Carg07201 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07201
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Glutaredoxin domain-containing protein
Location	Carg_Chr17: 8275777 .. 8276085 (+)
RNA-Seq Expression	Carg07201
Synteny	Carg07201

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAGATTGAGAAATTTGGCATCTCAGAAAGCAGTAGTGATTTTTTCCAAGAGCTCATGCTACATATGCCATAGCATCCAGACACTCTTTTATGAGCTTGGTGCAAGCCCTGCTATTCACGAGCTTGACCATGAAGCAAATGGGCGAGAAATTGATTGGGCTCTTAGAGGTCTAGGGTGCAACCCCTCTGTTCCAGCTGTGTTCATAGGAGGAAAATTTATAGGCTCAGCAAAAGATGTTATTTCTCTCCATGTTAATGGGGATCTGAAACAAATGCTGATAGATGCGAAGGCCATCTGGTTGTAA

mRNA sequence

ATGGATAGATTGAGAAATTTGGCATCTCAGAAAGCAGTAGTGATTTTTTCCAAGAGCTCATGCTACATATGCCATAGCATCCAGACACTCTTTTATGAGCTTGGTGCAAGCCCTGCTATTCACGAGCTTGACCATGAAGCAAATGGGCGAGAAATTGATTGGGCTCTTAGAGGTCTAGGGTGCAACCCCTCTGTTCCAGCTGTGTTCATAGGAGGAAAATTTATAGGCTCAGCAAAAGATGTTATTTCTCTCCATGTTAATGGGGATCTGAAACAAATGCTGATAGATGCGAAGGCCATCTGGTTGTAA

Coding sequence (CDS)

ATGGATAGATTGAGAAATTTGGCATCTCAGAAAGCAGTAGTGATTTTTTCCAAGAGCTCATGCTACATATGCCATAGCATCCAGACACTCTTTTATGAGCTTGGTGCAAGCCCTGCTATTCACGAGCTTGACCATGAAGCAAATGGGCGAGAAATTGATTGGGCTCTTAGAGGTCTAGGGTGCAACCCCTCTGTTCCAGCTGTGTTCATAGGAGGAAAATTTATAGGCTCAGCAAAAGATGTTATTTCTCTCCATGTTAATGGGGATCTGAAACAAATGCTGATAGATGCGAAGGCCATCTGGTTGTAA

Protein sequence

MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL

Homology

[Close]

BLAST of Carg07201 vs. NCBI nr
Match: XP_022954101.1 (glutaredoxin-C11-like [Cucurbita moschata] >XP_022992474.1 glutaredoxin-C11-like isoform X2 [Cucurbita maxima] >XP_023549403.1 glutaredoxin-C11-like [Cucurbita pepo subsp. pepo] >KAG6575856.1 Glutaredoxin-C11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014392.1 Glutaredoxin-C11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 211.5 bits (537), Expect = 3.5e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 102

[Close]

BLAST of Carg07201 vs. NCBI nr
Match: XP_038876720.1 (glutaredoxin-C11 [Benincasa hispida])

HSP 1 Score: 210.3 bits (534), Expect = 7.8e-51
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDH+ANGREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 102

[Close]

BLAST of Carg07201 vs. NCBI nr
Match: XP_008451630.1 (PREDICTED: glutaredoxin-C11 [Cucumis melo] >XP_031744239.1 glutaredoxin-C11 [Cucumis sativus] >KAA0068043.1 glutaredoxin-C11-like [Cucumis melo var. makuwa] >TYK18085.1 glutaredoxin-C11-like [Cucumis melo var. makuwa])

HSP 1 Score: 209.9 bits (533), Expect = 1.0e-50
Identity = 100/102 (98.04%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPA+HELDH+ANGREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 102

[Close]

BLAST of Carg07201 vs. NCBI nr
Match: KAE8646327.1 (hypothetical protein Csa_015602 [Cucumis sativus])

HSP 1 Score: 208.8 bits (530), Expect = 2.3e-50
Identity = 99/101 (98.02%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPA+HELDH+ANGREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 101

[Close]

BLAST of Carg07201 vs. NCBI nr
Match: XP_022146613.1 (glutaredoxin-C11 [Momordica charantia])

HSP 1 Score: 204.5 bits (519), Expect = 4.3e-49
Identity = 97/102 (95.10%), Postives = 100/102 (98.04%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MD LRNLASQKAVVIFSKSSCYICHS+QTLFYELG SPAIHELDHEANGREIDWALRGLG
Sbjct: 1   MDTLRNLASQKAVVIFSKSSCYICHSVQTLFYELGXSPAIHELDHEANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           CNPSVPAVFIGGKFIG++KDVISLHVNGDLKQMLIDAKAIWL
Sbjct: 61  CNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL 102

[Close]

BLAST of Carg07201 vs. ExPASy Swiss-Prot
Match: Q9LYC6 (Glutaredoxin-C11 OS=Arabidopsis thaliana OX=3702 GN=GRXC11 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 3.9e-37
Identity = 74/103 (71.84%), Postives = 91/103 (88.35%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           M+R+R+L+S+KA VIF+KSSC +CHSI+TLFYELGASPAIHELD +  GRE++ ALR LG
Sbjct: 1   MERIRDLSSKKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPEGREMERALRALG 60

Query: 61  -CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
             NP+VPAVF+GG++IGSAKD+IS HV+G LKQML DAKAIWL
Sbjct: 61  SSNPAVPAVFVGGRYIGSAKDIISFHVDGSLKQMLKDAKAIWL 103

[Close]

BLAST of Carg07201 vs. ExPASy Swiss-Prot
Match: O82254 (Putative glutaredoxin-C12 OS=Arabidopsis thaliana OX=3702 GN=GRXC12 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-33
Identity = 69/103 (66.99%), Postives = 87/103 (84.47%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWAL-RGL 60
           M+R+R+LAS+KA VIF+KSSC +CHSI+TLFYELGASPAIHELD +  G +++ AL R  
Sbjct: 1   MERVRDLASEKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPQGPDMERALFRVF 60

Query: 61  GCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           G NP+VPAVF+GG+++GSAKDVIS HV+G LKQML  + AIWL
Sbjct: 61  GSNPAVPAVFVGGRYVGSAKDVISFHVDGSLKQMLKASNAIWL 103

[Close]

BLAST of Carg07201 vs. ExPASy Swiss-Prot
Match: Q9LIF1 (Monothiol glutaredoxin-S10 OS=Arabidopsis thaliana OX=3702 GN=GRXS10 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 3.5e-30
Identity = 60/102 (58.82%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MD +  LASQ+AVVIFSKS+C + H+I+ LFYE G SPAI E+D +  G++I+WAL  LG
Sbjct: 1   MDVVARLASQRAVVIFSKSTCCMSHAIKRLFYEQGVSPAIVEIDQDMYGKDIEWALARLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           C+P+VPAVF+GGKF+G+A  V++LH+NG LK +L +A A+WL
Sbjct: 61  CSPTVPAVFVGGKFVGTANTVMTLHLNGSLKILLKEAGALWL 102

[Close]

BLAST of Carg07201 vs. ExPASy Swiss-Prot
Match: O23421 (Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana OX=3702 GN=GRXS3 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.5e-25
Identity = 54/102 (52.94%), Postives = 76/102 (74.51%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           M+ L+ + S+K+VVIFSK+SC + H+I+TLF +LG +P I+ELD  + G+EI+ AL  LG
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           C+P+VP VFIGG+ +G A  V+SLH+N  L  ML  A A+WL
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Carg07201 vs. ExPASy Swiss-Prot
Match: O23419 (Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana OX=3702 GN=GRXS4 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 5.8e-25
Identity = 53/102 (51.96%), Postives = 74/102 (72.55%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MD+L+ + S+K+VVIFSK+SC + H+I+TLF + G +P I+ELD    G+EI+ AL  LG
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           C+P+VP VFIGG+ +G A  V+SLH+N  L  ML    A+WL
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]

BLAST of Carg07201 vs. ExPASy TrEMBL
Match: A0A6J1JXM7 (glutaredoxin-C11-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488793 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.7e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 102

[Close]

BLAST of Carg07201 vs. ExPASy TrEMBL
Match: A0A6J1GPY2 (glutaredoxin-C11-like OS=Cucurbita moschata OX=3662 GN=LOC111456468 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.7e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 102

[Close]

BLAST of Carg07201 vs. ExPASy TrEMBL
Match: A0A5A7VIX0 (Glutaredoxin-C11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00060 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 4.9e-51
Identity = 100/102 (98.04%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPA+HELDH+ANGREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 102

[Close]

BLAST of Carg07201 vs. ExPASy TrEMBL
Match: A0A0A0K7M4 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G394580 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 4.9e-51
Identity = 100/102 (98.04%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPA+HELDH+ANGREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 102

[Close]

BLAST of Carg07201 vs. ExPASy TrEMBL
Match: A0A1S3BRC8 (glutaredoxin-C11 OS=Cucumis melo OX=3656 GN=LOC103492861 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 4.9e-51
Identity = 100/102 (98.04%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPA+HELDH+ANGREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 102

[Close]

BLAST of Carg07201 vs. TAIR 10
Match: AT3G62950.1 (Thioredoxin superfamily protein )

HSP 1 Score: 155.2 bits (391), Expect = 2.8e-38
Identity = 74/103 (71.84%), Postives = 91/103 (88.35%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           M+R+R+L+S+KA VIF+KSSC +CHSI+TLFYELGASPAIHELD +  GRE++ ALR LG
Sbjct: 1   MERIRDLSSKKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPEGREMERALRALG 60

Query: 61  -CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
             NP+VPAVF+GG++IGSAKD+IS HV+G LKQML DAKAIWL
Sbjct: 61  SSNPAVPAVFVGGRYIGSAKDIISFHVDGSLKQMLKDAKAIWL 103

[Close]

BLAST of Carg07201 vs. TAIR 10
Match: AT2G47870.1 (Thioredoxin superfamily protein )

HSP 1 Score: 143.7 bits (361), Expect = 8.4e-35
Identity = 69/103 (66.99%), Postives = 87/103 (84.47%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWAL-RGL 60
           M+R+R+LAS+KA VIF+KSSC +CHSI+TLFYELGASPAIHELD +  G +++ AL R  
Sbjct: 1   MERVRDLASEKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPQGPDMERALFRVF 60

Query: 61  GCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           G NP+VPAVF+GG+++GSAKDVIS HV+G LKQML  + AIWL
Sbjct: 61  GSNPAVPAVFVGGRYVGSAKDVISFHVDGSLKQMLKASNAIWL 103

[Close]

BLAST of Carg07201 vs. TAIR 10
Match: AT3G21460.1 (Glutaredoxin family protein )

HSP 1 Score: 132.1 bits (331), Expect = 2.5e-31
Identity = 60/102 (58.82%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MD +  LASQ+AVVIFSKS+C + H+I+ LFYE G SPAI E+D +  G++I+WAL  LG
Sbjct: 1   MDVVARLASQRAVVIFSKSTCCMSHAIKRLFYEQGVSPAIVEIDQDMYGKDIEWALARLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           C+P+VPAVF+GGKF+G+A  V++LH+NG LK +L +A A+WL
Sbjct: 61  CSPTVPAVFVGGKFVGTANTVMTLHLNGSLKILLKEAGALWL 102

[Close]

BLAST of Carg07201 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 1.1e-26
Identity = 54/102 (52.94%), Postives = 76/102 (74.51%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           M+ L+ + S+K+VVIFSK+SC + H+I+TLF +LG +P I+ELD  + G+EI+ AL  LG
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           C+P+VP VFIGG+ +G A  V+SLH+N  L  ML  A A+WL
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Carg07201 vs. TAIR 10
Match: AT4G15680.1 (Thioredoxin superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 4.2e-26
Identity = 53/102 (51.96%), Postives = 74/102 (72.55%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60
           MD+L+ + S+K+VVIFSK+SC + H+I+TLF + G +P I+ELD    G+EI+ AL  LG
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           C+P+VP VFIGG+ +G A  V+SLH+N  L  ML    A+WL
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

The following BLAST results are available for this feature:

BLAST of Carg07201 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954101.1	3.5e-51	100.00	glutaredoxin-C11-like [Cucurbita moschata] >XP_022992474.1 glutaredoxin-C11-like...	[more]
XP_038876720.1	7.8e-51	99.02	glutaredoxin-C11 [Benincasa hispida]	[more]
XP_008451630.1	1.0e-50	98.04	PREDICTED: glutaredoxin-C11 [Cucumis melo] >XP_031744239.1 glutaredoxin-C11 [Cuc...	[more]
KAE8646327.1	2.3e-50	98.02	hypothetical protein Csa_015602 [Cucumis sativus]	[more]
XP_022146613.1	4.3e-49	95.10	glutaredoxin-C11 [Momordica charantia]	[more]

BLAST of Carg07201 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LYC6	3.9e-37	71.84	Glutaredoxin-C11 OS=Arabidopsis thaliana OX=3702 GN=GRXC11 PE=3 SV=1	[more]
O82254	1.2e-33	66.99	Putative glutaredoxin-C12 OS=Arabidopsis thaliana OX=3702 GN=GRXC12 PE=3 SV=1	[more]
Q9LIF1	3.5e-30	58.82	Monothiol glutaredoxin-S10 OS=Arabidopsis thaliana OX=3702 GN=GRXS10 PE=3 SV=1	[more]
O23421	1.5e-25	52.94	Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana OX=3702 GN=GRXS3 PE=3 SV=1	[more]
O23419	5.8e-25	51.96	Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana OX=3702 GN=GRXS4 PE=3 SV=1	[more]

BLAST of Carg07201 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JXM7	1.7e-51	100.00	glutaredoxin-C11-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488793 PE=...	[more]
A0A6J1GPY2	1.7e-51	100.00	glutaredoxin-C11-like OS=Cucurbita moschata OX=3662 GN=LOC111456468 PE=3 SV=1	[more]
A0A5A7VIX0	4.9e-51	98.04	Glutaredoxin-C11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold41...	[more]
A0A0A0K7M4	4.9e-51	98.04	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G39458...	[more]
A0A1S3BRC8	4.9e-51	98.04	glutaredoxin-C11 OS=Cucumis melo OX=3656 GN=LOC103492861 PE=3 SV=1	[more]

BLAST of Carg07201 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62950.1	2.8e-38	71.84	Thioredoxin superfamily protein	[more]
AT2G47870.1	8.4e-35	66.99	Thioredoxin superfamily protein	[more]
AT3G21460.1	2.5e-31	58.82	Glutaredoxin family protein	[more]
AT4G15700.1	1.1e-26	52.94	Thioredoxin superfamily protein	[more]
AT4G15680.1	4.2e-26	51.96	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 72..85 score: 31.85 coord: 13..31 score: 35.31 coord: 58..71 score: 34.23
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..101 e-value: 1.4E-25 score: 91.1
None	No IPR available	PANTHER	PTHR10168:SF202	GLUTAREDOXIN-C1 PROTEIN	coord: 1..101
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 1..101 score: 19.844744
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 12..93 e-value: 5.19063E-36 score: 115.715
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 13..75 e-value: 1.2E-9 score: 38.2
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 5..102 e-value: 2.7E-38 score: 127.9
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 1..101
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 1..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07201-RA	Carg07201-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0097573	glutathione oxidoreductase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity