTTCGATGAAATTTCCAACCCTGACAAGTTTTTCGCCACCGCCAATTTCACCGATATAATGGACGGCGGTGAAGAGGTTCATCAAATGGTCTTGAAAGCACTGCCGACAAATCAATCAATTCCCGGGGAAGTTGGGTTGAAAAGAAAATTGTCACCGAACAAGACACTTAACCGGAGATCAGACCAGTCGCCGGTCCGACGAAACAGCTTTGTTGGGTCCGCGAGATTGGTTCAGAAAAGAGACGCAAGTCCAGCAATGACGCATCGAGGATTGAGGACGGAGCCTACTCAGAAAGACCCAGATGAGAATTTCGGCAGGAGATCCCGGTCCCCAGCCACCGCACGTTTCGACAGCGGAGGGTCTAGATCCGCCCTGGGGCGGACCCCATCTGTGAGAAAATCCGGTAAATCATCGCCGCTTCGCACGCCAACAGCAATAACACAAGCACCGGCGACCAGTCGAAAAGTAGTAGAAGAAAACAATATCACTGAGGGAAATATGATCACTCAGATTGAGTCACTAGAAAACCCACTGGTTTCCTTGGAGTGCTTCATCTTCCTCTAA

mRNA sequence

ATGGGTTGCTGCGTTAGTTCGGGGAAATCGTCAAGTTCAGCTCATAAATTCGATGCGGCAGCCGCTGGTAAGATATTTGGGCCGTTAACTGACAACGGAAGCAGAGAGCCGCCGTCTTCCATGGAGGAAGAGACAGTCAAAGAAGTTCTCTCTGAAACGCATGCTCTGAAACCACTGCCAATTTCGCCACCGTTGAAGAGTTGCCCACCGGAAGAGGATGAAGCCCAAAAACCTGTTGGAGATAAGGTCACCTATGAGATCGAGAAGAAGCTTCCTGAAATTCCCATTAATGGAATTGTACAACAGGCTTCTGAGTTCGATGAAATTTCCAACCCTGACAAGTTTTTCGCCACCGCCAATTTCACCGATATAATGGACGGCGGTGAAGAGGTTCATCAAATGGTCTTGAAAGCACTGCCGACAAATCAATCAATTCCCGGGGAAGTTGGGTTGAAAAGAAAATTGTCACCGAACAAGACACTTAACCGGAGATCAGACCAGTCGCCGGTCCGACGAAACAGCTTTGTTGGGTCCGCGAGATTGGTTCAGAAAAGAGACGCAAGTCCAGCAATGACGCATCGAGGATTGAGGACGGAGCCTACTCAGAAAGACCCAGATGAGAATTTCGGCAGGAGATCCCGGTCCCCAGCCACCGCACGTTTCGACAGCGGAGGGTCTAGATCCGCCCTGGGGCGGACCCCATCTGTGAGAAAATCCGGTAAATCATCGCCGCTTCGCACGCCAACAGCAATAACACAAGCACCGGCGACCAGTCGAAAAGTAGTAGAAGAAAACAATATCACTGAGGGAAATATGATCACTCAGATTGAGTCACTAGAAAACCCACTGGTTTCCTTGGAGTGCTTCATCTTCCTCTAA

Coding sequence (CDS)

ATGGGTTGCTGCGTTAGTTCGGGGAAATCGTCAAGTTCAGCTCATAAATTCGATGCGGCAGCCGCTGGTAAGATATTTGGGCCGTTAACTGACAACGGAAGCAGAGAGCCGCCGTCTTCCATGGAGGAAGAGACAGTCAAAGAAGTTCTCTCTGAAACGCATGCTCTGAAACCACTGCCAATTTCGCCACCGTTGAAGAGTTGCCCACCGGAAGAGGATGAAGCCCAAAAACCTGTTGGAGATAAGGTCACCTATGAGATCGAGAAGAAGCTTCCTGAAATTCCCATTAATGGAATTGTACAACAGGCTTCTGAGTTCGATGAAATTTCCAACCCTGACAAGTTTTTCGCCACCGCCAATTTCACCGATATAATGGACGGCGGTGAAGAGGTTCATCAAATGGTCTTGAAAGCACTGCCGACAAATCAATCAATTCCCGGGGAAGTTGGGTTGAAAAGAAAATTGTCACCGAACAAGACACTTAACCGGAGATCAGACCAGTCGCCGGTCCGACGAAACAGCTTTGTTGGGTCCGCGAGATTGGTTCAGAAAAGAGACGCAAGTCCAGCAATGACGCATCGAGGATTGAGGACGGAGCCTACTCAGAAAGACCCAGATGAGAATTTCGGCAGGAGATCCCGGTCCCCAGCCACCGCACGTTTCGACAGCGGAGGGTCTAGATCCGCCCTGGGGCGGACCCCATCTGTGAGAAAATCCGGTAAATCATCGCCGCTTCGCACGCCAACAGCAATAACACAAGCACCGGCGACCAGTCGAAAAGTAGTAGAAGAAAACAATATCACTGAGGGAAATATGATCACTCAGATTGAGTCACTAGAAAACCCACTGGTTTCCTTGGAGTGCTTCATCTTCCTCTAA

Protein sequence

MGCCVSSGKSSSSAHKFDAAAAGKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLPISPPLKSCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQASEFDEISNPDKFFATANFTDIMDGGEEVHQMVLKALPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPVRRNSFVGSARLVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSALGRTPSVRKSGKSSPLRTPTAITQAPATSRKVVEENNITEGNMITQIESLENPLVSLECFIFL

Homology

[Close]

BLAST of Carg07800 vs. NCBI nr
Match: KAG7026590.1 (hypothetical protein SDJN02_10592, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 560.8 bits (1444), Expect = 6.7e-156
Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0


Query: 1   MGCCVSSGKSSSSAHKFDAAAAGKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLP 60
           MGCCVSSGKSSSSAHKFDAAAAGKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLP
Sbjct: 1   MGCCVSSGKSSSSAHKFDAAAAGKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLP 60

Query: 61  ISPPLKSCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQASEFDEISNPDKFFATAN 120
           ISPPLKSCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQASEFDEISNPDKFFATAN
Sbjct: 61  ISPPLKSCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQASEFDEISNPDKFFATAN 120

Query: 121 FTDIMDGGEEVHQMVLKALPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPVRRNSFVGSAR 180
           FTDIMDGGEEVHQMVLKALPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPVRRNSFVGSAR
Sbjct: 121 FTDIMDGGEEVHQMVLKALPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPVRRNSFVGSAR 180

Query: 181 LVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSALGRTPSVRKSG 240
           LVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSALGRTPSVRKSG
Sbjct: 181 LVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSALGRTPSVRKSG 240

Query: 241 KSSPLRTPTAITQAPATSRKVVEENNITEGNMITQIESLENPLVSLECFIFL 293
           KSSPLRTPTAITQAPATSRKVVEENNITEGNMITQIESLENPLVSLECFIFL
Sbjct: 241 KSSPLRTPTAITQAPATSRKVVEENNITEGNMITQIESLENPLVSLECFIFL 292

[Close]

BLAST of Carg07800 vs. NCBI nr
Match: KAG6594621.1 (hypothetical protein SDJN03_11174, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 556.2 bits (1432), Expect = 1.7e-154
Identity = 289/292 (98.97%), Postives = 291/292 (99.66%), Query Frame = 0


Query: 1   MGCCVSSGKSSSSAHKFDAAAAGKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLP 60
           MGCCVSSGKSSSSAHKFDAAAAGKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLP
Sbjct: 1   MGCCVSSGKSSSSAHKFDAAAAGKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLP 60

Query: 61  ISPPLKSCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQASEFDEISNPDKFFATAN 120
           ISPPLKSCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQASEFDEISNPDKFFATAN
Sbjct: 61  ISPPLKSCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQASEFDEISNPDKFFATAN 120

Query: 121 FTDIMDGGEEVHQMVLKALPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPVRRNSFVGSAR 180
           FTDIMDGGEEVHQMVLKALPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPVRRNSFVGSAR
Sbjct: 121 FTDIMDGGEEVHQMVLKALPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPVRRNSFVGSAR 180

Query: 181 LVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSALGRTPSVRKSG 240
           LVQK+DASPAMTHRGLRTEPT KDPDENFGRRSRSPATARFDSGGSRSALGRTPSVRKSG
Sbjct: 181 LVQKKDASPAMTHRGLRTEPTPKDPDENFGRRSRSPATARFDSGGSRSALGRTPSVRKSG 240

Query: 241 KSSPLRTPTAITQAPATSRKVVEENNITEGNMITQIESLENPLVSLECFIFL 293
           KSSPLRTPTAITQAPATSRKVVEENNIT+GNMITQIESLENPLVSLECFIFL
Sbjct: 241 KSSPLRTPTAITQAPATSRKVVEENNITDGNMITQIESLENPLVSLECFIFL 292

[Close]

BLAST of Carg07800 vs. NCBI nr
Match: XP_022926404.1 (uncharacterized protein LOC111433567 [Cucurbita moschata])

HSP 1 Score: 550.8 bits (1418), Expect = 7.0e-153
Identity = 287/292 (98.29%), Postives = 289/292 (98.97%), Query Frame = 0


Query: 1   MGCCVSSGKSSSSAHKFDAAAAGKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLP 60
           MGCCVSSGKSSSSAHKFDAAAA KIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPL 
Sbjct: 1   MGCCVSSGKSSSSAHKFDAAAADKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLA 60

Query: 61  ISPPLKSCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQASEFDEISNPDKFFATAN 120
           ISPPLK+CPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQ SEFDEISNPDKFFATAN
Sbjct: 61  ISPPLKNCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQPSEFDEISNPDKFFATAN 120

Query: 121 FTDIMDGGEEVHQMVLKALPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPVRRNSFVGSAR 180
           FTDIMDGGEEVHQMVLKALPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPVRRNSFVGSAR
Sbjct: 121 FTDIMDGGEEVHQMVLKALPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPVRRNSFVGSAR 180

Query: 181 LVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSALGRTPSVRKSG 240
           LVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSALGRTPSVRKSG
Sbjct: 181 LVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSALGRTPSVRKSG 240

Query: 241 KSSPLRTPTAITQAPATSRKVVEENNITEGNMITQIESLENPLVSLECFIFL 293
           KSSPLRTPTAITQAPATSRKVVEENNIT+GNMITQIESLENPLVSLECFIFL
Sbjct: 241 KSSPLRTPTAITQAPATSRKVVEENNITDGNMITQIESLENPLVSLECFIFL 292

[Close]

BLAST of Carg07800 vs. NCBI nr
Match: XP_023518159.1 (uncharacterized protein LOC111781703 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 533.5 bits (1373), Expect = 1.2e-147
Identity = 278/287 (96.86%), Postives = 281/287 (97.91%), Query Frame = 0


Query: 1   MGCCVSSGKSSSSAHKFDAAAAGKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLP 60
           MGCCVSSGKSSSSAHKFDAAAAGKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPL 
Sbjct: 1   MGCCVSSGKSSSSAHKFDAAAAGKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLQ 60

Query: 61  ISPPLKSCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQASEFDEISNPDKFFATAN 120
           ISPPLK+CPPEEDEAQKPVGDKVTYEIEKKLPEIPINGI QQASEFDEISNPDKFFATAN
Sbjct: 61  ISPPLKNCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIAQQASEFDEISNPDKFFATAN 120

Query: 121 FTDIMDGGEEVHQMVLKALPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPVRRNSFVGSAR 180
           FTD MDGGEEVHQMVLKALPTNQSIPG+VGLKRKLSPNKTLNRRSDQSPVRRNSFVGSAR
Sbjct: 121 FTDTMDGGEEVHQMVLKALPTNQSIPGDVGLKRKLSPNKTLNRRSDQSPVRRNSFVGSAR 180

Query: 181 LVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSALGRTPSVRKSG 240
           LVQKRDASPAMTHRGLRTEPTQKDPDEN GRRSRSPATARFD GGSRSALGRTPSVRKSG
Sbjct: 181 LVQKRDASPAMTHRGLRTEPTQKDPDENLGRRSRSPATARFDGGGSRSALGRTPSVRKSG 240

Query: 241 KSSPLRTPTAITQAPATSRKVVEENNITEGNMITQIESLENPLVSLE 288
           KSSPLRTPTAITQA ATSRKVVEENNIT+GNMITQIESLENPLVSLE
Sbjct: 241 KSSPLRTPTAITQAQATSRKVVEENNITDGNMITQIESLENPLVSLE 287

[Close]

BLAST of Carg07800 vs. NCBI nr
Match: XP_038882208.1 (uncharacterized protein LOC120073430 [Benincasa hispida])

HSP 1 Score: 308.9 bits (790), Expect = 4.6e-80
Identity = 188/298 (63.09%), Postives = 219/298 (73.49%), Query Frame = 0


Query: 1   MGCCVSSGKSSSSAHKFDAAAAGKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLP 60
           MGCC+SSGKS +S +KF            +DNGSR+PPSSMEEETVKEVLSET +LKP P
Sbjct: 1   MGCCLSSGKSFNSPNKFHRN---------SDNGSRDPPSSMEEETVKEVLSETPSLKP-P 60

Query: 61  ISPPLKSCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQASEFDEISNPDKFF--AT 120
            SPP K+ PPEED+  KPVG+    EIEKKL EI INGI +  SEF EIS+P++    +T
Sbjct: 61  PSPPKKNSPPEEDQVLKPVGN----EIEKKLCEISINGIAELPSEFYEISHPNECISVST 120

Query: 121 ANFTDIMDGGEEVHQMVLKA----LPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPVRRNS 180
           A  T+ MDGG E+HQMVLK+    LP +QSI G+  +KR++S N+TL RRSDQSPVRRN 
Sbjct: 121 AITTEQMDGGGEIHQMVLKSSPVKLPKDQSISGDFEVKREISQNRTLTRRSDQSPVRRNG 180

Query: 181 FVGSARLVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSALGRTP 240
            +GS R+V  RD +PAM  R LR EP ++DPDEN  RRSRSPATAR D  GSRSAL RTP
Sbjct: 181 AIGSMRMVHNRDMNPAMARRVLRAEPPRRDPDENSIRRSRSPATARSDGVGSRSALSRTP 240

Query: 241 SVRKSGKSSPLRTPTAITQAPATSRKVVEENNITEGNMITQIESLENPLVSLECFIFL 293
           SVRKSGKSSP R  T      ATS+KVVEENNI +G   +QIESLENPLVSLECFIFL
Sbjct: 241 SVRKSGKSSPNRAAT------ATSQKVVEENNIIDGKFNSQIESLENPLVSLECFIFL 278

[Close]

BLAST of Carg07800 vs. ExPASy TrEMBL
Match: A0A6J1EF08 (uncharacterized protein LOC111433567 OS=Cucurbita moschata OX=3662 GN=LOC111433567 PE=4 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 3.4e-153
Identity = 287/292 (98.29%), Postives = 289/292 (98.97%), Query Frame = 0


Query: 1   MGCCVSSGKSSSSAHKFDAAAAGKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLP 60
           MGCCVSSGKSSSSAHKFDAAAA KIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPL 
Sbjct: 1   MGCCVSSGKSSSSAHKFDAAAADKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLA 60

Query: 61  ISPPLKSCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQASEFDEISNPDKFFATAN 120
           ISPPLK+CPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQ SEFDEISNPDKFFATAN
Sbjct: 61  ISPPLKNCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQPSEFDEISNPDKFFATAN 120

Query: 121 FTDIMDGGEEVHQMVLKALPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPVRRNSFVGSAR 180
           FTDIMDGGEEVHQMVLKALPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPVRRNSFVGSAR
Sbjct: 121 FTDIMDGGEEVHQMVLKALPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPVRRNSFVGSAR 180

Query: 181 LVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSALGRTPSVRKSG 240
           LVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSALGRTPSVRKSG
Sbjct: 181 LVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSALGRTPSVRKSG 240

Query: 241 KSSPLRTPTAITQAPATSRKVVEENNITEGNMITQIESLENPLVSLECFIFL 293
           KSSPLRTPTAITQAPATSRKVVEENNIT+GNMITQIESLENPLVSLECFIFL
Sbjct: 241 KSSPLRTPTAITQAPATSRKVVEENNITDGNMITQIESLENPLVSLECFIFL 292

[Close]

BLAST of Carg07800 vs. ExPASy TrEMBL
Match: A0A5D3CNI1 (Putative BEST plant protein match is: (TAIR:plant.1) protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007250 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 1.2e-78
Identity = 183/298 (61.41%), Postives = 211/298 (70.81%), Query Frame = 0


Query: 1   MGCCVSSGKSSSSAHKFDAAAAGKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLP 60
           MGCC+SS +S +S +KF          P + N +R+PPSSMEEETVKEVLSET ALKP  
Sbjct: 1   MGCCLSSSQSFNSPNKFH---------PSSVNANRDPPSSMEEETVKEVLSETPALKP-- 60

Query: 61  ISPPLKSCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQASEFDEISNPDKFF--AT 120
             PP K+CPPEEDE  KP+GD    E EKKL EIPINGI +Q SEF EIS+ +K    + 
Sbjct: 61  --PPNKNCPPEEDEFHKPLGD----ETEKKLSEIPINGIPEQPSEFYEISHMNKCISVSA 120

Query: 121 ANFTDIMDGGEEVHQMVLKALPT----NQSIPGEVGLKRKLSPNKTLNRRSDQSPVRRNS 180
           A FTD  DGG EVHQ  LK+ P     NQS+  +V LKR++  ++TL RRSDQSPVRRN 
Sbjct: 121 ATFTDQADGGGEVHQTGLKSSPVKLTKNQSVSSDVELKREIPQSRTLTRRSDQSPVRRNG 180

Query: 181 FVGSARLVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSALGRTP 240
            VGS R+V  RD SPAM  RGLR EP ++DPDEN  RRS+SP+TA  DS G RSAL RTP
Sbjct: 181 AVGSMRMVHNRDMSPAMARRGLRAEPPRRDPDENSSRRSQSPSTAPSDSAGYRSALSRTP 240

Query: 241 SVRKSGKSSPLRTPTAITQAPATSRKVVEENNITEGNMITQIESLENPLVSLECFIFL 293
           S RKSGKSSP+R  T      ATS+KVVEENNI +G   TQIESLENPLVSLECFIFL
Sbjct: 241 STRKSGKSSPIRAMT------ATSQKVVEENNIVDGKFNTQIESLENPLVSLECFIFL 275

[Close]

BLAST of Carg07800 vs. ExPASy TrEMBL
Match: A0A1S3B2L5 (uncharacterized protein LOC103485312 OS=Cucumis melo OX=3656 GN=LOC103485312 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 1.2e-78
Identity = 183/298 (61.41%), Postives = 211/298 (70.81%), Query Frame = 0


