Carg07756 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07756
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	OPA3-like protein
Location	Carg_Chr07: 1032185 .. 1035959 (-)
RNA-Seq Expression	Carg07756
Synteny	Carg07756

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTCCCCTCGTCAAATATTGCTCGCGGGAAACCTAAACCATTTGCCCATTTGGCGACTTCGCTCCAACGGTTCCTCGATCGCAAATGGCTTGTCTTCATCTTCTCTGACTATTCAATTCGTTGACATTCATTGGCTCTGACCGTGTGTTGTTAATTCCCGAAGAACAGCAAAAGCGAAGCCTTCGAATCAGATTACCGAATTTATTCGTTGTAGTCATGGTACTCCCGGTACTGAAGCTCGGAACGCTCGTGTTGAAAACTCTGAGCAAGCCACTTGGTAATAGGCTCAAGAAGCAAGCTGCGTTGCACCCCAGATTTAGGCAGTCTATCATCAATTTCGCCCAGGTATTTATAATTTCGTTCTGGATTTCTGCTTATGGGTTCTTGATTCTTTGGTTGTGCTTCATTATGTTGTACTGATTTATACAAGATCATGTTTCGTTGAGTTCAGCTATTGTTAATGCAGCAAATAATTCGGCGCCCCTTTCATGGACTTCTTTCAAACGTTTCTTCTGATTGGTTGGTTTTGATCATTGTTTTATGCGTTACCTTCTTCTCAAGTAGTTGTGCTTGTTGGGTCAAGAAGTTCTTCAAACTTGCCCCATTCCAAATGAAATTGCTTCGTACGACAATGAATCCTCATCTTACATGAAATTAAGAAGCTCTTCAACTTAACCCCATTTAATTTTAACTGGTAAACTTTAGAGAACGATGTTATATTATAACCAAAATCCAGCTAAAAGCAATTGCCATGTATTAAAATTTCTGAGCATTATCTGGAGATGGTCACTAGTTATCATTCTATTGGCTGGAACACTCTGACAATTTTACACAAATAGCTGTAGGTCCAAGGATGAGGATTATGTATGAATTTCATCAATTCCAAAGTTAATAAGGCCTATCTAAGAACGTAATGGAACAAATACGAGGGGCTAGCTTTAGCTGTCTTTCATCTCTTATAAAATGACCAACTGTATACTTGTCAGGACTAGCAATCTAATTGGGATCTTTTATTTATAACTTTTTTGTTTGTGTTTGGGCTAGCTAAGCTAATGAGATAACTTCTTGACCATATAATATTTTTTTGCCATGTAAACTCGATTCTAATGATGCTCATTAGAATTTAGTTGAAAGATTGCCTTCCTATTCTCTTCTTCATCGAACAATCTCTTGAGCCCGTATCTGTTTTAGAGATGAGCCTCAAATCCAATCTATCAGCTAAAAGTCTTTCCTCAAGAAAGGGCCTTAGAATGAGCAAGGAACTTGTAACAATTTCATTCTCCGAACTATGTTGGAATTCCTTGAAAGGATGCTAGGGGAAAGTTCTCTTTTCTTTAATCCGAACTAATTTTGGTGGCCCTGCTTCAACAATTGTAGCTGACTCTCGTGGTGCCAAAATACCTGTAACGACCTAGATCCACTGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTCAAGGCTTTAAAACGCGTCTGCTAGGGGAAGGTTTCCACACTCCAAAGAAGGATAATATCTACTAGTGGTGGGCCTGGTTCGTTACAATACCTCTCTTCTAACTTCATTTTTGTTCTTTCTCCATTTTTTTTGTTAAAAAATTTCCAAGAGTAGTAATATCCACTTAAAGCCTCAGAGGTATAAGGGGAAGAAATTTGTGAAGTAATATCCACTTTAGTTGATTGGATACTTCCAAATACTTTTCTGTCGCAGGTGTTGTGTTTCTCCTTTACAGACGTAACTTCATCAGGAATGCCAGCCATGCTATATGACAATGGAGTCTTACCTTCATTCATACATAAGCGATGAGATTTAGTTTTTCAATTATAGATGCTTTAGAAAGTATGATCCTCAAAGGGTTAGTTTGCATTGATTGTTTAAGGAGACACTTAGGTATCAGAATTAAAGTGGGTGCTTCATGTTTGAATGTATGTTTGTATACTGCTAGCTTTACTTATGAATAATTCTTAAGACCGCATTTCTTCAATGCTAAAACTGACAGATTAACCATCGGATGTCAACACAAATGCAAAGACGCATATATGGTCATGCAACTGACGTAGAAATTCGCCCTCTGGATGAGGAGAAAGCAGTTCAGGCTGCTGTTGACCTGATTGGCGAGGTTTTTGTTTTCTCGGTAATATTCATTTTCAAGTAGAATCGCTTCCTTTTCTTTTGGTTAAGACCATTCCTAAACTGAAACATACTATATACCATGTTACAGCAAGTATTGATCAACTATATATTTCACGGATATTTAGCATTGTATTTTGGAAACTAAGGAGCTCATTTGTGAACCATTGTGCATACTTATGATTATAAGAAAATATCAACTAAGCGCTGTTTTATTTTGGGGTTCATTTTACCTTCGATGGAATTATGCATCGATAATCTGCTCAGGTATTTGGGGTCTGGAAACCCCCAGTTGAGAATCTGAGACCTATCAGGAATACAACTCTTTGGACAAAGATGCAAGAGAAAATGTGTATATATGGAACGGCCCAAATCCATAGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGAGCTTCCCCTCAAGGTTTTTAAAACGCATCTATTAGGGAGAGGTTTCCACACCTTCATAAAAAATGCTACGTCCCCCTCTCCCACCGATGTGGGATCACAATCCACCCCACTTTGGGGCCCAATGTTCTCGCTGGCAATTGTTCCCCTCTCCAATCAATGTGGGATCTCACAATCCACCCCTCTACGGGGCCCGGCGTCCTCGCTGGCACTTTGCCTAGTGTCGGGCTTTGATACTATTTGTGACAGCCCAAACCCACCGCTATCAGATATTGTCCTCTTTGAGCTTTCTCCTCAAGGTTTTATAATGCACCTGTTGGGGAGATGTTTCCACACTCTTATAAGGAATGTTTCGTTCTCCTCTCATCCAACGTGGGATCTCACAATATAACTGTTGGGAGTTTGACTTATTGTGCTTGGCTGCTTGAAAACTTTTTTTGACCTCTTCATTTTATTGATTATTTCTTTTACGTTTTAGTTTCTGGAAATTTATAGGTTGCAGGAGCAATCGTGGTATTTGAGGTTCAGAGAAGTGCTAGATCAGAAGCCAGAAAAGAAGAAGTACGCAGACAAGAAATGGAGGTAGTGGTATAGTTATTTTCTCCTGGGGCATAAGAGCACAAAACTTCACAGATCACATTTTGCTCAAAGTAGTATGGTTGTTTGAATTCACTTACTTGGTAACCTACTTGAATGGAGCTGAACTGAGGTAAGGTTATGATTTATGGATACAGGAATGAATCCTTCGACCCTAAGAAATATTACTGTTGGAATAACGGATCAGGGGTCTGCGACAAAGTGAACTCATTCCCATAGCGAATCAACTCCTATATTCCTCGCCACTTCTTGCCTCTCCCATCCAATTGTGTAATTTCTTGGCCAATCCAACCCCACGTCCCCAAACCCATCTTCATTAACTTAAACATATTAGTTTAACTGGTTAAGATATATACTTAGACTAAGTTCTCTGATGTGGTTTATTACATTTAGGCACTGAGGCAGAGAGACGAAAGCTTATCAACAGAATTGGAACTTCTGCAGCAAAAACTAGTAGAACTGGAACAACATGCCAGAGGACGAGGTCTCAGTGGTATTTTGAACTTCAAACACACTCCCTCTGAAAGTGGAAGTTTAGCAAAGCCGCCTGCTTGATTAAGTTGCTAGTTTGTCCAGCGAGAAATGTGGTGATGATTTAATCAACGTGGTCTTGAAAAACGGAGGTGCATTTTCCT

mRNA sequence

AATTCCCCTCGTCAAATATTGCTCGCGGGAAACCTAAACCATTTGCCCATTTGGCGACTTCGCTCCAACGGTTCCTCGATCGCAAATGGCTTGTCTTCATCTTCTCTGACTATTCAATTCGTTGACATTCATTGGCTCTGACCGTGTGTTGTTAATTCCCGAAGAACAGCAAAAGCGAAGCCTTCGAATCAGATTACCGAATTTATTCGTTGTAGTCATGGTACTCCCGGTACTGAAGCTCGGAACGCTCGTGTTGAAAACTCTGAGCAAGCCACTTGGTAATAGGCTCAAGAAGCAAGCTGCGTTGCACCCCAGATTTAGGCAGTCTATCATCAATTTCGCCCAGATTAACCATCGGATGTCAACACAAATGCAAAGACGCATATATGGTCATGCAACTGACGTAGAAATTCGCCCTCTGGATGAGGAGAAAGCAGTTCAGGCTGCTGTTGACCTGATTGGCGAGGTTTTTGTTTTCTCGGTTGCAGGAGCAATCGTGGTATTTGAGGTTCAGAGAAGTGCTAGATCAGAAGCCAGAAAAGAAGAAGTACGCAGACAAGAAATGGAGGCACTGAGGCAGAGAGACGAAAGCTTATCAACAGAATTGGAACTTCTGCAGCAAAAACTAGTAGAACTGGAACAACATGCCAGAGGACGAGGTCTCAGTGGTATTTTGAACTTCAAACACACTCCCTCTGAAAGTGGAAGTTTAGCAAAGCCGCCTGCTTGATTAAGTTGCTAGTTTGTCCAGCGAGAAATGTGGTGATGATTTAATCAACGTGGTCTTGAAAAACGGAGGTGCATTTTCCT

Coding sequence (CDS)

ATGGTACTCCCGGTACTGAAGCTCGGAACGCTCGTGTTGAAAACTCTGAGCAAGCCACTTGGTAATAGGCTCAAGAAGCAAGCTGCGTTGCACCCCAGATTTAGGCAGTCTATCATCAATTTCGCCCAGATTAACCATCGGATGTCAACACAAATGCAAAGACGCATATATGGTCATGCAACTGACGTAGAAATTCGCCCTCTGGATGAGGAGAAAGCAGTTCAGGCTGCTGTTGACCTGATTGGCGAGGTTTTTGTTTTCTCGGTTGCAGGAGCAATCGTGGTATTTGAGGTTCAGAGAAGTGCTAGATCAGAAGCCAGAAAAGAAGAAGTACGCAGACAAGAAATGGAGGCACTGAGGCAGAGAGACGAAAGCTTATCAACAGAATTGGAACTTCTGCAGCAAAAACTAGTAGAACTGGAACAACATGCCAGAGGACGAGGTCTCAGTGGTATTTTGAACTTCAAACACACTCCCTCTGAAAGTGGAAGTTTAGCAAAGCCGCCTGCTTGA

Protein sequence

MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALRQRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAKPPA

Homology

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BLAST of Carg07756 vs. NCBI nr
Match: KAG7026548.1 (hypothetical protein SDJN02_10550 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 312.4 bits (799), Expect = 2.4e-81
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA
Sbjct: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120

Query: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAKPPA 171
           QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAKPPA
Sbjct: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAKPPA 170

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BLAST of Carg07756 vs. NCBI nr
Match: XP_023517385.1 (OPA3-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310.8 bits (795), Expect = 7.1e-81
Identity = 168/170 (98.82%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA
Sbjct: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIV+FEVQRSARSEARKEEVRRQEMEALR
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEEVRRQEMEALR 120

Query: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAKPPA 171
           QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESG+LAKPPA
Sbjct: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGNLAKPPA 170

[Close]

BLAST of Carg07756 vs. NCBI nr
Match: XP_022926359.1 (OPA3-like protein [Cucurbita moschata])

HSP 1 Score: 307.4 bits (786), Expect = 7.8e-80
Identity = 166/170 (97.65%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIIN AQINHRMSTQMQRRIYGHA
Sbjct: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINLAQINHRMSTQMQRRIYGHA 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIV+FEVQRSARSEARK+EVRRQEMEALR
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKDEVRRQEMEALR 120

Query: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAKPPA 171
           QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESG+LAKPPA
Sbjct: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGNLAKPPA 170

[Close]

BLAST of Carg07756 vs. NCBI nr
Match: XP_023003845.1 (OPA3-like protein [Cucurbita maxima])

HSP 1 Score: 303.9 bits (777), Expect = 8.6e-79
Identity = 165/168 (98.21%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIIN AQINHRMSTQMQRRIYGHA
Sbjct: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINVAQINHRMSTQMQRRIYGHA 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIV+FEVQRSARSEARKEEVRRQEMEALR
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEEVRRQEMEALR 120

Query: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAKP 169
           QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESG+LAKP
Sbjct: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGNLAKP 168

[Close]

BLAST of Carg07756 vs. NCBI nr
Match: KAG6594576.1 (hypothetical protein SDJN03_11129, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 275.8 bits (704), Expect = 2.5e-70
Identity = 150/153 (98.04%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA
Sbjct: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIV+FEVQRSARS+ARKEEVRRQEMEALR
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSDARKEEVRRQEMEALR 120

Query: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGIL 154
           QRDESLSTELELLQQKLVELEQHARGRGLSG+L
Sbjct: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGVL 153

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BLAST of Carg07756 vs. ExPASy Swiss-Prot
Match: Q9P7W0 (OPA3-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC1703.11 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.5e-12
Identity = 49/141 (34.75%), Postives = 81/141 (57.45%), Query Frame = 0


Query: 6   LKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQ--RRIYGHATDV 65
           LK+G+L+++TLSKP+ N +K QA  H  FR++ I FAQ  HR   ++    R      +V
Sbjct: 6   LKIGSLLVRTLSKPIANTIKAQAKEHKAFRKACIEFAQWMHRAEFRITGINRAKSGGANV 65

Query: 66  EIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALRQRD 125
            +RPL++ KAV A    + E F+F+VAG  ++FE  R+ R E  + +   + +  L+   
Sbjct: 66  RLRPLNDAKAVDAGATFLSETFIFTVAGGAILFETWRARRKEKNRRDEVAEAILGLQHEI 125

Query: 126 ESLSTELE---LLQQKLVELE 142
             ++  +E   +LQ+K  EL+
Sbjct: 126 VRINEIMEKQFVLQKKKNELQ 146

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BLAST of Carg07756 vs. ExPASy Swiss-Prot
Match: Q54NW1 (OPA3-like protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0284959 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.6e-09
Identity = 41/140 (29.29%), Postives = 83/140 (59.29%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLP+LK+G+L++K+L+KPL  ++K +A+  P F   ++  A++ H++  ++ +  +   
Sbjct: 1   MVLPLLKVGSLLIKSLAKPLSKQIKIRASKSPIFHDRVVRGARLWHKLDLKLTK--FNGD 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           T  +   L+   A+    +++ E F+ SVA  ++++E  RS+  + +KE       EAL+
Sbjct: 61  TTRKPVDLNVNAAIDLGTEIVSEAFLLSVAIGLLLYETSRSSEKDKKKE-------EALQ 120

Query: 121 QRDESLSTELELLQQKLVEL 141
            R ++L  +LE+ Q+ +  L
Sbjct: 121 NRFKNLEEKLEVQQETINNL 131

[Close]

BLAST of Carg07756 vs. ExPASy Swiss-Prot
Match: Q9H6K4 (Optic atrophy 3 protein OS=Homo sapiens OX=9606 GN=OPA3 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.2e-08
Identity = 48/135 (35.56%), Postives = 72/135 (53.33%), Query Frame = 0


Query: 4   PVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSI-INFAQINHRMSTQMQRRIYGHATD 63
           P+ KL  L ++ +SKPL NR+K+ A     F+  I +  AQ+ H +  + + RI G    
Sbjct: 7   PMAKLLYLGIRQVSKPLANRIKEAARRSEFFKTYICLPPAQLYHWVEMRTKMRIMGFRGT 66

Query: 64  VEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALRQR 123
           V I+PL+EE A +   +L+GE  +F V G  +V E  R    +  KEE +R    ALR  
Sbjct: 67  V-IKPLNEEAAAELGAELLGEATIFIVGGGCLVLEYWRHQAQQRHKEEEQRAAWNALRDE 126

Query: 124 DESLSTELELLQQKL 138
              L+  LE LQ ++
Sbjct: 127 VGHLALALEALQAQV 140

[Close]

BLAST of Carg07756 vs. ExPASy Swiss-Prot
Match: Q641S2 (Optic atrophy 3 protein homolog OS=Xenopus laevis OX=8355 GN=opa3 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.3e-08
Identity = 51/143 (35.66%), Postives = 75/143 (52.45%), Query Frame = 0


Query: 4   PVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSI-INFAQINHRMSTQMQRRIYGHATD 63
           P+ KL  L ++ +SKPL NR+K  A     FR  + +  AQ+ H +  + + RI G    
Sbjct: 7   PIAKLLYLGIRQISKPLANRIKAGARRSEFFRTYVCLPPAQVYHWVEMRSKMRIMGFRGA 66

Query: 64  VEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALRQR 123
           V I+PL+E+ A +   +L+GE  +F + G  +V E  R + +  RKEE    EMEA   R
Sbjct: 67  V-IKPLNEDAAAELGAELLGEAIIFLIGGGCMVAEYSRQSANSHRKEE----EMEA---R 126

Query: 124 DESLSTELELLQQKLVELEQHAR 146
             S+  E+  L     ELE  AR
Sbjct: 127 LGSMEAEIARLGLLTEELETRAR 141

[Close]

BLAST of Carg07756 vs. ExPASy Swiss-Prot
Match: Q505D7 (Optic atrophy 3 protein homolog OS=Mus musculus OX=10090 GN=Opa3 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.4e-07
Identity = 46/132 (34.85%), Postives = 68/132 (51.52%), Query Frame = 0


Query: 4   PVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSI-INFAQINHRMSTQMQRRIYGHATD 63
           P+ KL  L ++ +SKPL NR+K  A     F+  I +  AQ+ H +  + + RI G    
Sbjct: 7   PMAKLFYLGIRQVSKPLANRIKDAARRSEFFKTYICLPPAQLYHWVEMRTKMRIMGF-RG 66

Query: 64  VEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALRQR 123
             I+PL+EE A +   +L+GE  +F V G  +V E  R    +  KEE +R    AL+  
Sbjct: 67  TTIKPLNEEAAAELGAELLGEATIFIVGGGCLVLEYWRHQTQQRNKEEEQRAAWNALQDE 126

Query: 124 DESLSTELELLQ 135
              L+  LE LQ
Sbjct: 127 VGRLALALEALQ 137

[Close]

BLAST of Carg07756 vs. ExPASy TrEMBL
Match: A0A6J1EEW1 (OPA3-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433530 PE=3 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 3.8e-80
Identity = 166/170 (97.65%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIIN AQINHRMSTQMQRRIYGHA
Sbjct: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINLAQINHRMSTQMQRRIYGHA 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIV+FEVQRSARSEARK+EVRRQEMEALR
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKDEVRRQEMEALR 120

Query: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAKPPA 171
           QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESG+LAKPPA
Sbjct: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGNLAKPPA 170

[Close]

BLAST of Carg07756 vs. ExPASy TrEMBL
Match: A0A6J1KSX9 (OPA3-like protein OS=Cucurbita maxima OX=3661 GN=LOC111497311 PE=3 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.2e-79
Identity = 165/168 (98.21%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIIN AQINHRMSTQMQRRIYGHA
Sbjct: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINVAQINHRMSTQMQRRIYGHA 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIV+FEVQRSARSEARKEEVRRQEMEALR
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEEVRRQEMEALR 120

Query: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAKP 169
           QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESG+LAKP
Sbjct: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGNLAKP 168

[Close]

BLAST of Carg07756 vs. ExPASy TrEMBL
Match: A0A6J1IU89 (OPA3-like protein OS=Cucurbita maxima OX=3661 GN=LOC111478633 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.3e-69
Identity = 147/168 (87.50%), Postives = 155/168 (92.26%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLP+LKLGTL LKTLSKPLGNRLKKQAALHPRFRQ IIN AQ NHRMSTQMQRRIY HA
Sbjct: 1   MVLPLLKLGTLALKTLSKPLGNRLKKQAALHPRFRQFIINVAQSNHRMSTQMQRRIYSHA 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TDVEIRPLDEEKAVQAAVDLIGE+FVFSVAG IV+FEVQRSARSEARKE+VRRQEMEALR
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGELFVFSVAGVIVIFEVQRSARSEARKEDVRRQEMEALR 120

Query: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAKP 169
           QRDESL  E+ELL+ KLVELE+HARGRGL GILNFKH  SESG+ AKP
Sbjct: 121 QRDESLLVEMELLKHKLVELEEHARGRGLGGILNFKHAHSESGNSAKP 168

[Close]

BLAST of Carg07756 vs. ExPASy TrEMBL
Match: A0A6J1CMZ8 (OPA3-like protein OS=Momordica charantia OX=3673 GN=LOC111012461 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.9e-69
Identity = 147/168 (87.50%), Postives = 154/168 (91.67%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLP+LKLGTL LKTLSKPLGNRLK QAA HPRFRQ IIN AQ NHRM+TQMQRRIY HA
Sbjct: 1   MVLPLLKLGTLALKTLSKPLGNRLKTQAARHPRFRQLIINMAQFNHRMTTQMQRRIYSHA 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEE+RRQEMEALR
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEIRRQEMEALR 120

Query: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAKP 169
           Q+DESL TE+ELL+ KLVELEQHARGRGL GILNFKH   ESG+ AKP
Sbjct: 121 QKDESLLTEVELLKHKLVELEQHARGRGLGGILNFKHAQMESGNSAKP 168

[Close]

BLAST of Carg07756 vs. ExPASy TrEMBL
Match: A0A6J1EIB0 (OPA3-like protein OS=Cucurbita moschata OX=3662 GN=LOC111432953 PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 5.1e-69
Identity = 147/168 (87.50%), Postives = 154/168 (91.67%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLP+LKLGTL LKTLSKPLGNRLKKQAALHPRFRQ IIN AQ NHRMSTQMQR IY HA
Sbjct: 1   MVLPLLKLGTLALKTLSKPLGNRLKKQAALHPRFRQFIINVAQSNHRMSTQMQRHIYSHA 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TDVEIRPLDEEKAVQAAVDLIGE+FVFSVAGAIV+FEVQRSARSEARKEEVRR EMEALR
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGELFVFSVAGAIVIFEVQRSARSEARKEEVRRHEMEALR 120

Query: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAKP 169
           QRDESL  E+ELL+ KLVELE+HARGRGL GILNFKH  SESG+ AKP
Sbjct: 121 QRDESLLAEMELLKHKLVELEEHARGRGLGGILNFKHAHSESGNSAKP 168

[Close]

BLAST of Carg07756 vs. TAIR 10
Match: AT1G28510.1 (Optic atrophy 3 protein (OPA3) )

HSP 1 Score: 214.9 bits (546), Expect = 4.9e-56
Identity = 115/164 (70.12%), Postives = 137/164 (83.54%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLP++KLGTL +KT+SKPL ++LK QA +HP+FRQSIINFAQ NHR++TQMQRRIYGHA
Sbjct: 1   MVLPLMKLGTLAVKTISKPLASQLKHQAKVHPKFRQSIINFAQRNHRITTQMQRRIYGHA 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TDVEIRPLDEEKAVQAAVDLIGE+F+F V GA+VVFEVQRS+RSEARKEE R+QE+E LR
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGEIFLFGVGGAVVVFEVQRSSRSEARKEEARKQELEELR 120

Query: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGS 165
            +DE L  ++  L+ KL ELEQ A+ RGLSGI   K  P  + S
Sbjct: 121 IKDEELEKQVADLKSKLEELEQLAKARGLSGIFQLKPQPGTTAS 164

[Close]

BLAST of Carg07756 vs. TAIR 10
Match: AT3G58150.1 (Optic atrophy 3 protein (OPA3) )

HSP 1 Score: 153.7 bits (387), Expect = 1.3e-37
Identity = 80/142 (56.34%), Postives = 111/142 (78.17%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLP+LKLGTL L+T+ KP+ N+LKK+A ++P+FRQ IIN AQ NHR +T++QRR  G  
Sbjct: 12  MVLPLLKLGTLALRTICKPIANQLKKEAGVNPKFRQFIINIAQANHRFTTKLQRRASGRI 71

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TD  IRPL+EE+AVQAA DL+GE+F F+VAGA +V+EVQR+AR EA+KEE R+QE+   R
Sbjct: 72  TDAVIRPLNEERAVQAAADLLGELFAFTVAGAALVYEVQRNARGEAKKEEKRQQELAEFR 131

Query: 121 QRDESLSTELELLQQKLVELEQ 143
           ++ E +  E+E ++Q+   L +
Sbjct: 132 RKHEKMENEIEEMKQRCCLLHE 153

The following BLAST results are available for this feature:

BLAST of Carg07756 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026548.1	2.4e-81	100.00	hypothetical protein SDJN02_10550 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023517385.1	7.1e-81	98.82	OPA3-like protein [Cucurbita pepo subsp. pepo]	[more]
XP_022926359.1	7.8e-80	97.65	OPA3-like protein [Cucurbita moschata]	[more]
XP_023003845.1	8.6e-79	98.21	OPA3-like protein [Cucurbita maxima]	[more]
KAG6594576.1	2.5e-70	98.04	hypothetical protein SDJN03_11129, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Carg07756 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9P7W0	1.5e-12	34.75	OPA3-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=2848...	[more]
Q54NW1	2.6e-09	29.29	OPA3-like protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0284959 PE=3 SV=1	[more]
Q9H6K4	2.2e-08	35.56	Optic atrophy 3 protein OS=Homo sapiens OX=9606 GN=OPA3 PE=1 SV=1	[more]
Q641S2	6.3e-08	35.66	Optic atrophy 3 protein homolog OS=Xenopus laevis OX=8355 GN=opa3 PE=2 SV=1	[more]
Q505D7	2.4e-07	34.85	Optic atrophy 3 protein homolog OS=Mus musculus OX=10090 GN=Opa3 PE=1 SV=1	[more]

BLAST of Carg07756 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EEW1	3.8e-80	97.65	OPA3-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433530 PE=3 SV=1	[more]
A0A6J1KSX9	4.2e-79	98.21	OPA3-like protein OS=Cucurbita maxima OX=3661 GN=LOC111497311 PE=3 SV=1	[more]
A0A6J1IU89	2.3e-69	87.50	OPA3-like protein OS=Cucurbita maxima OX=3661 GN=LOC111478633 PE=3 SV=1	[more]
A0A6J1CMZ8	3.9e-69	87.50	OPA3-like protein OS=Momordica charantia OX=3673 GN=LOC111012461 PE=3 SV=1	[more]
A0A6J1EIB0	5.1e-69	87.50	OPA3-like protein OS=Cucurbita moschata OX=3662 GN=LOC111432953 PE=3 SV=1	[more]

BLAST of Carg07756 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28510.1	4.9e-56	70.12	Optic atrophy 3 protein (OPA3)	[more]
AT3G58150.1	1.3e-37	56.34	Optic atrophy 3 protein (OPA3)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 116..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..170
None	No IPR available	PANTHER	PTHR12499:SF10	OPTIC ATROPHY 3 PROTEIN	coord: 1..167
IPR010754	Optic atrophy 3-like	PFAM	PF07047	OPA3	coord: 3..126 e-value: 1.2E-42 score: 144.6
IPR010754	Optic atrophy 3-like	PANTHER	PTHR12499	OPTIC ATROPHY 3 PROTEIN OPA3	coord: 1..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07756-RA	Carg07756-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019216	regulation of lipid metabolic process
cellular_component	GO:0005739	mitochondrion