Carg07639 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07639
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	PLATZ transcription factor family protein
Location	Carg_Chr13: 8253724 .. 8254489 (-)
RNA-Seq Expression	Carg07639
Synteny	Carg07639

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCAGACGATATGTTTATCATGATGTAATTCGATTGGGGGATCTTGAGAAGCTCATTGACTGTTCCCATATTCAGGTAATTTTTTCAATTTCGTTCATTAATTAAGGATTAAGCATAGAATTAAGTGAGATAATTAATTATGAAATTTGGCAGCCGTACACTATCAACGGCGCCAAAGTGATCTTCCTGAATTACCGGCCACAGTCACGGCCATGCAAGCAAGGCGCCTCCACCAACGTTTGCTTCACCTGCGACAGAATTCTCCAAGAACCCTTCCATTTCTGCTCTCTCTCTTGCAAGGTTTCTCCCTCGAACCGGTCTCGATTTCCCGACATGCATGCTAAAATCACCCGTTTCGTGAAATTCTCTATTTATAATATGATATTTATGGTAAGCAGTAATAAAAGGCTGAATATTATTTCAGGTGGATCACATGGTGTATCGAGGGGAGGATTTATGTGGAATTTTGCACCGGTTCGACGAGTCGGATTTCTCGTACTCACAATTCGAAGGGCTTAGAGGGGAGGGGCTAAAAGGGTTAGATGAGGATGGTCAAATAACACCAAATTCCACGGTTGAGGACTCATCGCAGTTCAATGAAGGCTCGTCTTGCTCCAATATCAACGACTTAAACCCCACCAACGTCTCGTCAGGAACTCATATCTTCAAAAGAAAAAACAAAACCGCCGATTTCCTTCCCGCCGGCATCGTTCTATCACTCAGTAGTAGAAGAAAAGGCGCCCCTCAAAGGTCTCCTCTTTCTTAA

mRNA sequence

GTCAGACGATATGTTTATCATGATGTAATTCGATTGGGGGATCTTGAGAAGCTCATTGACTGTTCCCATATTCAGCCGTACACTATCAACGGCGCCAAAGTGATCTTCCTGAATTACCGGCCACAGTCACGGCCATGCAAGCAAGGCGCCTCCACCAACGTTTGCTTCACCTGCGACAGAATTCTCCAAGAACCCTTCCATTTCTGCTCTCTCTCTTGCAAGGTGGATCACATGGTGTATCGAGGGGAGGATTTATGTGGAATTTTGCACCGGTTCGACGAGTCGGATTTCTCGTACTCACAATTCGAAGGGCTTAGAGGGGAGGGGCTAAAAGGGTTAGATGAGGATGGTCAAATAACACCAAATTCCACGGTTGAGGACTCATCGCAGTTCAATGAAGGCTCGTCTTGCTCCAATATCAACGACTTAAACCCCACCAACGTCTCGTCAGGAACTCATATCTTCAAAAGAAAAAACAAAACCGCCGATTTCCTTCCCGCCGGCATCGTTCTATCACTCAGTAGTAGAAGAAAAGGCGCCCCTCAAAGGTCTCCTCTTTCTTAA

Coding sequence (CDS)

GTCAGACGATATGTTTATCATGATGTAATTCGATTGGGGGATCTTGAGAAGCTCATTGACTGTTCCCATATTCAGCCGTACACTATCAACGGCGCCAAAGTGATCTTCCTGAATTACCGGCCACAGTCACGGCCATGCAAGCAAGGCGCCTCCACCAACGTTTGCTTCACCTGCGACAGAATTCTCCAAGAACCCTTCCATTTCTGCTCTCTCTCTTGCAAGGTGGATCACATGGTGTATCGAGGGGAGGATTTATGTGGAATTTTGCACCGGTTCGACGAGTCGGATTTCTCGTACTCACAATTCGAAGGGCTTAGAGGGGAGGGGCTAAAAGGGTTAGATGAGGATGGTCAAATAACACCAAATTCCACGGTTGAGGACTCATCGCAGTTCAATGAAGGCTCGTCTTGCTCCAATATCAACGACTTAAACCCCACCAACGTCTCGTCAGGAACTCATATCTTCAAAAGAAAAAACAAAACCGCCGATTTCCTTCCCGCCGGCATCGTTCTATCACTCAGTAGTAGAAGAAAAGGCGCCCCTCAAAGGTCTCCTCTTTCTTAA

Protein sequence

VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDRILQEPFHFCSLSCKVDHMVYRGEDLCGILHRFDESDFSYSQFEGLRGEGLKGLDEDGQITPNSTVEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKTADFLPAGIVLSLSSRRKGAPQRSPLS

Homology

[Close]

BLAST of Carg07639 vs. NCBI nr
Match: KAG7019779.1 (hypothetical protein SDJN02_18742, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 389.0 bits (998), Expect = 2.2e-104
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR 60
           VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR
Sbjct: 1   VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR 60

Query: 61  ILQEPFHFCSLSCKVDHMVYRGEDLCGILHRFDESDFSYSQFEGLRGEGLKGLDEDGQIT 120
           ILQEPFHFCSLSCKVDHMVYRGEDLCGILHRFDESDFSYSQFEGLRGEGLKGLDEDGQIT
Sbjct: 61  ILQEPFHFCSLSCKVDHMVYRGEDLCGILHRFDESDFSYSQFEGLRGEGLKGLDEDGQIT 120

Query: 121 PNSTVEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKTADFLPAGIVLSLSSRRKGA 180
           PNSTVEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKTADFLPAGIVLSLSSRRKGA
Sbjct: 121 PNSTVEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKTADFLPAGIVLSLSSRRKGA 180

Query: 181 PQRSPLS 188
           PQRSPLS
Sbjct: 181 PQRSPLS 187

[Close]

BLAST of Carg07639 vs. NCBI nr
Match: KAG6584187.1 (hypothetical protein SDJN03_20119, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 385.6 bits (989), Expect = 2.5e-103
Identity = 185/187 (98.93%), Postives = 186/187 (99.47%), Query Frame = 0


Query: 1   VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR 60
           VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR
Sbjct: 68  VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR 127

Query: 61  ILQEPFHFCSLSCKVDHMVYRGEDLCGILHRFDESDFSYSQFEGLRGEGLKGLDEDGQIT 120
           ILQEPFHFCSLSCKVDHMVYRGEDLCGILHRFDESDFSY+QFEGLRGEGLKGLDEDGQIT
Sbjct: 128 ILQEPFHFCSLSCKVDHMVYRGEDLCGILHRFDESDFSYAQFEGLRGEGLKGLDEDGQIT 187

Query: 121 PNSTVEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKTADFLPAGIVLSLSSRRKGA 180
           PNS VEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKTADFLPAGIVLSLSSRRKGA
Sbjct: 188 PNSMVEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKTADFLPAGIVLSLSSRRKGA 247

Query: 181 PQRSPLS 188
           PQRSPLS
Sbjct: 248 PQRSPLS 254

[Close]

BLAST of Carg07639 vs. NCBI nr
Match: XP_022924113.1 (uncharacterized protein LOC111431647 [Cucurbita moschata])

HSP 1 Score: 384.0 bits (985), Expect = 7.2e-103
Identity = 184/187 (98.40%), Postives = 186/187 (99.47%), Query Frame = 0


Query: 1   VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR 60
           VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR
Sbjct: 68  VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR 127

Query: 61  ILQEPFHFCSLSCKVDHMVYRGEDLCGILHRFDESDFSYSQFEGLRGEGLKGLDEDGQIT 120
           ILQEPFHFCSLSCKVDHMVY+GEDLCGILHRFDESDFSY+QFEGLRGEGLKGLDEDGQIT
Sbjct: 128 ILQEPFHFCSLSCKVDHMVYQGEDLCGILHRFDESDFSYAQFEGLRGEGLKGLDEDGQIT 187

Query: 121 PNSTVEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKTADFLPAGIVLSLSSRRKGA 180
           PNS VEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKTADFLPAGIVLSLSSRRKGA
Sbjct: 188 PNSMVEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKTADFLPAGIVLSLSSRRKGA 247

Query: 181 PQRSPLS 188
           PQRSPLS
Sbjct: 248 PQRSPLS 254

[Close]

BLAST of Carg07639 vs. NCBI nr
Match: XP_023520179.1 (uncharacterized protein LOC111783481 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 382.5 bits (981), Expect = 2.1e-102
Identity = 183/187 (97.86%), Postives = 185/187 (98.93%), Query Frame = 0


Query: 1   VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR 60
           VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR
Sbjct: 68  VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR 127

Query: 61  ILQEPFHFCSLSCKVDHMVYRGEDLCGILHRFDESDFSYSQFEGLRGEGLKGLDEDGQIT 120
           ILQEPFHFCSLSCKVDHMVYRGEDLCGILHRFDESDFSY+QFEGLRGEGLKGLDEDGQIT
Sbjct: 128 ILQEPFHFCSLSCKVDHMVYRGEDLCGILHRFDESDFSYAQFEGLRGEGLKGLDEDGQIT 187

Query: 121 PNSTVEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKTADFLPAGIVLSLSSRRKGA 180
           PNS V+DSSQFNEGSSCSN NDLNPTNVSSGTHIFKRKNKTADFLPAGIVLSLSSRRKGA
Sbjct: 188 PNSMVDDSSQFNEGSSCSNTNDLNPTNVSSGTHIFKRKNKTADFLPAGIVLSLSSRRKGA 247

Query: 181 PQRSPLS 188
           PQRSPLS
Sbjct: 248 PQRSPLS 254

[Close]

BLAST of Carg07639 vs. NCBI nr
Match: XP_023001010.1 (uncharacterized protein LOC111495276 [Cucurbita maxima])

HSP 1 Score: 382.5 bits (981), Expect = 2.1e-102
Identity = 183/187 (97.86%), Postives = 186/187 (99.47%), Query Frame = 0


Query: 1   VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR 60
           VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR
Sbjct: 68  VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR 127

Query: 61  ILQEPFHFCSLSCKVDHMVYRGEDLCGILHRFDESDFSYSQFEGLRGEGLKGLDEDGQIT 120
           ILQEPFHFCSLSCKVDHMVY+GEDLCGILHRFDESDFSY+QFEGLRGEGLKGLDEDGQIT
Sbjct: 128 ILQEPFHFCSLSCKVDHMVYQGEDLCGILHRFDESDFSYTQFEGLRGEGLKGLDEDGQIT 187

Query: 121 PNSTVEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKTADFLPAGIVLSLSSRRKGA 180
           PNS VEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNK+ADFLPAGIVLSLSSRRKGA
Sbjct: 188 PNSMVEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKSADFLPAGIVLSLSSRRKGA 247

Query: 181 PQRSPLS 188
           PQRSPLS
Sbjct: 248 PQRSPLS 254

[Close]

BLAST of Carg07639 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.7e-26
Identity = 81/202 (40.10%), Postives = 105/202 (51.98%), Query Frame = 0


Query: 1   VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR 60
           VRRYVYHDV+RL DL+KLIDCS++Q YTIN AKV+F+  RPQ+R  K   + N C +CDR
Sbjct: 59  VRRYVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFK--GAGNYCTSCDR 118

Query: 61  ILQEPFHFCSLSCKVDHMVYRGEDLCGILHRFDESDFSYSQFEGLRGEGLKGLDEDGQIT 120
            LQEP+  CSL CKVD ++ R  D+   L               +  + L   +     T
Sbjct: 119 SLQEPYIHCSLGCKVDFVMKRYRDITPFLKPCHTLTLGPDYI--IPQDLLTDDEVAAYET 178

