Carg07590 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07590
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	WD repeat-containing protein 74-like
Location	Carg_Chr13: 8010817 .. 8015443 (+)
RNA-Seq Expression	Carg07590
Synteny	Carg07590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCGTACCACGAAGGTCGATTGCCCCGGCTGTCCTCCGCTTCGTGCCTTGACGTTCGATGTGCTTGGTCTAATCAAAGGTAATAATGGCAGCTATTTCACTATTTTTCTCTTGATTTTCTTCTAAGTTTGTTGTTTTGCCATTGTACAGTCATCGAAGCTCGGGGCAAGGAAGGAGAGATTCCGAAAGTGGTTGAGAGGTGGGGGGAACCTGATTTCTCCAAATCTGTGCTTGCAGCTTCTCTTGTTGATCGAAAATTCGACCCTGTAGGTTTCTTTCTTGCCGCTTTTTTTAACCGCCAACTGTTATCATATTCTCTTGTACAAAGTCTGTATGGGGTTGTTTGTTGCTCACTAAGTGTTGTAATTTTGCTTGTCATTGTTATGGATTCGTCTTTTATAATTGAGCTGGAAATTTGATGAGTTGGGTCTATGAATGTGACTAGTATTAGAATTAATATTAGTATGCTTCACTTGCTTTCAGTTTTTTACTGATAAGCTTACGTTAAAATGTCGTTTTGATTGTCATTGGAAGTTCTTGATTTACAATATTTTGTGTTATCCATCTAGGCTGTCAGTGTTGTCTCTTTTGATATATGTTAATCTTCATTGATTAGTGAGGGTTATACCGACCTCTACTGGGTTGATCTTCTGGTTGCCAGATTATGTCTTTCACTTCTCATTTAACCATTCAAACGCTACATCATTCTTAGTGCACCTAATCACATCCTTTTCTTTTTTAATTGCAGTTACTAGCTGTTGCTCGAAAAAATGGGTTGGTAAGTTGTTTAGATTTCCAGTAATGTGAATCCTGCACACATTTATTTGATTTTAAACATATCAGTGTACTCTTTGCATAATCATGTTTTTGTTGTATGCTGTAGATTGAAGTTCTTAATCCTTTGAATGGCAATCTTCACGTTGCAATTTCGGACAATACTGATACTTCGCCTCCACCAAAAGATGAAGCTATTGTTGGAATGCATTTACTTTCAAAAGATGAATCGGAGTTGGCATCTAGGTTATGTATCAATTTATAATTCATGAGCTTGTTAATGTGATAGAAGTGCAAAGGTTACCATCCTTTTGTTAACGATGAAAAATGAAAAGATATTTTTCTTAAACTATCTGGCTGCTTCCCCAAGGCATTTATGATGAAATTCCTCTTGGTTTGGTTATTTACTTTTAGGCGTTGCACCTTGCTTTCATGCACAACAAAAGGAAATGCAATCATGAGGACGATTGAATTTTCTAGTTCATCTTCAGAAGATACCTCTACCAATCTTGCACAAACGTGGAAAATATGTAGTTCGGGTGATGTTATGTGTTCTAAAGTTGACGGAAGTGAAACCCACGCGTTGTTTGGAGGGTGAGTTGGGATCATGTTTGAATTTTTGTGTTATTCTTTTATTGGCATTAACAACCTTGACCATTTTATATGCTCAGGAAGGGTGTTGAAGTTAATATGTGGAATCTAGAACAGTGTACTAAGATTTGGACAGCAAAAGCAGTATACTTCCTCATTCTTCTCTGCACATTTGTACAAAGCAGCCTACATATTTCTAGAGTATTTTTTGATATCCTTTCGAAACATTTTGATTTTATACAGCCGAAGAAGAACAGCCTTGGTATCTTCACACCAACTTGGTTCACATCAGCAACATTTCTTAGTAAAGATGAACACCGTAAGTTTGCAGCTGGTACCAACAGCCATCAGGTAATTCATATCAGTTTCTCATGGTTATACAAGTTACCGAATCGGAAACATATTACAAAGGAGAATGGAGATGTAGAGACAATTTCAGGGAAAGAGCGTATAAATTAATTGCACAGATAGTGTCTGATATGGTTTTGATTTCTATTTCAAATATAATCAATGCTTTATTTTGAGCCTTTAAGAGAATTGTTGATATCTGATTATAGGCAAAAGCACTACAGCTCTTGTACAATGTATCTTTGTCCTCTTTATTTTAAATTTTATATCCATTATGATATAGATATAAACCGCTTATTTTGATGTATGAATCATATCACTGATTTTTAATGGGGTGGGTGATTAACCAATTTAGGTTCGACTGTATGACATCTCTGCTCAGAAGAGACCTGTCATCTCATTTGATTTTCGAGAGACTCCTATTAAAGCCTTGGCAGAAGATGTAGATGGTAACACAATATTTGTGGGGAATGCATCTGGTGATCTTGCATCTTTCGATATTCGCAATGGTAAAATTTTTTATGTACTAGATCTTTCTGATTTAATAATCTGGGGTTTCTATATCTTTCACACATTTCGGAAAGTTTATTTCTTGACTTATGTGGGTTCCTCCTATCTTTTATCTTGAGAAGTTGGGTTGTTTTAATAGGGGATACCATCATGGTGCCTTGATTATTTCAGCTGAAAATGCACAAAGATGTGAGGTTGTAGACTTTATGAATTATGACTTGGGAAGTTTGGGTATGCTGCCTTACAATTTCACACAATGTTTGGTCCCTGTACTGATTTGAACTCCTGTATGCTGGGATTGACTTTATGAGCTTTTACCATATTACTGTTGCATGATCACTTCAATACCTTGAATTAGTTTACAGACGTCACCTTTTTTACCTGTTTCTTTATAATGATGAGGCAATAAGAAGATGCAGAGGGGTTACAATTTTCTCCAGCATTTTTGTATGGATCCTGCTTCATCCAAACAGAGAACTGCAGTCTTGACTTACACCTATCTTTTTTAGAAAGGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAACAAATATTTTTTCTATTGACCTGCAATTCCGAGTAGTATTCACCTTTTATTTCACGTTTAGTCTAAAATTCATCTTCTTCTTCTCAATGTCTGTTGGGATCTATTTGATTGTTCCCTGATAGTCTTGAGTTTTTATAGATTATGTTGCACCGTTACCTCTATGATACTTGTAAGTAGCAGTTGATTGAAGTTTTTATTATGGCAATATTTTATTTGCTTGACTTGTTTCTCACAGGAAAGCTATTGGGTTGCTTCTTGGGGAAATGTTCTGGCAGCATAAGATCCATCGCCAGGCACCCGGAATTCCCAGTCATAGCATCATGTGGTGGGATATATTTTCCAATATGACAATTATTTAGCACTTCTCTGTCTGCTTCTGCATGTGAAAATCTTGTATTTTTACATGCTTTGAAACATCCATGGAAGAATCCTCTCTGCATACCAAGCCATACTCACCTTTTATGTTAAAAAGTTGCATTTTTATCACTAAATTTATGTGGTGATGTTGAAATCTCTATTGTAGTAAAACCTCTTGGTGTTTTTGGGAGTTTTTCTTCCCCATCACATTCATCAATGTAATTGTTTACCTGTCAATATATCTACTTATGGTGATGTTGAAATCTTTTTCCAGGACTCGATAGTTATGTGCGCTTCTGGGATATAAAGACAAGGCAACTTCTGTCTGCGGTAAGTTTTCACAGTTCTAGTAAAAATTGGTTGTTTAGATTCATCATTCAGAAAATAACGGTGTTCAAGAAAAGTTTGTCATACTGTACCAGAATGAACATGTTTGAAAAAGATAATGTCAATTGTATGGACTAATTTGCACCATTAATGTGATTGCATTTAGTGACTCAAAGCTGTTTATAAATCTCTCAACATTGCTTGGTTAAAAGTTCACAAGAATATTTAATAATGCGACTTGTATATTTTTAGTACAAGAAAGGGGAAAAAATAGCATTTGATGCATTAATGTAAGCTGGGACTATATACCATATTCATATTTGTTCATTTATGTGCAGGTATTCCTAAAGCAACATCTTACTGGTGTTGTCTTTGATTCTCATTTTGTTGAAGAAGGTTAGATAAGTTGTCCACCCTTATCCCCCAGTGGTACCATCAAACTAATGTGCTCAATCTAGTTTATTCATTATCTCATTTACATTTGTCTGAGCAGATGTAACACACTCTGCAGTAGAGATCCAACAGGAAACAGAGGTTACTCAAACTGTCAACGAGGAGGAACACGTTCCTCAGAAGAGAAAAAAGGCATTTAAAGAAGACGGTGAAGGCGGAAAGAGGAAAGGTAGCAAGACCATAGACAAAGAAAACAAAAAAAGCAGAAGGAAGTCCCATCGAGAAATCGAAAGTAAGCAGAGGTAGGAGTTACTTGGTTATTGAAGAAGCATAAAGGTAGTTCATGTTATGATCTATTCAGTCAGCAGATAGTGTGGGAAATTGGTGAGTACAAGAAGAGTTACTTATCTCACCAATGCACTGAATTTTGAACCAAATCATGATTTTTATACGGGAGGCTCGGGGTAAATACCTGAATGCTTGTGGATACGCAGGCTCCATCATTTTTCGACTTCTGACCTGCAAAGTAGGAATGATTCCATTGGTAGCAGTTCAAGCACGTACTACTTTAGGGCCCCAATGTAACATATTTTATTTTTCCATATTACTAGTGGTCATAAGTATTTGAGTATTCTACCCATTGTGTTTTAGTTTAGCCCCTTCATTTTTATACATAGTTACTGGAAAGTTGGGGCATCTCAACTTATGTGAGTTCAATATTATTTCAATTTGTATTTGTGAGTTCTAACTTTTTTTTTGGAGAACAAGAAC

mRNA sequence

ATGCCTCGTACCACGAAGGTCGATTGCCCCGGCTGTCCTCCGCTTCGTGCCTTGACGTTCGATGTGCTTGGTCTAATCAAAGTCATCGAAGCTCGGGGCAAGGAAGGAGAGATTCCGAAAGTGGTTGAGAGGTGGGGGGAACCTGATTTCTCCAAATCTGTGCTTGCAGCTTCTCTTGTTGATCGAAAATTCGACCCTTTACTAGCTGTTGCTCGAAAAAATGGGTTGATTGAAGTTCTTAATCCTTTGAATGGCAATCTTCACGTTGCAATTTCGGACAATACTGATACTTCGCCTCCACCAAAAGATGAAGCTATTGTTGGAATGCATTTACTTTCAAAAGATGAATCGGAGTTGGCATCTAGGCGTTGCACCTTGCTTTCATGCACAACAAAAGGAAATGCAATCATGAGGACGATTGAATTTTCTAGTTCATCTTCAGAAGATACCTCTACCAATCTTGCACAAACGTGGAAAATATGTAGTTCGGGTGATGTTATGTGTTCTAAAGTTGACGGAAGTGAAACCCACGCGTTGTTTGGAGGGAAGGGTGTTGAAGTTAATATGTGGAATCTAGAACAGTGTACTAAGATTTGGACAGCAAAAGCAGTATACTTCCTCATTCTTCTCTGCACATTTGTACAAAGCAGCCTACATATTTCTAGAGTATTTTTTGATATCCTTTCGAAACATTTTGATTTTATACAGCCGAAGAAGAACAGCCTTGGTATCTTCACACCAACTTGGTTCACATCAGCAACATTTCTTAGTAAAGATGAACACCGTAAGTTTGCAGCTGGTACCAACAGCCATCAGGTTCGACTGTATGACATCTCTGCTCAGAAGAGACCTGTCATCTCATTTGATTTTCGAGAGACTCCTATTAAAGCCTTGGCAGAAGATGTAGATGGTAACACAATATTTGTGGGGAATGCATCTGGTGATCTTGCATCTTTCGATATTCGCAATGGAAAGCTATTGGGTTGCTTCTTGGGGAAATGTTCTGGCAGCATAAGATCCATCGCCAGGCACCCGGAATTCCCAGTCATAGCATCATGTGGACTCGATAGTTATGTGCGCTTCTGGGATATAAAGACAAGGCAACTTCTGTCTGCGGTATTCCTAAAGCAACATCTTACTGGTGTTGTCTTTGATTCTCATTTTGTTGAAGAAGATGTAACACACTCTGCAGTAGAGATCCAACAGGAAACAGAGGTTACTCAAACTGTCAACGAGGAGGAACACGTTCCTCAGAAGAGAAAAAAGGCATTTAAAGAAGACGGTGAAGGCGGAAAGAGGAAAGGTAGCAAGACCATAGACAAAGAAAACAAAAAAAGCAGAAGGAAGTCCCATCGAGAAATCGAAAGTAAGCAGAGGTAGGAGTTACTTGGTTATTGAAGAAGCATAAAGGTAGTTCATGTTATGATCTATTCAGTCAGCAGATAGTGTGGGAAATTGGTGAGTACAAGAAGAGTTACTTATCTCACCAATGCACTGAATTTTGAACCAAATCATGATTTTTATACGGGAGGCTCGGGGTAAATACCTGAATGCTTGTGGATACGCAGGCTCCATCATTTTTCGACTTCTGACCTGCAAAGTAGGAATGATTCCATTGGTAGCAGTTCAAGCACGTACTACTTTAGGGCCCCAATGTAACATATTTTATTTTTCCATATTACTAGTGGTCATAAGTATTTGAGTATTCTACCCATTGTGTTTTAGTTTAGCCCCTTCATTTTTATACATAGTTACTGGAAAGTTGGGGCATCTCAACTTATGTGAGTTCAATATTATTTCAATTTGTATTTGTGAGTTCTAACTTTTTTTTTGGAGAACAAGAAC

Coding sequence (CDS)

ATGCCTCGTACCACGAAGGTCGATTGCCCCGGCTGTCCTCCGCTTCGTGCCTTGACGTTCGATGTGCTTGGTCTAATCAAAGTCATCGAAGCTCGGGGCAAGGAAGGAGAGATTCCGAAAGTGGTTGAGAGGTGGGGGGAACCTGATTTCTCCAAATCTGTGCTTGCAGCTTCTCTTGTTGATCGAAAATTCGACCCTTTACTAGCTGTTGCTCGAAAAAATGGGTTGATTGAAGTTCTTAATCCTTTGAATGGCAATCTTCACGTTGCAATTTCGGACAATACTGATACTTCGCCTCCACCAAAAGATGAAGCTATTGTTGGAATGCATTTACTTTCAAAAGATGAATCGGAGTTGGCATCTAGGCGTTGCACCTTGCTTTCATGCACAACAAAAGGAAATGCAATCATGAGGACGATTGAATTTTCTAGTTCATCTTCAGAAGATACCTCTACCAATCTTGCACAAACGTGGAAAATATGTAGTTCGGGTGATGTTATGTGTTCTAAAGTTGACGGAAGTGAAACCCACGCGTTGTTTGGAGGGAAGGGTGTTGAAGTTAATATGTGGAATCTAGAACAGTGTACTAAGATTTGGACAGCAAAAGCAGTATACTTCCTCATTCTTCTCTGCACATTTGTACAAAGCAGCCTACATATTTCTAGAGTATTTTTTGATATCCTTTCGAAACATTTTGATTTTATACAGCCGAAGAAGAACAGCCTTGGTATCTTCACACCAACTTGGTTCACATCAGCAACATTTCTTAGTAAAGATGAACACCGTAAGTTTGCAGCTGGTACCAACAGCCATCAGGTTCGACTGTATGACATCTCTGCTCAGAAGAGACCTGTCATCTCATTTGATTTTCGAGAGACTCCTATTAAAGCCTTGGCAGAAGATGTAGATGGTAACACAATATTTGTGGGGAATGCATCTGGTGATCTTGCATCTTTCGATATTCGCAATGGAAAGCTATTGGGTTGCTTCTTGGGGAAATGTTCTGGCAGCATAAGATCCATCGCCAGGCACCCGGAATTCCCAGTCATAGCATCATGTGGACTCGATAGTTATGTGCGCTTCTGGGATATAAAGACAAGGCAACTTCTGTCTGCGGTATTCCTAAAGCAACATCTTACTGGTGTTGTCTTTGATTCTCATTTTGTTGAAGAAGATGTAACACACTCTGCAGTAGAGATCCAACAGGAAACAGAGGTTACTCAAACTGTCAACGAGGAGGAACACGTTCCTCAGAAGAGAAAAAAGGCATTTAAAGAAGACGGTGAAGGCGGAAAGAGGAAAGGTAGCAAGACCATAGACAAAGAAAACAAAAAAAGCAGAAGGAAGTCCCATCGAGAAATCGAAAGTAAGCAGAGGTAG

Protein sequence

MPRTTKVDCPGCPPLRALTFDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLVDRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESELASRRCTLLSCTTKGNAIMRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHALFGGKGVEVNMWNLEQCTKIWTAKAVYFLILLCTFVQSSLHISRVFFDILSKHFDFIQPKKNSLGIFTPTWFTSATFLSKDEHRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIKALAEDVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPVIASCGLDSYVRFWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVEIQQETEVTQTVNEEEHVPQKRKKAFKEDGEGGKRKGSKTIDKENKKSRRKSHREIESKQR

Homology

[Close]

BLAST of Carg07590 vs. NCBI nr
Match: KAG7019732.1 (WD repeat-containing protein 74, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 905.6 bits (2339), Expect = 1.8e-259
Identity = 459/459 (100.00%), Postives = 459/459 (100.00%), Query Frame = 0


Query: 1   MPRTTKVDCPGCPPLRALTFDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV 60
           MPRTTKVDCPGCPPLRALTFDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV
Sbjct: 1   MPRTTKVDCPGCPPLRALTFDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV 60

Query: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESELA 120
           DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESELA
Sbjct: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESELA 120

Query: 121 SRRCTLLSCTTKGNAIMRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHALF 180
           SRRCTLLSCTTKGNAIMRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHALF
Sbjct: 121 SRRCTLLSCTTKGNAIMRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHALF 180

Query: 181 GGKGVEVNMWNLEQCTKIWTAKAVYFLILLCTFVQSSLHISRVFFDILSKHFDFIQPKKN 240
           GGKGVEVNMWNLEQCTKIWTAKAVYFLILLCTFVQSSLHISRVFFDILSKHFDFIQPKKN
Sbjct: 181 GGKGVEVNMWNLEQCTKIWTAKAVYFLILLCTFVQSSLHISRVFFDILSKHFDFIQPKKN 240

Query: 241 SLGIFTPTWFTSATFLSKDEHRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIKALAE 300
           SLGIFTPTWFTSATFLSKDEHRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIKALAE
Sbjct: 241 SLGIFTPTWFTSATFLSKDEHRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIKALAE 300

Query: 301 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPVIASCGLDSYVR 360
           DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPVIASCGLDSYVR
Sbjct: 301 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPVIASCGLDSYVR 360

Query: 361 FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVEIQQETEVTQTVNEEEHVPQKR 420
           FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVEIQQETEVTQTVNEEEHVPQKR
Sbjct: 361 FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVEIQQETEVTQTVNEEEHVPQKR 420

Query: 421 KKAFKEDGEGGKRKGSKTIDKENKKSRRKSHREIESKQR 460
           KKAFKEDGEGGKRKGSKTIDKENKKSRRKSHREIESKQR
Sbjct: 421 KKAFKEDGEGGKRKGSKTIDKENKKSRRKSHREIESKQR 459

[Close]

BLAST of Carg07590 vs. NCBI nr
Match: KAG6584141.1 (WD repeat-containing protein 74, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 818.5 bits (2113), Expect = 2.8e-233
Identity = 422/459 (91.94%), Postives = 424/459 (92.37%), Query Frame = 0


Query: 1   MPRTTKVDCPGCPPLRALTFDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV 60
           MPRTTKVDCPGCPPLRALTFDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV
Sbjct: 1   MPRTTKVDCPGCPPLRALTFDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV 60

Query: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESELA 120
           DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESELA
Sbjct: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESELA 120

Query: 121 SRRCTLLSCTTKGNAIMRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHALF 180
           SRRCTLLSCTTKGNA MRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHALF
Sbjct: 121 SRRCTLLSCTTKGNASMRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHALF 180

Query: 181 GGKGVEVNMWNLEQCTKIWTAKAVYFLILLCTFVQSSLHISRVFFDILSKHFDFIQPKKN 240
           GGKGVEVNMWNLEQCTKIWTAKA                                 PKKN
Sbjct: 181 GGKGVEVNMWNLEQCTKIWTAKA---------------------------------PKKN 240

Query: 241 SLGIFTPTWFTSATFLSKDEHRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIKALAE 300
           S GIFTPTWFTSATFLSKD+HRKFAAGTNSHQVRLYDISA+KRPVISFDFRETPIKALAE
Sbjct: 241 SHGIFTPTWFTSATFLSKDDHRKFAAGTNSHQVRLYDISARKRPVISFDFRETPIKALAE 300

Query: 301 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPVIASCGLDSYVR 360
           DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPVIASCGLDSYVR
Sbjct: 301 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPVIASCGLDSYVR 360

Query: 361 FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVEIQQETEVTQTVNEEEHVPQKR 420
           FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVEIQQETEVTQTVNEEEHVPQKR
Sbjct: 361 FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVEIQQETEVTQTVNEEEHVPQKR 420

Query: 421 KKAFKEDGEGGKRKGSKTIDKENKKSRRKSHREIESKQR 460
           KKAFKEDGEGGKRKGSKTIDKENKKSRRKSHREIESKQR
Sbjct: 421 KKAFKEDGEGGKRKGSKTIDKENKKSRRKSHREIESKQR 426

[Close]

BLAST of Carg07590 vs. NCBI nr
Match: XP_022923633.1 (WD repeat-containing protein 74-like [Cucurbita moschata])

HSP 1 Score: 814.7 bits (2103), Expect = 4.1e-232
Identity = 421/459 (91.72%), Postives = 422/459 (91.94%), Query Frame = 0


Query: 1   MPRTTKVDCPGCPPLRALTFDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV 60
           MPRTTKVDCPGCPPLRAL FDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV
Sbjct: 1   MPRTTKVDCPGCPPLRALMFDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV 60

Query: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESELA 120
           DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESELA
Sbjct: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESELA 120

Query: 121 SRRCTLLSCTTKGNAIMRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHALF 180
           SRRCTLLSCTTKGNA MRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHALF
Sbjct: 121 SRRCTLLSCTTKGNASMRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHALF 180

Query: 181 GGKGVEVNMWNLEQCTKIWTAKAVYFLILLCTFVQSSLHISRVFFDILSKHFDFIQPKKN 240
           GGKGVEVNMWNLEQCTKIWTAKA                                 PKKN
Sbjct: 181 GGKGVEVNMWNLEQCTKIWTAKA---------------------------------PKKN 240

Query: 241 SLGIFTPTWFTSATFLSKDEHRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIKALAE 300
           SLGIFTPTWFTSATFLSKD+HRKFAAGTNSHQVRLYDISAQKRPVISFDF ETPIKALAE
Sbjct: 241 SLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQVRLYDISAQKRPVISFDFGETPIKALAE 300

Query: 301 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPVIASCGLDSYVR 360
           DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEF VIASCGLDSYVR
Sbjct: 301 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFSVIASCGLDSYVR 360

Query: 361 FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVEIQQETEVTQTVNEEEHVPQKR 420
           FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVEIQQETEVTQTVNEEEHVPQKR
Sbjct: 361 FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVEIQQETEVTQTVNEEEHVPQKR 420

Query: 421 KKAFKEDGEGGKRKGSKTIDKENKKSRRKSHREIESKQR 460
           KKAFKEDGEGGKRKGSKTIDKENKKSRRKSHREIESKQR
Sbjct: 421 KKAFKEDGEGGKRKGSKTIDKENKKSRRKSHREIESKQR 426

[Close]

BLAST of Carg07590 vs. NCBI nr
Match: XP_023520037.1 (WD repeat-containing protein 74-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 797.3 bits (2058), Expect = 6.7e-227
Identity = 410/459 (89.32%), Postives = 418/459 (91.07%), Query Frame = 0


Query: 1   MPRTTKVDCPGCPPLRALTFDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV 60
           MPRTTKVDCPGCP LRALTFDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV
Sbjct: 1   MPRTTKVDCPGCPRLRALTFDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV 60

Query: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESELA 120
           DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDN DTSPPPKDEAIVGMHL SKDESELA
Sbjct: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNADTSPPPKDEAIVGMHLFSKDESELA 120

Query: 121 SRRCTLLSCTTKGNAIMRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHALF 180
           SRRCTLLSCTTKGNA MR+IEFSSSSSEDTSTNL Q+WKICSSG+VMCSKVDGSETHALF
Sbjct: 121 SRRCTLLSCTTKGNASMRSIEFSSSSSEDTSTNLVQSWKICSSGNVMCSKVDGSETHALF 180

Query: 181 GGKGVEVNMWNLEQCTKIWTAKAVYFLILLCTFVQSSLHISRVFFDILSKHFDFIQPKKN 240
           GGKGVEVNMWNLEQCTKIWTAKA                                 PKKN
Sbjct: 181 GGKGVEVNMWNLEQCTKIWTAKA---------------------------------PKKN 240

Query: 241 SLGIFTPTWFTSATFLSKDEHRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIKALAE 300
           SLGIFTPTWFTSATFLSKD+HRKFAAGT+SHQVRLYDISAQKRPVISFDFRETPIKALAE
Sbjct: 241 SLGIFTPTWFTSATFLSKDDHRKFAAGTSSHQVRLYDISAQKRPVISFDFRETPIKALAE 300

Query: 301 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPVIASCGLDSYVR 360
           DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPVIASCGLDSYVR
Sbjct: 301 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPVIASCGLDSYVR 360

Query: 361 FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVEIQQETEVTQTVNEEEHVPQKR 420
           FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVEIQQETEVTQTVNEEE+VPQKR
Sbjct: 361 FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVEIQQETEVTQTVNEEEYVPQKR 420

Query: 421 KKAFKEDGEGGKRKGSKTIDKENKKSRRKSHREIESKQR 460
           KK FKEDGEGGKRKGSK +DKENKKSRRKSHR+ ESKQR
Sbjct: 421 KKTFKEDGEGGKRKGSKAMDKENKKSRRKSHRDTESKQR 426

[Close]

BLAST of Carg07590 vs. NCBI nr
Match: KGN64392.1 (hypothetical protein Csa_013665 [Cucumis sativus])

HSP 1 Score: 748.4 bits (1931), Expect = 3.6e-212
Identity = 383/460 (83.26%), Postives = 405/460 (88.04%), Query Frame = 0


Query: 1   MPRTTKVDCPGCPPLRALTFDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV 60
           MPRTT +DCPGCPPLRALTFDVLGL+KVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV
Sbjct: 1   MPRTTTLDCPGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV 60

Query: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESELA 120
           DRKFDPLLAVARKNGLIEVLNPLNGNLH+AISDNTDTSPPPKDEAIVGMHL SK+E E+ 
Sbjct: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHIAISDNTDTSPPPKDEAIVGMHLFSKEELEVE 120

Query: 121 SRRCTLLSCTTKGNAIMRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHALF 180
           SRRCTLLSCTTKGNA MR+I FSSS S+D ST+L +TWK+C SGDV C+KVDGSETHALF
Sbjct: 121 SRRCTLLSCTTKGNASMRSIGFSSSLSKDASTDLVKTWKVCGSGDVTCTKVDGSETHALF 180

Query: 181 GGKGVEVNMWNLEQCTKIWTAKAVYFLILLCTFVQSSLHISRVFFDILSKHFDFIQPKKN 240
           GGKGVEVNMWNLEQCTKIWTAKA                                 PKKN
Sbjct: 181 GGKGVEVNMWNLEQCTKIWTAKA---------------------------------PKKN 240

Query: 241 SLGIFTPTWFTSATFLSKDEHRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIKALAE 300
           +LGIFTPTWFTSATFLSKD+HRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIK+LAE
Sbjct: 241 NLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIKSLAE 300

Query: 301 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPVIASCGLDSYVR 360
           DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPE PVIASCGLDSYVR
Sbjct: 301 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPELPVIASCGLDSYVR 360

Query: 361 FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVE-IQQETEVTQTVNEEEHVPQK 420
           FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVT +AVE IQQETE  QTV+EEEH+P+K
Sbjct: 361 FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTQTAVESIQQETEAAQTVSEEEHMPRK 420

Query: 421 RKKAFKEDGEGGKRKGSKTIDKENKKSRRKSHREIESKQR 460
           RKK+ KE GEGGKRKG+KT DKE+KKSRRKSH E E KQ+
Sbjct: 421 RKKSSKEGGEGGKRKGNKTTDKESKKSRRKSHGETERKQK 427

[Close]

BLAST of Carg07590 vs. ExPASy Swiss-Prot
Match: Q58D06 (WD repeat-containing protein 74 OS=Bos taurus OX=9913 GN=WDR74 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 7.9e-21
Identity = 60/153 (39.22%), Postives = 83/153 (54.25%), Query Frame = 0


Query: 242 LGIFTPTWFTSATFLSKDEHRKFAAGTNSHQVRLYD-ISAQKRPVISFDFRETPIKALAE 301
           L +  P W     FL   E +K    T  HQVR+YD  S Q+RPV+   + E P+ A+  
Sbjct: 178 LDLRVPVWDQDIQFL--PESQKLVTCTGYHQVRVYDPASPQRRPVLEATYGEYPLTAVTL 237

Query: 302 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPVIASCGLDSYVR 361
             +GN++ VGN  G LA  D+R G+LLGC  G  +GS+R +  HP  P++ASCGLD  +R
Sbjct: 238 TPEGNSVIVGNTHGQLAEIDLRQGRLLGCLKG-LAGSVRGLQCHPSKPLLASCGLDRVLR 297

Query: 362 FWDIKT-RQLLSAVFLKQHLTGVVFDSHFVEED 393
              I+  R L   V+LK  L  ++       ED
Sbjct: 298 IHRIRNPRGLEHKVYLKSQLNCLLLSGRDNWED 327

[Close]

BLAST of Carg07590 vs. ExPASy Swiss-Prot
Match: Q8VCG3 (WD repeat-containing protein 74 OS=Mus musculus OX=10090 GN=Wdr74 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 3.0e-20
Identity = 64/174 (36.78%), Postives = 90/174 (51.72%), Query Frame = 0


Query: 242 LGIFTPTWFTSATFLSKDEHRKFAAGTNSHQVRLYD-ISAQKRPVISFDFRETPIKALAE 301
           L +  P W     FL   +  K    T  HQVR+YD +S Q+RPV+   + E P+ A+  
Sbjct: 178 LDLRVPIWDQDTQFLPGSQ--KLVTCTGYHQVRVYDPVSPQRRPVLEATYGEYPLTAMTL 237

Query: 302 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPVIASCGLDSYVR 361
             +GN++ VGN  G LA  D R G+LLGC  G  +GS+R +  HP  P++ASCGLD  +R
Sbjct: 238 TPEGNSVIVGNTHGQLAEIDFRQGRLLGCLKG-LAGSVRGLQCHPSKPLLASCGLDRVLR 297

Query: 362 FWDIKT-RQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVEIQQETEVTQTVNEE 414
              I+  R L   V+LK  L  ++       ED      E Q+  E  Q  +E+
Sbjct: 298 IHRIRNPRGLEHKVYLKSQLNCLLLSGRDNWED------EPQEPQEPNQVPSED 342

[Close]

BLAST of Carg07590 vs. ExPASy Swiss-Prot
Match: Q6RFH5 (WD repeat-containing protein 74 OS=Homo sapiens OX=9606 GN=WDR74 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 2.0e-16
Identity = 69/208 (33.17%), Postives = 99/208 (47.60%), Query Frame = 0


Query: 242 LGIFTPTWFTSATFLSKDEHRKFAAGTNSHQVRLYD-ISAQKRPVISFDFRETPIKALAE 301
           L +  P W     FL   +  K    T  HQVR+YD  S Q+RPV+   + E P+ A+  
Sbjct: 178 LDLRVPIWDQDIQFLPGSQ--KLVTCTGYHQVRVYDPASPQRRPVLETTYGEYPLTAMTL 237

Query: 302 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPVIASCGLDSYVR 361
              GN++ VGN  G LA  D+R G+LLGC  G  +GS+R +  HP  P++ASCGLD  +R
Sbjct: 238 TPGGNSVIVGNTHGQLAEIDLRQGRLLGCLKG-LAGSVRGLQCHPSKPLLASCGLDRVLR 297

Query: 362 FWDIKT-RQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVEIQQETEVTQTVNEEEHVPQK 421
              I+  R L   V+LK  L  ++       ED      E Q+  +V     E + +   
Sbjct: 298 IHRIQNPRGLEHKVYLKSQLNCLLLSGRDNWED---EPQEPQEPNKVPLEDTETDELWAS 357

Query: 422 RKKAFKEDGEGGKRKGSKTIDKENKKSR 448
            + A K    G ++       +  KK R
Sbjct: 358 LEAAAKRKLSGLEQPQGALQTRRRKKKR 379

[Close]

BLAST of Carg07590 vs. ExPASy Swiss-Prot
Match: Q54FW9 (WD repeat-containing protein DDB_G0290555 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290555 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 6.7e-12
Identity = 86/372 (23.12%), Postives = 169/372 (45.43%), Query Frame = 0


Query: 77  IEVLNPLNGN-LHVAISD-----NTDTSPPPKDEAIVGMHLLSKDESELASRRCTLLSCT 136
           I+ ++PLN + L VA+ +      T T+P     A + +  L+K +S  A+   + +   
Sbjct: 81  IKAIHPLNNDKLLVALENGLVDVKTLTAPITTQLAPMNLPTLNKKKSPAAAAAASTVGKN 140

Query: 137 TKGNAIMRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHALFGGKGVEVNMW 196
            K   ++     + S S + +TNL        SG  M    + S     FGGK V + +W
Sbjct: 141 NKSKQVIVEPVNTQSFSLNVATNL--------SGFAM----NPSNDKFAFGGKDVNLTIW 200

Query: 197 NLEQCTKIWTAKAVYFLILLCTFVQSSLHISRVFFDILSKHFDFIQPKKNSLGIFTPTWF 256
           +LE+  K ++AK                                   K + L +  P   
Sbjct: 201 DLEKQVKTYSAKF----------------------------------KHDFLNLQEPVSI 260

Query: 257 TSATFLSKDEHRKFAAGTNSHQVRLYDISAQ--KRPVISFDFRETPIKALA-EDVDGNTI 316
               +++ D   K   G++  +++ YD+ ++  +   +   F + PI+++   +   +  
Sbjct: 261 NVVKYMNDD---KILIGSD-FRIKAYDLRSKTNRSSFLDVSFSKHPIQSIQYTNQKEHYF 320

Query: 317 FVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPVIASCGLDSYVRFWDIKTR 376
           +  ++ G +  +D+R  + +G F    +GS++ IA HP  P++A+ GLD ++R +++  R
Sbjct: 321 YASDSIGKVFCYDVRTSRQVGSFKDS-AGSVKDIAIHPTLPLLATVGLDRHLRVYNLDNR 380

Query: 377 QLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVEIQQETEVTQTVNEEEHVPQKRKKAFKED 436
           ++L  +FLKQ L+ V+F     +E+ T+     Q+E E+ +  N EE+  +       ++
Sbjct: 381 KMLHKIFLKQRLSCVLFS----KEEPTNEIA--QEEEEIWK--NLEENKNRINNDDNDDN 393

