Carg07610 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07610
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	squamosa promoter-binding-like protein 13A
Location	Carg_Chr13: 8113900 .. 8115975 (-)
RNA-Seq Expression	Carg07610
Synteny	Carg07610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAATGAACTGGAAAGAACAACCCAATCCATTCATTCATTCACTCACCACTCTCTCTCACTTCCCTTTTCATTTCACTTCCTTTCCCCCCTTTTCCTTCTCTTTTTTCTCGGGAACTTCAAACCTCCAATCTTCTAGGAACCCCAAAATCAAACCGCTAACAAAGTAAATGTTTTCATGGGTATGAACGGGATCTTGTAGCCTCAAACTTCAGTGATTTTGATTCAACTTTTTTGCAGGGGAGCTTCAGAAAATGGCGCCATCAACTTCAGGATCATCAAAGAGAGCCAGAGGAGCTCACAGTGGCGCCATTCAGCCAGTTTCTTGCCTTGTCGATGGCTGCAATTCAGATCTAAGCAACTGTAGAGACTACCACAGGCGCCATAAGGTCTGTGAGCTGCATTCCAAGACTCCTCAGGTCACCATCGCTGGCCTCAACCAGAGATTTTGCCAGCAGTGTAGTAGGTAACTTTCAGACACTGGTTTTTTTTTTTTTTTTTTTCTCTTTTTGGTCTTTCTTTTTTCCTTTTTTCTTTCTAATCATGGTATGTTTCTGTTCTCTGTCGCAAACTTTTGAGCACTACCCATTATTTTATTCTTCAAGAACTGTTGATGTTTTATGTCAAGAAATCTGTCCTCTTTCTGGGGTCTTAAACGTTTTTCCAGAACGCTTGCCGCTGGATTTAGTTGCGTTTTCGAGTCTTTTCAGGAGAAAATTCTCTGTTCATGAATGTTCCAAAACTTGCAGAAGCTTTTTCCCAATTTAGAGTTCATTTCAGTGACCAAATTCTGCAGCCATTAATGAATTCCCATCTGCTCTGTTCTGCTCTGTTTTTCTCTGCTCTGTTCTGCTCTGTTTTTCCGTTTTTCCAGAACGCTTGCCGCTGGATTTAGTTGCGGTTTCGAGTCTTTTCATGAGAAAATTCTCAGTTAATTAAAGTTGCAAAACTTTCAGAAGCTTTTTCCCAATTTAATGTTCATTTTAGTGAACAAATTCTGTAGCCATTAATGAATTCCCATCTGCTCTGTTCTGTTCTGTTCTGCTCTGTTTTCTCCCCCCATAGGTTTCATTCACTTGAGGAATTTGACGAAGGAAAGAGAAGCTGCCGGAAACGACTGGACGGCCACAACCGGCGGCGGAGAAAGCCTCAAACTGACCTCTTGCCTCGATCTGCTGGCCATTTGTCCTATCATCAAGGTTAGAATTTTTGGTTGTTTTTTAATGGAAAAATCTCAATTACTGAAGTAATATGCATTTCTTCCAGGTGCCCATTTGTTGCCATTTACAAGCTCGCAAGTTTTTCCACCGACCACTTTGAGCAGCCACGGGTGGTCGTCTGCAGGAGATCCCTCCGTCTTCCACAACCAGAACCAAGAACTCAATTTTCTCGAAAAACAGAGGCTTTTTGTGGAACCATCCAGCTACAAAGCGGCGCAACCACTGGGGTTCTTGCATGGCGGCCCGACAACATGCCGACCACTTCTCCGGAGTATCAATACCCTGTCGGAAAACACCGGCGGCGAAAGGAACAAGATGGTTTACTACCGGTTCAGAGTTGGAGTTAGTGAATCAGATTGTGCTCTCTCTCTTCTGTCATCGTCACAGCAGGCCGCCGACAGTGGTTCTTCTGGGCATTTGGGTTTGAGCAGAATCGAACAAGAACAGCAACAGCGTAGCGCCGCCATTTCTCTGCTGCAGCCATTGAGCCACCACCACCACCACCATAAACTCGACAGTTTTGAGAATTCTGAGTCCTCTTCGGTTCATGGGGCTGTTAATTTCCCCGAGATCTTCGGAATTCCCTCCGAGAATGCTGGAAATCAATCCCCTTCCACTCTTCCTTTTCACTGGGAGTAAGTAGAAACCAAAGGAAACAAATTCCTAATTATGTCTGCCTGTCAGTGTTCTAATATTAATAAACATGAAGAACTCTCTCCTGCGTTTGTTTCTTCCTGTTCCTTTTGTTTTTAACGAGTTTGCTTGCGCTACCATCTCTCCAAGAAGTCACTCAATTTCACTCAATCTCGAAACCGTATGAGTTTCGAACTTTTAATATCACACGTGCATTCTTCTTTG

mRNA sequence

TGAATGAACTGGAAAGAACAACCCAATCCATTCATTCATTCACTCACCACTCTCTCTCACTTCCCTTTTCATTTCACTTCCTTTCCCCCCTTTTCCTTCTCTTTTTTCTCGGGAACTTCAAACCTCCAATCTTCTAGGAACCCCAAAATCAAACCGCTAACAAAGTAAATGTTTTCATGGGTATGAACGGGATCTTGTAGCCTCAAACTTCAGTGATTTTGATTCAACTTTTTTGCAGGGGAGCTTCAGAAAATGGCGCCATCAACTTCAGGATCATCAAAGAGAGCCAGAGGAGCTCACAGTGGCGCCATTCAGCCAGTTTCTTGCCTTGTCGATGGCTGCAATTCAGATCTAAGCAACTGTAGAGACTACCACAGGCGCCATAAGGTCTGTGAGCTGCATTCCAAGACTCCTCAGGTCACCATCGCTGGCCTCAACCAGAGATTTTGCCAGCAGTGTAGTAGGTTTCATTCACTTGAGGAATTTGACGAAGGAAAGAGAAGCTGCCGGAAACGACTGGACGGCCACAACCGGCGGCGGAGAAAGCCTCAAACTGACCTCTTGCCTCGATCTGCTGGCCATTTGTCCTATCATCAAGGTGCCCATTTGTTGCCATTTACAAGCTCGCAAGTTTTTCCACCGACCACTTTGAGCAGCCACGGGTGGTCGTCTGCAGGAGATCCCTCCGTCTTCCACAACCAGAACCAAGAACTCAATTTTCTCGAAAAACAGAGGCTTTTTGTGGAACCATCCAGCTACAAAGCGGCGCAACCACTGGGGTTCTTGCATGGCGGCCCGACAACATGCCGACCACTTCTCCGGAGTATCAATACCCTGTCGGAAAACACCGGCGGCGAAAGGAACAAGATGGTTTACTACCGGTTCAGAGTTGGAGTTAGTGAATCAGATTGTGCTCTCTCTCTTCTGTCATCGTCACAGCAGGCCGCCGACAGTGGTTCTTCTGGGCATTTGGGTTTGAGCAGAATCGAACAAGAACAGCAACAGCGTAGCGCCGCCATTTCTCTGCTGCAGCCATTGAGCCACCACCACCACCACCATAAACTCGACAGTTTTGAGAATTCTGAGTCCTCTTCGGTTCATGGGGCTGTTAATTTCCCCGAGATCTTCGGAATTCCCTCCGAGAATGCTGGAAATCAATCCCCTTCCACTCTTCCTTTTCACTGGGAGTAAGTAGAAACCAAAGGAAACAAATTCCTAATTATGTCTGCCTGTCAGTGTTCTAATATTAATAAACATGAAGAACTCTCTCCTGCGTTTGTTTCTTCCTGTTCCTTTTGTTTTTAACGAGTTTGCTTGCGCTACCATCTCTCCAAGAAGTCACTCAATTTCACTCAATCTCGAAACCGTATGAGTTTCGAACTTTTAATATCACACGTGCATTCTTCTTTG

Coding sequence (CDS)

ATGGCGCCATCAACTTCAGGATCATCAAAGAGAGCCAGAGGAGCTCACAGTGGCGCCATTCAGCCAGTTTCTTGCCTTGTCGATGGCTGCAATTCAGATCTAAGCAACTGTAGAGACTACCACAGGCGCCATAAGGTCTGTGAGCTGCATTCCAAGACTCCTCAGGTCACCATCGCTGGCCTCAACCAGAGATTTTGCCAGCAGTGTAGTAGGTTTCATTCACTTGAGGAATTTGACGAAGGAAAGAGAAGCTGCCGGAAACGACTGGACGGCCACAACCGGCGGCGGAGAAAGCCTCAAACTGACCTCTTGCCTCGATCTGCTGGCCATTTGTCCTATCATCAAGGTGCCCATTTGTTGCCATTTACAAGCTCGCAAGTTTTTCCACCGACCACTTTGAGCAGCCACGGGTGGTCGTCTGCAGGAGATCCCTCCGTCTTCCACAACCAGAACCAAGAACTCAATTTTCTCGAAAAACAGAGGCTTTTTGTGGAACCATCCAGCTACAAAGCGGCGCAACCACTGGGGTTCTTGCATGGCGGCCCGACAACATGCCGACCACTTCTCCGGAGTATCAATACCCTGTCGGAAAACACCGGCGGCGAAAGGAACAAGATGGTTTACTACCGGTTCAGAGTTGGAGTTAGTGAATCAGATTGTGCTCTCTCTCTTCTGTCATCGTCACAGCAGGCCGCCGACAGTGGTTCTTCTGGGCATTTGGGTTTGAGCAGAATCGAACAAGAACAGCAACAGCGTAGCGCCGCCATTTCTCTGCTGCAGCCATTGAGCCACCACCACCACCACCATAAACTCGACAGTTTTGAGAATTCTGAGTCCTCTTCGGTTCATGGGGCTGTTAATTTCCCCGAGATCTTCGGAATTCCCTCCGAGAATGCTGGAAATCAATCCCCTTCCACTCTTCCTTTTCACTGGGAGTAA

Protein sequence

MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAGLNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLLPFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHGGPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHLGLSRIEQEQQQRSAAISLLQPLSHHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGNQSPSTLPFHWE

Homology

[Close]

BLAST of Carg07610 vs. NCBI nr
Match: KAG7019750.1 (Squamosa promoter-binding-like protein 13B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 635.6 bits (1638), Expect = 2.3e-178
Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0


Query: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60
           MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG
Sbjct: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL 120
           LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL
Sbjct: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL 120

Query: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180
           PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG
Sbjct: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180

Query: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHL 240
           GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHL
Sbjct: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHL 240

Query: 241 GLSRIEQEQQQRSAAISLLQPLSHHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAG 300
           GLSRIEQEQQQRSAAISLLQPLSHHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAG
Sbjct: 241 GLSRIEQEQQQRSAAISLLQPLSHHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAG 300

Query: 301 NQSPSTLPFHWE 313
           NQSPSTLPFHWE
Sbjct: 301 NQSPSTLPFHWE 312

[Close]

BLAST of Carg07610 vs. NCBI nr
Match: KAG6584159.1 (Squamosa promoter-binding-like protein 13B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 634.4 bits (1635), Expect = 5.1e-178
Identity = 311/312 (99.68%), Postives = 312/312 (100.00%), Query Frame = 0


Query: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60
           MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG
Sbjct: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL 120
           LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL
Sbjct: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL 120

Query: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180
           PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG
Sbjct: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180

Query: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHL 240
           GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHL
Sbjct: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHL 240

Query: 241 GLSRIEQEQQQRSAAISLLQPLSHHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAG 300
           GLSRIEQEQQQRSAAISLLQPLSHHHHHHKLD+FENSESSSVHGAVNFPEIFGIPSENAG
Sbjct: 241 GLSRIEQEQQQRSAAISLLQPLSHHHHHHKLDNFENSESSSVHGAVNFPEIFGIPSENAG 300

Query: 301 NQSPSTLPFHWE 313
           NQSPSTLPFHWE
Sbjct: 301 NQSPSTLPFHWE 312

[Close]

BLAST of Carg07610 vs. NCBI nr
Match: XP_022923707.1 (squamosa promoter-binding-like protein 13A [Cucurbita moschata] >XP_022923708.1 squamosa promoter-binding-like protein 13A [Cucurbita moschata])

HSP 1 Score: 628.2 bits (1619), Expect = 3.7e-176
Identity = 311/312 (99.68%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60
           MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG
Sbjct: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL 120
           LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL
Sbjct: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL 120

Query: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180
           PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG
Sbjct: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180

Query: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHL 240
           GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHL
Sbjct: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHL 240

Query: 241 GLSRIEQEQQQRSAAISLLQPLSHHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAG 300
           GLSRIEQEQQQRSAAISLLQPLS HHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAG
Sbjct: 241 GLSRIEQEQQQRSAAISLLQPLS-HHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAG 300

Query: 301 NQSPSTLPFHWE 313
           NQSPSTLPFHWE
Sbjct: 301 NQSPSTLPFHWE 311

[Close]

BLAST of Carg07610 vs. NCBI nr
Match: XP_023519233.1 (squamosa promoter-binding-like protein 13A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 620.9 bits (1600), Expect = 5.9e-174
Identity = 307/312 (98.40%), Postives = 308/312 (98.72%), Query Frame = 0


Query: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60
           MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG
Sbjct: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL 120
           LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRS GH SYHQGAHLL
Sbjct: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGHFSYHQGAHLL 120

Query: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180
           PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG
Sbjct: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180

Query: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHL 240
           GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAAD+GSSGHL
Sbjct: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADNGSSGHL 240

Query: 241 GLSRIEQEQQQRSAAISLLQPLSHHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAG 300
           GLS IEQEQQQRSAAISLLQPLS HHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAG
Sbjct: 241 GLSIIEQEQQQRSAAISLLQPLS-HHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAG 300

Query: 301 NQSPSTLPFHWE 313
           NQSPSTLPFHWE
Sbjct: 301 NQSPSTLPFHWE 311

[Close]

BLAST of Carg07610 vs. NCBI nr
Match: XP_023001168.1 (squamosa promoter-binding-like protein 13A [Cucurbita maxima] >XP_023001169.1 squamosa promoter-binding-like protein 13A [Cucurbita maxima])

HSP 1 Score: 615.5 bits (1586), Expect = 2.5e-172
Identity = 304/312 (97.44%), Postives = 307/312 (98.40%), Query Frame = 0


Query: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60
           MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG
Sbjct: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL 120
           LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGH SYHQGAHLL
Sbjct: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHFSYHQGAHLL 120

Query: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180
           PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQN ELNFLEKQRLFVEPSSYKAAQPLGFLHG
Sbjct: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNHELNFLEKQRLFVEPSSYKAAQPLGFLHG 180

Query: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHL 240
           GPTTCRPLLRSINTLSEN+GGERNKMVYY+FRVGVSESDCALSLLSSSQQAA+SGSSGHL
Sbjct: 181 GPTTCRPLLRSINTLSENSGGERNKMVYYKFRVGVSESDCALSLLSSSQQAAESGSSGHL 240

Query: 241 GLSRIEQEQQQRSAAISLLQPLSHHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAG 300
           GLSRIEQEQQQRSAAISLLQPLS  HHHHKLDSFE SESSSVHGAVNFPEIFGIPSENAG
Sbjct: 241 GLSRIEQEQQQRSAAISLLQPLS--HHHHKLDSFETSESSSVHGAVNFPEIFGIPSENAG 300

Query: 301 NQSPSTLPFHWE 313
           NQSPSTLPFHWE
Sbjct: 301 NQSPSTLPFHWE 310

[Close]

BLAST of Carg07610 vs. ExPASy Swiss-Prot
Match: B9DI20 (Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SPL13A PE=1 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.0e-48
Identity = 128/311 (41.16%), Postives = 164/311 (52.73%), Query Frame = 0


Query: 4   STSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAGLNQ 63
           S S SSKR RG   G  Q   CLVDGC+SD SNCR+YH+RHKVC++HSKTP VTI G  Q
Sbjct: 80  SRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQ 139

Query: 64  RFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLLPFT 123
           RFCQQCSRFH+LEEFDEGKRSCRKRLDGHNRRRRKPQ + + R A   +  QG+ LL F+
Sbjct: 140 RFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFS 199

Query: 124 -SSQVFPPTTLSSHGW-SSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHGG 183
             S VFP T++ +  W +S    +V  N +       + + +V  SS      +  +   
Sbjct: 200 GGSHVFPTTSVLNPSWGNSLVSVAVAANGSS----YGQSQSYVVGSSPAKTGIMFPISSS 259

Query: 184 PTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHLG 243
           P + R + +    L E     R   +  R    + +SDCALSLLSSS  +        L 
Sbjct: 260 PNSTRSIAKQFPFLQEEE-SSRTASLCERMTSCIHDSDCALSLLSSSSSSVPHLLQPPLS 319

Query: 244 LSRIEQEQQQRSAAISLLQPLSHHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGN 303
           LS+   E     + +                 FEN+ + S    +         S N   
Sbjct: 320 LSQEAVETVFYGSGL-----------------FENASAVSDGSVI---------SGNEAV 359

Query: 304 QSPSTLPFHWE 313
           + P T PFHWE
Sbjct: 380 RLPQTFPFHWE 359

[Close]

BLAST of Carg07610 vs. ExPASy Swiss-Prot
Match: P0DI11 (Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SPL13B PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.0e-48
Identity = 128/311 (41.16%), Postives = 164/311 (52.73%), Query Frame = 0


Query: 4   STSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAGLNQ 63
           S S SSKR RG   G  Q   CLVDGC+SD SNCR+YH+RHKVC++HSKTP VTI G  Q
Sbjct: 80  SRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQ 139

Query: 64  RFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLLPFT 123
           RFCQQCSRFH+LEEFDEGKRSCRKRLDGHNRRRRKPQ + + R A   +  QG+ LL F+
Sbjct: 140 RFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFS 199

Query: 124 -SSQVFPPTTLSSHGW-SSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHGG 183
             S VFP T++ +  W +S    +V  N +       + + +V  SS      +  +   
Sbjct: 200 GGSHVFPTTSVLNPSWGNSLVSVAVAANGSS----YGQSQSYVVGSSPAKTGIMFPISSS 259

Query: 184 PTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHLG 243
           P + R + +    L E     R   +  R    + +SDCALSLLSSS  +        L 
Sbjct: 260 PNSTRSIAKQFPFLQEEE-SSRTASLCERMTSCIHDSDCALSLLSSSSSSVPHLLQPPLS 319

Query: 244 LSRIEQEQQQRSAAISLLQPLSHHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGN 303
           LS+   E     + +                 FEN+ + S    +         S N   
Sbjct: 320 LSQEAVETVFYGSGL-----------------FENASAVSDGSVI---------SGNEAV 359

Query: 304 QSPSTLPFHWE 313
           + P T PFHWE
Sbjct: 380 RLPQTFPFHWE 359

[Close]

BLAST of Carg07610 vs. ExPASy Swiss-Prot
Match: Q49I55 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 6.8e-40
Identity = 112/264 (42.42%), Postives = 143/264 (54.17%), Query Frame = 0


Query: 4   STSGSSKRARGAHSGAIQP---VSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 63
           + +G++KR R A  G  Q     SC VDGC +DL  CRDYHRRHKVCE HSKTP V +AG
Sbjct: 80  AAAGAAKRPRPAGPGGQQQQQCPSCAVDGCRADLGKCRDYHRRHKVCEAHSKTPVVVVAG 139

Query: 64  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL 123
              RFCQQCSRFH L EFD  KRSCRKRLDGHNRRRRKPQ D +  SA  ++  QG    
Sbjct: 140 REMRFCQQCSRFHLLAEFDADKRSCRKRLDGHNRRRRKPQPDTM-ASASFIASQQGTRFS 199

Query: 124 PFTSSQV---FPPTTLSSHGWSSAGDPSVFHNQNQ---ELNFLEKQRLFV-----EPSSY 183
           PF   ++   +PP  + +       + S +H  +Q     +   +Q+ FV      P+  
Sbjct: 200 PFAHPRLEASWPPGVMKT-------EESPYHITHQIPLGSSSSSRQQHFVALGAATPAYA 259

Query: 184 KAAQPLGFLHGGPTT---------------CRPLLRSINTLSENTGGERNKMVYYRFRVG 239
           K  +   FL  G  +               C+PLLR+    SE++G   +KM   +    
Sbjct: 260 KEGRRFPFLQEGEISFATGVVLEPPAAAPACQPLLRT-GAPSESSGAGGSKMFSDQGLAR 319

[Close]

BLAST of Carg07610 vs. ExPASy Swiss-Prot
Match: Q49I57 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 8.8e-40
Identity = 112/265 (42.26%), Postives = 143/265 (53.96%), Query Frame = 0


Query: 4   STSGSSKRARGAHSGAIQP----VSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIA 63
           + +G++KR R A  G  Q      SC VDGC +DL  CRDYHRRHKVCE HSKTP V +A
Sbjct: 80  AAAGAAKRPRPAGPGGQQQQQQCPSCAVDGCRADLGKCRDYHRRHKVCEAHSKTPVVVVA 139

Query: 64  GLNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHL 123
           G   RFCQQCSRFH L EFD  KRSCRKRLDGHNRRRRKPQ D +  SA  ++  QG   
Sbjct: 140 GREMRFCQQCSRFHLLAEFDADKRSCRKRLDGHNRRRRKPQPDTM-ASASFIASQQGTRF 199

Query: 124 LPFTSSQV---FPPTTLSSHGWSSAGDPSVFHNQNQ---ELNFLEKQRLFV-----EPSS 183
            PF   ++   +PP  + +       + S +H  +Q     +   +Q+ FV      P+ 
Sbjct: 200 SPFAHPRLEASWPPGVMKT-------EESPYHITHQIPLGSSSSSRQQHFVALGAATPAY 259

Query: 184 YKAAQPLGFLHGGPTT---------------CRPLLRSINTLSENTGGERNKMVYYRFRV 239
            K  +   FL  G  +               C+PLLR+    SE++G   +KM   +   
Sbjct: 260 AKEGRRFPFLQEGEISFATGVVLEPPAAAPACQPLLRT-GAPSESSGAGGSKMFSDQGLA 319

[Close]

BLAST of Carg07610 vs. ExPASy Swiss-Prot
Match: Q6YZE8 (Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL16 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.4e-39
Identity = 127/368 (34.51%), Postives = 169/368 (45.92%), Query Frame = 0


Query: 2   APSTSGSSKRARG-AHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 61
           A ++S  +KR RG A +G  Q  SC VDGC  DLS CRDYHRRHKVCE HSKTP V ++G
Sbjct: 94  AAASSAPAKRPRGAAAAGQQQCPSCAVDGCKEDLSKCRDYHRRHKVCEAHSKTPLVVVSG 153

Query: 62  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL 121
              RFCQQCSRFH L+EFDE KRSCRKRLDGHNRRRRKPQ D +  SA +L+  QGA   
Sbjct: 154 REMRFCQQCSRFHLLQEFDEAKRSCRKRLDGHNRRRRKPQPDPM-NSASYLASQQGARFS 213

Query: 122 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 181
           PF +    P    S  G     +   + +    L    +Q+ FV  +S    +   FL  
Sbjct: 214 PFAT----PRPEASWTGMIKTEESPYYTHHQIPLGISSRQQHFVGSTS-DGGRRFPFLQE 273

Query: 182 G-----------------------PTTCRPLLRSINTLSENTGGERN---KMVYYRFRVG 241
           G                        + C+PLL+++       GG  +   KM        
Sbjct: 274 GEISFGTGAGAGGVPMDQAAAAAAASVCQPLLKTVAPPPPPHGGGGSGGGKMFSDGGLTQ 333

Query: 242 VSESDCALSLLS------------------------------SSQQAADSGSSGHLGLSR 301
           V +SDCALSLLS                              S  Q    G S     +R
Sbjct: 334 VLDSDCALSLLSAPANSTAIDVGGGRVVVQPTEHIPMAQPLISGLQFGGGGGSSAWFAAR 393

Query: 302 IEQEQQQRSAAISLLQPLSHHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGNQSP 313
              +    +AA +++   +            N+  SS    +N+  +F +  E + + + 
Sbjct: 394 PHHQAATGAAATAVVVSTAGFSCPVVESEQLNTVLSSNDNEMNYNGMFHVGGEGSSDGTS 453

[Close]

BLAST of Carg07610 vs. ExPASy TrEMBL
Match: A0A6J1EAD8 (squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC111431335 PE=4 SV=1)

HSP 1 Score: 628.2 bits (1619), Expect = 1.8e-176
Identity = 311/312 (99.68%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60
           MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG
Sbjct: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL 120
           LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL
Sbjct: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL 120

Query: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180
           PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG
Sbjct: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180

Query: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHL 240
           GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHL
Sbjct: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHL 240

Query: 241 GLSRIEQEQQQRSAAISLLQPLSHHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAG 300
           GLSRIEQEQQQRSAAISLLQPLS HHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAG
Sbjct: 241 GLSRIEQEQQQRSAAISLLQPLS-HHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAG 300

Query: 301 NQSPSTLPFHWE 313
           NQSPSTLPFHWE
Sbjct: 301 NQSPSTLPFHWE 311

[Close]

BLAST of Carg07610 vs. ExPASy TrEMBL
Match: A0A6J1KPQ7 (squamosa promoter-binding-like protein 13A OS=Cucurbita maxima OX=3661 GN=LOC111495386 PE=4 SV=1)

HSP 1 Score: 615.5 bits (1586), Expect = 1.2e-172
Identity = 304/312 (97.44%), Postives = 307/312 (98.40%), Query Frame = 0


Query: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60
           MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG
Sbjct: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL 120
           LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGH SYHQGAHLL
Sbjct: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHFSYHQGAHLL 120

Query: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180
           PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQN ELNFLEKQRLFVEPSSYKAAQPLGFLHG
Sbjct: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNHELNFLEKQRLFVEPSSYKAAQPLGFLHG 180

Query: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHL 240
           GPTTCRPLLRSINTLSEN+GGERNKMVYY+FRVGVSESDCALSLLSSSQQAA+SGSSGHL
Sbjct: 181 GPTTCRPLLRSINTLSENSGGERNKMVYYKFRVGVSESDCALSLLSSSQQAAESGSSGHL 240

Query: 241 GLSRIEQEQQQRSAAISLLQPLSHHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAG 300
           GLSRIEQEQQQRSAAISLLQPLS  HHHHKLDSFE SESSSVHGAVNFPEIFGIPSENAG
Sbjct: 241 GLSRIEQEQQQRSAAISLLQPLS--HHHHKLDSFETSESSSVHGAVNFPEIFGIPSENAG 300

Query: 301 NQSPSTLPFHWE 313
           NQSPSTLPFHWE
Sbjct: 301 NQSPSTLPFHWE 310

[Close]

BLAST of Carg07610 vs. ExPASy TrEMBL
Match: A0A6J1JZ22 (squamosa promoter-binding-like protein 13A OS=Cucurbita maxima OX=3661 GN=LOC111490133 PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 3.3e-130
Identity = 249/331 (75.23%), Postives = 275/331 (83.08%), Query Frame = 0


Query: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60
           MA STSGSSKRARGA++   QPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTI G
Sbjct: 70  MASSTSGSSKRARGANNAGSQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIGG 129

Query: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL 120
           L QRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAG  SYHQG+HLL
Sbjct: 130 LKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGPFSYHQGSHLL 189

Query: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPS----SYKAAQPLG 180
           P+T +QV+P TT+SSHGWSS G+ +  H ++Q+LNFLEKQ LFVE S    +YK AQ L 
Sbjct: 190 PYTRAQVYPSTTVSSHGWSSTGETAGLH-RDQQLNFLEKQSLFVEQSHHSNNYKTAQTLA 249

Query: 181 FLHGGP-TTCRPLLRSINTLSEN-----TGGERNKMVYYRFRVGVSESDCALSLLSSSQ- 240
           F+HGGP TTC+PLLRS+NTLSEN      GGERNKM+Y RFR+GVSESDCALSLLSS Q 
Sbjct: 250 FMHGGPTTTCQPLLRSMNTLSENGGGGGGGGERNKMIYDRFRIGVSESDCALSLLSSPQA 309

Query: 241 --------QAADSGSSGHLGLSRIEQEQQQRSAAISLLQPLSHHHHHHKLDSFENSESSS 300
                   Q A+SGSSGHL LSRI  EQ QRSAA+SLLQPLSHHH H   +S+ENS+S +
Sbjct: 310 QTDHQPQPQQAESGSSGHLDLSRI--EQHQRSAAVSLLQPLSHHHSH---NSYENSDSDN 369

Query: 301 VHGAVNFPEIFGIPSENAGNQSPSTLPFHWE 313
             GA+NFP IFGI SENAGN+SPSTLPFHWE
Sbjct: 370 HGGALNFPGIFGIASENAGNESPSTLPFHWE 394

[Close]

BLAST of Carg07610 vs. ExPASy TrEMBL
Match: A0A6J1GVH8 (squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC111457246 PE=4 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 2.8e-129
Identity = 247/335 (73.73%), Postives = 274/335 (81.79%), Query Frame = 0


Query: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60
           MA STSGSSKRARGA++   QPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTI G
Sbjct: 64  MASSTSGSSKRARGANNAGSQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIGG 123

Query: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL 120
           L QRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAG  SYHQG+HLL
Sbjct: 124 LKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGPFSYHQGSHLL 183

Query: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPS----SYKAAQPLG 180
            +TS+QV+P TT+SSHGWSS G+ +  H ++Q+LNFLEKQ LFVE S    +YK AQ L 
Sbjct: 184 AYTSAQVYPSTTVSSHGWSSTGETAALH-RDQQLNFLEKQSLFVEQSDHSNNYKTAQTLA 243

Query: 181 FLHGGP-TTCRPLLRSINTLSEN-----TGGERNKMVYYRFRVGVSESDCALSLLSSSQ- 240
           F+HGGP TTC+PLLRS+NTLSEN      GGERNKM+Y RFR+GVSESDCALSLLSS Q 
Sbjct: 244 FMHGGPTTTCQPLLRSMNTLSENGGGGGGGGERNKMIYDRFRIGVSESDCALSLLSSPQA 303

Query: 241 ------------QAADSGSSGHLGLSRIEQEQQQRSAAISLLQPLSHHHHHHKLDSFENS 300
                       Q A+SGSSGHL L RI  EQ QRSAA+SLLQPL+HHHH H  +S+ENS
Sbjct: 304 QTDHQPQQQPQPQQAESGSSGHLDLGRI--EQHQRSAAVSLLQPLNHHHHSH--NSYENS 363

Query: 301 ESSSVHGAVNFPEIFGIPSENAGNQSPSTLPFHWE 313
           +S +  GA+NFP IFGI SEN GN+SPSTLPFHWE
Sbjct: 364 DSDNHGGALNFPGIFGIASENPGNESPSTLPFHWE 393

[Close]

BLAST of Carg07610 vs. ExPASy TrEMBL
Match: A0A5A7UP61 (Squamosa promoter-binding-like protein 13A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004790 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 4.6e-108
Identity = 223/350 (63.71%), Postives = 241/350 (68.86%), Query Frame = 0


Query: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60
           MA STSGSSKRARG H+G  QPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG
Sbjct: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRS-AGHLSYHQGAHL 120
           L QRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRS AG  SYHQG  L
Sbjct: 61  LKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAGPFSYHQGPPL 120

Query: 121 LPFTSSQVFPPTTLSSHGWSSAG-----DPSVFHNQNQELNFLEKQR-LFVEPS------ 180
           LPFTSSQVFP TT+SSHGWSS G     DP V HN+N +LNFLEKQ+ +FVE S      
Sbjct: 121 LPFTSSQVFPSTTVSSHGWSSGGSDNATDPGVHHNRNPQLNFLEKQQSIFVETSDQTNNI 180

Query: 181 -SYKAAQPLGFLHGGPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLS 240
            +YKA+ PLG LHGG                  G ERNKM+Y RFR+G++ESDCALSLLS
Sbjct: 181 NNYKASPPLGLLHGG----------------GGGSERNKMIYDRFRIGINESDCALSLLS 240

Query: 241 SSQQAADSGSSGHLGLSRIEQEQQQRSAAISLLQPLS----------------------- 300
           S Q    S           +Q+QQQR+AAISLL PLS                       
Sbjct: 241 SPQTQIQSDHQPQ------QQQQQQRNAAISLLHPLSTTHQNAFDNSSDTSSSSVQISND 300

Query: 301 -HHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGNQSPSTLPFHWE 313
            HHHHHH      +      HG +NF  IFGI S+N GNQSPSTLPFHWE
Sbjct: 301 THHHHHH------HHHHHHPHGVLNFSGIFGISSDNPGNQSPSTLPFHWE 322

[Close]

BLAST of Carg07610 vs. TAIR 10
Match: AT5G50570.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 193.7 bits (491), Expect = 2.2e-49
Identity = 128/311 (41.16%), Postives = 164/311 (52.73%), Query Frame = 0


Query: 4   STSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAGLNQ 63
           S S SSKR RG   G  Q   CLVDGC+SD SNCR+YH+RHKVC++HSKTP VTI G  Q
Sbjct: 80  SRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQ 139

Query: 64  RFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLLPFT 123
           RFCQQCSRFH+LEEFDEGKRSCRKRLDGHNRRRRKPQ + + R A   +  QG+ LL F+
Sbjct: 140 RFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFS 199

Query: 124 -SSQVFPPTTLSSHGW-SSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHGG 183
             S VFP T++ +  W +S    +V  N +       + + +V  SS      +  +   
Sbjct: 200 GGSHVFPTTSVLNPSWGNSLVSVAVAANGSS----YGQSQSYVVGSSPAKTGIMFPISSS 259

Query: 184 PTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHLG 243
           P + R + +    L E     R   +  R    + +SDCALSLLSSS  +        L 
Sbjct: 260 PNSTRSIAKQFPFLQEEE-SSRTASLCERMTSCIHDSDCALSLLSSSSSSVPHLLQPPLS 319

Query: 244 LSRIEQEQQQRSAAISLLQPLSHHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGN 303
           LS+   E     + +                 FEN+ + S    +         S N   
Sbjct: 320 LSQEAVETVFYGSGL-----------------FENASAVSDGSVI---------SGNEAV 359

Query: 304 QSPSTLPFHWE 313
           + P T PFHWE
Sbjct: 380 RLPQTFPFHWE 359

[Close]

BLAST of Carg07610 vs. TAIR 10
Match: AT5G50670.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 193.7 bits (491), Expect = 2.2e-49
Identity = 128/311 (41.16%), Postives = 164/311 (52.73%), Query Frame = 0


Query: 4   STSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAGLNQ 63
           S S SSKR RG   G  Q   CLVDGC+SD SNCR+YH+RHKVC++HSKTP VTI G  Q
Sbjct: 80  SRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQ 139

Query: 64  RFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLLPFT 123
           RFCQQCSRFH+LEEFDEGKRSCRKRLDGHNRRRRKPQ + + R A   +  QG+ LL F+
Sbjct: 140 RFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFS 199

Query: 124 -SSQVFPPTTLSSHGW-SSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHGG 183
             S VFP T++ +  W +S    +V  N +       + + +V  SS      +  +   
Sbjct: 200 GGSHVFPTTSVLNPSWGNSLVSVAVAANGSS----YGQSQSYVVGSSPAKTGIMFPISSS 259

Query: 184 PTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHLG 243
           P + R + +    L E     R   +  R    + +SDCALSLLSSS  +        L 
Sbjct: 260 PNSTRSIAKQFPFLQEEE-SSRTASLCERMTSCIHDSDCALSLLSSSSSSVPHLLQPPLS 319

Query: 244 LSRIEQEQQQRSAAISLLQPLSHHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGN 303
           LS+   E     + +                 FEN+ + S    +         S N   
Sbjct: 320 LSQEAVETVFYGSGL-----------------FENASAVSDGSVI---------SGNEAV 359

Query: 304 QSPSTLPFHWE 313
           + P T PFHWE
Sbjct: 380 RLPQTFPFHWE 359

[Close]

BLAST of Carg07610 vs. TAIR 10
Match: AT5G50570.2 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 193.7 bits (491), Expect = 2.2e-49
Identity = 128/311 (41.16%), Postives = 164/311 (52.73%), Query Frame = 0


Query: 4   STSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAGLNQ 63
           S S SSKR RG   G  Q   CLVDGC+SD SNCR+YH+RHKVC++HSKTP VTI G  Q
Sbjct: 80  SRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQ 139

Query: 64  RFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLLPFT 123
           RFCQQCSRFH+LEEFDEGKRSCRKRLDGHNRRRRKPQ + + R A   +  QG+ LL F+
Sbjct: 140 RFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFS 199

Query: 124 -SSQVFPPTTLSSHGW-SSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHGG 183
             S VFP T++ +  W +S    +V  N +       + + +V  SS      +  +   
Sbjct: 200 GGSHVFPTTSVLNPSWGNSLVSVAVAANGSS----YGQSQSYVVGSSPAKTGIMFPISSS 259

Query: 184 PTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHLG 243
           P + R + +    L E     R   +  R    + +SDCALSLLSSS  +        L 
Sbjct: 260 PNSTRSIAKQFPFLQEEE-SSRTASLCERMTSCIHDSDCALSLLSSSSSSVPHLLQPPLS 319

Query: 244 LSRIEQEQQQRSAAISLLQPLSHHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGN 303
           LS+   E     + +                 FEN+ + S    +         S N   
Sbjct: 320 LSQEAVETVFYGSGL-----------------FENASAVSDGSVI---------SGNEAV 359

Query: 304 QSPSTLPFHWE 313
           + P T PFHWE
Sbjct: 380 RLPQTFPFHWE 359

[Close]

BLAST of Carg07610 vs. TAIR 10
Match: AT2G42200.1 (squamosa promoter binding protein-like 9 )

HSP 1 Score: 127.5 bits (319), Expect = 1.9e-29
Identity = 91/239 (38.08%), Postives = 129/239 (53.97%), Query Frame = 0


Query: 4   STSG--SSKRARGAHSG-AIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 63
           S+SG  S++R RG  SG + Q   C V+GC  DL+N + Y+ RH+VC +HSKTP+VT+AG
Sbjct: 50  SSSGGRSNRRVRGGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAG 109

Query: 64  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL 123
           + QRFCQQCSRFH L EFD  KRSCR+RL GHN RRRKPQ    P S   L+   G    
Sbjct: 110 IEQRFCQQCSRFHQLPEFDLEKRSCRRRLAGHNERRRKPQ----PASLSVLASRYG---- 169

Query: 124 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 183
                ++ P  +L  +G   AG    F   NQE+ +   + L         + P   ++ 
Sbjct: 170 -----RIAP--SLYENG--DAGMNGSFLG-NQEIGWPSSRTLDTRVMRRPVSSPSWQINP 229

Query: 184 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGH 240
                +  +    T   +      K+  Y+   G+ +S+CALSLLS+  Q  D+ ++ +
Sbjct: 230 MNVFSQGSVGGGGTSFSSPEIMDTKLESYK---GIGDSNCALSLLSNPHQPHDNNNNNN 267

[Close]

BLAST of Carg07610 vs. TAIR 10
Match: AT1G69170.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 125.2 bits (313), Expect = 9.4e-29
Identity = 59/97 (60.82%), Postives = 73/97 (75.26%), Query Frame = 0


Query: 9   SKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAGLNQRFCQQ 68
           SK++R ++  +  P+ C V GC+ DLS+ +DYH+RH+VCE HSKT  V + GL QRFCQQ
Sbjct: 109 SKKSRASNLCSQNPL-CQVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQ 168

Query: 69  CSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLP 106
           CSRFH L EFD+GKRSCR+RL GHN RRRKP    LP
Sbjct: 169 CSRFHFLSEFDDGKRSCRRRLAGHNERRRKPAFYFLP 204

The following BLAST results are available for this feature:

BLAST of Carg07610 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7019750.1	2.3e-178	100.00	Squamosa promoter-binding-like protein 13B [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6584159.1	5.1e-178	99.68	Squamosa promoter-binding-like protein 13B, partial [Cucurbita argyrosperma subs...	[more]
XP_022923707.1	3.7e-176	99.68	squamosa promoter-binding-like protein 13A [Cucurbita moschata] >XP_022923708.1 ...	[more]
XP_023519233.1	5.9e-174	98.40	squamosa promoter-binding-like protein 13A [Cucurbita pepo subsp. pepo]	[more]
XP_023001168.1	2.5e-172	97.44	squamosa promoter-binding-like protein 13A [Cucurbita maxima] >XP_023001169.1 sq...	[more]

BLAST of Carg07610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9DI20	3.0e-48	41.16	Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
P0DI11	3.0e-48	41.16	Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
Q49I55	6.8e-40	42.42	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1	[more]
Q49I57	8.8e-40	42.26	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1	[more]
Q6YZE8	3.4e-39	34.51	Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of Carg07610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EAD8	1.8e-176	99.68	squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1KPQ7	1.2e-172	97.44	squamosa promoter-binding-like protein 13A OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1JZ22	3.3e-130	75.23	squamosa promoter-binding-like protein 13A OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1GVH8	2.8e-129	73.73	squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A5A7UP61	4.6e-108	63.71	Squamosa promoter-binding-like protein 13A OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of Carg07610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50570.1	2.2e-49	41.16	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50670.1	2.2e-49	41.16	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50570.2	2.2e-49	41.16	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT2G42200.1	1.9e-29	38.08	squamosa promoter binding protein-like 9	[more]
AT1G69170.1	9.4e-29	60.82	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 25..98 e-value: 4.8E-31 score: 106.9
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 22..99 score: 32.102936
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 16..86 e-value: 4.9E-35 score: 121.5
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 23..104
None	No IPR available	PIRSR	PIRSR037575-1	PIRSR037575-1	coord: 17..98 e-value: 1.2E-38 score: 129.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 296..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..312
None	No IPR available	PANTHER	PTHR31251:SF144	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A ISOFORM X1	coord: 1..312
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 1..312

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07610-RA	Carg07610-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding