Carg07305 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07305
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	homeobox-leucine zipper protein HOX11-like
Location	Carg_Chr01: 1013013 .. 1014636 (+)
RNA-Seq Expression	Carg07305
Synteny	Carg07305

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTGGGTTTGAGGCTTGGAGATCAACAACGAACCCACAGCCACAACCCTAAGCTTCTTCACCTCGCTCTTCTTCCTCCTACTCCTACTCCAGACGGCGGCGGTGGGGAATCTCCGAGAAACCCATATCTGTGCTCCTCGTTGGAGCTGGGATTGTATGAAGTGGAAGAGCATCAGGGAAATAGCGACAGAGGTTGCTCTAGAGGCAGCGATGAAGATGATCAAATTTTGGGTTCCAGAAAGAAACTGCGGCTTTCCAGAGAACAGTCGGCGTTCCTTGAAGACAGCTTCAAAGATCATCATACACTTTACCCTGTAAGACCCTCTCTTCTTCCTCTTCATTCAATCATATACATGTTCCATTATTGGTATAAGACGTCAGGGATCACGAATCTTCACAATGATATGTTATTGTCTACTTTCACCATAAGCTCGAGTGGCTCATATCAATAGAAATAATATTTCTTGGTTATAAACCGATGCTCATTCTCTTAATTAGCCCATGTGTAACTCTTCCAGCAATCCTCCTCTCGAACAAAGTATACCATAGAGTCTCCTCCAAGGGCTATGGAGCCATTGAGCCTCCTATAAGGTTTATGAAGCTCTTGAACAGCTTCTCTTTAATTGAAACTCGATTCCTTTCTCTAGAGCCATCAAGCAAAGTACACCCTCACCATAGAGCCTCTCCAAAGGTCTATGTAGTCCTCAAACAGCCTCCCTTTAATCGAGACTCGAATCTTTTCTCTAGAGCCATCGAGCAAAGTACACTCTCACCATAGAGCCTCTCGGGAGGCCTATGTAGCCCTCGAACAGCCTCCCTTTAATCGAGGTTCGACTCCTTTCTCTAGAGCCATCGAGCAAAGTACACCCTCACCATAGAGGCTCTATGGAGGCCTATGTAGCCCTCAAACTCCACAATAGTATCAAGCTTTTGGTTTCTAAAAGGCTTCATTACTTATAAACTCATGATCATTCCCTTAATTAGCCACGTGTGACTCTTCCCAACAATCTTCTCACTATTGTGAAGGGTCGTGATTCGTAACAATAGAACGAGTACTATTTAAAATAAATTTAAATTTAAAAAGTTTAAAAATTTATAAGAGATATGAAATAGCAGAAGCAAAAGGTAGAACTTGCAAGAAGGCTAAATCTCCGTCCACGCCAAGTAGAAGTGTGGTTTCAAAACAGACGAGCAAGGTGACCATCGCCATTATCTCTCTCTTTCTCATTATTTATTTATTTATTTATTTATTTACAGTGTTAACATTACAGAACCAAGCTGAAGCAAACCGAAGTTGACTGTGAGTACTTGAAAAACTGTTGCCAAACACTAACCCAACAAAACAGGAAGCTTCGAAAGGAGCTTCAAGATTTAAGAGCTTTGAAAACCACTGATTCTCTCTTCATGCATTCCCCCGCCACCACTCTCACCATGTGTGCGTCTTGTGAACGCGCCGCCGTTCTTCACCCGCTGAACTCCAAGGCTTCTGGGTTTTCGTTTACTACAAATGGGTCCTCTCCACAATAATTATTCACAACCTTTTTTTGTTCACTATTTCTATGTGAATTTTCAAGATTTATATATATTTTTTATTGCTATGATATTGAAATTTTGTTTATT

mRNA sequence

ATGGAGTTGGGTTTGAGGCTTGGAGATCAACAACGAACCCACAGCCACAACCCTAAGCTTCTTCACCTCGCTCTTCTTCCTCCTACTCCTACTCCAGACGGCGGCGGTGGGGAATCTCCGAGAAACCCATATCTGTGCTCCTCGTTGGAGCTGGGATTGTATGAAGTGGAAGAGCATCAGGGAAATAGCGACAGAGGTTGCTCTAGAGGCAGCGATGAAGATGATCAAATTTTGGGTTCCAGAAAGAAACTGCGGCTTTCCAGAGAACAGTCGGCGTTCCTTGAAGACAGCTTCAAAGATCATCATACACTTTACCCTAAGCAAAAGGTAGAACTTGCAAGAAGGCTAAATCTCCGTCCACGCCAAGTAGAAGTGTGGTTTCAAAACAGACGAGCAAGAACCAAGCTGAAGCAAACCGAAGTTGACTGTGAGTACTTGAAAAACTGTTGCCAAACACTAACCCAACAAAACAGGAAGCTTCGAAAGGAGCTTCAAGATTTAAGAGCTTTGAAAACCACTGATTCTCTCTTCATGCATTCCCCCGCCACCACTCTCACCATGTGTGCGTCTTGTGAACGCGCCGCCGTTCTTCACCCGCTGAACTCCAAGGCTTCTGGGTTTTCGTTTACTACAAATGGGTCCTCTCCACAATAATTATTCACAACCTTTTTTTGTTCACTATTTCTATGTGAATTTTCAAGATTTATATATATTTTTTATTGCTATGATATTGAAATTTTGTTTATT

Coding sequence (CDS)

ATGGAGTTGGGTTTGAGGCTTGGAGATCAACAACGAACCCACAGCCACAACCCTAAGCTTCTTCACCTCGCTCTTCTTCCTCCTACTCCTACTCCAGACGGCGGCGGTGGGGAATCTCCGAGAAACCCATATCTGTGCTCCTCGTTGGAGCTGGGATTGTATGAAGTGGAAGAGCATCAGGGAAATAGCGACAGAGGTTGCTCTAGAGGCAGCGATGAAGATGATCAAATTTTGGGTTCCAGAAAGAAACTGCGGCTTTCCAGAGAACAGTCGGCGTTCCTTGAAGACAGCTTCAAAGATCATCATACACTTTACCCTAAGCAAAAGGTAGAACTTGCAAGAAGGCTAAATCTCCGTCCACGCCAAGTAGAAGTGTGGTTTCAAAACAGACGAGCAAGAACCAAGCTGAAGCAAACCGAAGTTGACTGTGAGTACTTGAAAAACTGTTGCCAAACACTAACCCAACAAAACAGGAAGCTTCGAAAGGAGCTTCAAGATTTAAGAGCTTTGAAAACCACTGATTCTCTCTTCATGCATTCCCCCGCCACCACTCTCACCATGTGTGCGTCTTGTGAACGCGCCGCCGTTCTTCACCCGCTGAACTCCAAGGCTTCTGGGTTTTCGTTTACTACAAATGGGTCCTCTCCACAATAA

Protein sequence

MELGLRLGDQQRTHSHNPKLLHLALLPPTPTPDGGGGESPRNPYLCSSLELGLYEVEEHQGNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHSPATTLTMCASCERAAVLHPLNSKASGFSFTTNGSSPQ

Homology

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BLAST of Carg07305 vs. NCBI nr
Match: KAG7036566.1 (Homeobox-leucine zipper protein HOX11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 437.2 bits (1123), Expect = 8.3e-119
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MELGLRLGDQQRTHSHNPKLLHLALLPPTPTPDGGGGESPRNPYLCSSLELGLYEVEEHQ 60
           MELGLRLGDQQRTHSHNPKLLHLALLPPTPTPDGGGGESPRNPYLCSSLELGLYEVEEHQ
Sbjct: 1   MELGLRLGDQQRTHSHNPKLLHLALLPPTPTPDGGGGESPRNPYLCSSLELGLYEVEEHQ 60

Query: 61  GNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRP 120
           GNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRP
Sbjct: 61  GNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRP 120

Query: 121 RQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHS 180
           RQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHS
Sbjct: 121 RQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHS 180

Query: 181 PATTLTMCASCERAAVLHPLNSKASGFSFTTNGSSPQ 218
           PATTLTMCASCERAAVLHPLNSKASGFSFTTNGSSPQ
Sbjct: 181 PATTLTMCASCERAAVLHPLNSKASGFSFTTNGSSPQ 217

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BLAST of Carg07305 vs. NCBI nr
Match: KAG6606860.1 (Homeobox-leucine zipper protein HOX11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 434.9 bits (1117), Expect = 4.1e-118
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MELGLRLGDQQRTHSHNPKLLHLALLPPTPTPDGGGGESPRNPYLCSSLELGLYEVEEHQ 60
           MELGLRLGDQQ+THSHNPKLLHLALLPPTPTPDGGGGESPRNPYLCSSLELGLYEVEEHQ
Sbjct: 1   MELGLRLGDQQQTHSHNPKLLHLALLPPTPTPDGGGGESPRNPYLCSSLELGLYEVEEHQ 60

Query: 61  GNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRP 120
           GNSDRGCSRGSDEDDQI+GSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRP
Sbjct: 61  GNSDRGCSRGSDEDDQIMGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRP 120

Query: 121 RQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHS 180
           RQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHS
Sbjct: 121 RQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHS 180

Query: 181 PATTLTMCASCERAAVLHPLNSKASGFSFTTNGSSPQ 218
           PATTLTMCASCERAAVLHPLNSKASGFSFTTNGSSPQ
Sbjct: 181 PATTLTMCASCERAAVLHPLNSKASGFSFTTNGSSPQ 217

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BLAST of Carg07305 vs. NCBI nr
Match: XP_022949216.1 (homeobox-leucine zipper protein HOX11-like [Cucurbita moschata])

HSP 1 Score: 431.0 bits (1107), Expect = 6.0e-117
Identity = 216/218 (99.08%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MELGLRLGDQQRTHSHNPKLLHLALLPPTPTPDGGGGESPRNPYLCSSLELGLYEVEEHQ 60
           MELGLRLGDQQ+THSHNPKLLHLALLPPTPTPDGGGGESPRNPYLCSSLELGLYEVEEHQ
Sbjct: 1   MELGLRLGDQQQTHSHNPKLLHLALLPPTPTPDGGGGESPRNPYLCSSLELGLYEVEEHQ 60

Query: 61  GNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYP-KQKVELARRLNLR 120
           GNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYP KQKVELARRLNLR
Sbjct: 61  GNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPQKQKVELARRLNLR 120

Query: 121 PRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMH 180
           PRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMH
Sbjct: 121 PRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMH 180

Query: 181 SPATTLTMCASCERAAVLHPLNSKASGFSFTTNGSSPQ 218
           SPATTLTMCASCERAAVLHPLNSKASGFSFTTNGSSPQ
Sbjct: 181 SPATTLTMCASCERAAVLHPLNSKASGFSFTTNGSSPQ 218

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BLAST of Carg07305 vs. NCBI nr
Match: XP_023525421.1 (homeobox-leucine zipper protein HOX11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 415.6 bits (1067), Expect = 2.6e-112
Identity = 212/228 (92.98%), Postives = 215/228 (94.30%), Query Frame = 0


Query: 1   MELGLRLGDQQRTHSHNPKL----------LHLALLP--PTPTPDGGGGESPRNPYLCSS 60
           MELGLRLGDQQ+THSHNPKL          LHLALLP  PTPTPDGGGGESPRNPYLCSS
Sbjct: 1   MELGLRLGDQQQTHSHNPKLLPSFFHPPPILHLALLPPTPTPTPDGGGGESPRNPYLCSS 60

Query: 61  LELGLYEVEEHQGNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQ 120
           LELGLYEVE+HQGNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLE+SFKDHHTLYPKQ
Sbjct: 61  LELGLYEVEDHQGNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEESFKDHHTLYPKQ 120

Query: 121 KVELARRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLR 180
           KVELARRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLR
Sbjct: 121 KVELARRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLR 180

Query: 181 ALKTTDSLFMHSPATTLTMCASCERAAVLHPLNSKASGFSFTTNGSSP 217
           ALKTTDSLFMHSPATTLTMCASCERAAVLHPLNSKASGFSFTTNGS P
Sbjct: 181 ALKTTDSLFMHSPATTLTMCASCERAAVLHPLNSKASGFSFTTNGSFP 228

[Close]

BLAST of Carg07305 vs. NCBI nr
Match: XP_022998494.1 (homeobox-leucine zipper protein HOX11-like [Cucurbita maxima])

HSP 1 Score: 381.7 bits (979), Expect = 4.2e-102
Identity = 194/217 (89.40%), Postives = 206/217 (94.93%), Query Frame = 0


Query: 1   MELGLRLGDQQRTHSHNPKLLHLALLPPTPTPDGGGGESPRNPYLCSSLELGLYEVEE-H 60
           MELGLRLGDQQ+TH+HNPKLLHLALLPPTPTPDGGGG+   +P +CSSLELGLYEVE+ H
Sbjct: 1   MELGLRLGDQQQTHNHNPKLLHLALLPPTPTPDGGGGDG-ESPLVCSSLELGLYEVEDHH 60

Query: 61  QGNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYP-KQKVELARRLNL 120
           QGNSDRGCSRGSDEDDQILGSRKKLRL REQSAFLED FKDHHTL P KQK E+ARRLNL
Sbjct: 61  QGNSDRGCSRGSDEDDQILGSRKKLRLFREQSAFLEDCFKDHHTLDPQKQKAEVARRLNL 120

Query: 121 RPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFM 180
           RPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQ+NRKLRKELQDLRALKTTDSLFM
Sbjct: 121 RPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQENRKLRKELQDLRALKTTDSLFM 180

Query: 181 HSPATTLTMCASCERAAVLHPLNSKASGFSFTTNGSS 216
           HSPATTLTMCASCERAA++ P+NSKASGFSFT+NGSS
Sbjct: 181 HSPATTLTMCASCERAALIQPVNSKASGFSFTSNGSS 216

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BLAST of Carg07305 vs. ExPASy Swiss-Prot
Match: A2Z1U1 (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica OX=39946 GN=HOX11 PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.3e-50
Identity = 106/165 (64.24%), Postives = 126/165 (76.36%), Query Frame = 0


Query: 31  TPDGGGGESPRNPYLCSSLELGLYEVEEHQGNSDRGCSRGSDEDDQILGSRKKLRLSREQ 90
           +P+   G  P + +  S   LG  +     G  DR CSR SDEDD    +RKKLRLS+EQ
Sbjct: 42  SPNNSAGSFPMDDF--SGHGLGGNDAAPGGGGGDRSCSRASDEDDG-GSARKKLRLSKEQ 101

Query: 91  SAFLEDSFKDHHTLYPKQKVELARRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKNCC 150
           SAFLE+SFK+H TL PKQK+ LA++LNLRPRQVEVWFQNRRARTKLKQTEVDCEYLK CC
Sbjct: 102 SAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCC 161

Query: 151 QTLTQQNRKLRKELQDLRALKTTDSLFMHSPATTLTMCASCERAA 196
           +TLT++NR+L+KEL +LRALKT    +MH PATTL+MC SCER A
Sbjct: 162 ETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMCPSCERVA 203

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BLAST of Carg07305 vs. ExPASy Swiss-Prot
Match: Q67UE2 (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX11 PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.3e-50
Identity = 106/165 (64.24%), Postives = 126/165 (76.36%), Query Frame = 0


Query: 31  TPDGGGGESPRNPYLCSSLELGLYEVEEHQGNSDRGCSRGSDEDDQILGSRKKLRLSREQ 90
           +P+   G  P + +  S   LG  +     G  DR CSR SDEDD    +RKKLRLS+EQ
Sbjct: 129 SPNNSAGSFPMDDF--SGHGLGGNDAAPGGGGGDRSCSRASDEDDG-GSARKKLRLSKEQ 188

Query: 91  SAFLEDSFKDHHTLYPKQKVELARRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKNCC 150
           SAFLE+SFK+H TL PKQK+ LA++LNLRPRQVEVWFQNRRARTKLKQTEVDCEYLK CC
Sbjct: 189 SAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCC 248

Query: 151 QTLTQQNRKLRKELQDLRALKTTDSLFMHSPATTLTMCASCERAA 196
           +TLT++NR+L+KEL +LRALKT    +MH PATTL+MC SCER A
Sbjct: 249 ETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMCPSCERVA 290

[Close]

BLAST of Carg07305 vs. ExPASy Swiss-Prot
Match: A2YW03 (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica OX=39946 GN=HOX27 PE=2 SV=2)

HSP 1 Score: 191.0 bits (484), Expect = 1.4e-47
Identity = 101/156 (64.74%), Postives = 122/156 (78.21%), Query Frame = 0


Query: 61  GNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRP 120
           G  +R  SR SD DD+   +RKKLRLS+EQSAFLE+SFK+H TL PKQKV LA++LNLRP
Sbjct: 154 GGGERSSSRASD-DDEGASARKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRP 213

Query: 121 RQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHS 180
           RQVEVWFQNRRARTKLKQTEVDCEYLK CC+TLT++NR+L KEL +LRALKT    +MH 
Sbjct: 214 RQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELAELRALKTARPFYMHL 273

Query: 181 PATTLTMCASCERAAVLHPLNSKASGFSFTTNGSSP 217
           PATTL+MC SCER A      S ++  + T+  ++P
Sbjct: 274 PATTLSMCPSCERVASNPATASTSAPAAATSPAAAP 308

[Close]

BLAST of Carg07305 vs. ExPASy Swiss-Prot
Match: Q6YPD0 (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX27 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.4e-47
Identity = 101/156 (64.74%), Postives = 122/156 (78.21%), Query Frame = 0


Query: 61  GNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRP 120
           G  +R  SR SD DD+   +RKKLRLS+EQSAFLE+SFK+H TL PKQKV LA++LNLRP
Sbjct: 154 GGGERSSSRASD-DDEGASARKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRP 213

Query: 121 RQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHS 180
           RQVEVWFQNRRARTKLKQTEVDCEYLK CC+TLT++NR+L KEL +LRALKT    +MH 
Sbjct: 214 RQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELAELRALKTARPFYMHL 273

Query: 181 PATTLTMCASCERAAVLHPLNSKASGFSFTTNGSSP 217
           PATTL+MC SCER A      S ++  + T+  ++P
Sbjct: 274 PATTLSMCPSCERVASNPATASTSAPAAATSPAAAP 308

[Close]

BLAST of Carg07305 vs. ExPASy Swiss-Prot
Match: P46665 (Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana OX=3702 GN=HAT14 PE=2 SV=3)

HSP 1 Score: 185.7 bits (470), Expect = 5.7e-46
Identity = 98/157 (62.42%), Postives = 120/157 (76.43%), Query Frame = 0


Query: 64  DRGCSRGS--DEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRPR 123
           +R  SR S  D DD+   +RKKLRLS++QSAFLEDSFK+H TL PKQK+ LA++LNLRPR
Sbjct: 170 ERSASRASNEDNDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPR 229

Query: 124 QVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHSP 183
           QVEVWFQNRRARTKLKQTEVDCEYLK CC++LT++NR+L+KE+++LR LKT+   +M  P
Sbjct: 230 QVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKEVKELRTLKTSTPFYMQLP 289

Query: 184 ATTLTMCASCERAA--VLHPLNSKASGFSFTTNGSSP 217
           ATTLTMC SCER A     P  S A     +T+   P
Sbjct: 290 ATTLTMCPSCERVATSAAQPSTSAAHNLCLSTSSLIP 326

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BLAST of Carg07305 vs. ExPASy TrEMBL
Match: A0A6J1GBE1 (homeobox-leucine zipper protein HOX11-like OS=Cucurbita moschata OX=3662 GN=LOC111452633 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 2.9e-117
Identity = 216/218 (99.08%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MELGLRLGDQQRTHSHNPKLLHLALLPPTPTPDGGGGESPRNPYLCSSLELGLYEVEEHQ 60
           MELGLRLGDQQ+THSHNPKLLHLALLPPTPTPDGGGGESPRNPYLCSSLELGLYEVEEHQ
Sbjct: 1   MELGLRLGDQQQTHSHNPKLLHLALLPPTPTPDGGGGESPRNPYLCSSLELGLYEVEEHQ 60

Query: 61  GNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYP-KQKVELARRLNLR 120
           GNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYP KQKVELARRLNLR
Sbjct: 61  GNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPQKQKVELARRLNLR 120

Query: 121 PRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMH 180
           PRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMH
Sbjct: 121 PRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMH 180

Query: 181 SPATTLTMCASCERAAVLHPLNSKASGFSFTTNGSSPQ 218
           SPATTLTMCASCERAAVLHPLNSKASGFSFTTNGSSPQ
Sbjct: 181 SPATTLTMCASCERAAVLHPLNSKASGFSFTTNGSSPQ 218

[Close]

BLAST of Carg07305 vs. ExPASy TrEMBL
Match: A0A6J1KEH0 (homeobox-leucine zipper protein HOX11-like OS=Cucurbita maxima OX=3661 GN=LOC111493109 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.0e-102
Identity = 194/217 (89.40%), Postives = 206/217 (94.93%), Query Frame = 0


Query: 1   MELGLRLGDQQRTHSHNPKLLHLALLPPTPTPDGGGGESPRNPYLCSSLELGLYEVEE-H 60
           MELGLRLGDQQ+TH+HNPKLLHLALLPPTPTPDGGGG+   +P +CSSLELGLYEVE+ H
Sbjct: 1   MELGLRLGDQQQTHNHNPKLLHLALLPPTPTPDGGGGDG-ESPLVCSSLELGLYEVEDHH 60

Query: 61  QGNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYP-KQKVELARRLNL 120
           QGNSDRGCSRGSDEDDQILGSRKKLRL REQSAFLED FKDHHTL P KQK E+ARRLNL
Sbjct: 61  QGNSDRGCSRGSDEDDQILGSRKKLRLFREQSAFLEDCFKDHHTLDPQKQKAEVARRLNL 120

Query: 121 RPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFM 180
           RPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQ+NRKLRKELQDLRALKTTDSLFM
Sbjct: 121 RPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQENRKLRKELQDLRALKTTDSLFM 180

Query: 181 HSPATTLTMCASCERAAVLHPLNSKASGFSFTTNGSS 216
           HSPATTLTMCASCERAA++ P+NSKASGFSFT+NGSS
Sbjct: 181 HSPATTLTMCASCERAALIQPVNSKASGFSFTSNGSS 216

[Close]

BLAST of Carg07305 vs. ExPASy TrEMBL
Match: A0A1S3CFB9 (homeobox-leucine zipper protein HOX11-like OS=Cucumis melo OX=3656 GN=LOC103500287 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 6.8e-50
Identity = 125/219 (57.08%), Postives = 137/219 (62.56%), Query Frame = 0


Query: 5   LRLGDQQRTHSH-NPKLLHLALLPPTPTPDG-------------------------GGGE 64
           L L  Q R H H N  LLH    PP P                             GGGE
Sbjct: 29  LELQHQARNHIHQNHLLLHSLNSPPPPAASASRPSSPTERSRGKVFTEVISEATADGGGE 88

Query: 65  SPRNPYLCSSLELGL-YEVEEHQGNSDRGCSRGSDEDD--QILGSRKKLRLSREQSAFLE 124
             R         +G     EE +G S+       +E D   I G RKKLRLSR QSAFLE
Sbjct: 89  IGRRSSKGIVWSIGKNNSEEEREGKSENEEEEEQEEMDMNMISGGRKKLRLSRRQSAFLE 148

Query: 125 DSFKDHHTLYPKQKVELARRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQ 184
           +SFK HHTLYPKQK+E+ARRLNLRPRQVEVWFQNRRARTKLKQ EV+CEYLK CC TLTQ
Sbjct: 149 ESFKQHHTLYPKQKLEVARRLNLRPRQVEVWFQNRRARTKLKQNEVECEYLKKCCATLTQ 208

Query: 185 QNRKLRKELQDLRALKTTDSLFMHSPATTLTMCASCERA 195
           QN KL+KELQDLRALKTT SLF++SP TTLT+CASCERA
Sbjct: 209 QNTKLQKELQDLRALKTTHSLFINSPPTTLTLCASCERA 247

[Close]

BLAST of Carg07305 vs. ExPASy TrEMBL
Match: A0A7J9ASV0 (Homeobox domain-containing protein OS=Gossypium laxum OX=34288 GN=Golax_002362 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.5e-49
Identity = 118/219 (53.88%), Postives = 147/219 (67.12%), Query Frame = 0


Query: 8   GDQQRTHSHNPKLLHLALLPPTPTPDGGGGESPRNPYLCS-----SLELGL--------Y 67
           GD++R  S  P  L L LLP +P P        R P+L       S++ G+         
Sbjct: 56  GDEKRVSSDPP--LQLDLLPFSPVPRPQSSSQLRLPWLTDNRDAVSMDFGIRKGSRRGKK 115

Query: 68  EVEEHQGNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELAR 127
           EVE     ++R  +R SD+DD    +RKKLRLS+EQSAFLE+SFK+H TL PKQK+ LA+
Sbjct: 116 EVEVEAVETERTSTRASDDDDN-GSTRKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAK 175

Query: 128 RLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTD 187
           +LNLRPRQ+EVWFQNRRARTKLKQTEVDCEYLK CC+TL ++N++L+KELQ+LRALKT+ 
Sbjct: 176 QLNLRPRQIEVWFQNRRARTKLKQTEVDCEYLKRCCETLAEENKRLQKELQELRALKTSQ 235

Query: 188 SLFMHSPATTLTMCASCERAAVLHPLNSKASGFSFTTNG 214
             +M  PATTLTMC SCER A     N+ AS     T G
Sbjct: 236 PFYMQLPATTLTMCPSCERVATASTTNASASTADAKTGG 271

[Close]

BLAST of Carg07305 vs. ExPASy TrEMBL
Match: A0A6J1DGT2 (homeobox-leucine zipper protein HOX27-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020351 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 2.0e-49
Identity = 111/170 (65.29%), Postives = 126/170 (74.12%), Query Frame = 0


Query: 29  TPTPDGGGGESPRNPYLCSSLELGLYEVEEHQGNSDRGCSRGSDEDDQILGSRKKLRLSR 88
           T   +    E   NP L +SLE G         NS    S   +E++Q LG RKKLRLSR
Sbjct: 73  TDVSEAAAAEGGGNPLLSASLEYGGRAAATRPENS----SGDEEEEEQNLGLRKKLRLSR 132

Query: 89  EQSAFLEDSFKDHHTLYPKQKVELARRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKN 148
           EQSAFLE+SFK+HH+LYPKQKVELA+RLNLRPRQVEVWFQNRRARTKLKQTE +CEYLK 
Sbjct: 133 EQSAFLEESFKEHHSLYPKQKVELAKRLNLRPRQVEVWFQNRRARTKLKQTEEECEYLKK 192

Query: 149 CCQTLTQQNRKLRKELQDLRALKTTDSLFMHSPATTLTMCASCERAAVLH 199
            C+TL+Q N KL KEL DL+ALKTTDSLF H P TTLT+C SC+RAA  H
Sbjct: 193 WCETLSQHNTKLLKELTDLKALKTTDSLFFHLPPTTLTICTSCQRAAGKH 238

[Close]

BLAST of Carg07305 vs. TAIR 10
Match: AT5G06710.1 (homeobox from Arabidopsis thaliana )

HSP 1 Score: 185.7 bits (470), Expect = 4.1e-47
Identity = 98/157 (62.42%), Postives = 120/157 (76.43%), Query Frame = 0


Query: 64  DRGCSRGS--DEDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRPR 123
           +R  SR S  D DD+   +RKKLRLS++QSAFLEDSFK+H TL PKQK+ LA++LNLRPR
Sbjct: 170 ERSASRASNEDNDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPR 229

Query: 124 QVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHSP 183
           QVEVWFQNRRARTKLKQTEVDCEYLK CC++LT++NR+L+KE+++LR LKT+   +M  P
Sbjct: 230 QVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKEVKELRTLKTSTPFYMQLP 289

Query: 184 ATTLTMCASCERAA--VLHPLNSKASGFSFTTNGSSP 217
           ATTLTMC SCER A     P  S A     +T+   P
Sbjct: 290 ATTLTMCPSCERVATSAAQPSTSAAHNLCLSTSSLIP 326

[Close]

BLAST of Carg07305 vs. TAIR 10
Match: AT4G37790.1 (Homeobox-leucine zipper protein family )

HSP 1 Score: 179.1 bits (453), Expect = 3.8e-45
Identity = 94/140 (67.14%), Postives = 115/140 (82.14%), Query Frame = 0


Query: 57  EEHQGNSDR-GCSRGSD--EDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELA 116
           EE +  ++R  CSR SD  +D++ + +RKKLRL+++QSA LED+FK H TL PKQK  LA
Sbjct: 98  EEAEETTERVVCSRVSDDHDDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALA 157

Query: 117 RRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTT 176
           R+LNLRPRQVEVWFQNRRARTKLKQTEVDCE+LK CC+TLT +NR+L+KELQDL+ALK +
Sbjct: 158 RQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLKALKLS 217

Query: 177 DSLFMHSPATTLTMCASCER 194
              +MH PA TLTMC SCER
Sbjct: 218 QPFYMHMPAATLTMCPSCER 237

[Close]

BLAST of Carg07305 vs. TAIR 10
Match: AT2G22800.1 (Homeobox-leucine zipper protein family )

HSP 1 Score: 171.4 bits (433), Expect = 8.0e-43
Identity = 83/121 (68.60%), Postives = 102/121 (84.30%), Query Frame = 0


Query: 73  EDDQILGSRKKLRLSREQSAFLEDSFKDHHTLYPKQKVELARRLNLRPRQVEVWFQNRRA 132
           ED++ + +RKKLRL+++QSA LE+SFKDH TL PKQK  LAR+LNLRPRQVEVWFQNRRA
Sbjct: 104 EDEEGISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRA 163

Query: 133 RTKLKQTEVDCEYLKNCCQTLTQQNRKLRKELQDLRALKTTDSLFMHSPATTLTMCASCE 192
           RTKLKQTEVDCE+LK CC+TL  +N +L+KE+Q+L+ LK T   +MH PA+TLT C SCE
Sbjct: 164 RTKLKQTEVDCEFLKKCCETLADENIRLQKEIQELKTLKLTQPFYMHMPASTLTKCPSCE 223

Query: 193 R 194
           R
Sbjct: 224 R 224

[Close]

BLAST of Carg07305 vs. TAIR 10
Match: AT3G60390.1 (homeobox-leucine zipper protein 3 )

HSP 1 Score: 171.0 bits (432), Expect = 1.0e-42
Identity = 102/183 (55.74%), Postives = 123/183 (67.21%), Query Frame = 0


Query: 35  GGGESPRNPYLCSSLELGLYEVEEHQGNSDRGCSRGSDEDDQILGSRKKLRLSREQSAFL 94
           GGG    N    +S  LG        G SD     G+ +D     SRKKLRLS+EQ+  L
Sbjct: 127 GGGRVEDNEIERASCSLG--------GGSDDEDGSGNGDD----SSRKKLRLSKEQALVL 186

Query: 95  EDSFKDHHTLYPKQKVELARRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLT 154
           E++FK+H TL PKQK+ LA++LNLR RQVEVWFQNRRARTKLKQTEVDCEYLK CC+ LT
Sbjct: 187 EETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLT 246

Query: 155 QQNRKLRKELQDLRALKTTDSLFMH-SPATTLTMCASCERAAVLHPLNSKASGFSFTTNG 214
            +NR+L+KE+ +LRALK +  L+MH  P TTLTMC SCER AV    +S +S      N 
Sbjct: 247 DENRRLQKEVSELRALKLSPHLYMHMKPPTTLTMCPSCERVAV---TSSSSSVAPPVMNS 294

Query: 215 SSP 217
           SSP
Sbjct: 307 SSP 294

[Close]

BLAST of Carg07305 vs. TAIR 10
Match: AT4G16780.1 (homeobox protein 2 )

HSP 1 Score: 168.7 bits (426), Expect = 5.2e-42
Identity = 94/174 (54.02%), Postives = 120/174 (68.97%), Query Frame = 0


Query: 27  PPTPTPDGGGGESPRNPYLCSSLELGLYEVEEHQGNSDRGCSRGSDEDDQILGSRKKLRL 86
           PP+    G       +P    S   G  +  E + ++D   SRG  +D+    SRKKLRL
Sbjct: 76  PPSTAEYGDEDAGVSSPNSTVSSSTG--KRSEREEDTDPQGSRGISDDEDGDNSRKKLRL 135

Query: 87  SREQSAFLEDSFKDHHTLYPKQKVELARRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYL 146
           S++QSA LE++FKDH TL PKQK  LA++L LR RQVEVWFQNRRARTKLKQTEVDCE+L
Sbjct: 136 SKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFL 195

Query: 147 KNCCQTLTQQNRKLRKELQDLRALKTTDSLFMH-SPATTLTMCASCERAAVLHP 200
           + CC+ LT++NR+L+KE+ +LRALK +   +MH SP TTLTMC SCE  +V  P
Sbjct: 196 RRCCENLTEENRRLQKEVTELRALKLSPQFYMHMSPPTTLTMCPSCEHVSVPPP 247

The following BLAST results are available for this feature:

BLAST of Carg07305 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036566.1	8.3e-119	100.00	Homeobox-leucine zipper protein HOX11, partial [Cucurbita argyrosperma subsp. ar...	[more]
KAG6606860.1	4.1e-118	99.08	Homeobox-leucine zipper protein HOX11, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022949216.1	6.0e-117	99.08	homeobox-leucine zipper protein HOX11-like [Cucurbita moschata]	[more]
XP_023525421.1	2.6e-112	92.98	homeobox-leucine zipper protein HOX11-like [Cucurbita pepo subsp. pepo]	[more]
XP_022998494.1	4.2e-102	89.40	homeobox-leucine zipper protein HOX11-like [Cucurbita maxima]	[more]

BLAST of Carg07305 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2Z1U1	2.3e-50	64.24	Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q67UE2	2.3e-50	64.24	Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
A2YW03	1.4e-47	64.74	Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q6YPD0	1.4e-47	64.74	Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
P46665	5.7e-46	62.42	Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana OX=3702 GN=HAT14 P...	[more]

BLAST of Carg07305 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBE1	2.9e-117	99.08	homeobox-leucine zipper protein HOX11-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1KEH0	2.0e-102	89.40	homeobox-leucine zipper protein HOX11-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A1S3CFB9	6.8e-50	57.08	homeobox-leucine zipper protein HOX11-like OS=Cucumis melo OX=3656 GN=LOC1035002...	[more]
A0A7J9ASV0	1.5e-49	53.88	Homeobox domain-containing protein OS=Gossypium laxum OX=34288 GN=Golax_002362 P...	[more]
A0A6J1DGT2	2.0e-49	65.29	homeobox-leucine zipper protein HOX27-like isoform X1 OS=Momordica charantia OX=...	[more]

BLAST of Carg07305 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06710.1	4.1e-47	62.42	homeobox from Arabidopsis thaliana	[more]
AT4G37790.1	3.8e-45	67.14	Homeobox-leucine zipper protein family	[more]
AT2G22800.1	8.0e-43	68.60	Homeobox-leucine zipper protein family	[more]
AT3G60390.1	1.0e-42	55.74	homeobox-leucine zipper protein 3	[more]
AT4G16780.1	5.2e-42	54.02	homeobox protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 150..173
None	No IPR available	GENE3D	1.10.10.60		coord: 85..135 e-value: 4.3E-19 score: 69.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	PANTHER	PTHR45714	FAMILY NOT NAMED	coord: 56..212
None	No IPR available	PANTHER	PTHR45714:SF15	HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14	coord: 56..212
IPR003106	Leucine zipper, homeobox-associated	SMART	SM00340	halz	coord: 137..180 e-value: 3.6E-19 score: 79.7
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 137..171 e-value: 1.8E-8 score: 34.4
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 79..141 e-value: 3.0E-15 score: 66.7
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 81..135 e-value: 3.4E-15 score: 55.6
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 77..137 score: 16.276701
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 81..138 e-value: 4.54741E-15 score: 64.9572
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 112..135
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 74..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07305-RA	Carg07305-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding