Carg07796 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07796
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	TIR domain-containing protein
Location	Carg_Chr07: 1205207 .. 1205871 (+)
RNA-Seq Expression	Carg07796
Synteny	Carg07796

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATGCAACGCTCAATACTGGCGAAGGCCAAGCACGCCTGCGCCAAACTTTCAGGTGTTTATAACAAGGGCAGCATAATAAAATTGAACGAAAGGCAAGTGATTTCAACCAAAAACCAACCCCCATTTGACGTCTTCATCAGCTACCGTGGAACCGATACAAGACGGACCATCGCCGGACTGTTGTACGATCACCTCTACCACGTGGGGCAGCTGCGACCATTTCTGGACTACAAATCCTTGTCCCCTGGCGACAACATCATGGACAAAATCAGCGCCGCCGTCAAAACCTGCAGAGTGGGATTGCCAGTTTTCTCGCCGCGGTATTGTGAGTCTTATTACTGCCTCTACGAGCTGGCTCTTATGTACCGAACCAGCAAGTGTATTGTGCCAATTTTTTGCGATATGAAGCCCTCACAGCTCCGAGTTCCCAGTGATAGAAGCTCTACGCTCCAGTGCTTCGCTTGGGCCCTTGATGAAGCTAAGGAGACTGTTGGCCTATCTTTCGATTCTACAAATGGGTGTGTTTTTTTTTTTCGGTTCTTTTGTTCATAAGAACAGAATTTTGTCCTGATTTTGTTTGTTTGGCATGCAGAGATTGGTCGGAGCTGCTAACCAATGCTTCAGATGCAGTGAGGAAGATGTTGGAGGCCAGTGAATAA

mRNA sequence

ATGGGGATGCAACGCTCAATACTGGCGAAGGCCAAGCACGCCTGCGCCAAACTTTCAGGTGTTTATAACAAGGGCAGCATAATAAAATTGAACGAAAGGCAAGTGATTTCAACCAAAAACCAACCCCCATTTGACGTCTTCATCAGCTACCGTGGAACCGATACAAGACGGACCATCGCCGGACTGTTGTACGATCACCTCTACCACGTGGGGCAGCTGCGACCATTTCTGGACTACAAATCCTTGTCCCCTGGCGACAACATCATGGACAAAATCAGCGCCGCCGTCAAAACCTGCAGAGTGGGATTGCCAGTTTTCTCGCCGCGGTATTGTGAGTCTTATTACTGCCTCTACGAGCTGGCTCTTATGTACCGAACCAGCAAGTGTATTGTGCCAATTTTTTGCGATATGAAGCCCTCACAGCTCCGAGTTCCCAGTGATAGAAGCTCTACGCTCCAGTGCTTCGCTTGGGCCCTTGATGAAGCTAAGGAGACTGTTGGCCTATCTTTCGATTCTACAAATGGAGATTGGTCGGAGCTGCTAACCAATGCTTCAGATGCAGTGAGGAAGATGTTGGAGGCCAGTGAATAA

Coding sequence (CDS)

ATGGGGATGCAACGCTCAATACTGGCGAAGGCCAAGCACGCCTGCGCCAAACTTTCAGGTGTTTATAACAAGGGCAGCATAATAAAATTGAACGAAAGGCAAGTGATTTCAACCAAAAACCAACCCCCATTTGACGTCTTCATCAGCTACCGTGGAACCGATACAAGACGGACCATCGCCGGACTGTTGTACGATCACCTCTACCACGTGGGGCAGCTGCGACCATTTCTGGACTACAAATCCTTGTCCCCTGGCGACAACATCATGGACAAAATCAGCGCCGCCGTCAAAACCTGCAGAGTGGGATTGCCAGTTTTCTCGCCGCGGTATTGTGAGTCTTATTACTGCCTCTACGAGCTGGCTCTTATGTACCGAACCAGCAAGTGTATTGTGCCAATTTTTTGCGATATGAAGCCCTCACAGCTCCGAGTTCCCAGTGATAGAAGCTCTACGCTCCAGTGCTTCGCTTGGGCCCTTGATGAAGCTAAGGAGACTGTTGGCCTATCTTTCGATTCTACAAATGGAGATTGGTCGGAGCTGCTAACCAATGCTTCAGATGCAGTGAGGAAGATGTTGGAGGCCAGTGAATAA

Protein sequence

MGMQRSILAKAKHACAKLSGVYNKGSIIKLNERQVISTKNQPPFDVFISYRGTDTRRTIAGLLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYELALMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSELLTNASDAVRKMLEASE

Homology

[Close]

BLAST of Carg07796 vs. NCBI nr
Match: XP_022926604.1 (TMV resistance protein N-like [Cucurbita moschata] >KAG6594617.1 TIR-only protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026587.1 TMV resistance protein N, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 402.1 bits (1032), Expect = 2.7e-108
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MGMQRSILAKAKHACAKLSGVYNKGSIIKLNERQVISTKNQPPFDVFISYRGTDTRRTIA 60
           MGMQRSILAKAKHACAKLSGVYNKGSIIKLNERQVISTKNQPPFDVFISYRGTDTRRTIA
Sbjct: 1   MGMQRSILAKAKHACAKLSGVYNKGSIIKLNERQVISTKNQPPFDVFISYRGTDTRRTIA 60

Query: 61  GLLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYEL 120
           GLLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYEL
Sbjct: 61  GLLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYEL 120

Query: 121 ALMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSEL 180
           ALMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSEL
Sbjct: 121 ALMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSEL 180

Query: 181 LTNASDAVRKMLEASE 197
           LTNASDAVRKMLEASE
Sbjct: 181 LTNASDAVRKMLEASE 196

[Close]

BLAST of Carg07796 vs. NCBI nr
Match: XP_023517713.1 (TMV resistance protein N-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396.0 bits (1016), Expect = 1.9e-106
Identity = 193/196 (98.47%), Postives = 194/196 (98.98%), Query Frame = 0


Query: 1   MGMQRSILAKAKHACAKLSGVYNKGSIIKLNERQVISTKNQPPFDVFISYRGTDTRRTIA 60
           MGMQRSILAKAKHACAKLS VYNKGSIIKL+ERQVISTKNQPPFDVFISYRGTDTRRTIA
Sbjct: 1   MGMQRSILAKAKHACAKLSSVYNKGSIIKLSERQVISTKNQPPFDVFISYRGTDTRRTIA 60

Query: 61  GLLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYEL 120
           GLLYDHLYHVGQL PFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYEL
Sbjct: 61  GLLYDHLYHVGQLHPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYEL 120

Query: 121 ALMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSEL 180
           ALMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSEL
Sbjct: 121 ALMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSEL 180

Query: 181 LTNASDAVRKMLEASE 197
           LTNASDAVRKMLEASE
Sbjct: 181 LTNASDAVRKMLEASE 196

[Close]

BLAST of Carg07796 vs. NCBI nr
Match: XP_023003829.1 (TMV resistance protein N-like [Cucurbita maxima])

HSP 1 Score: 388.7 bits (997), Expect = 3.1e-104
Identity = 190/196 (96.94%), Postives = 192/196 (97.96%), Query Frame = 0


Query: 1   MGMQRSILAKAKHACAKLSGVYNKGSIIKLNERQVISTKNQPPFDVFISYRGTDTRRTIA 60
           M MQRSILAKAKHACAKLS VYNKGS+IKL+ERQVISTKNQPPFDVFISYRGTDTRRTIA
Sbjct: 1   MEMQRSILAKAKHACAKLSSVYNKGSMIKLSERQVISTKNQPPFDVFISYRGTDTRRTIA 60

Query: 61  GLLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYEL 120
           GLLYDHL HVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYEL
Sbjct: 61  GLLYDHLSHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYEL 120

Query: 121 ALMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSEL 180
           ALMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSEL
Sbjct: 121 ALMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSEL 180

Query: 181 LTNASDAVRKMLEASE 197
           LTNASDAVRKMLE SE
Sbjct: 181 LTNASDAVRKMLEGSE 196

[Close]

BLAST of Carg07796 vs. NCBI nr
Match: KAG7033887.1 (TMV resistance protein N, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 220.3 bits (560), Expect = 1.4e-53
Identity = 117/195 (60.00%), Postives = 147/195 (75.38%), Query Frame = 0