Query: 1   MGCCVSSGKSSSSAHKFDAAAAGKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLP 60
           MGCC+SS +S +S +KF          P + N +R+PPSSMEEETVKEVLSET ALKP  
Sbjct: 1   MGCCLSSSQSFNSPNKFH---------PSSVNANRDPPSSMEEETVKEVLSETPALKP-- 60

Query: 61  ISPPLKSCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQASEFDEISNPDKFF--AT 120
             PP K+CPPEEDE  KP+GD    E EKKL EIPINGI +Q SEF EIS+ +K    + 
Sbjct: 61  --PPNKNCPPEEDEFHKPLGD----ETEKKLSEIPINGIPEQPSEFYEISHMNKCISVSA 120

Query: 121 ANFTDIMDGGEEVHQMVLKALPT----NQSIPGEVGLKRKLSPNKTLNRRSDQSPVRRNS 180
           A FTD  DGG EVHQ  LK+ P     NQS+  +V LKR++  ++TL RRSDQSPVRRN 
Sbjct: 121 ATFTDQADGGGEVHQTGLKSSPVKLTKNQSVSSDVELKREIPQSRTLTRRSDQSPVRRNG 180

Query: 181 FVGSARLVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSALGRTP 240
            VGS R+V  RD SPAM  RGLR EP ++DPDEN  RRS+SP+TA  DS G RSAL RTP
Sbjct: 181 AVGSMRMVHNRDMSPAMARRGLRAEPPRRDPDENSSRRSQSPSTAPSDSAGYRSALSRTP 240

Query: 241 SVRKSGKSSPLRTPTAITQAPATSRKVVEENNITEGNMITQIESLENPLVSLECFIFL 293
           S RKSGKSSP+R  T      ATS+KVVEENNI +G   TQIESLENPLVSLECFIFL
Sbjct: 241 STRKSGKSSPIRAMT------ATSQKVVEENNIVDGKFNTQIESLENPLVSLECFIFL 275

[Close]

BLAST of Carg07800 vs. ExPASy TrEMBL
Match: A0A0A0KLE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517100 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 2.6e-76
Identity = 182/298 (61.07%), Postives = 209/298 (70.13%), Query Frame = 0


Query: 1   MGCCVSSGKSSSSAHKFDAAAAGKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLP 60
           MGCC+SS +S SS +KF + +          N SR+PPSSMEEETVKEVLSET ALKP  
Sbjct: 1   MGCCLSSTQSFSSPNKFHSNSV---------NVSRDPPSSMEEETVKEVLSETPALKP-- 60

Query: 61  ISPPLKSCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQASEFDEISNPDKFF--AT 120
             P   +  PE+DE +KP+GD    EIEKKL EIPINGI +Q SEF EIS+ +K    + 
Sbjct: 61  --PQKNNSAPEQDEFRKPLGD----EIEKKLSEIPINGIPEQPSEFYEISHMNKCISVSA 120

Query: 121 ANFTDIMDGGEEVHQMVLKALPT----NQSIPGEVGLKRKLSPNKTLNRRSDQSPVRRNS 180
           A FTD  DGG EVHQ VLK+ P     NQS+  +V LKR++  ++TL RRSDQSPVRRN 
Sbjct: 121 ATFTDQTDGGGEVHQTVLKSSPVKLTKNQSVSSDVELKREIQQSRTLTRRSDQSPVRRNG 180

Query: 181 FVGSARLVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSALGRTP 240
            VGS R+V  RD SPAM  RGLR EP ++DPDEN  RRS SP+TAR DS G RSAL RTP
Sbjct: 181 AVGSIRMVHNRDMSPAMARRGLRAEPPRRDPDENSSRRSHSPSTARSDSAGYRSALSRTP 240

Query: 241 SVRKSGKSSPLRTPTAITQAPATSRKVVEENNITEGNMITQIESLENPLVSLECFIFL 293
           S RKSGKSSP      IT   ATS+KVVEENNI +G   TQIESLENPLVSLECFIFL
Sbjct: 241 SARKSGKSSP------ITAMTATSQKVVEENNIVDGKFNTQIESLENPLVSLECFIFL 275

[Close]

BLAST of Carg07800 vs. ExPASy TrEMBL
Match: A0A6J1CMA7 (uncharacterized protein LOC111012433 OS=Momordica charantia OX=3673 GN=LOC111012433 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 3.4e-44
Identity = 119/196 (60.71%), Postives = 135/196 (68.88%), Query Frame = 0


Query: 1   MGCCVSSGKSSSSAHKFD---AAAAGKIFGPLTDNGSREPPSSMEEETVKEVLSETHALK 60
           MGCCVSSG   +SAHKFD   AAA  KI+       SREPPSSMEEETVKEVL+ET ALK
Sbjct: 1   MGCCVSSG---NSAHKFDRNSAAADEKIY------ESREPPSSMEEETVKEVLTETPALK 60

Query: 61  PLPISPPLKSCPPEEDEAQKPVGDKV---TYEIEKKLPEIPINGIVQQASEFDEISNPDK 120
           P    PP K+ PP+EDEA KPV DKV     EIEKK+  IP N + + A EF EIS+P +
Sbjct: 61  P---PPPPKNHPPDEDEAPKPVADKVKEEENEIEKKIRVIPTNCVAEHACEFSEISSPSE 120

Query: 121 FFATANFTDIMDGGEEVHQMVLKA----LPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPV 180
             + A FTD MD GEEVHQ V +A    LP NQS  G+V  KR++ PN+ LNRRSDQSPV
Sbjct: 121 CLSAATFTDKMDDGEEVHQRVFRASPVKLPKNQSFSGDV--KREMLPNRALNRRSDQSPV 180

Query: 181 RRNSFVGSARLVQKRD 187
           RRN  VGSARL Q RD
Sbjct: 181 RRNGVVGSARLAQNRD 182

[Close]

BLAST of Carg07800 vs. TAIR 10
Match: AT1G61170.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11125.1); Has 54 Blast hits to 54 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 34; Viruses - 1; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 7.0e-10
Identity = 92/299 (30.77%), Postives = 134/299 (44.82%), Query Frame = 0


Query: 3   CCVSSGKSSSSAHKFDAAAAGKIFGPLTDNGSREPPSSMEEET-VKEVLSETHALKP--- 62
           CCVSSG +                    +N S +  + +EEET VKEVLSET    P   
Sbjct: 4   CCVSSGTTDRE----------------NENVSDKNTTIVEEETVVKEVLSETTLFTPSSS 63

Query: 63  ---LPISPPLKSCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIV--QQASEFDEISNPD 122
                   P+K+    EDE +KP   K+  +     P +   G V  ++ SE  EI +  
Sbjct: 64  FRTSTFKDPVKT-KIREDEEKKPGFLKMASD-----PVLIRPGSVDPEEGSEVSEICSL- 123

Query: 123 KFFATANFTDIMDGGEEVHQMVLKALPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPVRRN 182
               + + T +M+G +E H M+ +    +Q  P +   + +++ N    RR+DQSP +RN
Sbjct: 124 SLSESVSSTVVMNGYDEEHVMMKQR--KSQRSPAKT--RTQVTGNNYPTRRTDQSPRKRN 183

Query: 183 SFVGSARLVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSALGRT 242
           +                 T  G R     +DP E  GRRSRSPAT R     ++S+    
Sbjct: 184 N----------------GTCNGARYGSGVRDPGERSGRRSRSPATNRSVMDSNQSSRVGG 243

Query: 243 PSVRKSGKSSPLRTPTAITQAPATSRKVVEENNITEGNMITQIESLENPLVSLECFIFL 293
              RK+ +S     P  +   PA +    +++   +    T  E LENPLVSLECFIFL
Sbjct: 244 AKTRKNNQS-----PGRVRLDPAKNGLDQQQH---QNYGYTTEELLENPLVSLECFIFL 251

[Close]

BLAST of Carg07800 vs. TAIR 10
Match: AT1G11125.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G61170.1). )

HSP 1 Score: 54.3 bits (129), Expect = 1.9e-07
Identity = 93/313 (29.71%), Postives = 128/313 (40.89%), Query Frame = 0


Query: 1   MGCCVSSGKSSSSAHKFDAAAAGKIFGPLTDNGSREPPSSMEEET-VKEVLSETHALKPL 60
           MGCC+SS            A A K   P++   +  PPS ++EET VKEVLSET      
Sbjct: 1   MGCCLSS------------ATADKKDDPVSGKNTARPPSVIDEETVVKEVLSET------ 60

Query: 61  PISPPLKSCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQASEFDEISNPDKFFATA 120
                L +   +    +K    K+  E EKK P I ++   +       +  P+K    +
Sbjct: 61  ----TLLTSSNDNSTVEKTTLTKIQEEEEKK-PGIVVDVAQEPVLTKPSLVEPEKGSEVS 120

Query: 121 NFTDIMDG---------GEEVHQMVLKALPTNQSIPGEVGLKRKLSPNKTL----NRRSD 180
               + +           EEV QM  K+    Q  P +       S N+ +    NRR+D
Sbjct: 121 ENCSLSESLLSIVNKYDEEEVKQM--KSHVVRQRSPAK-------SRNRVMVSYPNRRTD 180

Query: 181 QSPVRRNS--FVGSARLVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSG 240
            SP +RN+    GS RLV      P+ T          +D  E   RRSRSPA  R    
Sbjct: 181 MSPRKRNNEEEAGSVRLV------PSAT--------GTRDSTERSERRSRSPAMNRSVMM 240

Query: 241 GSRSALGRTPSVRKSGKSSPLRTPTAITQAPATSRKVVEENNITEGNMITQI-----ESL 293
           G   +   T S     + S  ++P  +   P  +    E N+      I        +S 
Sbjct: 241 GPTRSQQSTDSCGAMRRQS--QSPGRVRLNPNMNGSDQECNHHKWPGSIGNYNSAPNDSF 265

The following BLAST results are available for this feature:

BLAST of Carg07800 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026590.1	6.7e-156	100.00	hypothetical protein SDJN02_10592, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6594621.1	1.7e-154	98.97	hypothetical protein SDJN03_11174, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022926404.1	7.0e-153	98.29	uncharacterized protein LOC111433567 [Cucurbita moschata]	[more]
XP_023518159.1	1.2e-147	96.86	uncharacterized protein LOC111781703 [Cucurbita pepo subsp. pepo]	[more]
XP_038882208.1	4.6e-80	63.09	uncharacterized protein LOC120073430 [Benincasa hispida]	[more]

BLAST of Carg07800 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg07800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EF08	3.4e-153	98.29	uncharacterized protein LOC111433567 OS=Cucurbita moschata OX=3662 GN=LOC1114335...	[more]
A0A5D3CNI1	1.2e-78	61.41	Putative BEST plant protein match is: (TAIR:plant.1) protein OS=Cucumis melo var...	[more]
A0A1S3B2L5	1.2e-78	61.41	uncharacterized protein LOC103485312 OS=Cucumis melo OX=3656 GN=LOC103485312 PE=...	[more]
A0A0A0KLE9	2.6e-76	61.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517100 PE=4 SV=1	[more]
A0A6J1CMA7	3.4e-44	60.71	uncharacterized protein LOC111012433 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]

BLAST of Carg07800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61170.1	7.0e-10	30.77	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT1G11125.1	1.9e-07	29.71	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..262
None	No IPR available	PANTHER	PTHR33871	OS05G0503100 PROTEIN-RELATED	coord: 1..292
None	No IPR available	PANTHER	PTHR33871:SF1	OS05G0503100 PROTEIN	coord: 1..292

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07800-RA	Carg07800-RA	mRNA