Carg07473 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07473
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	LOB domain-containing protein
Location	Carg_Chr01: 2001161 .. 2002321 (+)
RNA-Seq Expression	Carg07473
Synteny	Carg07473

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGGGACTTTTCTTCGATCCTCAAAACTATTTCCCCCTTATCTTCATCTTCTTCAATTCTCTCTCTGTTCCTTCTTCGGATTTTATGCTTTTCTTCTGTAATTGCGGTTGCTGAAAATGCGGATGAGTTGTAATGGTTGCAGAGTTCTTCGCAAAGGTTGTAGTGAAAATTGCAGTATTCGACCTTGTTTGCAGTGGATCAAGAGTCCTGAATCTCAGGCTAACGCTACTGTTTTTCTTGCTAAGTTTTATGGCCGTGCTGGACTCATGAATCTTATCAACGCTGGTCCTGAGCATCTACGGCCTGGTGAGTTCTGTTTCTTGAATTTTGTTGGTTGATTTTGGTCTGATTTTGTGCATTTTGATTGAATTTTGTGTTCGGTTCGATTTTGTAGCGATCTTTAGATCTCTTCTCTATGAGGCTTGTGGACGGATTGTGAATCCGATTTACGGATCGGTTGGATTGTTGTGGTCTAGTAATTGGTATCTCTGTCAGGCGGCTGTTGAGGCGGTGCTTAAAGGTGCTCCGATTATTCCGATTAATTCTGAGGCGGCCGCGACTGGCGATGGACCGCCGTTGAAGGCTTACGACATTCGTCATATTTCGAAGGATGAAAACTCCGCCGCCTCCAACGATGGTGGAGCGAATCGGCGAGTCAGGACTCGGTGCCGTTTTAAGCGATCGGCCGTGAAGGATAAAGAGAGTACTGGAATCGTATCTGCTGTAGCGGAGTCGACTCGGCGACTGTTCTCCTCGACAGAGATTAACCGTTCGTCGAGCGGCGAGTCGTCGCTGAGTCACCAATCTGACTCGCCGCATCTCGAACATGAGAGCAAAGAAACCGAGAGCATGATCTCGGTGGAGACGGCGGATGTTTCTCCTCCTTCGACGCCGTCAGCTTTCTTCAGATCGGAATCCAGTCACGTACAAAGGAAATTCACCAACCACGACGGCAGCAGGATGACAATTCCGGAAAGCGAATTAGCTCTAGAACTTACCCTGGGGATGGAGCCGGTATCACGTGCCCAGCACGTGGTTCCAATGAAGAAGCGAAAGATAGAGGGCAACGATGGGCTGAGGCCCAATAAGGAAACGTGCAATACGGTTTTGGGCCTTGATTTTGCAGCCGGAAACTAGGCCTAATAAGGAGCCCACATATTG

mRNA sequence

CCGGGACTTTTCTTCGATCCTCAAAACTATTTCCCCCTTATCTTCATCTTCTTCAATTCTCTCTCTGTTCCTTCTTCGGATTTTATGCTTTTCTTCTGTAATTGCGGTTGCTGAAAATGCGGATGAGTTGTAATGGTTGCAGAGTTCTTCGCAAAGGTTGTAGTGAAAATTGCAGTATTCGACCTTGTTTGCAGTGGATCAAGAGTCCTGAATCTCAGGCTAACGCTACTGTTTTTCTTGCTAAGTTTTATGGCCGTGCTGGACTCATGAATCTTATCAACGCTGGTCCTGAGCATCTACGGCCTGCGATCTTTAGATCTCTTCTCTATGAGGCTTGTGGACGGATTGTGAATCCGATTTACGGATCGGTTGGATTGTTGTGGTCTAGTAATTGGTATCTCTGTCAGGCGGCTGTTGAGGCGGTGCTTAAAGGTGCTCCGATTATTCCGATTAATTCTGAGGCGGCCGCGACTGGCGATGGACCGCCGTTGAAGGCTTACGACATTCGTCATATTTCGAAGGATGAAAACTCCGCCGCCTCCAACGATGGTGGAGCGAATCGGCGAGTCAGGACTCGGTGCCGTTTTAAGCGATCGGCCGTGAAGGATAAAGAGAGTACTGGAATCGTATCTGCTGTAGCGGAGTCGACTCGGCGACTGTTCTCCTCGACAGAGATTAACCGTTCGTCGAGCGGCGAGTCGTCGCTGAGTCACCAATCTGACTCGCCGCATCTCGAACATGAGAGCAAAGAAACCGAGAGCATGATCTCGGTGGAGACGGCGGATGTTTCTCCTCCTTCGACGCCGTCAGCTTTCTTCAGATCGGAATCCAGTCACGTACAAAGGAAATTCACCAACCACGACGGCAGCAGGATGACAATTCCGGAAAGCGAATTAGCTCTAGAACTTACCCTGGGGATGGAGCCGGTATCACGTGCCCAGCACGTGGTTCCAATGAAGAAGCGAAAGATAGAGGGCAACGATGGGCTGAGGCCCAATAAGGAAACGTGCAATACGGTTTTGGGCCTTGATTTTGCAGCCGGAAACTAGGCCTAATAAGGAGCCCACATATTG

Coding sequence (CDS)

ATGCGGATGAGTTGTAATGGTTGCAGAGTTCTTCGCAAAGGTTGTAGTGAAAATTGCAGTATTCGACCTTGTTTGCAGTGGATCAAGAGTCCTGAATCTCAGGCTAACGCTACTGTTTTTCTTGCTAAGTTTTATGGCCGTGCTGGACTCATGAATCTTATCAACGCTGGTCCTGAGCATCTACGGCCTGCGATCTTTAGATCTCTTCTCTATGAGGCTTGTGGACGGATTGTGAATCCGATTTACGGATCGGTTGGATTGTTGTGGTCTAGTAATTGGTATCTCTGTCAGGCGGCTGTTGAGGCGGTGCTTAAAGGTGCTCCGATTATTCCGATTAATTCTGAGGCGGCCGCGACTGGCGATGGACCGCCGTTGAAGGCTTACGACATTCGTCATATTTCGAAGGATGAAAACTCCGCCGCCTCCAACGATGGTGGAGCGAATCGGCGAGTCAGGACTCGGTGCCGTTTTAAGCGATCGGCCGTGAAGGATAAAGAGAGTACTGGAATCGTATCTGCTGTAGCGGAGTCGACTCGGCGACTGTTCTCCTCGACAGAGATTAACCGTTCGTCGAGCGGCGAGTCGTCGCTGAGTCACCAATCTGACTCGCCGCATCTCGAACATGAGAGCAAAGAAACCGAGAGCATGATCTCGGTGGAGACGGCGGATGTTTCTCCTCCTTCGACGCCGTCAGCTTTCTTCAGATCGGAATCCAGTCACGTACAAAGGAAATTCACCAACCACGACGGCAGCAGGATGACAATTCCGGAAAGCGAATTAGCTCTAGAACTTACCCTGGGGATGGAGCCGGTATCACGTGCCCAGCACGTGGTTCCAATGAAGAAGCGAAAGATAGAGGGCAACGATGGGCTGAGGCCCAATAAGGAAACGTGCAATACGGTTTTGGGCCTTGATTTTGCAGCCGGAAACTAG

Protein sequence

MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATGDGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRRLFSSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPPSTPSAFFRSESSHVQRKFTNHDGSRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETCNTVLGLDFAAGN

Homology

[Close]

BLAST of Carg07473 vs. NCBI nr
Match: KAG7036733.1 (LOB domain-containing protein 41 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 613.2 bits (1580), Expect = 1.2e-171
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
           DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR
Sbjct: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180

Query: 181 LFSSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPPSTPSAFFRSESSH 240
           LFSSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPPSTPSAFFRSESSH
Sbjct: 181 LFSSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPPSTPSAFFRSESSH 240

Query: 241 VQRKFTNHDGSRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETCNT 300
           VQRKFTNHDGSRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETCNT
Sbjct: 241 VQRKFTNHDGSRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETCNT 300

Query: 301 VLGLDFAAGN 311
           VLGLDFAAGN
Sbjct: 301 VLGLDFAAGN 310

[Close]

BLAST of Carg07473 vs. NCBI nr
Match: XP_022948958.1 (LOB domain-containing protein 41-like [Cucurbita moschata] >XP_022948959.1 LOB domain-containing protein 41-like [Cucurbita moschata])

HSP 1 Score: 606.3 bits (1562), Expect = 1.5e-169
Identity = 306/310 (98.71%), Postives = 308/310 (99.35%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNW+LCQAAVEAVLKG+PIIPINSEAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGSPIIPINSEAAATG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
           DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR
Sbjct: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180

Query: 181 LFSSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPPSTPSAFFRSESSH 240
           LFSSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPPS PSAFFRSESSH
Sbjct: 181 LFSSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPPSPPSAFFRSESSH 240

Query: 241 VQRKFTNHDGSRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETCNT 300
           VQRKFTNHDG RMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETCNT
Sbjct: 241 VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETCNT 300

Query: 301 VLGLDFAAGN 311
           VLGLDFAAGN
Sbjct: 301 VLGLDFAAGN 310

[Close]

BLAST of Carg07473 vs. NCBI nr
Match: KAG6607034.1 (LOB domain-containing protein 41, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 605.9 bits (1561), Expect = 1.9e-169
Identity = 306/310 (98.71%), Postives = 307/310 (99.03%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
           DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGI SAVAESTRR
Sbjct: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIASAVAESTRR 180

Query: 181 LFSSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPPSTPSAFFRSESSH 240
           LFSSTEINRSSSG+SSLSHQSDSPHLEHESKETESMISVETADVSPPS PSAFFRSESSH
Sbjct: 181 LFSSTEINRSSSGDSSLSHQSDSPHLEHESKETESMISVETADVSPPSPPSAFFRSESSH 240

Query: 241 VQRKFTNHDGSRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETCNT 300
           VQRKFTNHDG RMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETCNT
Sbjct: 241 VQRKFTNHDGVRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETCNT 300

Query: 301 VLGLDFAAGN 311
           VLGLDFAAGN
Sbjct: 301 VLGLDFAAGN 310

[Close]

BLAST of Carg07473 vs. NCBI nr
Match: XP_023524743.1 (LOB domain-containing protein 41-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 600.9 bits (1548), Expect = 6.2e-168
Identity = 302/310 (97.42%), Postives = 305/310 (98.39%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNW+LCQAAVEAVLKGAPIIPINSEAA TG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINSEAATTG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
           DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR
Sbjct: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180

Query: 181 LFSSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPPSTPSAFFRSESSH 240
           LFSSTEINRSSSGESSL+HQSDSPHLEHESKETESMISVETADVSPPS PSAFFRSESSH
Sbjct: 181 LFSSTEINRSSSGESSLTHQSDSPHLEHESKETESMISVETADVSPPSAPSAFFRSESSH 240

Query: 241 VQRKFTNHDGSRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETCNT 300
           VQRKFTNHDG RMTIPESELALELTLGMEPVSRAQHVVPMKKRKIE NDGLRPNKETCNT
Sbjct: 241 VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEANDGLRPNKETCNT 300

Query: 301 VLGLDFAAGN 311
           +LGLDF AGN
Sbjct: 301 ILGLDFVAGN 310

[Close]

BLAST of Carg07473 vs. NCBI nr
Match: XP_022997669.1 (LOB domain-containing protein 41-like [Cucurbita maxima] >XP_022997672.1 LOB domain-containing protein 41-like [Cucurbita maxima])

HSP 1 Score: 587.4 bits (1513), Expect = 7.1e-164
Identity = 299/310 (96.45%), Postives = 302/310 (97.42%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNW+LCQAAVEAVLKGAPIIPIN EAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
           DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR
Sbjct: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180

Query: 181 LFSSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPPSTPSAFFRSESSH 240
           LF+STEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSP S  SAFFRS SSH
Sbjct: 181 LFTSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPLSPSSAFFRSGSSH 240

Query: 241 VQRKFTNHDGSRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETCNT 300
           VQRKFTNHDG RMTIPESELALELTLGMEPVSRAQHVVPMKKRKIE + GLRPNKETCNT
Sbjct: 241 VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEADGGLRPNKETCNT 300

Query: 301 VLGLDFAAGN 311
           VLGLDFAAGN
Sbjct: 301 VLGLDFAAGN 310

[Close]

BLAST of Carg07473 vs. ExPASy Swiss-Prot
Match: Q9M886 (LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.6e-78
Identity = 176/306 (57.52%), Postives = 202/306 (66.01%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSE+CSIRPCL WIKSPE+QANATVFLAKFYGRAGLMNLINAGP H
Sbjct: 1   MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATG 120
           LRP IFRSLL+EACGRIVNPIYGSVGLLWS NW LCQ AVEAV+KG P+  I ++AA  G
Sbjct: 61  LRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
            GPPLK YDIRHISKD+NSAA+  G  + ++    R KR           VS VA     
Sbjct: 121 QGPPLKIYDIRHISKDDNSAAAATGSTDLKLAKTRRAKR-----------VSTVAIQAES 180

Query: 181 LFSSTEINRSSSGESSLSHQSD--SPHLEHESKETESMISVETADVSPPSTPSAFFRSES 240
              S E    +S +SSLSHQS+  + H E ESKE+ES +S E    SPP+   +      
Sbjct: 181 EGKSDE----ASHDSSLSHQSEIVAAH-EGESKESESNVS-EVLAFSPPAVKGS------ 240

Query: 241 SHVQRKFTNHDGSRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETC 300
                               E+ L+LTL +EPVSRA HVVP+KKR+I G  G    + TC
Sbjct: 241 -------------------GEIKLDLTLRLEPVSRAYHVVPVKKRRI-GVFGTCQKESTC 263

Query: 301 NTVLGL 305
            T L L
Sbjct: 301 KTELML 263

[Close]

BLAST of Carg07473 vs. ExPASy Swiss-Prot
Match: Q9ZW96 (LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 9.6e-71
Identity = 159/307 (51.79%), Postives = 183/307 (59.61%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKS ESQANATVFLAKFYGRAGLMNL+N GP+H
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWS NW+LCQAAVEAV++G+P+ PI  +AA TG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAAVTG 120

Query: 121 DGPPL--KAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAEST 180
             PP   K  DIRH+S       S D    RR R  C+ +R+                  
Sbjct: 121 QAPPFNNKLCDIRHVS-------SRDENVKRRSRGACKEERNV----------------- 180

Query: 181 RRLFSSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPPSTPSAFFRSES 240
                     RS S ESSLSH+S    +  E   TE                        
Sbjct: 181 ----------RSLSHESSLSHESP---VSSEETTTEE----------------------- 229

Query: 241 SHVQRKFTNHDGSRMTIPESELALELTLGMEPVSRAQH-VVPMKKRKIEGNDGLRPNKET 300
                            P++ + LELTLG+EP++R  H VVPMKKRK+E   G   +++T
Sbjct: 241 -----------------PKTWIGLELTLGLEPLARGNHVVVPMKKRKLE-RCGTSEDEDT 229

Query: 301 CNTVLGL 305
           C   LGL
Sbjct: 301 CKIELGL 229

[Close]

BLAST of Carg07473 vs. ExPASy Swiss-Prot
Match: Q9CA30 (LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 8.7e-56
Identity = 107/170 (62.94%), Postives = 130/170 (76.47%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MR+SCNGCRVLRKGC+++C+IRPCLQWIKS +SQANAT+FLAKFYGRAGL+NLI +GP+H
Sbjct: 1   MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPI--IPINSEAAA 120
           LRPAIFRSLLYEACGRIVNP+ GSVGL+WS NW  CQAAV+AVL G PI   P+ S +A+
Sbjct: 61  LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS 120

Query: 121 TGDGPPLKAYDIRHISKDENSAASNDG------GANRRVRTRCRFKRSAV 163
               PP + YDIRH++KD  +   +         AN+      RFKR +V
Sbjct: 121 HQIIPPHRTYDIRHVAKDPTTGGDSSENLATRVNANKSKTQTGRFKRESV 170

[Close]

BLAST of Carg07473 vs. ExPASy Swiss-Prot
Match: Q9SN23 (LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.1e-42
Identity = 95/197 (48.22%), Postives = 124/197 (62.94%), Query Frame = 0


Query: 3   MSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLR 62
           MSCNGCRVLRKGCSENC +RPC+QWI+SPE+Q +ATVF+AKF+GRAGLM+ I+A PE   
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATGDG 122
           PA+F+SLLYEACGR VNP+ G+VGLLW+ NW +CQAAVE VL+G  + PI       G  
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFA 120

Query: 123 --PPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 182
             P   + +   I  +  +    D   +R +   CRF  S  + +       + A   +R
Sbjct: 121 GFPSPTSDEASEICTEMLNLRKADDSGDRNIYHHCRFSSSRSRSR-------STASPPKR 180

Query: 183 LFSSTEINRSSSGESSL 198
              S+E   SS  + SL
Sbjct: 181 KRLSSEQQPSSELDLSL 190

[Close]

BLAST of Carg07473 vs. ExPASy Swiss-Prot
Match: Q9SZE8 (LOB domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=LBD39 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.2e-42
Identity = 91/167 (54.49%), Postives = 117/167 (70.06%), Query Frame = 0


Query: 3   MSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLR 62
           MSCNGCRVLRKGCSE C +RPCLQWI+S ESQ +ATVF+AKF+GRAGLM+ I++ PE  R
Sbjct: 1   MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQR 60

Query: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATGDG 122
           PA+F+SLL+EACGR VNP+ G+VG+LW+ NW++CQAAVE VL+G  + PI+       + 
Sbjct: 61  PALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPISDLL----ES 120

Query: 123 PPLKAYDIRHISKDENSAASNDGGANRRVRTRCRF--KRSAVKDKES 168
           P L       IS DE+S   +    +R     CRF   RS  + K+S
Sbjct: 121 PSLM------ISCDESSEIWHQ-DVSRNQTHHCRFSTSRSTTEMKDS 156

[Close]

BLAST of Carg07473 vs. ExPASy TrEMBL
Match: A0A6J1GAR7 (LOB domain-containing protein 41-like OS=Cucurbita moschata OX=3662 GN=LOC111452450 PE=3 SV=1)

HSP 1 Score: 606.3 bits (1562), Expect = 7.2e-170
Identity = 306/310 (98.71%), Postives = 308/310 (99.35%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNW+LCQAAVEAVLKG+PIIPINSEAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGSPIIPINSEAAATG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
           DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR
Sbjct: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180

Query: 181 LFSSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPPSTPSAFFRSESSH 240
           LFSSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPPS PSAFFRSESSH
Sbjct: 181 LFSSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPPSPPSAFFRSESSH 240

Query: 241 VQRKFTNHDGSRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETCNT 300
           VQRKFTNHDG RMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETCNT
Sbjct: 241 VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETCNT 300

Query: 301 VLGLDFAAGN 311
           VLGLDFAAGN
Sbjct: 301 VLGLDFAAGN 310

[Close]

BLAST of Carg07473 vs. ExPASy TrEMBL
Match: A0A6J1KC77 (LOB domain-containing protein 41-like OS=Cucurbita maxima OX=3661 GN=LOC111492566 PE=3 SV=1)

HSP 1 Score: 587.4 bits (1513), Expect = 3.5e-164
Identity = 299/310 (96.45%), Postives = 302/310 (97.42%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNW+LCQAAVEAVLKGAPIIPIN EAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
           DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR
Sbjct: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180

Query: 181 LFSSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPPSTPSAFFRSESSH 240
           LF+STEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSP S  SAFFRS SSH
Sbjct: 181 LFTSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPLSPSSAFFRSGSSH 240

Query: 241 VQRKFTNHDGSRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETCNT 300
           VQRKFTNHDG RMTIPESELALELTLGMEPVSRAQHVVPMKKRKIE + GLRPNKETCNT
Sbjct: 241 VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEADGGLRPNKETCNT 300

Query: 301 VLGLDFAAGN 311
           VLGLDFAAGN
Sbjct: 301 VLGLDFAAGN 310

[Close]

BLAST of Carg07473 vs. ExPASy TrEMBL
Match: A0A6J1J6I5 (LOB domain-containing protein 41 OS=Cucurbita maxima OX=3661 GN=LOC111482207 PE=3 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 3.6e-137
Identity = 255/308 (82.79%), Postives = 275/308 (89.29%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCL WIKSP+SQANATVFLAKFYGRAGLMNLINAGP+H
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPDSQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWS +W LCQAAVEAVLKGAPI PINSEAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
           DGPPLKAYDIRH+SKDENSAASNDGG NRRV+TRCRFKRSAVK K   GI S V ESTRR
Sbjct: 121 DGPPLKAYDIRHVSKDENSAASNDGGVNRRVKTRCRFKRSAVKAKACKGISSTVEESTRR 180

Query: 181 LFSSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPPSTPSAFFRSESSH 240
           L  S E+NRSSSGESSLSHQSDSPH+E+ESKETESMISV TA+ SPP      FRSES+ 
Sbjct: 181 L-CSIELNRSSSGESSLSHQSDSPHVENESKETESMISVSTAEFSPPPVLPVLFRSESTS 240

Query: 241 VQRKFTNHDGSRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETCNT 300
           VQ++  + DG+ + IP+SELALELTLGM+PVSRA+HV+PMKKRKIE + GLRPN E CNT
Sbjct: 241 VQKRLGHGDGT-VPIPQSELALELTLGMKPVSRAEHVIPMKKRKIEADVGLRPNNEACNT 300

Query: 301 VLGLDFAA 309
           VLGLDFAA
Sbjct: 301 VLGLDFAA 306

[Close]

BLAST of Carg07473 vs. ExPASy TrEMBL
Match: A0A6J1F4Q5 (LOB domain-containing protein 41 OS=Cucurbita moschata OX=3662 GN=LOC111442325 PE=3 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.7e-134
Identity = 253/309 (81.88%), Postives = 271/309 (87.70%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCL WIKSP+SQANATVFLAKFYGRAGLMNLINAGP+H
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPDSQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWS +W LCQAAVEAVLKGAPI PINSEAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
           DGPPLKAYDIRH+SKDENSAASNDGG NRRV+TRCRFKRSAVK K   GI S V ESTRR
Sbjct: 121 DGPPLKAYDIRHVSKDENSAASNDGGVNRRVKTRCRFKRSAVKTKACKGISSTVDESTRR 180

Query: 181 LFSSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPPSTPSAFFRSESSH 240
           L  S E+NRSSSGESSLSHQSDSPH+E+ESKET+SMISV TA  SPP      FRSES+ 
Sbjct: 181 L-CSIELNRSSSGESSLSHQSDSPHVENESKETDSMISVSTAKFSPPPVLPVLFRSESTS 240

Query: 241 VQRKFTNHDGSRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRP-NKETCN 300
           V ++   H G  + IP+SELALELTLGM+PVSRA+HV+PMKKRKIE + GLRP N E CN
Sbjct: 241 VPKR-PGHGGGTVPIPQSELALELTLGMKPVSRAEHVIPMKKRKIEADVGLRPNNNEACN 300

Query: 301 TVLGLDFAA 309
           TVLGLDFAA
Sbjct: 301 TVLGLDFAA 307

[Close]

BLAST of Carg07473 vs. ExPASy TrEMBL
Match: A0A0A0LCG6 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G278920 PE=3 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 1.4e-133
Identity = 251/308 (81.49%), Postives = 265/308 (86.04%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGP+H
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWS +W LCQAAVEAVLKGAPI PINSEAA TG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
           DGPPLKAYDIRH+SKDENS ASNDGGANR V+TRCRFKRS+VK K S GI S V + + R
Sbjct: 121 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR 180

Query: 181 LFSSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPPSTPSAFFRSESSH 240
              STE+NRSSSGESSLSHQSDS HLE+ESKETESMISVETA+VSP    S  FRSES+ 
Sbjct: 181 PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSEST- 240

Query: 241 VQRKFTNHDGSRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETCNT 300
                   +G  + IP SELALELTLGMEPV RAQHV+PMKKRKIE   GLRP  ETCNT
Sbjct: 241 -----GGREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNT 300

Query: 301 VLGLDFAA 309
           VLGLDFAA
Sbjct: 301 VLGLDFAA 302

[Close]

BLAST of Carg07473 vs. TAIR 10
Match: AT3G02550.1 (LOB domain-containing protein 41 )

HSP 1 Score: 294.3 bits (752), Expect = 1.2e-79
Identity = 176/306 (57.52%), Postives = 202/306 (66.01%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSE+CSIRPCL WIKSPE+QANATVFLAKFYGRAGLMNLINAGP H
Sbjct: 1   MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATG 120
           LRP IFRSLL+EACGRIVNPIYGSVGLLWS NW LCQ AVEAV+KG P+  I ++AA  G
Sbjct: 61  LRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
            GPPLK YDIRHISKD+NSAA+  G  + ++    R KR           VS VA     
Sbjct: 121 QGPPLKIYDIRHISKDDNSAAAATGSTDLKLAKTRRAKR-----------VSTVAIQAES 180

Query: 181 LFSSTEINRSSSGESSLSHQSD--SPHLEHESKETESMISVETADVSPPSTPSAFFRSES 240
              S E    +S +SSLSHQS+  + H E ESKE+ES +S E    SPP+   +      
Sbjct: 181 EGKSDE----ASHDSSLSHQSEIVAAH-EGESKESESNVS-EVLAFSPPAVKGS------ 240

Query: 241 SHVQRKFTNHDGSRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETC 300
                               E+ L+LTL +EPVSRA HVVP+KKR+I G  G    + TC
Sbjct: 241 -------------------GEIKLDLTLRLEPVSRAYHVVPVKKRRI-GVFGTCQKESTC 263

Query: 301 NTVLGL 305
            T L L
Sbjct: 301 KTELML 263

[Close]

BLAST of Carg07473 vs. TAIR 10
Match: AT1G67100.1 (LOB domain-containing protein 40 )

HSP 1 Score: 268.5 bits (685), Expect = 6.8e-72
Identity = 159/307 (51.79%), Postives = 183/307 (59.61%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKS ESQANATVFLAKFYGRAGLMNL+N GP+H
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWS NW+LCQAAVEAV++G+P+ PI  +AA TG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAAVTG 120

Query: 121 DGPPL--KAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAEST 180
             PP   K  DIRH+S       S D    RR R  C+ +R+                  
Sbjct: 121 QAPPFNNKLCDIRHVS-------SRDENVKRRSRGACKEERNV----------------- 180

Query: 181 RRLFSSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPPSTPSAFFRSES 240
                     RS S ESSLSH+S    +  E   TE                        
Sbjct: 181 ----------RSLSHESSLSHESP---VSSEETTTEE----------------------- 229

Query: 241 SHVQRKFTNHDGSRMTIPESELALELTLGMEPVSRAQH-VVPMKKRKIEGNDGLRPNKET 300
                            P++ + LELTLG+EP++R  H VVPMKKRK+E   G   +++T
Sbjct: 241 -----------------PKTWIGLELTLGLEPLARGNHVVVPMKKRKLE-RCGTSEDEDT 229

Query: 301 CNTVLGL 305
           C   LGL
Sbjct: 301 CKIELGL 229

[Close]

BLAST of Carg07473 vs. TAIR 10
Match: AT1G68510.1 (LOB domain-containing protein 42 )

HSP 1 Score: 218.8 bits (556), Expect = 6.2e-57
Identity = 107/170 (62.94%), Postives = 130/170 (76.47%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MR+SCNGCRVLRKGC+++C+IRPCLQWIKS +SQANAT+FLAKFYGRAGL+NLI +GP+H
Sbjct: 1   MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPI--IPINSEAAA 120
           LRPAIFRSLLYEACGRIVNP+ GSVGL+WS NW  CQAAV+AVL G PI   P+ S +A+
Sbjct: 61  LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS 120

Query: 121 TGDGPPLKAYDIRHISKDENSAASNDG------GANRRVRTRCRFKRSAV 163
               PP + YDIRH++KD  +   +         AN+      RFKR +V
Sbjct: 121 HQIIPPHRTYDIRHVAKDPTTGGDSSENLATRVNANKSKTQTGRFKRESV 170

[Close]

BLAST of Carg07473 vs. TAIR 10
Match: AT3G49940.1 (LOB domain-containing protein 38 )

HSP 1 Score: 175.3 bits (443), Expect = 7.9e-44
Identity = 95/197 (48.22%), Postives = 124/197 (62.94%), Query Frame = 0


Query: 3   MSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLR 62
           MSCNGCRVLRKGCSENC +RPC+QWI+SPE+Q +ATVF+AKF+GRAGLM+ I+A PE   
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATGDG 122
           PA+F+SLLYEACGR VNP+ G+VGLLW+ NW +CQAAVE VL+G  + PI       G  
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFA 120

Query: 123 --PPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 182
             P   + +   I  +  +    D   +R +   CRF  S  + +       + A   +R
Sbjct: 121 GFPSPTSDEASEICTEMLNLRKADDSGDRNIYHHCRFSSSRSRSR-------STASPPKR 180

Query: 183 LFSSTEINRSSSGESSL 198
              S+E   SS  + SL
Sbjct: 181 KRLSSEQQPSSELDLSL 190

[Close]

BLAST of Carg07473 vs. TAIR 10
Match: AT4G37540.1 (LOB domain-containing protein 39 )

HSP 1 Score: 173.7 bits (439), Expect = 2.3e-43
Identity = 91/167 (54.49%), Postives = 117/167 (70.06%), Query Frame = 0


Query: 3   MSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLR 62
           MSCNGCRVLRKGCSE C +RPCLQWI+S ESQ +ATVF+AKF+GRAGLM+ I++ PE  R
Sbjct: 1   MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQR 60

Query: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATGDG 122
           PA+F+SLL+EACGR VNP+ G+VG+LW+ NW++CQAAVE VL+G  + PI+       + 
Sbjct: 61  PALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPISDLL----ES 120

Query: 123 PPLKAYDIRHISKDENSAASNDGGANRRVRTRCRF--KRSAVKDKES 168
           P L       IS DE+S   +    +R     CRF   RS  + K+S
Sbjct: 121 PSLM------ISCDESSEIWHQ-DVSRNQTHHCRFSTSRSTTEMKDS 156

The following BLAST results are available for this feature:

BLAST of Carg07473 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036733.1	1.2e-171	100.00	LOB domain-containing protein 41 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022948958.1	1.5e-169	98.71	LOB domain-containing protein 41-like [Cucurbita moschata] >XP_022948959.1 LOB d...	[more]
KAG6607034.1	1.9e-169	98.71	LOB domain-containing protein 41, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_023524743.1	6.2e-168	97.42	LOB domain-containing protein 41-like [Cucurbita pepo subsp. pepo]	[more]
XP_022997669.1	7.1e-164	96.45	LOB domain-containing protein 41-like [Cucurbita maxima] >XP_022997672.1 LOB dom...	[more]

BLAST of Carg07473 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M886	1.6e-78	57.52	LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 S...	[more]
Q9ZW96	9.6e-71	51.79	LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 S...	[more]
Q9CA30	8.7e-56	62.94	LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 S...	[more]
Q9SN23	1.1e-42	48.22	LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 S...	[more]
Q9SZE8	3.2e-42	54.49	LOB domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=LBD39 PE=2 S...	[more]

BLAST of Carg07473 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GAR7	7.2e-170	98.71	LOB domain-containing protein 41-like OS=Cucurbita moschata OX=3662 GN=LOC111452...	[more]
A0A6J1KC77	3.5e-164	96.45	LOB domain-containing protein 41-like OS=Cucurbita maxima OX=3661 GN=LOC11149256...	[more]
A0A6J1J6I5	3.6e-137	82.79	LOB domain-containing protein 41 OS=Cucurbita maxima OX=3661 GN=LOC111482207 PE=...	[more]
A0A6J1F4Q5	1.7e-134	81.88	LOB domain-containing protein 41 OS=Cucurbita moschata OX=3662 GN=LOC111442325 P...	[more]
A0A0A0LCG6	1.4e-133	81.49	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G278920 PE=3 SV...	[more]

BLAST of Carg07473 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02550.1	1.2e-79	57.52	LOB domain-containing protein 41	[more]
AT1G67100.1	6.8e-72	51.79	LOB domain-containing protein 40	[more]
AT1G68510.1	6.2e-57	62.94	LOB domain-containing protein 42	[more]
AT3G49940.1	7.9e-44	48.22	LOB domain-containing protein 38	[more]
AT4G37540.1	2.3e-43	54.49	LOB domain-containing protein 39	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 4..103 e-value: 4.4E-24 score: 84.9
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 3..109 score: 17.058788
IPR017414	LOB domain-containing protein	PIRSF	PIRSF038155	AS2	coord: 1..307 e-value: 1.6E-96 score: 322.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..200
None	No IPR available	PANTHER	PTHR31304:SF9	LOB DOMAIN-CONTAINING PROTEIN 40	coord: 1..304
None	No IPR available	PANTHER	PTHR31304	LOB DOMAIN-CONTAINING PROTEIN 38	coord: 1..304

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07473-RA	Carg07473-RA	mRNA