Carg07489 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAGCACAAGGCATTTGAGTAGTGAAAAGTTTGGAGGTCTGGTAAATTTGTTAAGCTCAAAATTCCATTTTCATGGAGCAACCTCCATTCATTTCTCACCGGCGAGACGAACCGGAGTTCAGCCTCCGTGAATGGGCGGCAAAGGCTAAAATTGGCCGCGACCCCGCCATTTCCAGGCGATTCTCCGGGTCCTACATCAGAAGCTTTCGAGAAGACGCGAGGTCGTTTCGATCAAATGTCACCACCGTCACTAGCACCGCCTCCTCTCCTGGATACCCTTTCGGAGGTTTTTGTTTTCTTTTTCTCTCTGTGGAGTTTTGATTCTTGCTATGGATTCCTCTGTTCTTTAACTTATCTGGGGTCTGTTTGCAGACGAAATTGACCCTGCTACTTATTCGTTCACTAATGCTATCAAGGGTGAGTTTTGAATTCGGATTCTACTTTGCCTACAAGGTGTTCTTGAAAATGCGTGTTCTGGAATTGGGAGTTTTGAGGTTGTTTTTTGTGATTGGGTGCGGCTTCTTGTGTAGCACTGCAAGCCAGGTCGCTTAACAGTTGGGAATGCTTTTCTCTTGATGGGTTTACGTTGAATTCGAAGTGGAATGAAGCCGAGAAGTATATATGTAATCCACTTTCTGGGGAAGTTCCCATGGAGTGTTTGTCTGCAAAATCGCTTAGTGGGAGGTCATTCAAGAACTTAGCGAACAGAATTACCATATCTGCTCCTTTAGTTTATTCCAATCATTCGCAAATTGGAACAAAGCCATATTCTATTTCACAACTAGTTCAGAAACTCCCAATTCCAGGTCGAATCATCTATGTTCTTCTTTAGAATTTCGAGTTTGATCGAATTTGGGATTGGAAAATTTTGAATTCCTGTTGTGATTTTCAGAGAACAAAGTGGAAGCCAATGGCATGACCAGAGATATGGGAACTCAAAGCACACCAACAGTCGTTGGTTCAAACAGTCCTAGTCCTGCTTCCACGCCTCCTATTGTGGAGAGAGCATTAAAGAGATGCGAATTAGAAGAAGACTCGCCCAATTCCAATTCTAAAAGTACTCCCGAGACAGAGGTATGCCACCTCCAATCTTTCATAGGCTATAATCTTTGTTATATTCGTCTGATGCTTGTAGTTTGATTTCAACAATGTCTAAATGGAAAATTTGAAAGGAGTTCTCAAATTAACCATTGAGAGGATAGTTTATGATTCATATAATGTTTATAAATATAGTTTTAACACACTGATAAGCTCATAAGTTAACACGGCAGCCAAGAAATGAGTTGTTATTGATGTTAATTTTTCAGAATGAGACTTAGTTTTAGTGAACGTTTGAAACAATTTGGCTTGGGATCCCAACATTATGGCCTTTGTTCATAGCTTGAGGAGAAAAGCTTAATGCAAAATTGAACTGTCAGCCTAACCCTCAAAGAATATAATCTACAAGAAGAAACAAGTGGATCATAAGTGAAGTTCAGCTTTCTCTCCAATCTATTTCCCTCCAAGGATGAGCCAACCAAATCAGGGTTGTCACCATACATGTCATGAAACAGAGTGCTATAACCATCCAAGGTGGGGGACTGTTTTTGTTAGCCACAAGTTGTTATGTTTTGGTCCCTTTTTGATACTATTTTTTTCCTCATATTGGCCTACTTTCCAGCCCGTACGGTTGTGATTATCTCTATACCATAGAAACATATTTTTCTAGAAAATAAAGTGATAATATCAGATGTCAGAAAACCCAGCCTTAAGTTTCAGAAGCAAACAGAAAGTTCAATTCTTGGTGTTAGAGAGATTTGTCTCAACACTTGAATTACTGCATAAATTTCAAATTTCCCTCCTTGAAATACGTATCTGTTCGTTTTCGTTCTTCGGTGTCTATTTCATTTTCTTTCCTTCTACCTCAGGGGGGGACCCATCAAAATTCTCCTGTTCATACATATTCCTTTGTTTTTACATCAAGATCTCGAGCTATATTAATATTTCTCATTGAAAATGCTGTTGTAGATCTTCTTTTTTTCATGTATATTCCCTTATGTTGAGGATTGTCGGGAGGTAGTTCCATGATCATGAGTTTATAAGTAAGGAATAAATCTCTATTAATATGTGACCTTTTGGGGAAACCAAAAGCAATGCCACGAGAGCTTATGCTTAAAGAGGTTCCTAACACCTTAGTGGTCCATTAAGCAGCAATAAGGTTATTACCCGAATGAGCATCGAGGCCTTAAAAAGCCTTTTTAGATGACACTGATATAAAGCAACTTTATCTGAATGCAGGTGATAAGGAGAGAATTGAAGGAGGAGAGAGCAAAAGAAGAAGAAAAGGAAGTAGTACATAGAGAAACAATAGCAGAAGAGAAGTTCAAGCAAGGAGGATGCTTGTCATGGATGATGAAGAAGAAGAAGCAGAAAGAAGAAGAGAGATCAAGAAGAAAGAGGTTAATTTGTGATCTAAAACTCAAAGGTTGTTGAAAAACAGTGTGAAAAAGCTAAGAACAAATTGAAAAACATGGAAAAGCAGAGATTTGGATTATGTGTTAATGCAGCAAAATGGAAGAACAGGGGCAGGTGAGAATGTGGGTTGGTATTGGAGATGATGAGAGGGGTGGGTATCATAAAGGATTATGTGTTGTGTTGGTGTTAGTGGTCCTATAAGCATTTGCCTCTCAGCCATTTCAATATCTGTTCTCTGTGGCTTCACGTGCATGCTTTTGTCTTTGTGTTCCTGAATAGTGTAAGGTAAGGGCTCCAAAGGGCCTCCCCTTTTTGTTTTGAACTTTCAAATCTCTCCCTCTCTCGTAGTTATTATTTTGACCTTTGTTGTAGAATTTTTATACTGTGTTTAACAAAAATCAATGTGGATACTACTAGTTAGACTCCTATCTCTACGCCCATATCGAACCACCTTTTTTTGAATTAGAAACTAGATTGGATACCACGTTGTTTAGAATCTAAGTTTTGATGATGCTATAATAAAGTTTATTGTTACGAAGTTGAGAACTGACTTATTGGAAAGATAGGATTAGGTAATTCTACTGGAGAAGGCCATCAACACTCAACTTACCAAAATGTATCGGGAGTAAGTAGTTCAAGGAGCATGGGATAGGT CAAAGCACAAGGCATTTGAGTAGTGAAAAGTTTGGAGGTCTGGTAAATTTGTTAAGCTCAAAATTCCATTTTCATGGAGCAACCTCCATTCATTTCTCACCGGCGAGACGAACCGGAGTTCAGCCTCCGTGAATGGGCGGCAAAGGCTAAAATTGGCCGCGACCCCGCCATTTCCAGGCGATTCTCCGGGTCCTACATCAGAAGCTTTCGAGAAGACGCGAGGTCGTTTCGATCAAATGTCACCACCGTCACTAGCACCGCCTCCTCTCCTGGATACCCTTTCGGAGACGAAATTGACCCTGCTACTTATTCGTTCACTAATGCTATCAAGGCACTGCAAGCCAGGTCGCTTAACAGTTGGGAATGCTTTTCTCTTGATGGGTTTACGTTGAATTCGAAGTGGAATGAAGCCGAGAAGTATATATGTAATCCACTTTCTGGGGAAGTTCCCATGGAGTGTTTGTCTGCAAAATCGCTTAGTGGGAGGTCATTCAAGAACTTAGCGAACAGAATTACCATATCTGCTCCTTTAGTTTATTCCAATCATTCGCAAATTGGAACAAAGCCATATTCTATTTCACAACTAGTTCAGAAACTCCCAATTCCAGAGAACAAAGTGGAAGCCAATGGCATGACCAGAGATATGGGAACTCAAAGCACACCAACAGTCGTTGGTTCAAACAGTCCTAGTCCTGCTTCCACGCCTCCTATTGTGGAGAGAGCATTAAAGAGATGCGAATTAGAAGAAGACTCGCCCAATTCCAATTCTAAAAGTACTCCCGAGACAGAGGTGATAAGGAGAGAATTGAAGGAGGAGAGAGCAAAAGAAGAAGAAAAGGAAGTAGTACATAGAGAAACAATAGCAGAAGAGAAGTTCAAGCAAGGAGGATGCTTGTCATGGATGATGAAGAAGAAGAAGCAGAAAGAAGAAGAGAGATCAAGAAGAAAGAGGTTAATTTGTGATCTAAAACTCAAAGGTTGTTGAAAAACAGTGTGAAAAAGCTAAGAACAAATTGAAAAACATGGAAAAGCAGAGATTTGGATTATGTGTTAATGCAGCAAAATGGAAGAACAGGGGCAGGTGAGAATGTGGGTTGGTATTGGAGATGATGAGAGGGGTGGGTATCATAAAGGATTATGTGTTGTGTTGGTGTTAGTGGTCCTATAAGCATTTGCCTCTCAGCCATTTCAATATCTGTTCTCTGTGGCTTCACGTGCATGCTTTTGTCTTTGTGTTCCTGAATAGTGTAAGGTAAGGGCTCCAAAGGGCCTCCCCTTTTTGTTTTGAACTTTCAAATCTCTCCCTCTCTCGTAGTTATTATTTTGACCTTTGTTGTAGAATTTTTATACTGTGTTTAACAAAAATCAATGTGGATACTACTAGTTAGACTCCTATCTCTACGCCCATATCGAACCACCTTTTTTTGAATTAGAAACTAGATTGGATACCACGTTGTTTAGAATCTAAGTTTTGATGATGCTATAATAAAGTTTATTGTTACGAAGTTGAGAACTGACTTATTGGAAAGATAGGATTAGGTAATTCTACTGGAGAAGGCCATCAACACTCAACTTACCAAAATGTATCGGGAGTAAGTAGTTCAAGGAGCATGGGATAGGT ATGGAGCAACCTCCATTCATTTCTCACCGGCGAGACGAACCGGAGTTCAGCCTCCGTGAATGGGCGGCAAAGGCTAAAATTGGCCGCGACCCCGCCATTTCCAGGCGATTCTCCGGGTCCTACATCAGAAGCTTTCGAGAAGACGCGAGGTCGTTTCGATCAAATGTCACCACCGTCACTAGCACCGCCTCCTCTCCTGGATACCCTTTCGGAGACGAAATTGACCCTGCTACTTATTCGTTCACTAATGCTATCAAGGCACTGCAAGCCAGGTCGCTTAACAGTTGGGAATGCTTTTCTCTTGATGGGTTTACGTTGAATTCGAAGTGGAATGAAGCCGAGAAGTATATATGTAATCCACTTTCTGGGGAAGTTCCCATGGAGTGTTTGTCTGCAAAATCGCTTAGTGGGAGGTCATTCAAGAACTTAGCGAACAGAATTACCATATCTGCTCCTTTAGTTTATTCCAATCATTCGCAAATTGGAACAAAGCCATATTCTATTTCACAACTAGTTCAGAAACTCCCAATTCCAGAGAACAAAGTGGAAGCCAATGGCATGACCAGAGATATGGGAACTCAAAGCACACCAACAGTCGTTGGTTCAAACAGTCCTAGTCCTGCTTCCACGCCTCCTATTGTGGAGAGAGCATTAAAGAGATGCGAATTAGAAGAAGACTCGCCCAATTCCAATTCTAAAAGTACTCCCGAGACAGAGGTGATAAGGAGAGAATTGAAGGAGGAGAGAGCAAAAGAAGAAGAAAAGGAAGTAGTACATAGAGAAACAATAGCAGAAGAGAAGTTCAAGCAAGGAGGATGCTTGTCATGGATGATGAAGAAGAAGAAGCAGAAAGAAGAAGAGAGATCAAGAAGAAAGAGGTTAATTTGTGATCTAAAACTCAAAGGTTGTTGA MEQPPFISHRRDEPEFSLREWAAKAKIGRDPAISRRFSGSYIRSFREDARSFRSNVTTVTSTASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNPLSGEVPMECLSAKSLSGRSFKNLANRITISAPLVYSNHSQIGTKPYSISQLVQKLPIPENKVEANGMTRDMGTQSTPTVVGSNSPSPASTPPIVERALKRCELEEDSPNSNSKSTPETEVIRRELKEERAKEEEKEVVHRETIAEEKFKQGGCLSWMMKKKKQKEEERSRRKRLICDLKLKGC Homology
BLAST of Carg07489 vs. NCBI nr
Match: KAG7036749.1 (hypothetical protein SDJN02_00369 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 592.0 bits (1525), Expect = 2.8e-165 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0
BLAST of Carg07489 vs. NCBI nr
Match: XP_022948348.1 (uncharacterized protein LOC111452052 [Cucurbita moschata]) HSP 1 Score: 590.9 bits (1522), Expect = 6.3e-165 Identity = 302/303 (99.67%), Postives = 303/303 (100.00%), Query Frame = 0
BLAST of Carg07489 vs. NCBI nr
Match: XP_023523237.1 (uncharacterized protein LOC111787494 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 577.8 bits (1488), Expect = 5.5e-161 Identity = 296/303 (97.69%), Postives = 298/303 (98.35%), Query Frame = 0
BLAST of Carg07489 vs. NCBI nr
Match: XP_022997765.1 (uncharacterized protein LOC111492625 isoform X1 [Cucurbita maxima]) HSP 1 Score: 575.5 bits (1482), Expect = 2.7e-160 Identity = 295/303 (97.36%), Postives = 297/303 (98.02%), Query Frame = 0
BLAST of Carg07489 vs. NCBI nr
Match: KAG6607048.1 (hypothetical protein SDJN03_00390, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 566.2 bits (1458), Expect = 1.7e-157 Identity = 290/292 (99.32%), Postives = 292/292 (100.00%), Query Frame = 0
BLAST of Carg07489 vs. ExPASy TrEMBL
Match: A0A6J1G935 (uncharacterized protein LOC111452052 OS=Cucurbita moschata OX=3662 GN=LOC111452052 PE=4 SV=1) HSP 1 Score: 590.9 bits (1522), Expect = 3.1e-165 Identity = 302/303 (99.67%), Postives = 303/303 (100.00%), Query Frame = 0
BLAST of Carg07489 vs. ExPASy TrEMBL
Match: A0A6J1KAU1 (uncharacterized protein LOC111492625 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492625 PE=4 SV=1) HSP 1 Score: 575.5 bits (1482), Expect = 1.3e-160 Identity = 295/303 (97.36%), Postives = 297/303 (98.02%), Query Frame = 0
BLAST of Carg07489 vs. ExPASy TrEMBL
Match: A0A1S3CFH4 (uncharacterized protein LOC103500139 OS=Cucumis melo OX=3656 GN=LOC103500139 PE=4 SV=1) HSP 1 Score: 503.8 bits (1296), Expect = 4.9e-139 Identity = 262/304 (86.18%), Postives = 279/304 (91.78%), Query Frame = 0
BLAST of Carg07489 vs. ExPASy TrEMBL
Match: A0A0A0L6V9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G259700 PE=4 SV=1) HSP 1 Score: 503.1 bits (1294), Expect = 8.4e-139 Identity = 261/304 (85.86%), Postives = 279/304 (91.78%), Query Frame = 0
BLAST of Carg07489 vs. ExPASy TrEMBL
Match: A0A6J1F439 (uncharacterized protein LOC111442214 OS=Cucurbita moschata OX=3662 GN=LOC111442214 PE=4 SV=1) HSP 1 Score: 497.7 bits (1280), Expect = 3.5e-137 Identity = 261/304 (85.86%), Postives = 280/304 (92.11%), Query Frame = 0
BLAST of Carg07489 vs. TAIR 10
Match: AT5G16030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 207.2 bits (526), Expect = 1.8e-53 Identity = 151/342 (44.15%), Postives = 205/342 (59.94%), Query Frame = 0
BLAST of Carg07489 vs. TAIR 10
Match: AT5G16030.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 204.1 bits (518), Expect = 1.5e-52 Identity = 146/316 (46.20%), Postives = 204/316 (64.56%), Query Frame = 0
BLAST of Carg07489 vs. TAIR 10
Match: AT5G16030.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02500.1); Has 33116 Blast hits to 13831 proteins in 816 species: Archae - 63; Bacteria - 1163; Metazoa - 13507; Fungi - 3213; Plants - 1270; Viruses - 1083; Other Eukaryotes - 12817 (source: NCBI BLink). ) HSP 1 Score: 202.6 bits (514), Expect = 4.5e-52 Identity = 151/343 (44.02%), Postives = 205/343 (59.77%), Query Frame = 0
BLAST of Carg07489 vs. TAIR 10
Match: AT3G02500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16030.1); Has 49 Blast hits to 49 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 175.3 bits (443), Expect = 7.7e-44 Identity = 123/298 (41.28%), Postives = 176/298 (59.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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