Query: 121 PNSTVEDSSQFNEGSSCSNIND---LNPTNVSSGTHIFKRKNKTADFLPAGIVLSLS--- 180
           P STV D  +    SS S+ N+         ++ TH+  RK +T   L A    S     
Sbjct: 179 PRSTVVDGDESMSWSSASSDNNNAGAAAAYAATTTHVV-RKKRTGFCLCAKSANSYKEVS 238

Query: 181 ----------SRRKGAPQRSPL 187
                     +RRKG PQRSPL
Sbjct: 239 EDPDDISACINRRKGVPQRSPL 255

[Close]

BLAST of Carg07639 vs. ExPASy TrEMBL
Match: A0A6J1EBG2 (uncharacterized protein LOC111431647 OS=Cucurbita moschata OX=3662 GN=LOC111431647 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 3.5e-103
Identity = 184/187 (98.40%), Postives = 186/187 (99.47%), Query Frame = 0


Query: 1   VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR 60
           VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR
Sbjct: 68  VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR 127

Query: 61  ILQEPFHFCSLSCKVDHMVYRGEDLCGILHRFDESDFSYSQFEGLRGEGLKGLDEDGQIT 120
           ILQEPFHFCSLSCKVDHMVY+GEDLCGILHRFDESDFSY+QFEGLRGEGLKGLDEDGQIT
Sbjct: 128 ILQEPFHFCSLSCKVDHMVYQGEDLCGILHRFDESDFSYAQFEGLRGEGLKGLDEDGQIT 187

Query: 121 PNSTVEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKTADFLPAGIVLSLSSRRKGA 180
           PNS VEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKTADFLPAGIVLSLSSRRKGA
Sbjct: 188 PNSMVEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKTADFLPAGIVLSLSSRRKGA 247

Query: 181 PQRSPLS 188
           PQRSPLS
Sbjct: 248 PQRSPLS 254

[Close]

BLAST of Carg07639 vs. ExPASy TrEMBL
Match: A0A6J1KJX3 (uncharacterized protein LOC111495276 OS=Cucurbita maxima OX=3661 GN=LOC111495276 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.0e-102
Identity = 183/187 (97.86%), Postives = 186/187 (99.47%), Query Frame = 0


Query: 1   VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR 60
           VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR
Sbjct: 68  VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR 127

Query: 61  ILQEPFHFCSLSCKVDHMVYRGEDLCGILHRFDESDFSYSQFEGLRGEGLKGLDEDGQIT 120
           ILQEPFHFCSLSCKVDHMVY+GEDLCGILHRFDESDFSY+QFEGLRGEGLKGLDEDGQIT
Sbjct: 128 ILQEPFHFCSLSCKVDHMVYQGEDLCGILHRFDESDFSYTQFEGLRGEGLKGLDEDGQIT 187

Query: 121 PNSTVEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKTADFLPAGIVLSLSSRRKGA 180
           PNS VEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNK+ADFLPAGIVLSLSSRRKGA
Sbjct: 188 PNSMVEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKSADFLPAGIVLSLSSRRKGA 247

Query: 181 PQRSPLS 188
           PQRSPLS
Sbjct: 248 PQRSPLS 254

[Close]

BLAST of Carg07639 vs. ExPASy TrEMBL
Match: A0A0A0LUK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G056980 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.5e-90
Identity = 165/188 (87.77%), Postives = 176/188 (93.62%), Query Frame = 0


Query: 1   VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR 60
           VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCK G+STN CFTCDR
Sbjct: 70  VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSSTNACFTCDR 129

Query: 61  ILQEPFHFCSLSCKVDHMVYRGEDLCGILHRFDESDFSYSQFEGLRGEGLKGLDEDGQIT 120
           ILQEPFHFCSLSCKVDHMVY+GEDL  ILHRF+ESDFSYSQFEGLR +GL+G++EDGQ+T
Sbjct: 130 ILQEPFHFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRVDGLEGMEEDGQMT 189

Query: 121 PNSTVEDSSQ-FNEGSSCSNINDLNPTNVSSGTHIFKRKNKTADFLPAGIVLSLSSRRKG 180
           PNS VEDSSQ FN+ SSCSN+ND  PTNVSSGTHIFKRKNK  DFLPAGIVLSLSSRRKG
Sbjct: 190 PNSVVEDSSQHFNKSSSCSNMNDSAPTNVSSGTHIFKRKNKGTDFLPAGIVLSLSSRRKG 249

Query: 181 APQRSPLS 188
           APQR+PLS
Sbjct: 250 APQRAPLS 257

[Close]

BLAST of Carg07639 vs. ExPASy TrEMBL
Match: A0A5A7UHF9 (PLATZ transcription factor family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002180 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.0e-90
Identity = 165/187 (88.24%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 2   RRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDRI 61
           +RYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCK G+STN CFTCDRI
Sbjct: 40  KRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSSTNACFTCDRI 99

Query: 62  LQEPFHFCSLSCKVDHMVYRGEDLCGILHRFDESDFSYSQFEGLRGEGLKGLDEDGQITP 121
           LQEPFHFCSLSCKVDHMVY+GEDL  ILHRFDESDFSYSQFEGLR +GL+G++EDGQITP
Sbjct: 100 LQEPFHFCSLSCKVDHMVYQGEDLYSILHRFDESDFSYSQFEGLRVDGLEGMEEDGQITP 159

Query: 122 NSTVEDSS-QFNEGSSCSNINDLNPTNVSSGTHIFKRKNKTADFLPAGIVLSLSSRRKGA 181
           NS VEDSS QFN+ SSCS+IND  PTNVSSGTHIFKRKNK  DFLPAGIVLSLSSRRKGA
Sbjct: 160 NSVVEDSSQQFNKSSSCSSINDSAPTNVSSGTHIFKRKNKGTDFLPAGIVLSLSSRRKGA 219

Query: 182 PQRSPLS 188
           PQR+PLS
Sbjct: 220 PQRAPLS 226

[Close]

BLAST of Carg07639 vs. ExPASy TrEMBL
Match: A0A6J1C6S4 (uncharacterized protein LOC111008916 OS=Momordica charantia OX=3673 GN=LOC111008916 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.0e-90
Identity = 166/190 (87.37%), Postives = 178/190 (93.68%), Query Frame = 0


Query: 1   VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR 60
           VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQG S+N CFTCDR
Sbjct: 76  VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQG-SSNACFTCDR 135

Query: 61  ILQEPFHFCSLSCKVDHMVYRGEDLCGILHRFDESDFSYSQFEGLRGEGLKGLDEDGQIT 120
           ILQEPFHFCSLSCKVDHMVY+GEDLCGILHRFDESDFSYSQFEGLR +GL+G+D+DGQ+T
Sbjct: 136 ILQEPFHFCSLSCKVDHMVYQGEDLCGILHRFDESDFSYSQFEGLRVDGLEGIDDDGQMT 195

Query: 121 PNSTVEDSSQFNEGSSCSNINDLNPTN---VSSGTHIFKRKNKTADFLPAGIVLSLSSRR 180
           PNS VED SQFN+ SSCSN+++L PTN   VSSGTHIFKRKNK  DFLPAGIVLSLSSRR
Sbjct: 196 PNSGVEDPSQFNKASSCSNMSELAPTNNSVVSSGTHIFKRKNKGTDFLPAGIVLSLSSRR 255

Query: 181 KGAPQRSPLS 188
           KGAPQR+PLS
Sbjct: 256 KGAPQRAPLS 264

[Close]

BLAST of Carg07639 vs. TAIR 10
Match: AT1G31040.1 (PLATZ transcription factor family protein )

HSP 1 Score: 192.6 bits (488), Expect = 2.9e-49
Identity = 104/187 (55.61%), Postives = 129/187 (68.98%), Query Frame = 0


Query: 1   VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR 60
           VRRYVYHDV+RL DLEKLIDCS++QPYTINGAKVIFLN R QSR      S+NVCFTCDR
Sbjct: 72  VRRYVYHDVVRLSDLEKLIDCSYVQPYTINGAKVIFLNQRQQSR---AKVSSNVCFTCDR 131

Query: 61  ILQEPFHFCSLSCKVDHMVYRGEDLCGILHRFDESDFSYSQFEGLRGEGLKGLDEDGQIT 120
           ILQEPFHFCSLSCKVD++ Y+G+DL  IL+R DESDF+   FEGLR   + G D+ G+I+
Sbjct: 132 ILQEPFHFCSLSCKVDYLSYQGDDLSSILYRIDESDFT---FEGLR---MDGHDQLGEIS 191

Query: 121 PNSTVEDSSQFNEGSSCSNINDLNPTNVSSGTHIFKRKNKTADFLPAGIVLSLSSRRKGA 180
                ED    ++ S   N +       S      K+K   +++LP  ++ SL +RRKGA
Sbjct: 192 TMEDGEDILVISDESEQGNNSHKKEKKKS------KKKKPESNYLPGMVLSSLGNRRKGA 243

Query: 181 PQRSPLS 188
           P R+P S
Sbjct: 252 PHRAPFS 243

[Close]

BLAST of Carg07639 vs. TAIR 10
Match: AT2G12646.1 (PLATZ transcription factor family protein )

HSP 1 Score: 119.0 bits (297), Expect = 4.0e-27
Identity = 81/202 (40.10%), Postives = 105/202 (51.98%), Query Frame = 0


Query: 1   VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR 60
           VRRYVYHDV+RL DL+KLIDCS++Q YTIN AKV+F+  RPQ+R  K   + N C +CDR
Sbjct: 59  VRRYVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFK--GAGNYCTSCDR 118

Query: 61  ILQEPFHFCSLSCKVDHMVYRGEDLCGILHRFDESDFSYSQFEGLRGEGLKGLDEDGQIT 120
            LQEP+  CSL CKVD ++ R  D+   L               +  + L   +     T
Sbjct: 119 SLQEPYIHCSLGCKVDFVMKRYRDITPFLKPCHTLTLGPDYI--IPQDLLTDDEVAAYET 178

Query: 121 PNSTVEDSSQFNEGSSCSNIND---LNPTNVSSGTHIFKRKNKTADFLPAGIVLSLS--- 180
           P STV D  +    SS S+ N+         ++ TH+  RK +T   L A    S     
Sbjct: 179 PRSTVVDGDESMSWSSASSDNNNAGAAAAYAATTTHVV-RKKRTGFCLCAKSANSYKEVS 238

Query: 181 ----------SRRKGAPQRSPL 187
                     +RRKG PQRSPL
Sbjct: 239 EDPDDISACINRRKGVPQRSPL 255

[Close]

BLAST of Carg07639 vs. TAIR 10
Match: AT3G60670.1 (PLATZ transcription factor family protein )

HSP 1 Score: 114.4 bits (285), Expect = 1.0e-25
Identity = 73/202 (36.14%), Postives = 101/202 (50.00%), Query Frame = 0


Query: 1   VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR 60
           +RRYVY DV+R+ D  KL+DCS IQPYT N +KV+F+N RPQSR  +   S N+C TCDR
Sbjct: 60  IRRYVYRDVLRVEDGSKLMDCSLIQPYTTNSSKVVFINERPQSRQFR--GSGNICITCDR 119

Query: 61  ILQEPFHFCSLSCKVDHMVYRGEDLCGILHRFDESDFSYSQFEGLRGEGLKGLDEDGQIT 120
            LQ P+ FC LSCK+  ++ R   L G L   +  D +               DE    T
Sbjct: 120 SLQSPYLFCCLSCKISDVIMRQRGLSGFLRVCNVLDLT---------------DEVTTTT 179

Query: 121 PNSTVE--------DSSQFNEGS--------SCSNINDLNPTNVSSGTHIFKRKNKTADF 180
           P+ST+E          S  NEG         +C+   ++     SS +   +R  +    
Sbjct: 180 PSSTLEPTGSNRTSSESSGNEGEDMFWCQALACTATTEIVRKKRSSLSTTCRRVTEVVST 239

Query: 181 LPAGIVLSLSSRRKGAPQRSPL 187
                 ++  +RRK  PQR+PL
Sbjct: 240 TNTEAPVNFLNRRKNPPQRAPL 244

[Close]

BLAST of Carg07639 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-16
Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 0


Query: 1   VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR 60
           +RR  YHDVIR+ +++K +D + +Q Y IN AKV+FLN RPQ RP K     N C  C R
Sbjct: 66  IRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGK--GVINTCEVCYR 125

Query: 61  ILQEPFHFCSLSCKV 76
            L + F FCSL CK+
Sbjct: 126 SLVDSFRFCSLGCKI 138

[Close]

BLAST of Carg07639 vs. TAIR 10
Match: AT1G32700.2 (PLATZ transcription factor family protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-16
Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 0


Query: 1  VRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTNVCFTCDR 60
          +RR  YHDVIR+ +++K +D + +Q Y IN AKV+FLN RPQ RP K     N C  C R
Sbjct: 27 IRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGK--GVINTCEVCYR 86

Query: 61 ILQEPFHFCSLSCKV 76
           L + F FCSL CK+
Sbjct: 87 SLVDSFRFCSLGCKI 99

The following BLAST results are available for this feature:

BLAST of Carg07639 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7019779.1	2.2e-104	100.00	hypothetical protein SDJN02_18742, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6584187.1	2.5e-103	98.93	hypothetical protein SDJN03_20119, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022924113.1	7.2e-103	98.40	uncharacterized protein LOC111431647 [Cucurbita moschata]	[more]
XP_023520179.1	2.1e-102	97.86	uncharacterized protein LOC111783481 [Cucurbita pepo subsp. pepo]	[more]
XP_023001010.1	2.1e-102	97.86	uncharacterized protein LOC111495276 [Cucurbita maxima]	[more]

BLAST of Carg07639 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3Q4	5.7e-26	40.10	Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Carg07639 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EBG2	3.5e-103	98.40	uncharacterized protein LOC111431647 OS=Cucurbita moschata OX=3662 GN=LOC1114316...	[more]
A0A6J1KJX3	1.0e-102	97.86	uncharacterized protein LOC111495276 OS=Cucurbita maxima OX=3661 GN=LOC111495276...	[more]
A0A0A0LUK6	1.5e-90	87.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G056980 PE=4 SV=1	[more]
A0A5A7UHF9	2.0e-90	88.24	PLATZ transcription factor family protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A6J1C6S4	2.0e-90	87.37	uncharacterized protein LOC111008916 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]

BLAST of Carg07639 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31040.1	2.9e-49	55.61	PLATZ transcription factor family protein	[more]
AT2G12646.1	4.0e-27	40.10	PLATZ transcription factor family protein	[more]
AT3G60670.1	1.0e-25	36.14	PLATZ transcription factor family protein	[more]
AT1G32700.1	1.4e-16	50.67	PLATZ transcription factor family protein	[more]
AT1G32700.2	1.4e-16	50.67	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 2..75 e-value: 2.5E-28 score: 98.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..132
None	No IPR available	PANTHER	PTHR31065:SF45	SUBFAMILY NOT NAMED	coord: 1..187
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 1..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07639-RA	Carg07639-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010150	leaf senescence
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008270	zinc ion binding