Carg07406 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg07406
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like
LocationCarg_Chr01: 1588749 .. 1593303 (+)
RNA-Seq ExpressionCarg07406
SyntenyCarg07406
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTAGTCGCAAATTTCCACTCCGTCACAACGGCTCGAGCCACCTAACATAACTCGCAAACCAGAGACTCCGATTCAGTGGTAACCTCGAGAGATTCAGAAGATGGCTTCAGGCTGGGGAATCACCGGGAACAAGGGCCGATGCTACGATTTCTGGATTGACTTCAGCGATTGTATGTCCCGCTGCCGAGAACCAAAGGACTGTGCTCTACTCCGTGAAGATTACCTAGAGTGCCTCCACCATTCCAAGGAGGTGAGACCTTCCATTTTCCTTACTTTTTTCACTTCTGTTTTGTTTTTCCTCCAATTTTTCATGTATAAGTTAGATTAATTGCCTGAATAGGGATTAGATGTGTGCCTCTTTGATTCTTCGAGCCTCTGATGCCTAATGCGACCTTGGCTCATGTTTTCAACATCGCATCCGGAGGCGGTTGCCTGAGATTTGGTTTAGATCTGTTTTTCTATATAACTACAAAATTTCTGTAGGAACTTAAATTGCGATTACTTCGATTTTCGAGGCTTTAGGTGCTAGTGATCGATTAGGGAAAGGTTGAGTCGTATCAATGAAAATAAGAAGGTTCTGTGGCTTCCAGTTCGAGTTTCACATTGTTTCTCAATCTTTTGATGTATGTTTTAGAGTTATCATTAACAAGAATAAATGTTTTATAAAAGCAAGGTGGAGCTCTCAGTCTAAGCTTCTTACATTTTCTGTTACTCGGATAATTAGAGGACGGGTTATCTCCTTTTTCTTAAAGTGAACAGCTTACCACGCATTGCTTGTTATTGCTTATCACGATTGCCTCCTTTTTACTAAAGTTGGATTAGTGAAAGTTATAGTCTGTTTAGGCATTCCGTTAAATCGCAACAGTATGATTTTATGCTTGTAAGTCCTTGAACTCTGAGGTTTTTTCTATTTGGTCCATGAACTTTCAAATGTGTGCCATAGATCACAAAATTTTCAATTTTGTGTTGAATATATCTATGAAAATTCTAAATTAATTGACATATTCGATATAAATTTGAATTTTAAGTCTAATGGAACCATAAAATTTCAATTTTGTGTCTACTAATCTATGATTTTTAACAAATTTGAAAGAAATTTGAAAGTTGGATAGTTTATGGGCTAAATAGACACAAGGCTCAAGGTTTAGAGACTAAACTTATTATTTATCCTCTTTCCAAGGATATGAATATATGCACAATCTCTTTGGAGAAATAATTCTTGGAGGCCAGAACAATGTGATTGTGGTTTTATATCTTTGGATGTAAGAGAGAGAAACAAAGAAATTATGGTTTACCATGCATCCAAGGGGTTTTTTTTTTTTTTTTGGGGGGGGGGGGATAATAAAAAAATTTAAAAGAAATGCGGGAAAGGTGGGTAAGTTTCCCGCATTCTTTGGAAGACTGAAACTTATATTATCTCTTTCCAAGGATAATGATAATCTGCACAATCTCTTTGAGAAATAATTCTTTGGAGGCACGGCTCAAGGTTTAGAGACAAACTTATTATTTATCCTCTTCCAAGATATGAATATATGCACAATCTCTTTGAGAAATAATTCTTGGAGGGCCAGAACAATGTGATGTGGTTTATTCTTTGGCGTGTAATAGAGAGAAACAAAGAAATTATGGTTTACCATGCATCCAAGGGGTTTTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGGGGATAATAAAAAAATTTTAAAGAAATGCGGGAAAGGTGGGTAGGTTTCATAATTGAACATACAGTGTGTTTATGCTTGATTTTTCGAATCTGCCAGCGGTCTCTCCTCAATGGATTTCAGCAAATCTTTAGGTTATTGAAGATTCAACTTATCTAGGAAGATTTGAATGTAAAAAGACAATTAAACAACACCAAACGCTAAGTTTAACAGAAAATTATGATAAGTAAAGTCAATTTTTGGATAACGTGGTGGCTTTATGTATTGAATAATATAAGAATGTCTTTATATAAGGAAGAGAAGAAACTTTAATGGGGAACAAGTAGGAAATACAAAAGTAATGTTTTATGTTGTTCGGGGCGAACTATGTCTATGAGCATTTTAATATATGAAGTGGTTCGTTTAGCAGCGTCAATCTTTGCAACTAGAATCTTTCAATATTATTCACCTTGGTGCTGAAATCCTCCACCTTCATCACATTTTCGAATGTAATTTTTGACACCCTGTCTAGTTTCCATTTGTATTTCTTAGATTCCTTACAGATAAGAAGTTGCATTCAGTGGCTTCAGTGTTGCAACTGTTCTTCAATCTATTTAGGCTTTCCGTGTCTTCTTACTTATAGGGACTATCAAGCGGCAACTCTACTTTATATCCCTCAGTGTATTTCCCCTTGGAGAAGGGATGCTAGGGTCTGGACCTCTGACCTTTCTAGGGGTTTCTTCTTCCATTCATATTTTTATTATGTCTTTTCCTCATGCGTCGGTAGCTGCTCTGGTGCTTCTTTTTTTCCTCCCATGGAAGCTCAAAATTCCTAATGAAGTGACGTTTTATGCATGACAAGTTTTACTTGAGAGAGTTAATATCTTCGATTGTGTCCAAAGACACTCTTCCTTAGTTTTGTACTCAGGAGTGGTGCATTCTTTGTAGGAGGCATGAGGAGTACATGGATCATTTGTTATGGGAGTGTTAGTTTGCGAACTATCTTTAGGGTCATTGGATGAGCTTGTTTGGTGTTAGTGACGTGGACCATAGAGATGGACGATCGTTGTTGGAGGGGTGCTTTTGAATCCTCCCTTTAGGGAGAGACGGCTTCCTTGCTGAGAGATGTAATGAGATTTTTTAGGAGAATGAGAAGTGGGGTGAGGAGATTTAGAGGTTGTTAGGCTTAATGCTTCCTTGTGGTCGTTGGTCATTAGGCCTTTTTGTAATTGTGGTCTTGGGGTCGAAGAACGAAGCCCCTTTTGTAGTTAGAGTCAGACACCTGCAGTTTGATCGAAGCCCCTTTTCTTTTGGGCTTGTTTTTTGTATGATCTTGTAGTCTTTCATTTTTTTCGATGAAAGTTTGATTTCTTTCCCTGAAATAACAAAAGTGTACTTATTCTATCACTTGTTTCTCACACTTCTAGACATGAATATATCAGTGAGAAGTTTTATGGTGGCTGAAGTATTACTCTTTTTTGGGGCTTGAGATCAGAGGGAGATTAGTTCAGATTTCTGAAACAAACAAAAGATTTAATCGAAGTGTTTAATTGCGAAATTCATTATACAAGGGCTAAGCACACTGTTATAGAATAGGAAAACCTGGATAAACGTCTAGAGCATGTTTATAAGTGATTTTGTAATGGTTAATATCACTTTTGTTAGGTGTAGAATTACTCAAAATTTAGTCATTCAAAATCAACTTGATGCATCATTTTACACTTCTAAAGGCGATTTTAGCATCATAAAAATTGGTTTTGAAAAATTAAAAGCATGTTTTCAGAGTGGTTTGGAATACCGTACAAGTAATTGTAATCATTTCAAAATCTCCCAAATATGCCCTAAAATGCAAGGAGTATGTTCTGCTTTTATTAAAAATTGATTCTGCTTGCTTTGTAAGAATCCGTCCTAATTCAATTTGCTTGTTTGAACCATTCCTTACAGTTTCAAAGAAGAAACCGTGTCTACAAAGAGGAGCAGCGTAAACTAAGAGCGGCCAAAGGGGAGGCCAAAGAGGGTAAACATGTTGATGCTGCTCATGCATAGTCATAATCATCATTCAGAGATTGAATAATGCAGAATGCATAGACATGCGTTGTTATTTGAACAGTTTTTGGCTTGTTATTTACATTCTATTCTGTCTTTCTTGAATCCGGTATGAAATTCACAAGTCATGCAACAAGGTCAATTCACTTCTTTTTTTCCCTTGCTCTATCAAAAGGGGGCAGCATTATCTGCTTGATGAGGATGATGTGAATGTGTTAATGCCACTTATTTCCAAGTTTTGGTTTAATCAATAAGCTCTTAGCACATTGTCATTTCTATTGATATAGGACGACCCTCCTCCCCTTCCCAAATGGTCTGGCGAAGAAGGGTCAATGTAGTATTTATATTGCCATCCACAGAGAAGGGAGGGGCCTCAACGGATGTCAGAGACGTTTGGAAGGGCCTCTAACTGGTATTACTCACTTACCTCTATTCCCAACCCCAATATGTCGACCTGAAATGCTGGATGAAATTTTTAAATGGCTAGGATAGGACGTTGTGAATTTGTGCATCAAATGCCATATGTGTCAAAATTTTAACTTCGATGATTGATATGCATTTTGAGTCAGTAGTTCAGTAAAAAAACTGTGCTTAATTTTTGAAAGATTTTCGGTCAAGATCTGTTTAGGCCTTCATAACAGGGAGTTAGTTCAATGGTTTCAGATATTGTCCTCTCCTTGGGACGTATTTTAGAGTCGTTTTTCAATTTCTCATTTATCATGACTGAACAAACCTACCCTGAGAATTCTAACTTGATTGAGTTGGCTCTTTGAATCAATGCCACAGCAATGTCTACACCTCTTGTTTTTTTATGCATTGTATTTAAACTTTCAATTTTGTATTT

mRNA sequence

ATTTTAGTCGCAAATTTCCACTCCGTCACAACGGCTCGAGCCACCTAACATAACTCGCAAACCAGAGACTCCGATTCAGTGGTAACCTCGAGAGATTCAGAAGATGGCTTCAGGCTGGGGAATCACCGGGAACAAGGGCCGATGCTACGATTTCTGGATTGACTTCAGCGATTGTATGTCCCGCTGCCGAGAACCAAAGGACTGTGCTCTACTCCGTGAAGATTACCTAGAGTGCCTCCACCATTCCAAGGAGTTTCAAAGAAGAAACCGTGTCTACAAAGAGGAGCAGCGTAAACTAAGAGCGGCCAAAGGGGAGGCCAAAGAGGGTAAACATGTTGATGCTGCTCATGCATAGTCATAATCATCATTCAGAGATTGAATAATGCAGAATGCATAGACATGCGTTGTTATTTGAACAGTTTTTGGCTTGTTATTTACATTCTATTCTGTCTTTCTTGAATCCGGTATGAAATTCACAAGTCATGCAACAAGGTCAATTCACTTCTTTTTTTCCCTTGCTCTATCAAAAGGGGGCAGCATTATCTGCTTGATGAGGATGATGTGAATGTGTTAATGCCACTTATTTCCAAGTTTTGGTTTAATCAATAAGCTCTTAGCACATTGTCATTTCTATTGATATAGGACGACCCTCCTCCCCTTCCCAAATGGTCTGGCGAAGAAGGGTCAATGTAGTATTTATATTGCCATCCACAGAGAAGGGAGGGGCCTCAACGGATGTCAGAGACGTTTGGAAGGGCCTCTAACTGGTATTACTCACTTACCTCTATTCCCAACCCCAATATGTCGACCTGAAATGCTGGATGAAATTTTTAAATGGCTAGGATAGGACGTTGTGAATTTGTGCATCAAATGCCATATGTGTCAAAATTTTAACTTCGATGATTGATATGCATTTTGAGTCAGTAGTTCAGTAAAAAAACTGTGCTTAATTTTTGAAAGATTTTCGGTCAAGATCTGTTTAGGCCTTCATAACAGGGAGTTAGTTCAATGGTTTCAGATATTGTCCTCTCCTTGGGACGTATTTTAGAGTCGTTTTTCAATTTCTCATTTATCATGACTGAACAAACCTACCCTGAGAATTCTAACTTGATTGAGTTGGCTCTTTGAATCAATGCCACAGCAATGTCTACACCTCTTGTTTTTTTATGCATTGTATTTAAACTTTCAATTTTGTATTT

Coding sequence (CDS)

ATGGCTTCAGGCTGGGGAATCACCGGGAACAAGGGCCGATGCTACGATTTCTGGATTGACTTCAGCGATTGTATGTCCCGCTGCCGAGAACCAAAGGACTGTGCTCTACTCCGTGAAGATTACCTAGAGTGCCTCCACCATTCCAAGGAGTTTCAAAGAAGAAACCGTGTCTACAAAGAGGAGCAGCGTAAACTAAGAGCGGCCAAAGGGGAGGCCAAAGAGGGTAAACATGTTGATGCTGCTCATGCATAG

Protein sequence

MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
Homology
[Close]
BLAST of Carg07406 vs. NCBI nr
Match: XP_022948762.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita moschata] >XP_022998534.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita maxima] >KAG7036666.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 177.2 bits (448), Expect = 6.0e-41
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60

Query: 61 EQRKLRAAKGEAKEGKHVDAAHA 84
          EQRKLRAAKGEAKEGKHVDAAHA
Sbjct: 61 EQRKLRAAKGEAKEGKHVDAAHA 83

[Close]
BLAST of Carg07406 vs. NCBI nr
Match: XP_023521877.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 175.6 bits (444), Expect = 1.7e-40
Identity = 82/83 (98.80%), Postives = 82/83 (98.80%), Query Frame = 0 

Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60

Query: 61 EQRKLRAAKGEAKEGKHVDAAHA 84
          EQRKLR AKGEAKEGKHVDAAHA
Sbjct: 61 EQRKLRVAKGEAKEGKHVDAAHA 83

[Close]
BLAST of Carg07406 vs. NCBI nr
Match: XP_022155272.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Momordica charantia])

HSP 1 Score: 172.2 bits (435), Expect = 1.9e-39
Identity = 80/83 (96.39%), Postives = 82/83 (98.80%), Query Frame = 0 

Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNR+YKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKE 60

Query: 61 EQRKLRAAKGEAKEGKHVDAAHA 84
          EQRKLRAA+ EAKEGKHVDAAHA
Sbjct: 61 EQRKLRAAEREAKEGKHVDAAHA 83

[Close]
BLAST of Carg07406 vs. NCBI nr
Match: XP_038905985.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Benincasa hispida])

HSP 1 Score: 171.0 bits (432), Expect = 4.3e-39
Identity = 79/83 (95.18%), Postives = 82/83 (98.80%), Query Frame = 0 

Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNR+YKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKE 60

Query: 61 EQRKLRAAKGEAKEGKHVDAAHA 84
          EQRKLRAA+ +AKEGKHVDAAHA
Sbjct: 61 EQRKLRAAERDAKEGKHVDAAHA 83

[Close]
BLAST of Carg07406 vs. NCBI nr
Match: XP_011652934.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Cucumis sativus] >KGN52808.1 hypothetical protein Csa_015424 [Cucumis sativus])

HSP 1 Score: 169.1 bits (427), Expect = 1.6e-38
Identity = 79/83 (95.18%), Postives = 81/83 (97.59%), Query Frame = 0 

Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC+LLREDYLECLHH KEFQRRNRVYKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCSLLREDYLECLHHFKEFQRRNRVYKE 60

Query: 61 EQRKLRAAKGEAKEGKHVDAAHA 84
          EQRKLRAA+ EAKEGKHVDAAHA
Sbjct: 61 EQRKLRAAEREAKEGKHVDAAHA 83

[Close]
BLAST of Carg07406 vs. ExPASy Swiss-Prot
Match: O82238 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A OS=Arabidopsis thaliana OX=3702 GN=At2g47690 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 9.6e-34
Identity = 69/80 (86.25%), Postives = 73/80 (91.25%), Query Frame = 0 

Query: 1   MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60
           MASGWGITGNKGRCYDFW+DFS+CMS CREPKDC LLREDYLECLHHSKEFQRRNR+YKE
Sbjct: 36  MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 95

Query: 61  EQRKLRAA--KG-EAKEGKH 78
           EQRKLRAA  KG EA +G H
Sbjct: 96  EQRKLRAASRKGEEAGDGTH 115

[Close]
BLAST of Carg07406 vs. ExPASy Swiss-Prot
Match: Q9LZI6 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B OS=Arabidopsis thaliana OX=3702 GN=At3g62790 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.2e-33
Identity = 64/74 (86.49%), Postives = 69/74 (93.24%), Query Frame = 0 

Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60
          MASGWGITGNKGRCYDFW+DFS+CMS CREPKDC LLREDYLECLHHSKEFQRRNR+YKE
Sbjct: 1  MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 60

Query: 61 EQRKLRAAKGEAKE 75
          EQRKLRAA  + +E
Sbjct: 61 EQRKLRAASRKGEE 74

[Close]
BLAST of Carg07406 vs. ExPASy TrEMBL
Match: A0A6J1KEK7 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like OS=Cucurbita maxima OX=3661 GN=LOC111493141 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.9e-41
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60

Query: 61 EQRKLRAAKGEAKEGKHVDAAHA 84
          EQRKLRAAKGEAKEGKHVDAAHA
Sbjct: 61 EQRKLRAAKGEAKEGKHVDAAHA 83

[Close]
BLAST of Carg07406 vs. ExPASy TrEMBL
Match: A0A6J1GA50 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like OS=Cucurbita moschata OX=3662 GN=LOC111452335 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.9e-41
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60

Query: 61 EQRKLRAAKGEAKEGKHVDAAHA 84
          EQRKLRAAKGEAKEGKHVDAAHA
Sbjct: 61 EQRKLRAAKGEAKEGKHVDAAHA 83

[Close]
BLAST of Carg07406 vs. ExPASy TrEMBL
Match: A0A6J1DNW8 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like OS=Momordica charantia OX=3673 GN=LOC111022414 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 9.3e-40
Identity = 80/83 (96.39%), Postives = 82/83 (98.80%), Query Frame = 0 

Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNR+YKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKE 60

Query: 61 EQRKLRAAKGEAKEGKHVDAAHA 84
          EQRKLRAA+ EAKEGKHVDAAHA
Sbjct: 61 EQRKLRAAEREAKEGKHVDAAHA 83

[Close]
BLAST of Carg07406 vs. ExPASy TrEMBL
Match: A0A0A0KTA7 (Fiber protein Fb14 OS=Cucumis sativus OX=3659 GN=Csa_4G001750 PE=3 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 7.9e-39
Identity = 79/83 (95.18%), Postives = 81/83 (97.59%), Query Frame = 0 

Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC+LLREDYLECLHH KEFQRRNRVYKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCSLLREDYLECLHHFKEFQRRNRVYKE 60

Query: 61 EQRKLRAAKGEAKEGKHVDAAHA 84
          EQRKLRAA+ EAKEGKHVDAAHA
Sbjct: 61 EQRKLRAAEREAKEGKHVDAAHA 83

[Close]
BLAST of Carg07406 vs. ExPASy TrEMBL
Match: A0A6J1F476 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like OS=Cucurbita moschata OX=3662 GN=LOC111442238 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.5e-37
Identity = 77/83 (92.77%), Postives = 80/83 (96.39%), Query Frame = 0 

Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC LLREDYLECLHHSKEFQRRNRVYKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRVYKE 60

Query: 61 EQRKLRAAKGEAKEGKHVDAAHA 84
          E+RKLRAA+ EAKEGK V+AAHA
Sbjct: 61 EKRKLRAAEREAKEGKQVEAAHA 83

[Close]
BLAST of Carg07406 vs. TAIR 10
Match: AT2G47690.1 (NADH-ubiquinone oxidoreductase-related )

HSP 1 Score: 143.7 bits (361), Expect = 6.8e-35
Identity = 69/80 (86.25%), Postives = 73/80 (91.25%), Query Frame = 0 

Query: 1   MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60
           MASGWGITGNKGRCYDFW+DFS+CMS CREPKDC LLREDYLECLHHSKEFQRRNR+YKE
Sbjct: 36  MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 95

Query: 61  EQRKLRAA--KG-EAKEGKH 78
           EQRKLRAA  KG EA +G H
Sbjct: 96  EQRKLRAASRKGEEAGDGTH 115

[Close]
BLAST of Carg07406 vs. TAIR 10
Match: AT3G62790.1 (NADH-ubiquinone oxidoreductase-related )

HSP 1 Score: 143.3 bits (360), Expect = 8.9e-35
Identity = 64/74 (86.49%), Postives = 69/74 (93.24%), Query Frame = 0 

Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60
          MASGWGITGNKGRCYDFW+DFS+CMS CREPKDC LLREDYLECLHHSKEFQRRNR+YKE
Sbjct: 1  MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 60

Query: 61 EQRKLRAAKGEAKE 75
          EQRKLRAA  + +E
Sbjct: 61 EQRKLRAASRKGEE 74

[Close]
BLAST of Carg07406 vs. TAIR 10
Match: AT2G47690.2 (NADH-ubiquinone oxidoreductase-related )

HSP 1 Score: 111.3 bits (277), Expect = 3.7e-25
Identity = 50/62 (80.65%), Postives = 53/62 (85.48%), Query Frame = 0 

Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60
          MASGWGITGNKGRCYDFW+DFS+CMS CREPKDC LLREDYLECLHHSKE      V K+
Sbjct: 36 MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEV-----VSKK 92

Query: 61 EQ 63
          EQ
Sbjct: 96 EQ 92

The following BLAST results are available for this feature:
BLAST of Carg07406 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022948762.16.0e-41100.00NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita moschata... [more]
XP_023521877.11.7e-4098.80NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita pepo sub... [more]
XP_022155272.11.9e-3996.39NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Momordica charanti... [more]
XP_038905985.14.3e-3995.18NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Benincasa hispida][more]
XP_011652934.11.6e-3895.18NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Cucumis sativus] >KGN52... [more]
BLAST of Carg07406 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O822389.6e-3486.25NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A OS=Arabidopsis thaliana ... [more]
Q9LZI61.2e-3386.49NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B OS=Arabidopsis thaliana ... [more]
BLAST of Carg07406 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KEK72.9e-41100.00NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like OS=Cucurbita maxima... [more]
A0A6J1GA502.9e-41100.00NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like OS=Cucurbita moscha... [more]
A0A6J1DNW89.3e-4096.39NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like OS=Momordica charan... [more]
A0A0A0KTA77.9e-3995.18Fiber protein Fb14 OS=Cucumis sativus OX=3659 GN=Csa_4G001750 PE=3 SV=1[more]
A0A6J1F4761.5e-3792.77NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like OS=Cucurbita moscha... [more]
BLAST of Carg07406 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G47690.16.8e-3586.25NADH-ubiquinone oxidoreductase-related [more]
AT3G62790.18.9e-3586.49NADH-ubiquinone oxidoreductase-related [more]
AT2G47690.23.7e-2580.65NADH-ubiquinone oxidoreductase-related [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019342NADH:ubiquinone oxidoreductase, iron-sulphur subunit 5PFAMPF10200Ndufs5coord: 12..65
e-value: 9.8E-6
score: 25.7
IPR019342NADH:ubiquinone oxidoreductase, iron-sulphur subunit 5PANTHERPTHR15224NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 5coord: 1..82
NoneNo IPR availablePANTHERPTHR15224:SF5BNAC04G00180D PROTEINcoord: 1..82
NoneNo IPR availablePROSITEPS51808CHCHcoord: 11..52
score: 11.175484

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07406-RACarg07406-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032981 mitochondrial respiratory chain complex I assembly
cellular_component GO:0005747 mitochondrial respiratory chain complex I