Query: 3   MQRSILA-KAKHACAKLSGVYNKGSIIKLNERQVISTKNQPPFDVFISYRGTDTRRTIAG 62
           MQRS  A KA H CAK          IK   +  I T++ P FDVFIS+RG DTRR++AG
Sbjct: 1   MQRSPAAVKATHLCAK----------IKNRIKNRIKTES-PDFDVFISHRGIDTRRSVAG 60

Query: 63  LLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYELA 122
           +L++H   +G LRPFLD KS+SPGDN++ KI +A+++CRVG+PVFSPRYCESYYCLYELA
Sbjct: 61  ILHEHFSGLG-LRPFLDVKSMSPGDNLIGKIDSAIRSCRVGVPVFSPRYCESYYCLYELA 120

Query: 123 LMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSELL 182
            M R++K IVPIF ++KPS+LRV +D +  L  FAWA++EAK TVGLSFDSTNGDWSELL
Sbjct: 121 RMLRSNKWIVPIFWNVKPSELRV-ADENKRLSRFAWAVEEAKCTVGLSFDSTNGDWSELL 180

Query: 183 TNASDAVRKMLEASE 197
           T+ S A  K++E  E
Sbjct: 181 TSVSGAAMKLVEEDE 182

[Close]

BLAST of Carg07796 vs. NCBI nr
Match: XP_022950368.1 (toll/interleukin-1 receptor-like protein [Cucurbita moschata])

HSP 1 Score: 215.3 bits (547), Expect = 4.7e-52
Identity = 114/195 (58.46%), Postives = 146/195 (74.87%), Query Frame = 0


Query: 3   MQRSILA-KAKHACAKLSGVYNKGSIIKLNERQVISTKNQPPFDVFISYRGTDTRRTIAG 62
           MQRS  A KA H CAK+              +  I T++ P FDVFIS+RG DTRR++AG
Sbjct: 1   MQRSPAAVKATHLCAKI--------------KNRIKTES-PDFDVFISHRGIDTRRSVAG 60

Query: 63  LLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYELA 122
           +L++H   +G L PFLD KS+SPGDN++ KI +A+++CRVG+PVFSPRYCESYYCLYELA
Sbjct: 61  ILHEHFSGLG-LWPFLDVKSMSPGDNLIGKIDSAIRSCRVGVPVFSPRYCESYYCLYELA 120

Query: 123 LMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSELL 182
            M R++K IVPIF ++KPS+LRV +D +  L  FAWA++EAK TVGLSFDSTNGDWSELL
Sbjct: 121 RMLRSNKWIVPIFWNVKPSELRV-ADENKRLSRFAWAVEEAKCTVGLSFDSTNGDWSELL 178

Query: 183 TNASDAVRKMLEASE 197
           ++ S AV K++E  E
Sbjct: 181 SSVSGAVMKLVEEDE 178

[Close]

BLAST of Carg07796 vs. ExPASy Swiss-Prot
Match: I1GTC2 (TIR-only protein OS=Brachypodium distachyon OX=15368 GN=BRADI_1g24377v3 PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 7.5e-37
Identity = 82/207 (39.61%), Postives = 128/207 (61.84%), Query Frame = 0


Query: 1   MGMQRSILAKAKHACAKLSGVYNKGSI----IKLNERQVISTKNQPPFDVFISYRGTDTR 60
           +  +RSI+A    A A+      +G++    ++ +E  +     +  ++VFI++RG DT+
Sbjct: 6   LSSRRSIMASRLTASAEAVNEPRRGAVVSRRVEYDEESLAGAGGESRYEVFINHRGVDTK 65

Query: 61  RTIAGLLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYC 120
           RT+A LLYD L   G LR FLD  S+ PGD + ++I +A++ C V + +FSP YC+S YC
Sbjct: 66  RTVARLLYDRLAQAG-LRGFLDNMSMRPGDRLEERIGSAIRECTVAVAIFSPSYCDSEYC 125

Query: 121 LYELALMYRTSKCIVPIFCDMKPSQLRVPSDRSST-------LQCFAWALDEAKETVGLS 180
           L ELA++  + K I+PIF D+KPS L +P   + +       L+ F +AL EAK TVG++
Sbjct: 126 LRELAMLVESRKAIIPIFYDIKPSDLLLPQAVADSEVYLPRDLERFKFALREAKHTVGIT 185

Query: 181 FDSTNGDWSELLTNASDAVRKMLEASE 197
           +DS  GD +EL++ A+DAV   +E  E
Sbjct: 186 YDSATGDMAELVSAAADAVMYNMEKME 211

[Close]

BLAST of Carg07796 vs. ExPASy Swiss-Prot
Match: A0A290U7C4 (Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.9e-11
Identity = 38/104 (36.54%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 44  FDVFISYRGTDTRRTIAGLLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGL 103
           +DVF+S+RG DTR+T  G L++ L   G +  F+D K L  G +I  ++  A+   R  +
Sbjct: 12  YDVFLSFRGEDTRKTFVGHLFNALIEKG-IHTFMDDKELKRGKSISSELMKAIGESRFAV 71

Query: 104 PVFSPRYCESYYCLYELALMYRTSK----CIVPIFCDMKPSQLR 144
            VFS  Y  S +CL EL  +    +     +VP+F D+ PS +R
Sbjct: 72  VVFSKNYASSTWCLEELVKILEIHEKFELIVVPVFYDVDPSTVR 114

[Close]

BLAST of Carg07796 vs. ExPASy Swiss-Prot
Match: Q40392 (TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.4e-11
Identity = 39/111 (35.14%), Postives = 62/111 (55.86%), Query Frame = 0


Query: 37  STKNQPPFDVFISYRGTDTRRTIAGLLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAV 96
           S+ ++  +DVF+S+RG DTR+T    LY+ L   G ++ F D K L  G  I  ++  A+
Sbjct: 5   SSSSRWSYDVFLSFRGEDTRKTFTSHLYEVLNDKG-IKTFQDDKRLEYGATIPGELCKAI 64

Query: 97  KTCRVGLPVFSPRYCESYYCLYELALMY----RTSKCIVPIFCDMKPSQLR 144
           +  +  + VFS  Y  S +CL EL  +     R  + ++PIF D+ PS +R
Sbjct: 65  EESQFAIVVFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVR 114

[Close]

BLAST of Carg07796 vs. ExPASy Swiss-Prot
Match: Q9SSN3 (Toll/interleukin-1 receptor-like protein OS=Arabidopsis thaliana OX=3702 GN=TIR PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.3e-08
Identity = 34/112 (30.36%), Postives = 55/112 (49.11%), Query Frame = 0


Query: 36  ISTKNQPPFDVFISYRGTDTRRTIAGLLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAA 95
           +S+     +DVF+S+RG DTR      LY  L     +R F D K L  G     ++ + 
Sbjct: 1   MSSHTATKYDVFLSFRGHDTRHNFISFLYKELVR-RSIRTFKDDKELENGQRFSPELKSP 60

Query: 96  VKTCRVGLPVFSPRYCESYYCLYELALMY----RTSKCIVPIFCDMKPSQLR 144
           ++  R  + V S  Y  S +CL EL  +     + S  ++PIF  ++P+ +R
Sbjct: 61  IEVSRFAVVVVSENYAASSWCLDELVTIMDFEKKGSITVMPIFYGVEPNHVR 111

[Close]

BLAST of Carg07796 vs. ExPASy Swiss-Prot
Match: Q40253 (Disease resistance protein L6 OS=Linum usitatissimum OX=4006 GN=L6 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.3e-08
Identity = 34/105 (32.38%), Postives = 53/105 (50.48%), Query Frame = 0


Query: 44  FDVFISYRGTDTRRTIAGLLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGL 103
           ++VF+S+RG DTR      LY  L    ++  F D   L  G  I   +  A+   ++ +
Sbjct: 61  YEVFLSFRGPDTREQFTDFLYQSLRRY-KIHTFRDDDELLKGKEIGPNLLRAIDQSKIYV 120

Query: 104 PVFSPRYCESYYCLYELALMYRTS-----KCIVPIFCDMKPSQLR 144
           P+ S  Y +S +CL ELA + R       + I+PIF  + PS +R
Sbjct: 121 PIISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVR 164

[Close]

BLAST of Carg07796 vs. ExPASy TrEMBL
Match: A0A6J1EFM8 (TMV resistance protein N-like OS=Cucurbita moschata OX=3662 GN=LOC111433685 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.3e-108
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MGMQRSILAKAKHACAKLSGVYNKGSIIKLNERQVISTKNQPPFDVFISYRGTDTRRTIA 60
           MGMQRSILAKAKHACAKLSGVYNKGSIIKLNERQVISTKNQPPFDVFISYRGTDTRRTIA
Sbjct: 1   MGMQRSILAKAKHACAKLSGVYNKGSIIKLNERQVISTKNQPPFDVFISYRGTDTRRTIA 60

Query: 61  GLLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYEL 120
           GLLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYEL
Sbjct: 61  GLLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYEL 120

Query: 121 ALMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSEL 180
           ALMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSEL
Sbjct: 121 ALMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSEL 180

Query: 181 LTNASDAVRKMLEASE 197
           LTNASDAVRKMLEASE
Sbjct: 181 LTNASDAVRKMLEASE 196

[Close]

BLAST of Carg07796 vs. ExPASy TrEMBL
Match: A0A6J1KUG3 (TMV resistance protein N-like OS=Cucurbita maxima OX=3661 GN=LOC111497297 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.5e-104
Identity = 190/196 (96.94%), Postives = 192/196 (97.96%), Query Frame = 0


Query: 1   MGMQRSILAKAKHACAKLSGVYNKGSIIKLNERQVISTKNQPPFDVFISYRGTDTRRTIA 60
           M MQRSILAKAKHACAKLS VYNKGS+IKL+ERQVISTKNQPPFDVFISYRGTDTRRTIA
Sbjct: 1   MEMQRSILAKAKHACAKLSSVYNKGSMIKLSERQVISTKNQPPFDVFISYRGTDTRRTIA 60

Query: 61  GLLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYEL 120
           GLLYDHL HVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYEL
Sbjct: 61  GLLYDHLSHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYEL 120

Query: 121 ALMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSEL 180
           ALMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSEL
Sbjct: 121 ALMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSEL 180

Query: 181 LTNASDAVRKMLEASE 197
           LTNASDAVRKMLE SE
Sbjct: 181 LTNASDAVRKMLEGSE 196

[Close]

BLAST of Carg07796 vs. ExPASy TrEMBL
Match: A0A6J1GEQ2 (toll/interleukin-1 receptor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111453481 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 2.3e-52
Identity = 114/195 (58.46%), Postives = 146/195 (74.87%), Query Frame = 0


Query: 3   MQRSILA-KAKHACAKLSGVYNKGSIIKLNERQVISTKNQPPFDVFISYRGTDTRRTIAG 62
           MQRS  A KA H CAK+              +  I T++ P FDVFIS+RG DTRR++AG
Sbjct: 1   MQRSPAAVKATHLCAKI--------------KNRIKTES-PDFDVFISHRGIDTRRSVAG 60

Query: 63  LLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYELA 122
           +L++H   +G L PFLD KS+SPGDN++ KI +A+++CRVG+PVFSPRYCESYYCLYELA
Sbjct: 61  ILHEHFSGLG-LWPFLDVKSMSPGDNLIGKIDSAIRSCRVGVPVFSPRYCESYYCLYELA 120

Query: 123 LMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSELL 182
            M R++K IVPIF ++KPS+LRV +D +  L  FAWA++EAK TVGLSFDSTNGDWSELL
Sbjct: 121 RMLRSNKWIVPIFWNVKPSELRV-ADENKRLSRFAWAVEEAKCTVGLSFDSTNGDWSELL 178

Query: 183 TNASDAVRKMLEASE 197
           ++ S AV K++E  E
Sbjct: 181 SSVSGAVMKLVEEDE 178

[Close]

BLAST of Carg07796 vs. ExPASy TrEMBL
Match: A0A5C7GRA7 (TIR domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_026635 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 9.8e-48
Identity = 104/193 (53.89%), Postives = 133/193 (68.91%), Query Frame = 0


Query: 7   ILAKAKHACAKLSGVYNKGSIIKLNERQVISTKNQPPFDVFISYRGTDTRRTIAGLLYDH 66
           +++ AKH C  +   YN+           I    + P DVFI++RGTDT+RTIAGLLYDH
Sbjct: 13  VVSSAKHLCGTILNSYNQ-----------IQAPVKRPCDVFINHRGTDTKRTIAGLLYDH 72

Query: 67  LYHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYELALMYRT 126
           L+ + +L PFLD K++ PGD + DKI AA+K   +G+ VFSPRYCESY+CL+ELAL+  +
Sbjct: 73  LFRM-RLNPFLDSKNMKPGDRLFDKIDAAIKHSTIGVAVFSPRYCESYFCLHELALIMES 132

Query: 127 SKCIVPIFCDMKPSQLRVPSD---RSSTLQCFAWALDEAKETVGLSFDSTNGDWSELLTN 186
            K ++PIF D+KPSQL+V  D    S  LQ FA AL+EAK TVGL+FDS NGDWSE LT 
Sbjct: 133 KKKVIPIFYDVKPSQLQVKDDGTCSSKELQRFARALEEAKYTVGLTFDSLNGDWSEFLTT 192

Query: 187 ASDAVRKMLEASE 197
           A+DAV K L   E
Sbjct: 193 ATDAVIKNLIEEE 193

[Close]

BLAST of Carg07796 vs. ExPASy TrEMBL
Match: A0A5J4ZCK5 (TIR domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_018472 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.9e-46
Identity = 102/193 (52.85%), Postives = 136/193 (70.47%), Query Frame = 0


Query: 3   MQRSILAKAKHACAKLSGVYNKGSIIKLNERQVISTKNQPPFDVFISYRGTDTRRTIAGL 62
           MQRS  + AK+ C +L  + N+   IK             P DVFIS+RG DT+R +AGL
Sbjct: 1   MQRS--SSAKNVCRQLLRLRNQIQAIK-----------PQPCDVFISHRGIDTKRNVAGL 60

Query: 63  LYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYELAL 122
           LYDHL  +  LRPFLD +++ PGD + +KI  A++ C+VGL VFSPRYCES +CL+EL+ 
Sbjct: 61  LYDHLSML-NLRPFLDSRNMKPGDKLSEKIDMAIRNCKVGLVVFSPRYCESCFCLHELSR 120

Query: 123 MYRTSKCIVPIFCDMKPSQLRVPSDR---SSTLQCFAWALDEAKETVGLSFDSTNGDWSE 182
           +  + K ++PIFCD+KPS+LRV  +R   S+ L+   WAL+EAK TVGL+FDS+NGDWSE
Sbjct: 121 IMESRKKVIPIFCDVKPSELRVKFNRRCPSNELRRLEWALEEAKYTVGLTFDSSNGDWSE 179

Query: 183 LLTNASDAVRKML 193
           LL+NASDA+ K L
Sbjct: 181 LLSNASDAIMKSL 179

[Close]

BLAST of Carg07796 vs. TAIR 10
Match: AT1G61105.1 (Toll-Interleukin-Resistance (TIR) domain family protein )

HSP 1 Score: 174.1 bits (440), Expect = 1.1e-43
Identity = 86/158 (54.43%), Postives = 117/158 (74.05%), Query Frame = 0


Query: 43  PFDVFISYRGTDTRRTIAGLLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVG 102
           P D+FI++RG DT++TI+GLLYD  +   +L  FLD KSL PGD +  +I  A+K C VG
Sbjct: 28  PCDIFINHRGIDTKKTISGLLYD-CFTRQRLTAFLDSKSLKPGDRLFVEIDMAIKACGVG 87

Query: 103 LPVFSPRYCESYYCLYELALMYRTSKCIVPIFCDMKPSQLRVPSDR---SSTLQCFAWAL 162
           + VFSPRYC+SY+CL+ELAL+ +  K ++PIFCD+KPS+L V  D+   ++ ++ F  AL
Sbjct: 88  IAVFSPRYCDSYFCLHELALLVKNKKRVIPIFCDVKPSELCVKDDKTRPAAEIRRFQLAL 147

Query: 163 DEAKETVGLSFDSTNGDWSELLTNASDAVRK-MLEASE 197
           +EAK TVGL+FD++NGDWSE L  ASDAV K +LE  E
Sbjct: 148 EEAKYTVGLTFDTSNGDWSEFLAMASDAVTKNLLEVEE 184

[Close]

BLAST of Carg07796 vs. TAIR 10
Match: AT1G52900.1 (Toll-Interleukin-Resistance (TIR) domain family protein )

HSP 1 Score: 161.0 bits (406), Expect = 9.7e-40
Identity = 82/160 (51.25%), Postives = 112/160 (70.00%), Query Frame = 0


Query: 37  STKNQPPFDVFISYRGTDTRRTIAGLLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAV 96
           S K +   DVFI++RG+DT+R IA LLYD+L     LRPFLD K++ PGD + D I+ A+
Sbjct: 31  SAKPKILHDVFINHRGSDTKRNIATLLYDNL-KSRNLRPFLDSKNMKPGDKLFDHINNAI 90

Query: 97  KTCRVGLPVFSPRYCESYYCLYELALMYRTSKCIVPIFCDMKPSQLRVPSDR----SSTL 156
            T +V + VFSP YC+SY+CL+ELAL+  + K ++PIFCD+KPSQL V  +R       +
Sbjct: 91  LTSKVAVTVFSPNYCDSYFCLHELALIMESRKRVIPIFCDIKPSQLDVMIERVTCSDDEI 150

Query: 157 QCFAWALDEAKETVGLSFDSTNGDWSELLTNASDAVRKML 193
           Q F WAL EAK+ VGL+FDS  G+ SE++T ASD + + L
Sbjct: 151 QRFRWALQEAKDIVGLTFDSYKGNLSEVVTVASDVIVERL 189

[Close]

BLAST of Carg07796 vs. TAIR 10
Match: AT1G17615.1 (Disease resistance protein (TIR-NBS class) )

HSP 1 Score: 72.0 bits (175), Expect = 5.9e-13
Identity = 38/111 (34.23%), Postives = 60/111 (54.05%), Query Frame = 0


Query: 37  STKNQPPFDVFISYRGTDTRRTIAGLLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAV 96
           S+     FDVF+S+RG DTRRT    LY  L  +G +R F D   L  G  I   + AA+
Sbjct: 8   SSATPQKFDVFLSFRGKDTRRTFISFLYKELIEMG-IRTFKDDVELQSGRRIASDLLAAI 67

Query: 97  KTCRVGLPVFSPRYCESYYCLYELALMYRTSK----CIVPIFCDMKPSQLR 144
           +  ++ + + S  Y  S +CL EL ++    K     ++PIF +++P+ +R
Sbjct: 68  ENSKIAVVIISKNYSASPWCLQELVMIMDVEKKGSIIVMPIFYNVEPAHVR 117

[Close]

BLAST of Carg07796 vs. TAIR 10
Match: AT4G09430.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 70.1 bits (170), Expect = 2.3e-12
Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 44  FDVFISYRGTDTRRTIAGLLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGL 103
           +DVF+S+RG DTR  I   L+  L  VG +R F D K L  GD I +K+  A++T    +
Sbjct: 15  YDVFLSFRGADTRNNIVSYLHKALVDVG-IRTFKDDKELEEGDIISEKLVNAIQTSWFAV 74

Query: 104 PVFSPRYCESYYCLYEL----ALMYRTSKCIVPIFCDMKPSQLR 144
            V S +Y  S +CL EL     L  +    +VPIF  ++PS +R
Sbjct: 75  VVLSEKYVTSSWCLEELRHIMELSIQDDIIVVPIFYKVEPSDVR 117

[Close]

BLAST of Carg07796 vs. TAIR 10
Match: AT1G72890.1 (Disease resistance protein (TIR-NBS class) )

HSP 1 Score: 67.4 bits (163), Expect = 1.5e-11
Identity = 44/136 (32.35%), Postives = 69/136 (50.74%), Query Frame = 0


Query: 17  KLSGVYNKGSIIKLNERQVISTKNQ-----PPFDVFISYRGTDTRRTIAGLLYDHLYHVG 76
           KLS    K   +++ E + +S+ +        FDVF+S+RG DTR+     LY  L   G
Sbjct: 7   KLSCFKKKVKSLRIFESRSLSSSSSSSFTPQKFDVFLSFRGKDTRKNFVSFLYKALVSKG 66

Query: 77  QLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYELALMYRTSK--- 136
            +R F D + L  G  I  ++  A+K  R+ + V S  Y  S +CL EL  + +  K   
Sbjct: 67  -IRTFKDDEELERGRPIPPELRQAIKGSRIAVVVVSVTYPASSWCLEELREILKLEKLGL 126

Query: 137 -CIVPIFCDMKPSQLR 144
             ++PIF ++ PS +R
Sbjct: 127 LTVIPIFYEINPSDVR 141

The following BLAST results are available for this feature:

BLAST of Carg07796 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926604.1	2.7e-108	100.00	TMV resistance protein N-like [Cucurbita moschata] >KAG6594617.1 TIR-only protei...	[more]
XP_023517713.1	1.9e-106	98.47	TMV resistance protein N-like [Cucurbita pepo subsp. pepo]	[more]
XP_023003829.1	3.1e-104	96.94	TMV resistance protein N-like [Cucurbita maxima]	[more]
KAG7033887.1	1.4e-53	60.00	TMV resistance protein N, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022950368.1	4.7e-52	58.46	toll/interleukin-1 receptor-like protein [Cucurbita moschata]	[more]

BLAST of Carg07796 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
I1GTC2	7.5e-37	39.61	TIR-only protein OS=Brachypodium distachyon OX=15368 GN=BRADI_1g24377v3 PE=1 SV=...	[more]
A0A290U7C4	1.9e-11	36.54	Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV...	[more]
Q40392	5.4e-11	35.14	TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1	[more]
Q9SSN3	3.3e-08	30.36	Toll/interleukin-1 receptor-like protein OS=Arabidopsis thaliana OX=3702 GN=TIR ...	[more]
Q40253	7.3e-08	32.38	Disease resistance protein L6 OS=Linum usitatissimum OX=4006 GN=L6 PE=1 SV=1	[more]

BLAST of Carg07796 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EFM8	1.3e-108	100.00	TMV resistance protein N-like OS=Cucurbita moschata OX=3662 GN=LOC111433685 PE=4...	[more]
A0A6J1KUG3	1.5e-104	96.94	TMV resistance protein N-like OS=Cucurbita maxima OX=3661 GN=LOC111497297 PE=4 S...	[more]
A0A6J1GEQ2	2.3e-52	58.46	toll/interleukin-1 receptor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A5C7GRA7	9.8e-48	53.89	TIR domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_026635 PE=4...	[more]
A0A5J4ZCK5	1.9e-46	52.85	TIR domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_018472 PE=4 S...	[more]

BLAST of Carg07796 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61105.1	1.1e-43	54.43	Toll-Interleukin-Resistance (TIR) domain family protein	[more]
AT1G52900.1	9.7e-40	51.25	Toll-Interleukin-Resistance (TIR) domain family protein	[more]
AT1G17615.1	5.9e-13	34.23	Disease resistance protein (TIR-NBS class)	[more]
AT4G09430.1	2.3e-12	39.42	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT1G72890.1	1.5e-11	32.35	Disease resistance protein (TIR-NBS class)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	SMART	SM00255	till_3	coord: 43..187 e-value: 1.2E-13 score: 61.4
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PFAM	PF13676	TIR_2	coord: 46..156 e-value: 2.8E-16 score: 60.2
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PROSITE	PS50104	TIR	coord: 42..192 score: 24.507368
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	GENE3D	3.40.50.10140		coord: 10..166 e-value: 2.7E-29 score: 103.7
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	SUPERFAMILY	52200	Toll/Interleukin receptor TIR domain	coord: 40..144
None	No IPR available	PANTHER	PTHR31008:SF19	TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN FAMILY PROTEIN	coord: 35..194
None	No IPR available	PANTHER	PTHR31008	COP1-INTERACTING PROTEIN-RELATED	coord: 35..194

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07796-RA	Carg07796-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
molecular_function	GO:0003953	NAD+ nucleosidase activity