Query: 437 GEGGKRKGSKTI 440
            EG  +K S +I
Sbjct: 441 NEGNDKKKSISI 393

[Close]

BLAST of Carg07590 vs. ExPASy Swiss-Prot
Match: Q6BUJ2 (Ribosome biogenesis protein NSA1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=NSA1 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.2e-06
Identity = 64/268 (23.88%), Postives = 117/268 (43.66%), Query Frame = 0


Query: 220 ISRVFFDILSKHFDFIQP---------KKNSLGIFTPTWFTSATFLSK--DEHRKFAAGT 279
           I++  F+  +K  +F QP         K + L +  P W +S  F  +   +  KF   T
Sbjct: 174 ITKDVFEAENKQ-EFFQPDVIFTARNVKNDHLDLRPPIWISSILFFEEKPKDGYKFLTST 233

Query: 280 NSHQVRLYDISAQKRPVISFDFRETPIKALAEDVDGNTIFVGNASGDLASFDIRN----- 339
              QVR+YD +  KRP+  +   E PI  L        + V +    +A + +       
Sbjct: 234 RYGQVRIYDTTHGKRPIQDYKVCEKPIVTLNFADSEEEVIVSDTHNLVAKYSLAQIDSKA 293

Query: 340 ---------------GKLLGCF-LGKCSGSIRSIARHPEFPVIASCGLDSYVRFWDIKTR 399
                           KLLG F  G  +G+I  +    +  +I++ GLD Y+R +DI +R
Sbjct: 294 FKTHSASAGEITKPVSKLLGKFSAGGNTGAIVGVNIFDD-EIISTGGLDRYLRTYDISSR 353

Query: 400 QLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVEIQQETEVTQTVNEEEHVPQKRKKAFK-E 455
           ++L+ V+L   ++ V+         +  S  E ++E E       ++++ ++R+KA + E
Sbjct: 354 EILAKVYLGVQISDVL---------MLDSEDEEEEEPESEMGDKRKKNIEKRRRKALEAE 413

[Close]

BLAST of Carg07590 vs. ExPASy TrEMBL
Match: A0A6J1EA63 (WD repeat-containing protein 74-like OS=Cucurbita moschata OX=3662 GN=LOC111431283 PE=4 SV=1)

HSP 1 Score: 814.7 bits (2103), Expect = 2.0e-232
Identity = 421/459 (91.72%), Postives = 422/459 (91.94%), Query Frame = 0


Query: 1   MPRTTKVDCPGCPPLRALTFDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV 60
           MPRTTKVDCPGCPPLRAL FDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV
Sbjct: 1   MPRTTKVDCPGCPPLRALMFDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV 60

Query: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESELA 120
           DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESELA
Sbjct: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESELA 120

Query: 121 SRRCTLLSCTTKGNAIMRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHALF 180
           SRRCTLLSCTTKGNA MRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHALF
Sbjct: 121 SRRCTLLSCTTKGNASMRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHALF 180

Query: 181 GGKGVEVNMWNLEQCTKIWTAKAVYFLILLCTFVQSSLHISRVFFDILSKHFDFIQPKKN 240
           GGKGVEVNMWNLEQCTKIWTAKA                                 PKKN
Sbjct: 181 GGKGVEVNMWNLEQCTKIWTAKA---------------------------------PKKN 240

Query: 241 SLGIFTPTWFTSATFLSKDEHRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIKALAE 300
           SLGIFTPTWFTSATFLSKD+HRKFAAGTNSHQVRLYDISAQKRPVISFDF ETPIKALAE
Sbjct: 241 SLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQVRLYDISAQKRPVISFDFGETPIKALAE 300

Query: 301 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPVIASCGLDSYVR 360
           DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEF VIASCGLDSYVR
Sbjct: 301 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFSVIASCGLDSYVR 360

Query: 361 FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVEIQQETEVTQTVNEEEHVPQKR 420
           FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVEIQQETEVTQTVNEEEHVPQKR
Sbjct: 361 FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVEIQQETEVTQTVNEEEHVPQKR 420

Query: 421 KKAFKEDGEGGKRKGSKTIDKENKKSRRKSHREIESKQR 460
           KKAFKEDGEGGKRKGSKTIDKENKKSRRKSHREIESKQR
Sbjct: 421 KKAFKEDGEGGKRKGSKTIDKENKKSRRKSHREIESKQR 426

[Close]

BLAST of Carg07590 vs. ExPASy TrEMBL
Match: A0A0A0LUB9 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050310 PE=4 SV=1)

HSP 1 Score: 748.4 bits (1931), Expect = 1.7e-212
Identity = 383/460 (83.26%), Postives = 405/460 (88.04%), Query Frame = 0


Query: 1   MPRTTKVDCPGCPPLRALTFDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV 60
           MPRTT +DCPGCPPLRALTFDVLGL+KVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV
Sbjct: 1   MPRTTTLDCPGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV 60

Query: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESELA 120
           DRKFDPLLAVARKNGLIEVLNPLNGNLH+AISDNTDTSPPPKDEAIVGMHL SK+E E+ 
Sbjct: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHIAISDNTDTSPPPKDEAIVGMHLFSKEELEVE 120

Query: 121 SRRCTLLSCTTKGNAIMRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHALF 180
           SRRCTLLSCTTKGNA MR+I FSSS S+D ST+L +TWK+C SGDV C+KVDGSETHALF
Sbjct: 121 SRRCTLLSCTTKGNASMRSIGFSSSLSKDASTDLVKTWKVCGSGDVTCTKVDGSETHALF 180

Query: 181 GGKGVEVNMWNLEQCTKIWTAKAVYFLILLCTFVQSSLHISRVFFDILSKHFDFIQPKKN 240
           GGKGVEVNMWNLEQCTKIWTAKA                                 PKKN
Sbjct: 181 GGKGVEVNMWNLEQCTKIWTAKA---------------------------------PKKN 240

Query: 241 SLGIFTPTWFTSATFLSKDEHRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIKALAE 300
           +LGIFTPTWFTSATFLSKD+HRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIK+LAE
Sbjct: 241 NLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIKSLAE 300

Query: 301 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPVIASCGLDSYVR 360
           DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPE PVIASCGLDSYVR
Sbjct: 301 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPELPVIASCGLDSYVR 360

Query: 361 FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVE-IQQETEVTQTVNEEEHVPQK 420
           FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVT +AVE IQQETE  QTV+EEEH+P+K
Sbjct: 361 FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTQTAVESIQQETEAAQTVSEEEHMPRK 420

Query: 421 RKKAFKEDGEGGKRKGSKTIDKENKKSRRKSHREIESKQR 460
           RKK+ KE GEGGKRKG+KT DKE+KKSRRKSH E E KQ+
Sbjct: 421 RKKSSKEGGEGGKRKGNKTTDKESKKSRRKSHGETERKQK 427

[Close]

BLAST of Carg07590 vs. ExPASy TrEMBL
Match: A0A5D3BIZ1 (WD repeat-containing protein 74 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004540 PE=4 SV=1)

HSP 1 Score: 740.3 bits (1910), Expect = 4.7e-210
Identity = 378/450 (84.00%), Postives = 396/450 (88.00%), Query Frame = 0


Query: 1   MPRTTKVDCPGCPPLRALTFDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV 60
           MPRTT +DCPGCPPLRALTFDVLGL+KVIEARGKEGEIPKVVERWGEPDFSKSVLAASL 
Sbjct: 1   MPRTTTLDCPGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLA 60

Query: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESELA 120
           DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHL SKDE E+ 
Sbjct: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLFSKDELEVE 120

Query: 121 SRRCTLLSCTTKGNAIMRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHALF 180
           SRRCTLLSCTTKGNA MR+IEFSSSSS D STNL +TWK+C SGDVMCSKVDGSETHALF
Sbjct: 121 SRRCTLLSCTTKGNASMRSIEFSSSSSRDASTNLVKTWKVCGSGDVMCSKVDGSETHALF 180

Query: 181 GGKGVEVNMWNLEQCTKIWTAKAVYFLILLCTFVQSSLHISRVFFDILSKHFDFIQPKKN 240
           GGKGVEVNMWNLEQCTKIWTAKA                                 PKKN
Sbjct: 181 GGKGVEVNMWNLEQCTKIWTAKA---------------------------------PKKN 240

Query: 241 SLGIFTPTWFTSATFLSKDEHRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIKALAE 300
           +LGIFTPTWFTSATFLSKD+HRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIK+LAE
Sbjct: 241 NLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIKSLAE 300

Query: 301 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPVIASCGLDSYVR 360
           DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPE PVIASCGLDSYVR
Sbjct: 301 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPELPVIASCGLDSYVR 360

Query: 361 FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVE-IQQETEVTQTVNEEEHVPQK 420
           FWDI TRQLLSAVFLKQHLTGVVFDSHFV EDVT +AVE IQQETE  QTV+EEEHVP+K
Sbjct: 361 FWDINTRQLLSAVFLKQHLTGVVFDSHFVGEDVTQTAVELIQQETEAAQTVSEEEHVPRK 417

Query: 421 RKKAFKEDGEGGKRKGSKTIDKENKKSRRK 450
           RKK+ KEDGEG KRKGSKT +KE+KK +++
Sbjct: 421 RKKSSKEDGEGRKRKGSKTTNKESKKKQKE 417

[Close]

BLAST of Carg07590 vs. ExPASy TrEMBL
Match: E5GBV4 (WD-repeat protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 740.3 bits (1910), Expect = 4.7e-210
Identity = 378/450 (84.00%), Postives = 396/450 (88.00%), Query Frame = 0


Query: 1   MPRTTKVDCPGCPPLRALTFDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV 60
           MPRTT +DCPGCPPLRALTFDVLGL+KVIEARGKEGEIPKVVERWGEPDFSKSVLAASL 
Sbjct: 1   MPRTTTLDCPGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLA 60

Query: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESELA 120
           DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHL SKDE E+ 
Sbjct: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLFSKDELEVE 120

Query: 121 SRRCTLLSCTTKGNAIMRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHALF 180
           SRRCTLLSCTTKGNA MR+IEFSSSSS D STNL +TWK+C SGDVMCSKVDGSETHALF
Sbjct: 121 SRRCTLLSCTTKGNASMRSIEFSSSSSRDASTNLVKTWKVCGSGDVMCSKVDGSETHALF 180

Query: 181 GGKGVEVNMWNLEQCTKIWTAKAVYFLILLCTFVQSSLHISRVFFDILSKHFDFIQPKKN 240
           GGKGVEVNMWNLEQCTKIWTAKA                                 PKKN
Sbjct: 181 GGKGVEVNMWNLEQCTKIWTAKA---------------------------------PKKN 240

Query: 241 SLGIFTPTWFTSATFLSKDEHRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIKALAE 300
           +LGIFTPTWFTSATFLSKD+HRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIK+LAE
Sbjct: 241 NLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIKSLAE 300

Query: 301 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPVIASCGLDSYVR 360
           DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPE PVIASCGLDSYVR
Sbjct: 301 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPELPVIASCGLDSYVR 360

Query: 361 FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVE-IQQETEVTQTVNEEEHVPQK 420
           FWDI TRQLLSAVFLKQHLTGVVFDSHFV EDVT +AVE IQQETE  QTV+EEEHVP+K
Sbjct: 361 FWDINTRQLLSAVFLKQHLTGVVFDSHFVGEDVTQTAVELIQQETEAAQTVSEEEHVPRK 417

Query: 421 RKKAFKEDGEGGKRKGSKTIDKENKKSRRK 450
           RKK+ KEDGEG KRKGSKT +KE+KK +++
Sbjct: 421 RKKSSKEDGEGRKRKGSKTTNKESKKKQKE 417

[Close]

BLAST of Carg07590 vs. ExPASy TrEMBL
Match: A0A1S3AYE7 (WD repeat-containing protein 74 OS=Cucumis melo OX=3656 GN=LOC103484256 PE=4 SV=1)

HSP 1 Score: 740.3 bits (1910), Expect = 4.7e-210
Identity = 378/450 (84.00%), Postives = 396/450 (88.00%), Query Frame = 0


Query: 1   MPRTTKVDCPGCPPLRALTFDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV 60
           MPRTT +DCPGCPPLRALTFDVLGL+KVIEARGKEGEIPKVVERWGEPDFSKSVLAASL 
Sbjct: 1   MPRTTTLDCPGCPPLRALTFDVLGLVKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLA 60

Query: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESELA 120
           DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHL SKDE E+ 
Sbjct: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLFSKDELEVE 120

Query: 121 SRRCTLLSCTTKGNAIMRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHALF 180
           SRRCTLLSCTTKGNA MR+IEFSSSSS D STNL +TWK+C SGDVMCSKVDGSETHALF
Sbjct: 121 SRRCTLLSCTTKGNASMRSIEFSSSSSRDASTNLVKTWKVCGSGDVMCSKVDGSETHALF 180

Query: 181 GGKGVEVNMWNLEQCTKIWTAKAVYFLILLCTFVQSSLHISRVFFDILSKHFDFIQPKKN 240
           GGKGVEVNMWNLEQCTKIWTAKA                                 PKKN
Sbjct: 181 GGKGVEVNMWNLEQCTKIWTAKA---------------------------------PKKN 240

Query: 241 SLGIFTPTWFTSATFLSKDEHRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIKALAE 300
           +LGIFTPTWFTSATFLSKD+HRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIK+LAE
Sbjct: 241 NLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIKSLAE 300

Query: 301 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPVIASCGLDSYVR 360
           DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPE PVIASCGLDSYVR
Sbjct: 301 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPELPVIASCGLDSYVR 360

Query: 361 FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVE-IQQETEVTQTVNEEEHVPQK 420
           FWDI TRQLLSAVFLKQHLTGVVFDSHFV EDVT +AVE IQQETE  QTV+EEEHVP+K
Sbjct: 361 FWDINTRQLLSAVFLKQHLTGVVFDSHFVGEDVTQTAVELIQQETEAAQTVSEEEHVPRK 417

Query: 421 RKKAFKEDGEGGKRKGSKTIDKENKKSRRK 450
           RKK+ KEDGEG KRKGSKT +KE+KK +++
Sbjct: 421 RKKSSKEDGEGRKRKGSKTTNKESKKKQKE 417

[Close]

BLAST of Carg07590 vs. TAIR 10
Match: AT1G29320.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 453.0 bits (1164), Expect = 2.9e-127
Identity = 251/469 (53.52%), Postives = 305/469 (65.03%), Query Frame = 0


Query: 1   MPRTTKVDCPGCPPLRALTFDVLGLIKVIEARGKEGEIPKVVERWGEPDFSKSVLAASLV 60
           MPR    +  GCPP RALTFD LGLIKV EARG+E  IP VV  WGE + S+SVLAAS+ 
Sbjct: 1   MPRVIPPENLGCPPFRALTFDSLGLIKVTEARGQERGIPTVVNTWGEMNASRSVLAASID 60

Query: 61  DRKFDPLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESELA 120
           DR  +PLLAVARK+G +EV+NP NG+LH + S   D    P+D  I  +HL  K   +  
Sbjct: 61  DRLRNPLLAVARKDGNVEVINPCNGDLHFSYSVFGDDGCSPEDNEISALHLFRKKIDDQT 120

Query: 121 SRRCTLLSCTTKGNAIMRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHALF 180
            R CTLL+CT KG+  +R+++F  +    T     +TWK C SG+++  KVDGSE  +LF
Sbjct: 121 ERSCTLLTCTKKGDVSLRSVKFPDAHGNSTDDASPKTWKACGSGEILVGKVDGSENFSLF 180

Query: 181 GGKGVEVNMWNLEQCTKIWTAKAVYFLILLCTFVQSSLHISRVFFDILSKHFDFIQPKKN 240
           GGK VE N+W+LEQCTKIW+AK                                  P KN
Sbjct: 181 GGKRVEANIWDLEQCTKIWSAKC---------------------------------PPKN 240

Query: 241 SLGIFTPTWFTSATFLSKDEHRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIKALAE 300
           +LGIFTPTWFTSATFLSKD+HRKF  GT SHQVRLYDIS Q+RPV+SFDFRET I ++AE
Sbjct: 241 NLGIFTPTWFTSATFLSKDDHRKFVTGTKSHQVRLYDISTQRRPVLSFDFRETAITSIAE 300

Query: 301 DVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPVIASCGLDSYVR 360
           D DG+TI+VGNAS DLASFDIR GKLLG FLGKCSGSIRS+ RHP+  VIASCGLD Y+R
Sbjct: 301 DPDGHTIYVGNASADLASFDIRTGKLLGSFLGKCSGSIRSVVRHPQHQVIASCGLDRYLR 360

Query: 361 FWDIKTRQLLSAVFLKQHLTGVVFDSHFVEED--VTHSAVEIQQETEVT---QTVNEEEH 420
            +D+KTRQL+SAVFLKQHLTG+VFDS F  E+  V ++  E   E ++T   Q  +E E 
Sbjct: 361 VYDVKTRQLISAVFLKQHLTGLVFDSGFSGEETAVANTVAEAATEEKMTIMDQEDDETEK 420

Query: 421 VPQKRKKAFK-----------EDGEGGKRKGSKTIDKENKKSRRKSHRE 454
            P KRKK+ K           ED E  + +  K   K  K  + K  RE
Sbjct: 421 APVKRKKSKKEKRSREIVFEGEDDEENEDEIEKAPVKTKKSKKEKRSRE 436

[Close]

BLAST of Carg07590 vs. TAIR 10
Match: AT4G15900.1 (pleiotropic regulatory locus 1 )

HSP 1 Score: 44.7 bits (104), Expect = 2.4e-04
Identity = 29/125 (23.20%), Postives = 55/125 (44.00%), Query Frame = 0


Query: 249 WFTSATFLSKDEHRKFAAGTNSHQVRLYDISAQKRPVISFDFRETPIKALAEDVDGNTIF 308
           W  S  F   +E   F  G+    ++++D++     +      E  ++ LA       +F
Sbjct: 178 WVRSVAFDPSNEW--FCTGSADRTIKIWDVATGVLKLTLTGHIE-QVRGLAVSNRHTYMF 237

Query: 309 VGNASGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPVIASCGLDSYVRFWDIKTRQ 368
                  +  +D+   K++  + G  SG +  +A HP   V+ + G DS  R WDI+T+ 
Sbjct: 238 SAGDDKQVKCWDLEQNKVIRSYHGHLSG-VYCLALHPTLDVLLTGGRDSVCRVWDIRTKM 297

Query: 369 LLSAV 374
            + A+
Sbjct: 298 QIFAL 298

The following BLAST results are available for this feature:

BLAST of Carg07590 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7019732.1	1.8e-259	100.00	WD repeat-containing protein 74, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
KAG6584141.1	2.8e-233	91.94	WD repeat-containing protein 74, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022923633.1	4.1e-232	91.72	WD repeat-containing protein 74-like [Cucurbita moschata]	[more]
XP_023520037.1	6.7e-227	89.32	WD repeat-containing protein 74-like [Cucurbita pepo subsp. pepo]	[more]
KGN64392.1	3.6e-212	83.26	hypothetical protein Csa_013665 [Cucumis sativus]	[more]

BLAST of Carg07590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q58D06	7.9e-21	39.22	WD repeat-containing protein 74 OS=Bos taurus OX=9913 GN=WDR74 PE=2 SV=1	[more]
Q8VCG3	3.0e-20	36.78	WD repeat-containing protein 74 OS=Mus musculus OX=10090 GN=Wdr74 PE=2 SV=1	[more]
Q6RFH5	2.0e-16	33.17	WD repeat-containing protein 74 OS=Homo sapiens OX=9606 GN=WDR74 PE=1 SV=1	[more]
Q54FW9	6.7e-12	23.12	WD repeat-containing protein DDB_G0290555 OS=Dictyostelium discoideum OX=44689 G...	[more]
Q6BUJ2	4.2e-06	23.88	Ribosome biogenesis protein NSA1 OS=Debaryomyces hansenii (strain ATCC 36239 / C...	[more]

BLAST of Carg07590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EA63	2.0e-232	91.72	WD repeat-containing protein 74-like OS=Cucurbita moschata OX=3662 GN=LOC1114312...	[more]
A0A0A0LUB9	1.7e-212	83.26	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G...	[more]
A0A5D3BIZ1	4.7e-210	84.00	WD repeat-containing protein 74 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
E5GBV4	4.7e-210	84.00	WD-repeat protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3AYE7	4.7e-210	84.00	WD repeat-containing protein 74 OS=Cucumis melo OX=3656 GN=LOC103484256 PE=4 SV=...	[more]

BLAST of Carg07590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29320.1	2.9e-127	53.52	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G15900.1	2.4e-04	23.20	pleiotropic regulatory locus 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 323..363 e-value: 0.011 score: 25.0 coord: 238..277 e-value: 70.0 score: 5.4
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 331..372 score: 10.040596
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 42..416 e-value: 1.5E-21 score: 78.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 406..459
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 408..459
None	No IPR available	PANTHER	PTHR16038:SF5	BNAANNG21410D PROTEIN	coord: 1..203
None	No IPR available	PANTHER	PTHR16038:SF5	BNAANNG21410D PROTEIN	coord: 235..432
IPR037379	WDR74/Nsa1	PANTHER	PTHR16038	NOP SEVEN ASSOCIATED PROTEIN 1	coord: 1..203 coord: 235..432
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 350..364
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 60..387

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07590-RA	Carg07590-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042273	ribosomal large subunit biogenesis
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030687	preribosome, large subunit precursor
molecular_function	GO:0005515	protein binding