Carg07647 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07647
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Polyadenylate-binding protein 1-B-binding protein
Location	Carg_Chr13: 8293730 .. 8295059 (-)
RNA-Seq Expression	Carg07647
Synteny	Carg07647

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGACATCACAATCCACCCCCCTTCGGGGTCCAACGTCCTTACTGGCACACCGCCTCGTGTCTACCCCCCTTCGGGGAACAGCGAGAAAGTTGGCACATCGTCTGGTTTCTGGCTCTGATACCATTTGTAACGATCCATATCCATCACTAGCAGATATTGTCCTCTTTGGACTTTCCCTTTCGGGCTTCCCCTCAGCGCTTTAAAACGCGTTTGCCAGGGGAAGGTTTCCACATCCGTGATTTGTTCTCCTCCCAACCAATGTGGGACATCACAGTACATTATGACTAATGCTTCATTTTCTCTAATTATTATGGGATCTCACAGTCTACTTCCTTGGACGTTCAAAATCCTCTTTTTTTTCTCTAAATGATTTGTCACTGCGGATCTGATCTTGTCCTTGTTAGTAGAGAGAGCGAATTGGTTTATGTTTCGTTGATAAATTTTATTTGAAATTTCTTCTCATAACTCTTACCTTCATCTTCCCCCTTTCTTTCGCCATTTTAGCCCACTCCCTCTTCACCCACCCACTTCTCGTCCAGCTCCAAAACCCTTTCGCCGACCCCGCTCAGACCCGCCATCGATGGACCGAGCTCCTTACCTTCCAATTCTGCTACCTTATTTTCCTCTTCGCTTTTTCTCTTCTCTCCACCGCCGCCGTCGTCTTCACCGTCGCTTCCCTCTATACTTCCAAGCCCGTTTCCTATTCCTCAACTATCTCCGCCATTCCCAAGGTTTTTAAGCGCCTTTTCGTCACTTTCCTCTGGGTTTCTCTCCTCATGATTATCTATAACTTCATCTTTTTCGTCTTCTTGATACTCCTTATCCTTGCAATTGACACCCAGAATTACATTTTGTTCTTCTTCTCCGTTGTTGTAATCTTCATCCTGTTTCTAGTTGTACATGTTTACATCACCGCCTTATGGCATTTGGCTAGCGTCGTGTCGGTGCTTGAACCGATTTATGGATTTGCCGCCATGAAAAAGAGCTACGAATTGCTTATGGGCAAAACCCGTTTTGCGGCGGTGCTTGTATTTGCGTATTTGGCCATCTGCGCTACAATTAATGTCATATTTGGGGCTGTGGTCGTTCACGGCGATGATGGACATGGGGTTTTTATGAGGATTATCGTTGGTGGCTTTCTGGTTGGCGTTTTGGTGATTGTGAACTTGGTGGGATTGTTGGTTCAGAGTGTGTTTTACTATGTCTGCAAGAGCTTTCACCATCAGGGAATTGATAAGCTCGCCTTACATGACCATTTGGGTGGATATCTTGGTGAGTATGTACCTCTCAAAAGTAGCATTCAAATGGAAAATTTAGATGCATGA

mRNA sequence

ATGTGGGACATCACAATCCACCCCCCTTCGGGGTCCAACGTCCTTACTGGCACACCGCCTCGTGTCTACCCCCCTTCGGGGAACAGCGAGAAAGTTGGCACATCGTCTGCCCACTCCCTCTTCACCCACCCACTTCTCGTCCAGCTCCAAAACCCTTTCGCCGACCCCGCTCAGACCCGCCATCGATGGACCGAGCTCCTTACCTTCCAATTCTGCTACCTTATTTTCCTCTTCGCTTTTTCTCTTCTCTCCACCGCCGCCGTCGTCTTCACCGTCGCTTCCCTCTATACTTCCAAGCCCGTTTCCTATTCCTCAACTATCTCCGCCATTCCCAAGGTTTTTAAGCGCCTTTTCGTCACTTTCCTCTGGGTTTCTCTCCTCATGATTATCTATAACTTCATCTTTTTCGTCTTCTTGATACTCCTTATCCTTGCAATTGACACCCAGAATTACATTTTGTTCTTCTTCTCCGTTGTTGTAATCTTCATCCTGTTTCTAGTTGTACATGTTTACATCACCGCCTTATGGCATTTGGCTAGCGTCGTGTCGGTGCTTGAACCGATTTATGGATTTGCCGCCATGAAAAAGAGCTACGAATTGCTTATGGGCAAAACCCGTTTTGCGGCGGTGCTTGTATTTGCGTATTTGGCCATCTGCGCTACAATTAATGTCATATTTGGGGCTGTGGTCGTTCACGGCGATGATGGACATGGGGTTTTTATGAGGATTATCGTTGGTGGCTTTCTGGTTGGCGTTTTGGTGATTGTGAACTTGGTGGGATTGTTGGTTCAGAGTGTGTTTTACTATGTCTGCAAGAGCTTTCACCATCAGGGAATTGATAAGCTCGCCTTACATGACCATTTGGGTGGATATCTTGGTGAGTATGTACCTCTCAAAAGTAGCATTCAAATGGAAAATTTAGATGCATGA

Coding sequence (CDS)

ATGTGGGACATCACAATCCACCCCCCTTCGGGGTCCAACGTCCTTACTGGCACACCGCCTCGTGTCTACCCCCCTTCGGGGAACAGCGAGAAAGTTGGCACATCGTCTGCCCACTCCCTCTTCACCCACCCACTTCTCGTCCAGCTCCAAAACCCTTTCGCCGACCCCGCTCAGACCCGCCATCGATGGACCGAGCTCCTTACCTTCCAATTCTGCTACCTTATTTTCCTCTTCGCTTTTTCTCTTCTCTCCACCGCCGCCGTCGTCTTCACCGTCGCTTCCCTCTATACTTCCAAGCCCGTTTCCTATTCCTCAACTATCTCCGCCATTCCCAAGGTTTTTAAGCGCCTTTTCGTCACTTTCCTCTGGGTTTCTCTCCTCATGATTATCTATAACTTCATCTTTTTCGTCTTCTTGATACTCCTTATCCTTGCAATTGACACCCAGAATTACATTTTGTTCTTCTTCTCCGTTGTTGTAATCTTCATCCTGTTTCTAGTTGTACATGTTTACATCACCGCCTTATGGCATTTGGCTAGCGTCGTGTCGGTGCTTGAACCGATTTATGGATTTGCCGCCATGAAAAAGAGCTACGAATTGCTTATGGGCAAAACCCGTTTTGCGGCGGTGCTTGTATTTGCGTATTTGGCCATCTGCGCTACAATTAATGTCATATTTGGGGCTGTGGTCGTTCACGGCGATGATGGACATGGGGTTTTTATGAGGATTATCGTTGGTGGCTTTCTGGTTGGCGTTTTGGTGATTGTGAACTTGGTGGGATTGTTGGTTCAGAGTGTGTTTTACTATGTCTGCAAGAGCTTTCACCATCAGGGAATTGATAAGCTCGCCTTACATGACCATTTGGGTGGATATCTTGGTGAGTATGTACCTCTCAAAAGTAGCATTCAAATGGAAAATTTAGATGCATGA

Protein sequence

MWDITIHPPSGSNVLTGTPPRVYPPSGNSEKVGTSSAHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLYTSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFFFSVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYLAICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHHQGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA

Homology

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BLAST of Carg07647 vs. NCBI nr
Match: KAG7019787.1 (hypothetical protein SDJN02_18750, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 574.7 bits (1480), Expect = 4.8e-160
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0


Query: 1   MWDITIHPPSGSNVLTGTPPRVYPPSGNSEKVGTSSAHSLFTHPLLVQLQNPFADPAQTR 60
           MWDITIHPPSGSNVLTGTPPRVYPPSGNSEKVGTSSAHSLFTHPLLVQLQNPFADPAQTR
Sbjct: 1   MWDITIHPPSGSNVLTGTPPRVYPPSGNSEKVGTSSAHSLFTHPLLVQLQNPFADPAQTR 60

Query: 61  HRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLYTSKPVSYSSTISAIPKVFKRLFVT 120
           HRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLYTSKPVSYSSTISAIPKVFKRLFVT
Sbjct: 61  HRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLYTSKPVSYSSTISAIPKVFKRLFVT 120

Query: 121 FLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFFFSVVVIFILFLVVHVYITALWHLAS 180
           FLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFFFSVVVIFILFLVVHVYITALWHLAS
Sbjct: 121 FLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFFFSVVVIFILFLVVHVYITALWHLAS 180

Query: 181 VVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYLAICATINVIFGAVVVHGDDGHGVF 240
           VVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYLAICATINVIFGAVVVHGDDGHGVF
Sbjct: 181 VVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYLAICATINVIFGAVVVHGDDGHGVF 240

Query: 241 MRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHHQGIDKLALHDHLGGYLGEYVPLKS 300
           MRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHHQGIDKLALHDHLGGYLGEYVPLKS
Sbjct: 241 MRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHHQGIDKLALHDHLGGYLGEYVPLKS 300

Query: 301 SIQMENLDA 310
           SIQMENLDA
Sbjct: 301 SIQMENLDA 309

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BLAST of Carg07647 vs. NCBI nr
Match: XP_022923764.1 (uncharacterized protein LOC111431372 [Cucurbita moschata] >XP_023519021.1 uncharacterized protein LOC111782492 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 499.6 bits (1285), Expect = 2.0e-137
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 96
           AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY
Sbjct: 48  AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 107

Query: 97  TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFFF 156
           TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFFF
Sbjct: 108 TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFFF 167

Query: 157 SVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 216
           SVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL
Sbjct: 168 SVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 227

Query: 217 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 276
           AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH
Sbjct: 228 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 287

Query: 277 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA 310
           QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA
Sbjct: 288 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA 320

[Close]

BLAST of Carg07647 vs. NCBI nr
Match: XP_023001178.1 (uncharacterized protein LOC111495391 [Cucurbita maxima])

HSP 1 Score: 491.5 bits (1264), Expect = 5.3e-135
Identity = 269/273 (98.53%), Postives = 270/273 (98.90%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 96
           AHSLFTHPLLVQLQNPF+DP QTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY
Sbjct: 48  AHSLFTHPLLVQLQNPFSDPVQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 107

Query: 97  TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFFF 156
           TSK VSYSSTI AIPKVFKRLFVTFLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFFF
Sbjct: 108 TSKSVSYSSTIFAIPKVFKRLFVTFLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFFF 167

Query: 157 SVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 216
           SVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL
Sbjct: 168 SVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 227

Query: 217 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 276
           AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH
Sbjct: 228 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 287

Query: 277 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA 310
           QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA
Sbjct: 288 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA 320

[Close]

BLAST of Carg07647 vs. NCBI nr
Match: XP_038876995.1 (uncharacterized protein LOC120069331 [Benincasa hispida])

HSP 1 Score: 469.5 bits (1207), Expect = 2.2e-128
Identity = 253/273 (92.67%), Postives = 265/273 (97.07%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 96
           AHSLFTHPLLVQLQNPFADP QTRHRWT+LL+FQFCYLIFLFAFSLLSTAAVVFTVASLY
Sbjct: 48  AHSLFTHPLLVQLQNPFADPIQTRHRWTKLLSFQFCYLIFLFAFSLLSTAAVVFTVASLY 107

Query: 97  TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFFF 156
           TSKPVSYSST+SAIPKVFKRLFVTFLWVSLLMIIYNFIF  FL+LLILAI TQNY LFFF
Sbjct: 108 TSKPVSYSSTLSAIPKVFKRLFVTFLWVSLLMIIYNFIFLAFLVLLILAIHTQNYFLFFF 167

Query: 157 SVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 216
           S++VIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELL GKTRFA VLVFAYL
Sbjct: 168 SIIVIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELLKGKTRFAGVLVFAYL 227

Query: 217 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 276
           AICATI+VIFGAVVVHG DG+GVF+RI+VGGFLVGVLVIVNLVGLLVQS+FYYVCKSFHH
Sbjct: 228 AICATISVIFGAVVVHGGDGYGVFVRIVVGGFLVGVLVIVNLVGLLVQSLFYYVCKSFHH 287

Query: 277 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA 310
           QGIDKLALHDHLGGYLGEYVPLKSSIQM+NLDA
Sbjct: 288 QGIDKLALHDHLGGYLGEYVPLKSSIQMDNLDA 320

[Close]

BLAST of Carg07647 vs. NCBI nr
Match: XP_004145125.1 (uncharacterized protein LOC101206734 [Cucumis sativus] >KAE8652645.1 hypothetical protein Csa_013056 [Cucumis sativus])

HSP 1 Score: 469.2 bits (1206), Expect = 2.8e-128
Identity = 252/273 (92.31%), Postives = 266/273 (97.44%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 96
           AHSLFTHPLLVQLQNPFADP QTRHRWT+LL+FQFCYLIFLFAFSLLSTAAVVFTVASLY
Sbjct: 48  AHSLFTHPLLVQLQNPFADPIQTRHRWTKLLSFQFCYLIFLFAFSLLSTAAVVFTVASLY 107

Query: 97  TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFFF 156
           TSKPVSYSST+SAIPKVFKRLFVTFLWVSLLMIIYNFIF  FL+LL+LAIDTQNY LFFF
Sbjct: 108 TSKPVSYSSTLSAIPKVFKRLFVTFLWVSLLMIIYNFIFLAFLVLLVLAIDTQNYFLFFF 167

Query: 157 SVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 216
           SV+VIFILFLVVHVYITALWHLASVVSVLEPIYGF+AM+KSYELL GKTRFA VLVFAYL
Sbjct: 168 SVIVIFILFLVVHVYITALWHLASVVSVLEPIYGFSAMRKSYELLKGKTRFAGVLVFAYL 227

Query: 217 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 276
           AICATI+VIFGAVVVHG DG+GVF+RI+VGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH
Sbjct: 228 AICATISVIFGAVVVHGGDGYGVFVRIVVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 287

Query: 277 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA 310
           QGIDKLALHDHLGGYLGEYVPLKSSIQM++LDA
Sbjct: 288 QGIDKLALHDHLGGYLGEYVPLKSSIQMDSLDA 320

[Close]

BLAST of Carg07647 vs. ExPASy TrEMBL
Match: A0A6J1E7B2 (uncharacterized protein LOC111431372 OS=Cucurbita moschata OX=3662 GN=LOC111431372 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 9.4e-138
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 96
           AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY
Sbjct: 48  AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 107

Query: 97  TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFFF 156
           TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFFF
Sbjct: 108 TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFFF 167

Query: 157 SVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 216
           SVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL
Sbjct: 168 SVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 227

Query: 217 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 276
           AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH
Sbjct: 228 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 287

Query: 277 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA 310
           QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA
Sbjct: 288 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA 320

[Close]

BLAST of Carg07647 vs. ExPASy TrEMBL
Match: A0A6J1KPR7 (uncharacterized protein LOC111495391 OS=Cucurbita maxima OX=3661 GN=LOC111495391 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.6e-135
Identity = 269/273 (98.53%), Postives = 270/273 (98.90%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 96
           AHSLFTHPLLVQLQNPF+DP QTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY
Sbjct: 48  AHSLFTHPLLVQLQNPFSDPVQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 107

Query: 97  TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFFF 156
           TSK VSYSSTI AIPKVFKRLFVTFLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFFF
Sbjct: 108 TSKSVSYSSTIFAIPKVFKRLFVTFLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFFF 167

Query: 157 SVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 216
           SVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL
Sbjct: 168 SVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 227

Query: 217 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 276
           AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH
Sbjct: 228 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 287

Query: 277 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA 310
           QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA
Sbjct: 288 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA 320

[Close]

BLAST of Carg07647 vs. ExPASy TrEMBL
Match: A0A0A0LWW5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058060 PE=4 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 1.4e-128
Identity = 252/273 (92.31%), Postives = 266/273 (97.44%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 96
           AHSLFTHPLLVQLQNPFADP QTRHRWT+LL+FQFCYLIFLFAFSLLSTAAVVFTVASLY
Sbjct: 87  AHSLFTHPLLVQLQNPFADPIQTRHRWTKLLSFQFCYLIFLFAFSLLSTAAVVFTVASLY 146

Query: 97  TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFFF 156
           TSKPVSYSST+SAIPKVFKRLFVTFLWVSLLMIIYNFIF  FL+LL+LAIDTQNY LFFF
Sbjct: 147 TSKPVSYSSTLSAIPKVFKRLFVTFLWVSLLMIIYNFIFLAFLVLLVLAIDTQNYFLFFF 206

Query: 157 SVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 216
           SV+VIFILFLVVHVYITALWHLASVVSVLEPIYGF+AM+KSYELL GKTRFA VLVFAYL
Sbjct: 207 SVIVIFILFLVVHVYITALWHLASVVSVLEPIYGFSAMRKSYELLKGKTRFAGVLVFAYL 266

Query: 217 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 276
           AICATI+VIFGAVVVHG DG+GVF+RI+VGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH
Sbjct: 267 AICATISVIFGAVVVHGGDGYGVFVRIVVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 326

Query: 277 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA 310
           QGIDKLALHDHLGGYLGEYVPLKSSIQM++LDA
Sbjct: 327 QGIDKLALHDHLGGYLGEYVPLKSSIQMDSLDA 359

[Close]

BLAST of Carg07647 vs. ExPASy TrEMBL
Match: A0A5D3BKR2 (Polyadenylate-binding protein 1-B-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005240 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 3.0e-128
Identity = 253/273 (92.67%), Postives = 265/273 (97.07%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 96
           AHSLFTHPLLVQLQNPFADP QTRHRWT+LLTFQFCYLIFLFAFSLLSTAAVVFTVASLY
Sbjct: 48  AHSLFTHPLLVQLQNPFADPIQTRHRWTKLLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 107

Query: 97  TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFFF 156
           TSKPVSYSST+SAIPKVFKRLFVTFLWVSLLMIIYNFIF  FL+LL+LAIDTQNY LFFF
Sbjct: 108 TSKPVSYSSTLSAIPKVFKRLFVTFLWVSLLMIIYNFIFLAFLVLLVLAIDTQNYFLFFF 167

Query: 157 SVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 216
           SVVVIFILFLVVHVYITALWHLASVVSVLEPIYGF+AMKKSYELL GKTRFA VLVFAYL
Sbjct: 168 SVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFSAMKKSYELLKGKTRFAGVLVFAYL 227

Query: 217 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 276
           AICATI+VIFGAVVVHG +G+GV +RI+VGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH
Sbjct: 228 AICATISVIFGAVVVHGGNGYGVIVRIVVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 287

Query: 277 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA 310
           QGIDKLALHDHLGGYLGEYVPLKSSIQM++LDA
Sbjct: 288 QGIDKLALHDHLGGYLGEYVPLKSSIQMDSLDA 320

[Close]

BLAST of Carg07647 vs. ExPASy TrEMBL
Match: A0A1S3B2A2 (uncharacterized protein LOC103484985 OS=Cucumis melo OX=3656 GN=LOC103484985 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 3.0e-128
Identity = 253/273 (92.67%), Postives = 265/273 (97.07%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 96
           AHSLFTHPLLVQLQNPFADP QTRHRWT+LLTFQFCYLIFLFAFSLLSTAAVVFTVASLY
Sbjct: 48  AHSLFTHPLLVQLQNPFADPIQTRHRWTKLLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 107

Query: 97  TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFFF 156
           TSKPVSYSST+SAIPKVFKRLFVTFLWVSLLMIIYNFIF  FL+LL+LAIDTQNY LFFF
Sbjct: 108 TSKPVSYSSTLSAIPKVFKRLFVTFLWVSLLMIIYNFIFLAFLVLLVLAIDTQNYFLFFF 167

Query: 157 SVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 216
           SVVVIFILFLVVHVYITALWHLASVVSVLEPIYGF+AMKKSYELL GKTRFA VLVFAYL
Sbjct: 168 SVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFSAMKKSYELLKGKTRFAGVLVFAYL 227

Query: 217 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 276
           AICATI+VIFGAVVVHG +G+GV +RI+VGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH
Sbjct: 228 AICATISVIFGAVVVHGGNGYGVIVRIVVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 287

Query: 277 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA 310
           QGIDKLALHDHLGGYLGEYVPLKSSIQM++LDA
Sbjct: 288 QGIDKLALHDHLGGYLGEYVPLKSSIQMDSLDA 320

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BLAST of Carg07647 vs. TAIR 10
Match: AT4G19950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44860.1); Has 338 Blast hits to 330 proteins in 72 species: Archae - 2; Bacteria - 94; Metazoa - 7; Fungi - 0; Plants - 232; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 370.9 bits (951), Expect = 9.7e-103
Identity = 204/273 (74.73%), Postives = 230/273 (84.25%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQN-PFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASL 96
           AHSLFT P+L Q+   P AD +Q +H WT LL FQFCY+IFLFAFSLLSTAAVVFTVASL
Sbjct: 48  AHSLFTQPILAQIDTYPQADQSQLQHEWTVLLVFQFCYIIFLFAFSLLSTAAVVFTVASL 107

Query: 97  YTSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFF 156
           YT KPVS+SST+SAIP V KRLF+TFLWVSLLM+ YN +F +FL+ LI+A+D QN +L  
Sbjct: 108 YTGKPVSFSSTMSAIPLVLKRLFITFLWVSLLMLAYNTVFLIFLVTLIVAVDLQNVVLAV 167

Query: 157 FSVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAY 216
           FS+VVIF+LFLVVHVY+TALWHLASVVSVLEPIYG AAMKKSYELL GKT  A  +VF Y
Sbjct: 168 FSLVVIFVLFLVVHVYMTALWHLASVVSVLEPIYGLAAMKKSYELLKGKTLMACSMVFIY 227

Query: 217 LAICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFH 276
           L  C  I  +FGAVVV G D +G+F RI+ GGFLVGVLVIVNL+GLLVQSVFYYVCKSFH
Sbjct: 228 LVHCGFIAGVFGAVVVRGGDDYGIFARIVAGGFLVGVLVIVNLIGLLVQSVFYYVCKSFH 287

Query: 277 HQGIDKLALHDHLGGYLGEYVPLKSSIQMENLD 309
           HQ IDK ALHDHLGGYLGEYVPLKS+IQMEN +
Sbjct: 288 HQEIDKSALHDHLGGYLGEYVPLKSNIQMENFE 320

[Close]

BLAST of Carg07647 vs. TAIR 10
Match: AT5G44860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 233 Blast hits to 227 proteins in 25 species: Archae - 0; Bacteria - 13; Metazoa - 1; Fungi - 0; Plants - 216; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 361.7 bits (927), Expect = 5.9e-100
Identity = 200/273 (73.26%), Postives = 230/273 (84.25%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQ-NPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASL 96
           AHSLFT P+L QL   P +D ++T H WT LL +QF Y+IFLFAFSLLSTAAVVFTVASL
Sbjct: 48  AHSLFTQPILAQLDATPPSDQSKTNHEWTLLLIYQFIYVIFLFAFSLLSTAAVVFTVASL 107

Query: 97  YTSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFF 156
           YT KPVS+SST+SAIP V KRLF+TFLWVSL+M++YN +F +FL++LI+AID Q+ IL  
Sbjct: 108 YTGKPVSFSSTMSAIPLVLKRLFITFLWVSLMMLVYNSVFLLFLVVLIVAIDLQSVILAV 167

Query: 157 FSVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAY 216
           FS+VVIF+LFL VHVY+TA WHLASVVSVLEPIYG AAMKKSYELL G+T  A  +VF Y
Sbjct: 168 FSMVVIFVLFLGVHVYMTAWWHLASVVSVLEPIYGIAAMKKSYELLNGRTNMACSMVFMY 227

Query: 217 LAICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFH 276
           LA+C     +FG VVVHG D  G+F +I+VGGFLVG+LVIVNLVGLLVQSVFYYVCKSFH
Sbjct: 228 LALCGITAGVFGGVVVHGGDDFGLFTKIVVGGFLVGILVIVNLVGLLVQSVFYYVCKSFH 287

Query: 277 HQGIDKLALHDHLGGYLGEYVPLKSSIQMENLD 309
           HQ IDK ALHDHLGGYLG+YVPLKSSIQMEN D
Sbjct: 288 HQPIDKSALHDHLGGYLGDYVPLKSSIQMENFD 320

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BLAST of Carg07647 vs. TAIR 10
Match: AT1G31130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 246 Blast hits to 244 proteins in 29 species: Archae - 2; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 222; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 335.5 bits (859), Expect = 4.5e-92
Identity = 187/275 (68.00%), Postives = 224/275 (81.45%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQNPFADPA---QTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVA 96
           AHSLFT P+L +L    +DP    ++RH WT LL FQF YLIFLFAFSLLSTAAVVFTVA
Sbjct: 48  AHSLFTQPILAKLDK--SDPPNSDRSRHDWTVLLIFQFSYLIFLFAFSLLSTAAVVFTVA 107

Query: 97  SLYTSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNFIFFVFLILLILAIDTQNYIL 156
           SLYT KPVS+SST+SAIPKVFKRLF+TFLWV+LLM  YN +FFVFL++L++A+D  +  L
Sbjct: 108 SLYTGKPVSFSSTLSAIPKVFKRLFITFLWVALLMFAYNAVFFVFLVMLLVALDLNSLGL 167

Query: 157 FFFSVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVF 216
              + V+I +L+  VHVY TALWHL SV+SVLEP+YG AAM+K+YELL GKT+ A  L+F
Sbjct: 168 AIVAGVIISVLYFGVHVYFTALWHLGSVISVLEPVYGIAAMRKAYELLKGKTKMAMGLIF 227

Query: 217 AYLAICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKS 276
            YL +C  I V+FGAVVVHG   +G F R +VGG LVGVLV+VNLVGLLVQSVFYYVCKS
Sbjct: 228 VYLFLCGLIGVVFGAVVVHGGGKYGTFTRTLVGGLLVGVLVMVNLVGLLVQSVFYYVCKS 287

Query: 277 FHHQGIDKLALHDHLGGYLGEYVPLKSSIQMENLD 309
           +HHQ IDK AL+D LGGYLG+YVPLKS+IQ+E+LD
Sbjct: 288 YHHQTIDKTALYDQLGGYLGDYVPLKSNIQLEDLD 320

[Close]

BLAST of Carg07647 vs. TAIR 10
Match: AT1G69430.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26650.1); Has 216 Blast hits to 215 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 216; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 1.4e-05
Identity = 56/217 (25.81%), Postives = 113/217 (52.07%), Query Frame = 0


Query: 72  CYLIFLFAFSLLSTAAVVFTVASLYTSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIY 131
           C+ +F+   SLLS AAVV++V   Y+ K V  +  +  + +++KRL +T+LW+  ++++ 
Sbjct: 126 CFPLFI-TLSLLSRAAVVYSVDCTYSRKKVVVTKFVVIMQRLWKRLVITYLWICTVIVVC 185

Query: 132 NFIFFVFLILLILAIDTQNYILFF------FSVVVIFILFLVVHVYITALWHLASVVSVL 191
              F VFL+    A+ +  Y+L F      +  +++ ++F VV      + +   V+S+L
Sbjct: 186 LTSFCVFLV----AVCSSFYVLGFSPDFNAYGAILVGLVFSVVFANAIIICNTTIVISIL 245

Query: 192 EPIYGFAAMKKSYELLMGKTRFAAVLVFAYLAICATINVIFGAVVVHGDDGHGVFMRIIV 251
           E + G  A+ ++ +L+ G+T+   ++          +  +F   V     G G   R+  
Sbjct: 246 EDVSGPGALVRASDLIKGQTQVGLLIFLGSTIGLTFVEGLFEHRVKSLSYGDG-SSRLWE 305

Query: 252 GGFLVGVLVIVNLVGLLVQSVFYYVCKSFHHQGIDKL 283
           G  LV +   V L+  ++ +VFY+ C+S+  + ++ L
Sbjct: 306 GPLLVVMYSFVVLIDTMMSAVFYFSCRSYSMEAVEAL 336

The following BLAST results are available for this feature:

BLAST of Carg07647 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7019787.1	4.8e-160	100.00	hypothetical protein SDJN02_18750, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022923764.1	2.0e-137	100.00	uncharacterized protein LOC111431372 [Cucurbita moschata] >XP_023519021.1 unchar...	[more]
XP_023001178.1	5.3e-135	98.53	uncharacterized protein LOC111495391 [Cucurbita maxima]	[more]
XP_038876995.1	2.2e-128	92.67	uncharacterized protein LOC120069331 [Benincasa hispida]	[more]
XP_004145125.1	2.8e-128	92.31	uncharacterized protein LOC101206734 [Cucumis sativus] >KAE8652645.1 hypothetica...	[more]

BLAST of Carg07647 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg07647 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E7B2	9.4e-138	100.00	uncharacterized protein LOC111431372 OS=Cucurbita moschata OX=3662 GN=LOC1114313...	[more]
A0A6J1KPR7	2.6e-135	98.53	uncharacterized protein LOC111495391 OS=Cucurbita maxima OX=3661 GN=LOC111495391...	[more]
A0A0A0LWW5	1.4e-128	92.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058060 PE=4 SV=1	[more]
A0A5D3BKR2	3.0e-128	92.67	Polyadenylate-binding protein 1-B-binding protein OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3B2A2	3.0e-128	92.67	uncharacterized protein LOC103484985 OS=Cucumis melo OX=3656 GN=LOC103484985 PE=...	[more]

BLAST of Carg07647 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19950.1	9.7e-103	74.73	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G44860.1	5.9e-100	73.26	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G31130.1	4.5e-92	68.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G69430.1	1.4e-05	25.81	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR33133:SF41	GB\|AAC79135.1	coord: 37..307
None	No IPR available	PANTHER	PTHR33133	OS08G0107100 PROTEIN-RELATED	coord: 37..307

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07647-RA	Carg07647-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane