Carg07764 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07764
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein E6
Location	Carg_Chr07: 1079114 .. 1079962 (+)
RNA-Seq Expression	Carg07764
Synteny	Carg07764

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCTCAACCAAGCTCCTTTCTCTTTTTCTTCTCAGTCTTTTCTTCATTCAAATCCATGGCAGAGAAAGCAACTTCTTCAGCAAAGTACCCAACAACAATGGCGAATCCCAAATCCCCAACAAAGTCGACCCTTTAACAACCTCAGAAAAAACCACCACCCCACAAGATCAAGACCCCAATTTTATCCCTCAAACCCAAGACAACGGCTATGGTCTCTACGGTCACGAATCCGGCCAATTCTCTCCTTCCGACGCTAAATTCTCCGATCCCAACGCTAGAACCGGCGGCCGACCATTTTCTACCACCACTACCTACGATGACGGCGAGAACAACTACAAAAGAAACGACGACGTTTCTTACAAATCTGAGTCAGAGGAGTACTACAACTACAACAACAATTACAACAACGACAATTTCCAAAACAGCAACTGGAAAAAACCGTACGAGAATTCGTTTTACTACAACAAGGATCTTTACGACAATCGACGACAAAGCTTCCAAAACACCCGCCTTTCTCGAAACGAATACGCAGCAACAACAACAACTCCTTCATACGACGAGGAAAAATACAACGACGACGACGACAACAACAATTTCTACGCCAACAACCGCAACGACAATGAGAACAACGTGGCGCGACAAGGGATGAGCGACACGAGATTCATGGAGAACGGAAAGTACTTTTATGACCTCAACAGGGAACCTCAGCATCAAAGCAGGTCGAGCAGAAATAATTTCAGAAACAACAACAACTACAACAGGTACGAATACGGTAATTCCATGGGAAGGTATCAGAATGATGAGACAGAATTCCAAGAGGAATCCGATGAGTTCGTGCCATAA

mRNA sequence

ATGGCTTCCTCAACCAAGCTCCTTTCTCTTTTTCTTCTCAGTCTTTTCTTCATTCAAATCCATGGCAGAGAAAGCAACTTCTTCAGCAAAGTACCCAACAACAATGGCGAATCCCAAATCCCCAACAAAGTCGACCCTTTAACAACCTCAGAAAAAACCACCACCCCACAAGATCAAGACCCCAATTTTATCCCTCAAACCCAAGACAACGGCTATGGTCTCTACGGTCACGAATCCGGCCAATTCTCTCCTTCCGACGCTAAATTCTCCGATCCCAACGCTAGAACCGGCGGCCGACCATTTTCTACCACCACTACCTACGATGACGGCGAGAACAACTACAAAAGAAACGACGACGTTTCTTACAAATCTGAGTCAGAGGAGTACTACAACTACAACAACAATTACAACAACGACAATTTCCAAAACAGCAACTGGAAAAAACCGTACGAGAATTCGTTTTACTACAACAAGGATCTTTACGACAATCGACGACAAAGCTTCCAAAACACCCGCCTTTCTCGAAACGAATACGCAGCAACAACAACAACTCCTTCATACGACGAGGAAAAATACAACGACGACGACGACAACAACAATTTCTACGCCAACAACCGCAACGACAATGAGAACAACGTGGCGCGACAAGGGATGAGCGACACGAGATTCATGGAGAACGGAAAGTACTTTTATGACCTCAACAGGGAACCTCAGCATCAAAGCAGGTCGAGCAGAAATAATTTCAGAAACAACAACAACTACAACAGGTACGAATACGGTAATTCCATGGGAAGGTATCAGAATGATGAGACAGAATTCCAAGAGGAATCCGATGAGTTCGTGCCATAA

Coding sequence (CDS)

ATGGCTTCCTCAACCAAGCTCCTTTCTCTTTTTCTTCTCAGTCTTTTCTTCATTCAAATCCATGGCAGAGAAAGCAACTTCTTCAGCAAAGTACCCAACAACAATGGCGAATCCCAAATCCCCAACAAAGTCGACCCTTTAACAACCTCAGAAAAAACCACCACCCCACAAGATCAAGACCCCAATTTTATCCCTCAAACCCAAGACAACGGCTATGGTCTCTACGGTCACGAATCCGGCCAATTCTCTCCTTCCGACGCTAAATTCTCCGATCCCAACGCTAGAACCGGCGGCCGACCATTTTCTACCACCACTACCTACGATGACGGCGAGAACAACTACAAAAGAAACGACGACGTTTCTTACAAATCTGAGTCAGAGGAGTACTACAACTACAACAACAATTACAACAACGACAATTTCCAAAACAGCAACTGGAAAAAACCGTACGAGAATTCGTTTTACTACAACAAGGATCTTTACGACAATCGACGACAAAGCTTCCAAAACACCCGCCTTTCTCGAAACGAATACGCAGCAACAACAACAACTCCTTCATACGACGAGGAAAAATACAACGACGACGACGACAACAACAATTTCTACGCCAACAACCGCAACGACAATGAGAACAACGTGGCGCGACAAGGGATGAGCGACACGAGATTCATGGAGAACGGAAAGTACTTTTATGACCTCAACAGGGAACCTCAGCATCAAAGCAGGTCGAGCAGAAATAATTTCAGAAACAACAACAACTACAACAGGTACGAATACGGTAATTCCATGGGAAGGTATCAGAATGATGAGACAGAATTCCAAGAGGAATCCGATGAGTTCGTGCCATAA

Protein sequence

MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLTTSEKTTTPQDQDPNFIPQTQDNGYGLYGHESGQFSPSDAKFSDPNARTGGRPFSTTTTYDDGENNYKRNDDVSYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSRNEYAATTTTPSYDEEKYNDDDDNNNFYANNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQHQSRSSRNNFRNNNNYNRYEYGNSMGRYQNDETEFQEESDEFVP

Homology

[Close]

BLAST of Carg07764 vs. NCBI nr
Match: KAG7026556.1 (Protein E6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 547.7 bits (1410), Expect = 5.7e-152
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLTTSEKTTTPQDQD 60
           MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLTTSEKTTTPQDQD
Sbjct: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLTTSEKTTTPQDQD 60

Query: 61  PNFIPQTQDNGYGLYGHESGQFSPSDAKFSDPNARTGGRPFSTTTTYDDGENNYKRNDDV 120
           PNFIPQTQDNGYGLYGHESGQFSPSDAKFSDPNARTGGRPFSTTTTYDDGENNYKRNDDV
Sbjct: 61  PNFIPQTQDNGYGLYGHESGQFSPSDAKFSDPNARTGGRPFSTTTTYDDGENNYKRNDDV 120

Query: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSRNEYAA 180
           SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSRNEYAA
Sbjct: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSRNEYAA 180

Query: 181 TTTTPSYDEEKYNDDDDNNNFYANNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQHQ 240
           TTTTPSYDEEKYNDDDDNNNFYANNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQHQ
Sbjct: 181 TTTTPSYDEEKYNDDDDNNNFYANNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQHQ 240

Query: 241 SRSSRNNFRNNNNYNRYEYGNSMGRYQNDETEFQEESDEFVP 283
           SRSSRNNFRNNNNYNRYEYGNSMGRYQNDETEFQEESDEFVP
Sbjct: 241 SRSSRNNFRNNNNYNRYEYGNSMGRYQNDETEFQEESDEFVP 282

[Close]

BLAST of Carg07764 vs. NCBI nr
Match: KAG6594586.1 (Protein E6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 545.8 bits (1405), Expect = 2.2e-151
Identity = 281/282 (99.65%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLTTSEKTTTPQDQD 60
           MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLT SEKTTTPQDQD
Sbjct: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLTNSEKTTTPQDQD 60

Query: 61  PNFIPQTQDNGYGLYGHESGQFSPSDAKFSDPNARTGGRPFSTTTTYDDGENNYKRNDDV 120
           PNFIPQTQDNGYGLYGHESGQFSPSDAKFSDPNARTGGRPFSTTTTYDDGENNYKRNDDV
Sbjct: 61  PNFIPQTQDNGYGLYGHESGQFSPSDAKFSDPNARTGGRPFSTTTTYDDGENNYKRNDDV 120

Query: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSRNEYAA 180
           SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSRNEYAA
Sbjct: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSRNEYAA 180

Query: 181 TTTTPSYDEEKYNDDDDNNNFYANNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQHQ 240
           TTTTPSYDEEKYNDDDDNNNFYANNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQHQ
Sbjct: 181 TTTTPSYDEEKYNDDDDNNNFYANNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQHQ 240

Query: 241 SRSSRNNFRNNNNYNRYEYGNSMGRYQNDETEFQEESDEFVP 283
           SRSSRNNFRNNNNYNRYEYGNSMGRYQNDETEFQEESDEFVP
Sbjct: 241 SRSSRNNFRNNNNYNRYEYGNSMGRYQNDETEFQEESDEFVP 282

[Close]

BLAST of Carg07764 vs. NCBI nr
Match: XP_022926835.1 (protein E6 [Cucurbita moschata])

HSP 1 Score: 531.6 bits (1368), Expect = 4.2e-147
Identity = 276/283 (97.53%), Postives = 279/283 (98.59%), Query Frame = 0


Query: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLTTSEKTTTPQDQD 60
           MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLT SEKTTTPQDQD
Sbjct: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLTNSEKTTTPQDQD 60

Query: 61  PNFIPQTQDNGYGLYGHESGQFSPSDAKFSDPNARTGGRPFSTTTTYDDGENNYKRNDDV 120
           PNFIPQTQDNGYGLYGHESGQFSPSDAKFSDPNARTGGRPFSTTTTYDDGENNYKRNDDV
Sbjct: 61  PNFIPQTQDNGYGLYGHESGQFSPSDAKFSDPNARTGGRPFSTTTTYDDGENNYKRNDDV 120

Query: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSRNEYA- 180
           SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSRNEYA 
Sbjct: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSRNEYAT 180

Query: 181 ATTTTPSYDEEKYNDDDDNNNFYANNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQH 240
            TTTTPSYDEEKYNDD++NNNFYANNRNDNENNVARQGMSDTRFMENGKYFYDL+REPQH
Sbjct: 181 TTTTTPSYDEEKYNDDNNNNNFYANNRNDNENNVARQGMSDTRFMENGKYFYDLHREPQH 240

Query: 241 QSRSSRNNFRNNNNYNRYEYGNSMGRYQNDETEFQEESDEFVP 283
           QSRSSRNNFRNNNNYN YEYGNSMGRYQNDETEFQEESDEFVP
Sbjct: 241 QSRSSRNNFRNNNNYNTYEYGNSMGRYQNDETEFQEESDEFVP 283

[Close]

BLAST of Carg07764 vs. NCBI nr
Match: XP_023003783.1 (protein E6-like [Cucurbita maxima])

HSP 1 Score: 508.8 bits (1309), Expect = 2.9e-140
Identity = 266/285 (93.33%), Postives = 273/285 (95.79%), Query Frame = 0


Query: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLTTSEKTTTPQDQD 60
           MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGE+QIPN VDPLT SEKTT+PQDQD
Sbjct: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGETQIPNTVDPLTNSEKTTSPQDQD 60

Query: 61  PNFIPQTQDNGYGLYGHESGQFSPSDAKFSDPNARTGGRPFSTTTTYDDGENNYKRNDDV 120
           PNFIPQTQDNGYGLYGHES QFSPSD+KFSDPNARTGGRPF+TTTTYDDGENNYKRNDDV
Sbjct: 61  PNFIPQTQDNGYGLYGHESTQFSPSDSKFSDPNARTGGRPFTTTTTYDDGENNYKRNDDV 120

Query: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSRNEYAA 180
           SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNT LSR+EY  
Sbjct: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTLLSRDEYTT 180

Query: 181 TTTTPSYDEEKYNDDD-DNNNFYANNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQH 240
           TTTTPSYDEEKYN+DD +NNNFY NNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQH
Sbjct: 181 TTTTPSYDEEKYNEDDNNNNNFYVNNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQH 240

Query: 241 QSRSSRNNFRNN--NNYNRYEYGNSMGRYQNDETEFQEESDEFVP 283
           QSR SRNNFRNN  NNYN YEYGNSMGRYQNDETEFQEESDEFVP
Sbjct: 241 QSRPSRNNFRNNNYNNYNTYEYGNSMGRYQNDETEFQEESDEFVP 285

[Close]

BLAST of Carg07764 vs. NCBI nr
Match: XP_023517993.1 (protein E6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 506.9 bits (1304), Expect = 1.1e-139
Identity = 266/282 (94.33%), Postives = 271/282 (96.10%), Query Frame = 0


Query: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLTTSEKTTTPQDQD 60
           MASSTKLLSL LLSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLT SEKTT PQDQD
Sbjct: 1   MASSTKLLSLLLLSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLTNSEKTTNPQDQD 60

Query: 61  PNFIPQTQDNGYGLYGHESGQFSPSDAKFSDPNARTGGRPFSTTTTYDDGENNYKRNDDV 120
           PNFIPQTQDNGYGLYGHES QFS SDAKFSDPNARTGGRPF+TTTTYDDGENNYKRNDDV
Sbjct: 61  PNFIPQTQDNGYGLYGHESAQFSTSDAKFSDPNARTGGRPFTTTTTYDDGENNYKRNDDV 120

Query: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSRNEYAA 180
           SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSRNEY A
Sbjct: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSRNEY-A 180

Query: 181 TTTTPSYDEEKYNDDDDNNNFYANNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQHQ 240
           TTTTPSYDEEKYN DD+NNNFY NNR+DNENN+ARQGMSDTRFMENGKYFYDLNREPQHQ
Sbjct: 181 TTTTPSYDEEKYN-DDNNNNFYVNNRDDNENNMARQGMSDTRFMENGKYFYDLNREPQHQ 240

Query: 241 SRSSRNNFRNNNNYNRYEYGNSMGRYQNDETEFQEESDEFVP 283
           SR SRNNFRNNNNYN  +YGNSMGRYQNDETEFQEESDEFVP
Sbjct: 241 SRPSRNNFRNNNNYNTNQYGNSMGRYQNDETEFQEESDEFVP 280

[Close]

BLAST of Carg07764 vs. ExPASy Swiss-Prot
Match: Q01197 (Protein E6 OS=Gossypium hirsutum OX=3635 GN=E6 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.4e-22
Identity = 106/292 (36.30%), Postives = 146/292 (50.00%), Query Frame = 0


Query: 1   MASSTKLLS---LFLLSLFFIQIHGRESNFFSKVPN---NNGESQIPNKVDPLTTSEKTT 60
           MASS KL S   LFL +LF +QIH RE  +FSK P    N  E+    +       + T 
Sbjct: 1   MASSPKLFSMSILFLFALFSMQIHARE--YFSKFPRVNINEKETTTREQKHETFVPQTTQ 60

Query: 61  TPQDQDPNFIPQTQDNGYGLYGHESGQFSPSDAKFSDPNARTGGRPFSTTTTYDDGENNY 120
            P++Q+P FIP+TQ NGYGLYGHESG   PS               F+T  TY+      
Sbjct: 61  KPEEQEPRFIPETQ-NGYGLYGHESGSSRPS---------------FTTKETYEPYVTPV 120

Query: 121 KRNDDVSYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLS 180
           + + D  Y S  E     +NN               ++++YYNK+ Y++ +Q        
Sbjct: 121 RFHPDEPYNSIPES----SNN---------------KDTYYYNKNAYESTKQ-------- 180

Query: 181 RNEYAATTTTPSYDEEKYNDDDDNNNFYANNRNDNENNVARQGMSDTRFMENGKYFYDLN 240
           +N   A  T   +  +    ++ NNN+Y  N N+  NN  +QGMSDTR++ENGKY+YD+ 
Sbjct: 181 QNLGEAIFTEKGWSTK----ENQNNNYY--NGNNGYNNGEKQGMSDTRYLENGKYYYDVK 238

Query: 241 RE----PQHQSRSSRNNFRNNNNYNRYEYGNSMGRYQNDETEFQEESDEFVP 283
            E    P     S     RN  N NRY   N+MGRY  ++ EF+E  +EF P
Sbjct: 241 SENNYYPNRFDNSRGVASRNEFNENRY---NNMGRYHQNQEEFEESEEEFEP 238

[Close]

BLAST of Carg07764 vs. ExPASy TrEMBL
Match: A0A6J1EM79 (protein E6 OS=Cucurbita moschata OX=3662 GN=LOC111433831 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.0e-147
Identity = 276/283 (97.53%), Postives = 279/283 (98.59%), Query Frame = 0


Query: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLTTSEKTTTPQDQD 60
           MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLT SEKTTTPQDQD
Sbjct: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLTNSEKTTTPQDQD 60

Query: 61  PNFIPQTQDNGYGLYGHESGQFSPSDAKFSDPNARTGGRPFSTTTTYDDGENNYKRNDDV 120
           PNFIPQTQDNGYGLYGHESGQFSPSDAKFSDPNARTGGRPFSTTTTYDDGENNYKRNDDV
Sbjct: 61  PNFIPQTQDNGYGLYGHESGQFSPSDAKFSDPNARTGGRPFSTTTTYDDGENNYKRNDDV 120

Query: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSRNEYA- 180
           SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSRNEYA 
Sbjct: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSRNEYAT 180

Query: 181 ATTTTPSYDEEKYNDDDDNNNFYANNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQH 240
            TTTTPSYDEEKYNDD++NNNFYANNRNDNENNVARQGMSDTRFMENGKYFYDL+REPQH
Sbjct: 181 TTTTTPSYDEEKYNDDNNNNNFYANNRNDNENNVARQGMSDTRFMENGKYFYDLHREPQH 240

Query: 241 QSRSSRNNFRNNNNYNRYEYGNSMGRYQNDETEFQEESDEFVP 283
           QSRSSRNNFRNNNNYN YEYGNSMGRYQNDETEFQEESDEFVP
Sbjct: 241 QSRSSRNNFRNNNNYNTYEYGNSMGRYQNDETEFQEESDEFVP 283

[Close]

BLAST of Carg07764 vs. ExPASy TrEMBL
Match: A0A6J1KXL8 (protein E6-like OS=Cucurbita maxima OX=3661 GN=LOC111497261 PE=4 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 1.4e-140
Identity = 266/285 (93.33%), Postives = 273/285 (95.79%), Query Frame = 0


Query: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLTTSEKTTTPQDQD 60
           MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGE+QIPN VDPLT SEKTT+PQDQD
Sbjct: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGETQIPNTVDPLTNSEKTTSPQDQD 60

Query: 61  PNFIPQTQDNGYGLYGHESGQFSPSDAKFSDPNARTGGRPFSTTTTYDDGENNYKRNDDV 120
           PNFIPQTQDNGYGLYGHES QFSPSD+KFSDPNARTGGRPF+TTTTYDDGENNYKRNDDV
Sbjct: 61  PNFIPQTQDNGYGLYGHESTQFSPSDSKFSDPNARTGGRPFTTTTTYDDGENNYKRNDDV 120

Query: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSRNEYAA 180
           SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNT LSR+EY  
Sbjct: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTLLSRDEYTT 180

Query: 181 TTTTPSYDEEKYNDDD-DNNNFYANNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQH 240
           TTTTPSYDEEKYN+DD +NNNFY NNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQH
Sbjct: 181 TTTTPSYDEEKYNEDDNNNNNFYVNNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQH 240

Query: 241 QSRSSRNNFRNN--NNYNRYEYGNSMGRYQNDETEFQEESDEFVP 283
           QSR SRNNFRNN  NNYN YEYGNSMGRYQNDETEFQEESDEFVP
Sbjct: 241 QSRPSRNNFRNNNYNNYNTYEYGNSMGRYQNDETEFQEESDEFVP 285

[Close]

BLAST of Carg07764 vs. ExPASy TrEMBL
Match: A0A5D3CMI3 (Protein E6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007690 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 7.9e-83
Identity = 206/307 (67.10%), Postives = 231/307 (75.24%), Query Frame = 0


Query: 1   MASSTKLL-SLFLLSLFFIQIHGRESN-FFSKVPNNN----------GESQIPN--KVDP 60
           MASS KL  S+ +L+L FIQIH RES  FFSK+PNNN           E+QIPN   VDP
Sbjct: 1   MASSPKLFTSILILTLLFIQIHARESKYFFSKIPNNNVHNNNNNFDAKETQIPNDENVDP 60

Query: 61  LTTSEKTTT-PQDQDPNFIPQTQDNGYGLYGHESGQFSP-SDAKFSDPNARTGGRPFSTT 120
           LT  EKTTT PQDQ PNFIPQTQDNGYGLYGHESGQ  P SD+KF   N+R  GR F+TT
Sbjct: 61  LTNPEKTTTSPQDQQPNFIPQTQDNGYGLYGHESGQLPPNSDSKFFSDNSRENGRSFTTT 120

Query: 121 TTYDDGENNYKRNDDVS-YKSESEEYYNYNNNYNNDNFQ---NSNWKKPYENSFYYNKDL 180
           TTYD+ +N + RND VS YKSESEEYYNY +N NN+NFQ   NSN  KPYENSFYYNKDL
Sbjct: 121 TTYDNNDNKF-RNDVVSNYKSESEEYYNYEDNNNNNNFQTFENSN-SKPYENSFYYNKDL 180

Query: 181 YDNRRQSFQNTRLSRNEYAATTTTPSYDEEKYNDDDDNNNFYANNRNDNENNVARQGMSD 240
           YDN RQSFQNTRLSR++Y   TTTP YD+ KY++  ++NN   +N N+N NN+ RQGMSD
Sbjct: 181 YDNGRQSFQNTRLSRDDY---TTTPLYDQGKYDNFYNSNNGGGDN-NNNGNNMVRQGMSD 240

Query: 241 TRFMENGKYFYDLNREPQHQSRSS---RNNFRNNNNYNRYEYGNSMGRY--QNDETEFQE 283
           TRFMENGKY+YDL+REP H SRS     NN  NNNN N YEYGNSMGRY  QNDE EFQE
Sbjct: 241 TRFMENGKYYYDLDREPHHYSRSRGYFGNNINNNNNRNSYEYGNSMGRYQNQNDEAEFQE 300

[Close]

BLAST of Carg07764 vs. ExPASy TrEMBL
Match: A0A1S3B2M6 (protein E6 OS=Cucumis melo OX=3656 GN=LOC103485307 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 1.0e-82
Identity = 206/308 (66.88%), Postives = 231/308 (75.00%), Query Frame = 0


Query: 1   MASSTKLL-SLFLLSLFFIQIHGRESN-FFSKVPNNN-----------GESQIPN--KVD 60
           MASS KL  S+ +L+L FIQIH RES  FFSK+PNNN            E+QIPN   VD
Sbjct: 1   MASSPKLFTSILILTLLFIQIHARESKYFFSKIPNNNVDNNNNNNFDAKETQIPNDENVD 60

Query: 61  PLTTSEKTTT-PQDQDPNFIPQTQDNGYGLYGHESGQFSP-SDAKFSDPNARTGGRPFST 120
           PLT  EKTTT PQDQ PNFIPQTQDNGYGLYGHESGQ  P SD+KF   N+R  GR F+T
Sbjct: 61  PLTNPEKTTTSPQDQQPNFIPQTQDNGYGLYGHESGQLPPNSDSKFFSDNSRENGRSFTT 120

Query: 121 TTTYDDGENNYKRNDDVS-YKSESEEYYNYNNNYNNDNFQ---NSNWKKPYENSFYYNKD 180
           TTTYD+ +N + RND VS YKSESEEYYNY +N NN+NFQ   NSN  KPYENSFYYNKD
Sbjct: 121 TTTYDNNDNKF-RNDVVSNYKSESEEYYNYEDNNNNNNFQTFENSN-SKPYENSFYYNKD 180

Query: 181 LYDNRRQSFQNTRLSRNEYAATTTTPSYDEEKYNDDDDNNNFYANNRNDNENNVARQGMS 240
           LYDN RQSFQNTRLSR++Y   TTTP YD+ KY++  ++NN   +N N+N NN+ RQGMS
Sbjct: 181 LYDNGRQSFQNTRLSRDDY---TTTPLYDQGKYDNFYNSNNGGGDN-NNNGNNMVRQGMS 240

Query: 241 DTRFMENGKYFYDLNREPQHQSRSS---RNNFRNNNNYNRYEYGNSMGRY--QNDETEFQ 283
           DTRFMENGKY+YDL+REP H SRS     NN  NNNN N YEYGNSMGRY  QNDE EFQ
Sbjct: 241 DTRFMENGKYYYDLDREPHHYSRSRGYFGNNINNNNNRNSYEYGNSMGRYQNQNDEAEFQ 300

[Close]

BLAST of Carg07764 vs. ExPASy TrEMBL
Match: A0A6J1IU58 (protein E6-like OS=Cucurbita maxima OX=3661 GN=LOC111478608 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.4e-82
Identity = 198/296 (66.89%), Postives = 221/296 (74.66%), Query Frame = 0


Query: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNG-----ESQIPNK---VDPLTTSEK 60
           MASSTKL+S  LL+L FIQ+H RES+FFSKVPNN G     E+QIPNK    DPLT  +K
Sbjct: 1   MASSTKLISTLLLALLFIQVHARESHFFSKVPNNGGTFYTKETQIPNKEEEEDPLTNPQK 60

Query: 61  TT-TPQDQDPNFIPQTQDNGYGLYGHESGQFSP-SDAKFSDPNARTGGRPFSTTTTYDDG 120
           T+ TPQD DPNF+PQTQDN YGLYGHESGQ  P SD  FS      G RP          
Sbjct: 61  TSGTPQDHDPNFLPQTQDNNYGLYGHESGQLPPNSDDNFS------GDRP---------D 120

Query: 121 ENNYKRNDDVSYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQN 180
           +N Y+RND VSYKSESEE+      Y+NDNFQN N  KPYENSFYYNKDLYDN RQSF+N
Sbjct: 121 DNKYRRNDAVSYKSESEEF------YDNDNFQNGN-TKPYENSFYYNKDLYDNGRQSFRN 180

Query: 181 TRLSRNEYAATTTTPSYDEEKYNDDDDNNNFYANNRNDNENNVARQGMSDTRFMENGKYF 240
           TRLSRN+Y   TTTP Y++EKY+DDDDNN +Y +N N+N NNV RQGMSDTRFMENGKY+
Sbjct: 181 TRLSRNDY---TTTPLYNQEKYHDDDDNNFYYNSNNNNNANNVVRQGMSDTRFMENGKYY 240

Query: 241 YDLNREPQHQSRSSRNNFR--NNNNYNRYEYGNSMGRY--QNDETEFQEESDEFVP 283
           YDL+REP H SR SR  FR  NNNN N Y+YGNSMGRY  QNDE EFQEE DEFVP
Sbjct: 241 YDLDREPHHYSR-SRGYFRTNNNNNGNTYKYGNSMGRYQNQNDEAEFQEELDEFVP 270

[Close]

BLAST of Carg07764 vs. TAIR 10
Match: AT1G28400.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33850.1); Has 45374 Blast hits to 18870 proteins in 668 species: Archae - 72; Bacteria - 1460; Metazoa - 1191; Fungi - 1038; Plants - 174; Viruses - 64; Other Eukaryotes - 41375 (source: NCBI BLink). )

HSP 1 Score: 89.7 bits (221), Expect = 4.0e-18
Identity = 106/314 (33.76%), Postives = 150/314 (47.77%), Query Frame = 0


Query: 1   MASSTKLLSLFL---LSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLTTSEKTTT-- 60
           MA ST+   LF    L L   QIH R+S FF K    + + Q PN   PL TSEKTT   
Sbjct: 1   MAFSTRGSLLFFFTTLVLLSTQIHARDSYFFGKFHRESPKDQNPNSFIPLETSEKTTVEE 60

Query: 61  ------PQDQDPNFIPQTQDNGYGLYGHESGQFSPSDAK--FSDPN---ARTGGRPFSTT 120
                  Q+QDP F+P++  NGYGLYGHE+   + +D K  F++ N    +   + FST 
Sbjct: 61  SVLNKKEQEQDPTFVPES-GNGYGLYGHETTYNNNNDNKEEFNNNNKNDEKVNSKTFSTP 120

Query: 121 TTYDDGE--NNYKRNDDVSYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYD 180
           +  +  E  NNY+ N    Y  ++E Y      YNN+ F N+N K        +N + YD
Sbjct: 121 SLSETEESFNNYEEN----YPKKTENY--GTKGYNNEEFNNNNNKYDANFKEEFNNNKYD 180

Query: 181 NR--RQSFQNTRLSRN---EYAATTTTPSYDEEKYNDDDDNNNFYANNRNDNE------- 240
               ++ F N   + N   +Y       S+ E   N++D+  N Y +N    E       
Sbjct: 181 ENYAKEEFNNNNNNNNYNYKYDENVKEESFPE---NNEDNKKNVYNSNAYGTELERETPY 240

Query: 241 ----NNVARQGMSDTRFMENGKYFYDLNREPQHQSRSSRNNFRNNNNYNRYEYGNSMGRY 278
               +N+ RQGMSDTRFME G Y+YDL             N RN+ +Y R  +  S   Y
Sbjct: 241 KGYSHNLERQGMSDTRFMEKGSYYYDL------------YNDRNHGHYYRKSHSKSPAGY 292

[Close]

BLAST of Carg07764 vs. TAIR 10
Match: AT2G33850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28400.1); Has 3053 Blast hits to 2119 proteins in 133 species: Archae - 6; Bacteria - 52; Metazoa - 135; Fungi - 96; Plants - 73; Viruses - 2; Other Eukaryotes - 2689 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 1.9e-12
Identity = 89/297 (29.97%), Postives = 134/297 (45.12%), Query Frame = 0


Query: 3   SSTKLLSLFLLS--LFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLTTSEKTTTPQDQD 62
           S++  L  FLL+  LF  QI  R S  F K    + + Q PN + P+ T+EK   P DQ+
Sbjct: 4   STSSCLFFFLLTLVLFSTQISARNSYSFGKFQREDPKEQNPNNLVPIETNEK-KEPDDQN 63

Query: 63  PNFIPQTQDNGYGLYGHESGQFSPSDAKFSDPNARTGGRPFSTTTTYDDGENNYKRNDDV 122
           P FIPQ+ +NGYGLYGHE                        TT   ++  NN K  D+V
Sbjct: 64  PAFIPQS-ENGYGLYGHE------------------------TTDNNNEELNNNKYEDNV 123

Query: 123 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQS--FQNTRLSRNEY 182
           +Y        +++    ++  Q     K Y+ S+    ++YDN + +  ++N+     + 
Sbjct: 124 NYDD------SFSTPSLSETAQTQESYKNYKESYPKTTEIYDNNKDTSYYENSNAYGTDK 183

Query: 183 AATTTTPSYDEEKYNDDD--DNNNFYANNRNDNE-------NNVARQGMSDTRFMENGKY 242
                   Y      D    +N N Y   + + E       NNV RQGMSDTR+M NGKY
Sbjct: 184 RDNDINDPYKGYSNKDTSYYENPNTYGTEKREKEPAYRGYNNNVERQGMSDTRYMANGKY 243

Query: 243 FYDLNREPQHQSRSSRNNFRN----NNNYNRYEYGNSMGRYQNDETEFQEESDEFVP 283
           +YDL+ +  H  R  +N++ N      N  +  + N     Q  E   +E+ D+  P
Sbjct: 244 YYDLDDDRNH-GRFYQNHYYNYKPTGYNEKKSNFKNPYDSNQQSEMLGEEQGDQITP 267

The following BLAST results are available for this feature:

BLAST of Carg07764 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026556.1	5.7e-152	100.00	Protein E6, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6594586.1	2.2e-151	99.65	Protein E6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022926835.1	4.2e-147	97.53	protein E6 [Cucurbita moschata]	[more]
XP_023003783.1	2.9e-140	93.33	protein E6-like [Cucurbita maxima]	[more]
XP_023517993.1	1.1e-139	94.33	protein E6-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg07764 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q01197	3.4e-22	36.30	Protein E6 OS=Gossypium hirsutum OX=3635 GN=E6 PE=2 SV=1	[more]

BLAST of Carg07764 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EM79	2.0e-147	97.53	protein E6 OS=Cucurbita moschata OX=3662 GN=LOC111433831 PE=4 SV=1	[more]
A0A6J1KXL8	1.4e-140	93.33	protein E6-like OS=Cucurbita maxima OX=3661 GN=LOC111497261 PE=4 SV=1	[more]
A0A5D3CMI3	7.9e-83	67.10	Protein E6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007690 PE...	[more]
A0A1S3B2M6	1.0e-82	66.88	protein E6 OS=Cucumis melo OX=3656 GN=LOC103485307 PE=4 SV=1	[more]
A0A6J1IU58	1.4e-82	66.89	protein E6-like OS=Cucurbita maxima OX=3661 GN=LOC111478608 PE=4 SV=1	[more]

BLAST of Carg07764 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28400.1	4.0e-18	33.76	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G33850.1	1.9e-12	29.97	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..74
None	No IPR available	PANTHER	PTHR35274:SF2	E6-LIKE PROTEIN	coord: 1..282
IPR040290	Protein E6-like	PANTHER	PTHR35274	E6-LIKE PROTEIN	coord: 1..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07764-RA	Carg07764-RA	mRNA