Carg07187 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg07187
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionpentatricopeptide repeat-containing protein At5g56310-like
LocationCarg_Chr17: 8190306 .. 8191706 (+)
RNA-Seq ExpressionCarg07187
SyntenyCarg07187
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCTTTTGGCGTACAAATGTGGGCTGAATCAAACAGGATTCTCTCCCTTTTCGCCACTTCTCTGTCTCCGATTCACATCCCTCAAATTCAAGCTCAGCTCATCGTTCAAAACCTCCATTCAAATCCCACCATTGCCCACCATTTCATAAACACTTGCCATGATCTTCGACTTCTCGATTCTGCTCTTCGCTTCTTTACTCAAATCCCCAAACCCCACGTCTTCGTCTGCAATTCCTTAATCAGAGCCTTCTCCCACTCCAAAATCCCCCGTACCCCTCTTTCCATTTACGCCCACATGAACAGAAACTCCATTCTTCCCAATAATTACACCTTTCCTTTCCTTCTCAAATCCTTGGCTGATTTCAACCACCTTGTGAGTGGACAATCTGTTCATGCCCACGTTGTGAAATTGGGCTATGTTTCTGATGTTTATGTGCAGAATTCGTTGATGGATGTTTATGCGTCGTGTGGGAGAATGGGGTTATGCAAGAAGGTGTTCGACGAAATGCCTCTGAGAGATGTTGTGTCGTGGACTGTTTTGATTATGGGTTATCGAGTTGCTTTGATGTTTGATGATGCTTTGATTGCGTTTGAGCAGATGCAATATGCAGGTGTGGAGCCTAATCGTGTGACGATGGTTAATGCATTGGCTGCCTGTGCAAGCTTTGGAGCCATTGAAATGGGTGTTTGGATACATGAGTTTGTGAAAAGGAGAGGGTGGGAAATGGATGTGATTTTGGGGACTTCTTTGATTGATATGTATGGGAAATGTGGAAGAATCGAGGAGGGATTGGTTGTTTTCCAAGCCATGAAAGACAAGAATGTGTATACATGGAATGCACTCATTAACGGGCTGGCATTGGCCAAAAGCGGAGAGGAGGCCATTGCTTGGTTTAAGAGAATGAACGAAGAAGGCGGCATTGAGGCAGATGAAGTGACATTAGTGGCAGTGCTTTGTGCTTGTAGCCACTCTGGCTTGGTGGACATCGGCAGGCAGATCTTCGGGTCGATGATTGACGGTAAGTTCGGGTTTTCACCAGGAATCCAACACTATTCATGTATGGTTGATCTCCTGGCTCGTTCTGGGTGTATTGAGGAGTCCTTTGAATTGATTAAGAATATGCCTTTTGATGCCACCAAAGCAATGTGGGGGTCTTTGCTAGCTGGTAGCAGAGCTCAAGGGAGCTTGGAAATGAGCGAATTTGCAGCACGGAAGCTTGTAGAAATGGAACCAGAGAATGGTGCTTATTATGCTGTTTTATCCAATATCTGTGCAGAGATGGGGAAATGGAATGAGGTTGAGAAAGTGAGAGAGATCATGAAAGTGGAAGGACTGAAGAAGGATCTGGGGTCGAGTTCTGTTGAGAGCTTCAAGAGGCTGCCCCATTTCCCATGA

mRNA sequence

ATGGCAGCTTTTGGCGTACAAATGTGGGCTGAATCAAACAGGATTCTCTCCCTTTTCGCCACTTCTCTGTCTCCGATTCACATCCCTCAAATTCAAGCTCAGCTCATCGTTCAAAACCTCCATTCAAATCCCACCATTGCCCACCATTTCATAAACACTTGCCATGATCTTCGACTTCTCGATTCTGCTCTTCGCTTCTTTACTCAAATCCCCAAACCCCACGTCTTCGTCTGCAATTCCTTAATCAGAGCCTTCTCCCACTCCAAAATCCCCCGTACCCCTCTTTCCATTTACGCCCACATGAACAGAAACTCCATTCTTCCCAATAATTACACCTTTCCTTTCCTTCTCAAATCCTTGGCTGATTTCAACCACCTTGTGAGTGGACAATCTGTTCATGCCCACGTTGTGAAATTGGGCTATGTTTCTGATGTTTATGTGCAGAATTCGTTGATGGATGTTTATGCGTCGTGTGGGAGAATGGGGTTATGCAAGAAGGTGTTCGACGAAATGCCTCTGAGAGATGTTGTGTCGTGGACTGTTTTGATTATGGGTTATCGAGTTGCTTTGATGTTTGATGATGCTTTGATTGCGTTTGAGCAGATGCAATATGCAGGTGTGGAGCCTAATCGTGTGACGATGGTTAATGCATTGGCTGCCTGTGCAAGCTTTGGAGCCATTGAAATGGGTGTTTGGATACATGAGTTTGTGAAAAGGAGAGGGTGGGAAATGGATGTGATTTTGGGGACTTCTTTGATTGATATGTATGGGAAATGTGGAAGAATCGAGGAGGGATTGGTTGTTTTCCAAGCCATGAAAGACAAGAATGTGTATACATGGAATGCACTCATTAACGGGCTGGCATTGGCCAAAAGCGGAGAGGAGGCCATTGCTTGGTTTAAGAGAATGAACGAAGAAGGCGGCATTGAGGCAGATGAAGTGACATTAGTGGCAGTGCTTTGTGCTTGTAGCCACTCTGGCTTGGTGGACATCGGCAGGCAGATCTTCGGGTCGATGATTGACGGTAAGTTCGGGTTTTCACCAGGAATCCAACACTATTCATGTATGGTTGATCTCCTGGCTCGTTCTGGGTGTATTGAGGAGTCCTTTGAATTGATTAAGAATATGCCTTTTGATGCCACCAAAGCAATGTGGGGGTCTTTGCTAGCTGGTAGCAGAGCTCAAGGGAGCTTGGAAATGAGCGAATTTGCAGCACGGAAGCTTGTAGAAATGGAACCAGAGAATGGTGCTTATTATGCTGTTTTATCCAATATCTGTGCAGAGATGGGGAAATGGAATGAGGTTGAGAAAGTGAGAGAGATCATGAAAGTGGAAGGACTGAAGAAGGATCTGGGGTCGAGTTCTGTTGAGAGCTTCAAGAGGCTGCCCCATTTCCCATGA

Coding sequence (CDS)

ATGGCAGCTTTTGGCGTACAAATGTGGGCTGAATCAAACAGGATTCTCTCCCTTTTCGCCACTTCTCTGTCTCCGATTCACATCCCTCAAATTCAAGCTCAGCTCATCGTTCAAAACCTCCATTCAAATCCCACCATTGCCCACCATTTCATAAACACTTGCCATGATCTTCGACTTCTCGATTCTGCTCTTCGCTTCTTTACTCAAATCCCCAAACCCCACGTCTTCGTCTGCAATTCCTTAATCAGAGCCTTCTCCCACTCCAAAATCCCCCGTACCCCTCTTTCCATTTACGCCCACATGAACAGAAACTCCATTCTTCCCAATAATTACACCTTTCCTTTCCTTCTCAAATCCTTGGCTGATTTCAACCACCTTGTGAGTGGACAATCTGTTCATGCCCACGTTGTGAAATTGGGCTATGTTTCTGATGTTTATGTGCAGAATTCGTTGATGGATGTTTATGCGTCGTGTGGGAGAATGGGGTTATGCAAGAAGGTGTTCGACGAAATGCCTCTGAGAGATGTTGTGTCGTGGACTGTTTTGATTATGGGTTATCGAGTTGCTTTGATGTTTGATGATGCTTTGATTGCGTTTGAGCAGATGCAATATGCAGGTGTGGAGCCTAATCGTGTGACGATGGTTAATGCATTGGCTGCCTGTGCAAGCTTTGGAGCCATTGAAATGGGTGTTTGGATACATGAGTTTGTGAAAAGGAGAGGGTGGGAAATGGATGTGATTTTGGGGACTTCTTTGATTGATATGTATGGGAAATGTGGAAGAATCGAGGAGGGATTGGTTGTTTTCCAAGCCATGAAAGACAAGAATGTGTATACATGGAATGCACTCATTAACGGGCTGGCATTGGCCAAAAGCGGAGAGGAGGCCATTGCTTGGTTTAAGAGAATGAACGAAGAAGGCGGCATTGAGGCAGATGAAGTGACATTAGTGGCAGTGCTTTGTGCTTGTAGCCACTCTGGCTTGGTGGACATCGGCAGGCAGATCTTCGGGTCGATGATTGACGGTAAGTTCGGGTTTTCACCAGGAATCCAACACTATTCATGTATGGTTGATCTCCTGGCTCGTTCTGGGTGTATTGAGGAGTCCTTTGAATTGATTAAGAATATGCCTTTTGATGCCACCAAAGCAATGTGGGGGTCTTTGCTAGCTGGTAGCAGAGCTCAAGGGAGCTTGGAAATGAGCGAATTTGCAGCACGGAAGCTTGTAGAAATGGAACCAGAGAATGGTGCTTATTATGCTGTTTTATCCAATATCTGTGCAGAGATGGGGAAATGGAATGAGGTTGAGAAAGTGAGAGAGATCATGAAAGTGGAAGGACTGAAGAAGGATCTGGGGTCGAGTTCTGTTGAGAGCTTCAAGAGGCTGCCCCATTTCCCATGA

Protein sequence

MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLLDSALRFFTQIPKPHVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSLADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWTVLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKRRGWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWFKRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLLARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYAVLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVESFKRLPHFP
Homology
[Close]
BLAST of Carg07187 vs. NCBI nr
Match: KAG6575842.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014378.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 944.9 bits (2441), Expect = 2.6e-271
Identity = 466/466 (100.00%), Postives = 466/466 (100.00%), Query Frame = 0 

Query: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL 60
           MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL
Sbjct: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL 60

Query: 61  DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSL 120
           DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSL
Sbjct: 61  DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSL 120

Query: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180
           ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT
Sbjct: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKRR 240
           VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKRR
Sbjct: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKRR 240

Query: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300
           GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF
Sbjct: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300

Query: 301 KRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360
           KRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL
Sbjct: 301 KRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360

Query: 361 ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYA 420
           ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYA
Sbjct: 361 ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYA 420

Query: 421 VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVESFKRLPHFP 467
           VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVESFKRLPHFP
Sbjct: 421 VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVESFKRLPHFP 466

[Close]
BLAST of Carg07187 vs. NCBI nr
Match: XP_022953836.1 (pentatricopeptide repeat-containing protein At5g56310-like [Cucurbita moschata])

HSP 1 Score: 937.6 bits (2422), Expect = 4.2e-269
Identity = 464/466 (99.57%), Postives = 464/466 (99.57%), Query Frame = 0 

Query: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL 60
           MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL
Sbjct: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL 60

Query: 61  DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSL 120
           DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSL
Sbjct: 61  DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSL 120

Query: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180
           ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT
Sbjct: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKRR 240
           VLIMGYRVALMFDDALIAFEQMQYAGV PNRVTMVNALAACASFGAIEMGVWIHEFVKRR
Sbjct: 181 VLIMGYRVALMFDDALIAFEQMQYAGVVPNRVTMVNALAACASFGAIEMGVWIHEFVKRR 240

Query: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300
           GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF
Sbjct: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300

Query: 301 KRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360
           KRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL
Sbjct: 301 KRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360

Query: 361 ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYA 420
           ARSG IEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYA
Sbjct: 361 ARSGRIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYA 420

Query: 421 VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVESFKRLPHFP 467
           VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVESFKRLPHFP
Sbjct: 421 VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVESFKRLPHFP 466

[Close]
BLAST of Carg07187 vs. NCBI nr
Match: XP_023548659.1 (pentatricopeptide repeat-containing protein At5g56310-like [Cucurbita pepo subsp. pepo] >XP_023548660.1 pentatricopeptide repeat-containing protein At5g56310-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 931.0 bits (2405), Expect = 4.0e-267
Identity = 457/466 (98.07%), Postives = 463/466 (99.36%), Query Frame = 0 

Query: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL 60
           MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL
Sbjct: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL 60

Query: 61  DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSL 120
           DSAL FFTQIPKPHVFVCNSLIRAFSHSKIP TPLSIYAHMNRNSILPNNYTFPFLLKSL
Sbjct: 61  DSALLFFTQIPKPHVFVCNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKSL 120

Query: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180
           ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT
Sbjct: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKRR 240
           VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMG+WIHEFVKRR
Sbjct: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGIWIHEFVKRR 240

Query: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300
           GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF
Sbjct: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300

Query: 301 KRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360
           KRM+E+GG++ADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL
Sbjct: 301 KRMDEDGGVKADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360

Query: 361 ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYA 420
           ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYA
Sbjct: 361 ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYA 420

Query: 421 VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVESFKRLPHFP 467
           VLSNICAEMGKWNEVEKVR+IMKVEGLKKDLGSSSVESFK LPHFP
Sbjct: 421 VLSNICAEMGKWNEVEKVRKIMKVEGLKKDLGSSSVESFKSLPHFP 466

[Close]
BLAST of Carg07187 vs. NCBI nr
Match: XP_022991568.1 (pentatricopeptide repeat-containing protein At5g56310-like [Cucurbita maxima])

HSP 1 Score: 927.5 bits (2396), Expect = 4.4e-266
Identity = 457/466 (98.07%), Postives = 460/466 (98.71%), Query Frame = 0 

Query: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL 60
           MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCH LRLL
Sbjct: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHHLRLL 60

Query: 61  DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSL 120
           DSALRFFTQIPKPHVFVCNSLIRAFSHSKIP TPLSIYAHMNR SILPNNYTFPFLLKSL
Sbjct: 61  DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPHTPLSIYAHMNRTSILPNNYTFPFLLKSL 120

Query: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180
           ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT
Sbjct: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKRR 240
           VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIH FVKRR
Sbjct: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHAFVKRR 240

Query: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300
           GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF
Sbjct: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300

Query: 301 KRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360
           KRM+E GG+EADEVTLV VLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL
Sbjct: 301 KRMDEGGGVEADEVTLVTVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360

Query: 361 ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYA 420
           ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLE+SEFAARKLVEMEPENGAYYA
Sbjct: 361 ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEISEFAARKLVEMEPENGAYYA 420

Query: 421 VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVESFKRLPHFP 467
           VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVESFKRLPHFP
Sbjct: 421 VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVESFKRLPHFP 466

[Close]
BLAST of Carg07187 vs. NCBI nr
Match: XP_038898992.1 (pentatricopeptide repeat-containing protein At5g56310-like [Benincasa hispida])

HSP 1 Score: 805.8 bits (2080), Expect = 1.9e-229
Identity = 397/457 (86.87%), Postives = 422/457 (92.34%), Query Frame = 0 

Query: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL 60
           M  F  Q  AESNRILS+F TSLSPIHIPQIQAQLI+QNLHSNPTIAHHFINTCH L+LL
Sbjct: 1   MTPFTAQFRAESNRILSVFTTSLSPIHIPQIQAQLILQNLHSNPTIAHHFINTCHHLQLL 60

Query: 61  DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSL 120
           DSAL FF  IPKPHVFVCNSLIRAFSHSKIP TPLSIY HMNRNSI PNNYTFPFLLKSL
Sbjct: 61  DSALLFFNHIPKPHVFVCNSLIRAFSHSKIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL 120

Query: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180
           ADFN LVSGQSVH HV+KLGYV+DVYVQNSLMDVYASCG+MGLCKKVFDEMP RDVVSWT
Sbjct: 121 ADFNDLVSGQSVHTHVLKLGYVADVYVQNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKRR 240
           VLIMGYRV+LMFDDALIAFEQMQYAGVEPNRVTMVNALAACA+FGAIEMGVWIHEFVKR+
Sbjct: 181 VLIMGYRVSLMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK 240

Query: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300
           GWEMDVILGTSLIDMYGKCGRI+EGLVVFQAMK+KNVYTWNALI GLALAKSGEEAIAWF
Sbjct: 241 GWEMDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF 300

Query: 301 KRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360
            RM+EE G+E DEVTLVAVLCACSHSGLVD+G+QIF S+ D +FGFSPGI+HYSCMVDLL
Sbjct: 301 NRMDEE-GVEPDEVTLVAVLCACSHSGLVDMGKQIFQSLTDRRFGFSPGIKHYSCMVDLL 360

Query: 361 ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYA 420
           AR GCIE +F LIK+MPF+ATKAMWGSLLAGSRA G LE+SE AA+KLVEMEPENGAYY 
Sbjct: 361 ARYGCIEAAFVLIKDMPFEATKAMWGSLLAGSRAHGGLEVSEIAAKKLVEMEPENGAYYV 420

Query: 421 VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVE 458
           VLSNI AEM KW+EVEKVRE+MK  GLKKDLGSSSVE
Sbjct: 421 VLSNIYAEMEKWSEVEKVREMMKERGLKKDLGSSSVE 456

[Close]
BLAST of Carg07187 vs. ExPASy Swiss-Prot
Match: Q9FMA1 (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 8.7e-84
Identity = 178/492 (36.18%), Postives = 269/492 (54.67%), Query Frame = 0 

Query: 16  LSLFATSLSPIH------IPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLLDSALRFFTQ 75
           L+ F TSL  IH      + Q    +I+  L+ +      FI  C +   L  A   FT 
Sbjct: 14  LNWFVTSLK-IHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTH 73

Query: 76  IPKPHVFVCNSLIRAFSHSKIPRT---PLSIYAHMNRNSILPNNYTFPFLLKSLADFNHL 135
            P P+ ++ N++IRA S    P      +++Y  +      P+ +TFPF+LK     + +
Sbjct: 74  QPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDV 133

Query: 136 VSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDV---------- 195
             G+ +H  VV  G+ S V+V   L+ +Y SCG +G  +K+FDEM ++DV          
Sbjct: 134 WFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGY 193

Query: 196 -----------------------VSWTVLIMGYRVALMFDDALIAFEQMQYAGVEPNRVT 255
                                  VSWT +I GY  +    +A+  F++M    VEP+ VT
Sbjct: 194 GKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVT 253

Query: 256 MVNALAACASFGAIEMGVWIHEFVKRRGWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMK 315
           ++  L+ACA  G++E+G  I  +V  RG    V L  ++IDMY K G I + L VF+ + 
Sbjct: 254 LLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVN 313

Query: 316 DKNVYTWNALINGLALAKSGEEAIAWFKRMNEEGGIEADEVTLVAVLCACSHSGLVDIGR 375
           ++NV TW  +I GLA    G EA+A F RM  + G+  ++VT +A+L ACSH G VD+G+
Sbjct: 314 ERNVVTWTTIIAGLATHGHGAEALAMFNRM-VKAGVRPNDVTFIAILSACSHVGWVDLGK 373

Query: 376 QIFGSMIDGKFGFSPGIQHYSCMVDLLARSGCIEESFELIKNMPFDATKAMWGSLLAGSR 435
           ++F SM   K+G  P I+HY CM+DLL R+G + E+ E+IK+MPF A  A+WGSLLA S 
Sbjct: 374 RLFNSM-RSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASN 433

Query: 436 AQGSLEMSEFAARKLVEMEPENGAYYAVLSNICAEMGKWNEVEKVREIMKVEGLKKDLGS 466
               LE+ E A  +L+++EP N   Y +L+N+ + +G+W+E   +R +MK  G+KK  G 
Sbjct: 434 VHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGE 493

[Close]
BLAST of Carg07187 vs. ExPASy Swiss-Prot
Match: O80488 (Pentatricopeptide repeat-containing protein At1g09190 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E70 PE=2 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 3.4e-80
Identity = 170/475 (35.79%), Postives = 262/475 (55.16%), Query Frame = 0 

Query: 14  RILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLLDSALRFFTQIPKP 73
           ++L L     +   +P+I A L+   LH +  +  HFI+ C  L   D A R F+ I  P
Sbjct: 6   KLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNP 65

Query: 74  HVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSLADFNHLVSGQSVH 133
           +V V N++I+ +S    P   LS ++ M    I  + YT+  LLKS +  + L  G+ VH
Sbjct: 66  NVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVH 125

Query: 134 AHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWTVLIMGY------- 193
             +++ G+     ++  ++++Y S GRMG  +KVFDEM  R+VV W ++I G+       
Sbjct: 126 GELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVE 185

Query: 194 RVALMFD------------------------DALIAFEQMQYAGVEPNRVTMVNALAACA 253
           R   +F                         +AL  F +M   G +P+  T+V  L   A
Sbjct: 186 RGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISA 245

Query: 254 SFGAIEMGVWIHEFVKRRGWEMDVI-LGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWN 313
           S G ++ G WIH   +  G   D I +G +L+D Y K G +E    +F+ M+ +NV +WN
Sbjct: 246 SLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWN 305

Query: 314 ALINGLALAKSGEEAIAWFKRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMID 373
            LI+G A+   GE  I  F  M EEG +  +E T + VL  CS++G V+ G ++FG M++
Sbjct: 306 TLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMME 365

Query: 374 GKFGFSPGIQHYSCMVDLLARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMS 433
            +F      +HY  MVDL++RSG I E+F+ +KNMP +A  AMWGSLL+  R+ G ++++
Sbjct: 366 -RFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLA 425

Query: 434 EFAARKLVEMEPENGAYYAVLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSV 457
           E AA +LV++EP N   Y +LSN+ AE G+W +VEKVR +MK   L+K  G S++
Sbjct: 426 EVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479

[Close]
BLAST of Carg07187 vs. ExPASy Swiss-Prot
Match: Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 2.2e-79
Identity = 155/460 (33.70%), Postives = 257/460 (55.87%), Query Frame = 0 

Query: 30  QIQAQLIVQNLHSNPTIAHHFINTCHDLRLLDSALRFFTQIPKPHVFVCNSLIRAFSHSK 89
           +I A +I+  L  +  +    ++ C  +  +D A R F Q+  P+VF+ NS+IRA++H+ 
Sbjct: 28  KINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNS 87

Query: 90  IPRTPLSIYAHMNRNSI-LPNNYTFPFLLKSLADFNHLVSGQSVHAHVVKLGYVSDVYVQ 149
           +    + IY  + R S  LP+ +TFPF+ KS A       G+ VH H+ K G    V  +
Sbjct: 88  LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTE 147

Query: 150 NSLMDVYASCGRMGLCKKVFDEMPLRDVVSWTVLIMGYR-----------VALMFDDALI 209
           N+L+D+Y     +    KVFDEM  RDV+SW  L+ GY              LM D  ++
Sbjct: 148 NALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIV 207

Query: 210 A--------------------FEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFV 269
           +                    F +MQ AG+EP+ +++++ L +CA  G++E+G WIH + 
Sbjct: 208 SWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267

Query: 270 KRRGWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAI 329
           +RRG+     +  +LI+MY KCG I + + +F  M+ K+V +W+ +I+G A   +   AI
Sbjct: 268 ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI 327

Query: 330 AWFKRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMV 389
             F  M +   ++ + +T + +L ACSH G+   G + F  M+   +   P I+HY C++
Sbjct: 328 ETFNEM-QRAKVKPNGITFLGLLSACSHVGMWQEGLRYF-DMMRQDYQIEPKIEHYGCLI 387

Query: 390 DLLARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGA 449
           D+LAR+G +E + E+ K MP      +WGSLL+  R  G+L+++  A   LVE+EPE+  
Sbjct: 388 DVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMG 447

Query: 450 YYAVLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVE 458
            Y +L+NI A++GKW +V ++R++++ E +KK  G S +E
Sbjct: 448 NYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIE 485

[Close]
BLAST of Carg07187 vs. ExPASy Swiss-Prot
Match: P93011 (Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H6 PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.1e-78
Identity = 149/435 (34.25%), Postives = 254/435 (58.39%), Query Frame = 0 

Query: 28  IPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLLDSALRFFTQIPKPHVFVCNSLIRAFSH 87
           + Q+ A LIV     + ++    I      R +      F  +P P  F+ NS+I++ S 
Sbjct: 25  LQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSK 84

Query: 88  SKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSLADFNHLVSGQSVHAHVVKLGYVSDVYV 147
            ++P   ++ Y  M  +++ P+NYTF  ++KS AD + L  G+ VH H V  G+  D YV
Sbjct: 85  LRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYV 144

Query: 148 QNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWTVLIMGYRVALMFDDALIAFEQMQYAGV 207
           Q +L+  Y+ CG M   ++VFD MP + +V+W  L+ G+    + D+A+  F QM+ +G 
Sbjct: 145 QAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGF 204

Query: 208 EPNRVTMVNALAACASFGAIEMGVWIHEFVKRRGWEMDVILGTSLIDMYGKCGRIEEGLV 267
           EP+  T V+ L+ACA  GA+ +G W+H+++   G +++V LGT+LI++Y +CG + +   
Sbjct: 205 EPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKARE 264

Query: 268 VFQAMKDKNVYTWNALINGLALAKSGEEAIAWFKRMNEEGGIEADEVTLVAVLCACSHSG 327
           VF  MK+ NV  W A+I+       G++A+  F +M ++ G   + VT VAVL AC+H+G
Sbjct: 265 VFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAG 324

Query: 328 LVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLLARSGCIEESFELIKNMPFDAT-----K 387
           LV+ GR ++  M    +   PG++H+ CMVD+L R+G ++E+++ I  +  DAT      
Sbjct: 325 LVEEGRSVYKRMTK-SYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQL--DATGKATAP 384

Query: 388 AMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYAVLSNICAEMGKWNEVEKVREIM 447
           A+W ++L   +   + ++    A++L+ +EP+N  ++ +LSNI A  GK +EV  +R+ M
Sbjct: 385 ALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGM 444

Query: 448 KVEGLKKDLGSSSVE 458
               L+K +G S +E
Sbjct: 445 MRNNLRKQVGYSVIE 456

[Close]
BLAST of Carg07187 vs. ExPASy Swiss-Prot
Match: Q683I9 (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H82 PE=2 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.9e-78
Identity = 163/422 (38.63%), Postives = 239/422 (56.64%), Query Frame = 0 

Query: 76  FVCNSLIRAFSH---SKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSLADFNHLVSGQSV 135
           F+ N +IRA  H   S    +P+S+Y  M  + + P+ +TFPFLL S  +  HL  GQ  
Sbjct: 25  FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRT 84

Query: 136 HAHVVKLGYVSDVYVQNSLMDVYASCG----------------------------RMGL- 195
           HA ++  G   D +V+ SL+++Y+SCG                            + GL 
Sbjct: 85  HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144

Query: 196 --CKKVFDEMPLRDVVSWTVLIMGYRVALMFDDALIAFEQMQY-----AGVEPNRVTMVN 255
              +K+FDEMP R+V+SW+ LI GY +   + +AL  F +MQ      A V PN  TM  
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMST 204

Query: 256 ALAACASFGAIEMGVWIHEFVKRRGWEMDVILGTSLIDMYGKCGRIEEGLVVFQAM-KDK 315
            L+AC   GA+E G W+H ++ +   E+D++LGT+LIDMY KCG +E    VF A+   K
Sbjct: 205 VLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK 264

Query: 316 NVYTWNALINGLALAKSGEEAIAWFKRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQI 375
           +V  ++A+I  LA+    +E    F  M     I  + VT V +L AC H GL++ G+  
Sbjct: 265 DVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSY 324

Query: 376 FGSMIDGKFGFSPGIQHYSCMVDLLARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQ 435
           F  MI+ +FG +P IQHY CMVDL  RSG I+E+   I +MP +    +WGSLL+GSR  
Sbjct: 325 FKMMIE-EFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRML 384

Query: 436 GSLEMSEFAARKLVEMEPENGAYYAVLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSS 458
           G ++  E A ++L+E++P N   Y +LSN+ A+ G+W EV+ +R  M+V+G+ K  G S 
Sbjct: 385 GDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSY 444

[Close]
BLAST of Carg07187 vs. ExPASy TrEMBL
Match: A0A6J1GP72 (pentatricopeptide repeat-containing protein At5g56310-like OS=Cucurbita moschata OX=3662 GN=LOC111456251 PE=4 SV=1)

HSP 1 Score: 937.6 bits (2422), Expect = 2.0e-269
Identity = 464/466 (99.57%), Postives = 464/466 (99.57%), Query Frame = 0 

Query: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL 60
           MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL
Sbjct: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL 60

Query: 61  DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSL 120
           DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSL
Sbjct: 61  DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSL 120

Query: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180
           ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT
Sbjct: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKRR 240
           VLIMGYRVALMFDDALIAFEQMQYAGV PNRVTMVNALAACASFGAIEMGVWIHEFVKRR
Sbjct: 181 VLIMGYRVALMFDDALIAFEQMQYAGVVPNRVTMVNALAACASFGAIEMGVWIHEFVKRR 240

Query: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300
           GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF
Sbjct: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300

Query: 301 KRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360
           KRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL
Sbjct: 301 KRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360

Query: 361 ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYA 420
           ARSG IEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYA
Sbjct: 361 ARSGRIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYA 420

Query: 421 VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVESFKRLPHFP 467
           VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVESFKRLPHFP
Sbjct: 421 VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVESFKRLPHFP 466

[Close]
BLAST of Carg07187 vs. ExPASy TrEMBL
Match: A0A6J1JWL5 (pentatricopeptide repeat-containing protein At5g56310-like OS=Cucurbita maxima OX=3661 GN=LOC111488140 PE=4 SV=1)

HSP 1 Score: 927.5 bits (2396), Expect = 2.1e-266
Identity = 457/466 (98.07%), Postives = 460/466 (98.71%), Query Frame = 0 

Query: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL 60
           MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCH LRLL
Sbjct: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHHLRLL 60

Query: 61  DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSL 120
           DSALRFFTQIPKPHVFVCNSLIRAFSHSKIP TPLSIYAHMNR SILPNNYTFPFLLKSL
Sbjct: 61  DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPHTPLSIYAHMNRTSILPNNYTFPFLLKSL 120

Query: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180
           ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT
Sbjct: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKRR 240
           VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIH FVKRR
Sbjct: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHAFVKRR 240

Query: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300
           GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF
Sbjct: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300

Query: 301 KRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360
           KRM+E GG+EADEVTLV VLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL
Sbjct: 301 KRMDEGGGVEADEVTLVTVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360

Query: 361 ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYA 420
           ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLE+SEFAARKLVEMEPENGAYYA
Sbjct: 361 ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEISEFAARKLVEMEPENGAYYA 420

Query: 421 VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVESFKRLPHFP 467
           VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVESFKRLPHFP
Sbjct: 421 VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVESFKRLPHFP 466

[Close]
BLAST of Carg07187 vs. ExPASy TrEMBL
Match: A0A6J1D9C2 (pentatricopeptide repeat-containing protein At5g56310-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018217 PE=4 SV=1)

HSP 1 Score: 785.4 bits (2027), Expect = 1.3e-223
Identity = 385/457 (84.25%), Postives = 416/457 (91.03%), Query Frame = 0 

Query: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL 60
           M     Q+WA+SNRILSL A SLSPIHIPQIQ+QLI+QNLHS+  IAHHFIN CH LRLL
Sbjct: 3   MKPSAAQLWAQSNRILSLLAASLSPIHIPQIQSQLILQNLHSSTAIAHHFINACHFLRLL 62

Query: 61  DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSL 120
           DSAL FFT  P PHVFV NSLIRAFSHSKIP TPLSIYAHMNRNSILPNNYTFPFLLKSL
Sbjct: 63  DSALLFFTHFPNPHVFVFNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKSL 122

Query: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180
           +DFN LV GQSVH HVVK G+VSDVYVQNSLMDVYASCGRMGLC+KVFDEMP RDVVSWT
Sbjct: 123 SDFNDLVGGQSVHTHVVKWGFVSDVYVQNSLMDVYASCGRMGLCRKVFDEMPQRDVVSWT 182

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKRR 240
           VLIMGYR  LMFDDAL+AFE MQYAGVEPN VTMVNALAACA +GAIEMGVWIHEFVKRR
Sbjct: 183 VLIMGYRGGLMFDDALVAFEHMQYAGVEPNCVTMVNALAACAGYGAIEMGVWIHEFVKRR 242

Query: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300
           GWE+DVILGTSLIDMYGKCGRI+EGLVVFQAMK+KNV+TWNALI GLALAKSGEEAIAWF
Sbjct: 243 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVFTWNALIKGLALAKSGEEAIAWF 302

Query: 301 KRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360
           KRM+EE G+EADEVTLVAVLCACSHSGLV+ GR+IF +++DG +GFSPGI+H+SCMVDLL
Sbjct: 303 KRMDEE-GVEADEVTLVAVLCACSHSGLVNKGREIFRALVDGSYGFSPGIKHFSCMVDLL 362

Query: 361 ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYA 420
           ARSGCIEE+F LIK+MPFDATKAMWGSLLAG RA GSLE+SEFAARKLVEMEPENGAYY 
Sbjct: 363 ARSGCIEEAFVLIKDMPFDATKAMWGSLLAGGRANGSLEVSEFAARKLVEMEPENGAYYV 422

Query: 421 VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVE 458
           VLSNI AEMG+W EVE+VR+IM+  GLKKD GSSSVE
Sbjct: 423 VLSNILAEMGRWGEVEEVRDIMRERGLKKDSGSSSVE 458

[Close]
BLAST of Carg07187 vs. ExPASy TrEMBL
Match: A0A6J1D8G0 (pentatricopeptide repeat-containing protein At1g09190-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018217 PE=4 SV=1)

HSP 1 Score: 785.4 bits (2027), Expect = 1.3e-223
Identity = 385/457 (84.25%), Postives = 416/457 (91.03%), Query Frame = 0 

Query: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL 60
           M     Q+WA+SNRILSL A SLSPIHIPQIQ+QLI+QNLHS+  IAHHFIN CH LRLL
Sbjct: 87  MKPSAAQLWAQSNRILSLLAASLSPIHIPQIQSQLILQNLHSSTAIAHHFINACHFLRLL 146

Query: 61  DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSL 120
           DSAL FFT  P PHVFV NSLIRAFSHSKIP TPLSIYAHMNRNSILPNNYTFPFLLKSL
Sbjct: 147 DSALLFFTHFPNPHVFVFNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKSL 206

Query: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180
           +DFN LV GQSVH HVVK G+VSDVYVQNSLMDVYASCGRMGLC+KVFDEMP RDVVSWT
Sbjct: 207 SDFNDLVGGQSVHTHVVKWGFVSDVYVQNSLMDVYASCGRMGLCRKVFDEMPQRDVVSWT 266

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKRR 240
           VLIMGYR  LMFDDAL+AFE MQYAGVEPN VTMVNALAACA +GAIEMGVWIHEFVKRR
Sbjct: 267 VLIMGYRGGLMFDDALVAFEHMQYAGVEPNCVTMVNALAACAGYGAIEMGVWIHEFVKRR 326

Query: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300
           GWE+DVILGTSLIDMYGKCGRI+EGLVVFQAMK+KNV+TWNALI GLALAKSGEEAIAWF
Sbjct: 327 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVFTWNALIKGLALAKSGEEAIAWF 386

Query: 301 KRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360
           KRM+EE G+EADEVTLVAVLCACSHSGLV+ GR+IF +++DG +GFSPGI+H+SCMVDLL
Sbjct: 387 KRMDEE-GVEADEVTLVAVLCACSHSGLVNKGREIFRALVDGSYGFSPGIKHFSCMVDLL 446

Query: 361 ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYA 420
           ARSGCIEE+F LIK+MPFDATKAMWGSLLAG RA GSLE+SEFAARKLVEMEPENGAYY 
Sbjct: 447 ARSGCIEEAFVLIKDMPFDATKAMWGSLLAGGRANGSLEVSEFAARKLVEMEPENGAYYV 506

Query: 421 VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVE 458
           VLSNI AEMG+W EVE+VR+IM+  GLKKD GSSSVE
Sbjct: 507 VLSNILAEMGRWGEVEEVRDIMRERGLKKDSGSSSVE 542

[Close]
BLAST of Carg07187 vs. ExPASy TrEMBL
Match: A0A1S3BRY1 (pentatricopeptide repeat-containing protein At5g56310-like OS=Cucumis melo OX=3656 GN=LOC103492838 PE=4 SV=1)

HSP 1 Score: 774.2 bits (1998), Expect = 3.0e-220
Identity = 377/457 (82.49%), Postives = 414/457 (90.59%), Query Frame = 0 

Query: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL 60
           M  FG Q  AES RILS+F TSLSP+HIPQIQAQLI++NLHS+P IAHHFINTCH L LL
Sbjct: 1   MRPFGTQFRAESTRILSIFTTSLSPVHIPQIQAQLILRNLHSHPLIAHHFINTCHHLHLL 60

Query: 61  DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSL 120
           DSA  FFT IPKPHVF+CNSLIRAF+HS IP TPLSIY HMNRNSI PNNYTFPF+LKSL
Sbjct: 61  DSAFLFFTHIPKPHVFICNSLIRAFAHSNIPHTPLSIYTHMNRNSISPNNYTFPFVLKSL 120

Query: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180
           ADF  LVSGQSVH HVVKLG+ SD+YVQN+LMDVYASCG+MGLCKKVFDEM  RDVVSWT
Sbjct: 121 ADFKDLVSGQSVHTHVVKLGHDSDLYVQNTLMDVYASCGKMGLCKKVFDEMLQRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKRR 240
           +LIMGYRV+LM DDALI FEQMQYAGVEPNRVT+VNALAACASFGAIEMGVWIHEFVK +
Sbjct: 181 ILIMGYRVSLMLDDALIVFEQMQYAGVEPNRVTIVNALAACASFGAIEMGVWIHEFVKTK 240

Query: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300
            WE+DV+LGT+LIDMYGKCGRI+E L VFQAMK+KNVYTWN LINGLALAKSGEEAIAWF
Sbjct: 241 RWEVDVVLGTALIDMYGKCGRIKEALAVFQAMKEKNVYTWNVLINGLALAKSGEEAIAWF 300

Query: 301 KRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360
           KRM+EE G+EAD+VTLVAVLCACSHSGLV+ GRQIF S+I G+FGFSP I+HYSCMVD+L
Sbjct: 301 KRMDEE-GVEADDVTLVAVLCACSHSGLVNSGRQIFRSLIHGRFGFSPEIKHYSCMVDIL 360

Query: 361 ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYA 420
           AR+GCIEE+F +IK+MPF+ATKAMWGSLL GSRA G+LE+SE AARKLVEMEPENGAYY 
Sbjct: 361 ARNGCIEEAFVMIKDMPFEATKAMWGSLLTGSRAHGNLEVSEIAARKLVEMEPENGAYYV 420

Query: 421 VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVE 458
           VLSNI AEMGKW+EVEKVREIMK  GLKKDLGSSSVE
Sbjct: 421 VLSNIYAEMGKWSEVEKVREIMKERGLKKDLGSSSVE 456

[Close]
BLAST of Carg07187 vs. TAIR 10
Match: AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 312.4 bits (799), Expect = 6.2e-85
Identity = 178/492 (36.18%), Postives = 269/492 (54.67%), Query Frame = 0 

Query: 16  LSLFATSLSPIH------IPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLLDSALRFFTQ 75
           L+ F TSL  IH      + Q    +I+  L+ +      FI  C +   L  A   FT 
Sbjct: 14  LNWFVTSLK-IHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTH 73

Query: 76  IPKPHVFVCNSLIRAFSHSKIPRT---PLSIYAHMNRNSILPNNYTFPFLLKSLADFNHL 135
            P P+ ++ N++IRA S    P      +++Y  +      P+ +TFPF+LK     + +
Sbjct: 74  QPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDV 133

Query: 136 VSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDV---------- 195
             G+ +H  VV  G+ S V+V   L+ +Y SCG +G  +K+FDEM ++DV          
Sbjct: 134 WFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGY 193

Query: 196 -----------------------VSWTVLIMGYRVALMFDDALIAFEQMQYAGVEPNRVT 255
                                  VSWT +I GY  +    +A+  F++M    VEP+ VT
Sbjct: 194 GKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVT 253

Query: 256 MVNALAACASFGAIEMGVWIHEFVKRRGWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMK 315
           ++  L+ACA  G++E+G  I  +V  RG    V L  ++IDMY K G I + L VF+ + 
Sbjct: 254 LLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVN 313

Query: 316 DKNVYTWNALINGLALAKSGEEAIAWFKRMNEEGGIEADEVTLVAVLCACSHSGLVDIGR 375
           ++NV TW  +I GLA    G EA+A F RM  + G+  ++VT +A+L ACSH G VD+G+
Sbjct: 314 ERNVVTWTTIIAGLATHGHGAEALAMFNRM-VKAGVRPNDVTFIAILSACSHVGWVDLGK 373

Query: 376 QIFGSMIDGKFGFSPGIQHYSCMVDLLARSGCIEESFELIKNMPFDATKAMWGSLLAGSR 435
           ++F SM   K+G  P I+HY CM+DLL R+G + E+ E+IK+MPF A  A+WGSLLA S 
Sbjct: 374 RLFNSM-RSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASN 433

Query: 436 AQGSLEMSEFAARKLVEMEPENGAYYAVLSNICAEMGKWNEVEKVREIMKVEGLKKDLGS 466
               LE+ E A  +L+++EP N   Y +L+N+ + +G+W+E   +R +MK  G+KK  G 
Sbjct: 434 VHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGE 493

[Close]
BLAST of Carg07187 vs. TAIR 10
Match: AT1G09190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 300.4 bits (768), Expect = 2.4e-81
Identity = 170/475 (35.79%), Postives = 262/475 (55.16%), Query Frame = 0 

Query: 14  RILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLLDSALRFFTQIPKP 73
           ++L L     +   +P+I A L+   LH +  +  HFI+ C  L   D A R F+ I  P
Sbjct: 6   KLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNP 65

Query: 74  HVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSLADFNHLVSGQSVH 133
           +V V N++I+ +S    P   LS ++ M    I  + YT+  LLKS +  + L  G+ VH
Sbjct: 66  NVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVH 125

Query: 134 AHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWTVLIMGY------- 193
             +++ G+     ++  ++++Y S GRMG  +KVFDEM  R+VV W ++I G+       
Sbjct: 126 GELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVE 185

Query: 194 RVALMFD------------------------DALIAFEQMQYAGVEPNRVTMVNALAACA 253
           R   +F                         +AL  F +M   G +P+  T+V  L   A
Sbjct: 186 RGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISA 245

Query: 254 SFGAIEMGVWIHEFVKRRGWEMDVI-LGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWN 313
           S G ++ G WIH   +  G   D I +G +L+D Y K G +E    +F+ M+ +NV +WN
Sbjct: 246 SLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWN 305

Query: 314 ALINGLALAKSGEEAIAWFKRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMID 373
            LI+G A+   GE  I  F  M EEG +  +E T + VL  CS++G V+ G ++FG M++
Sbjct: 306 TLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMME 365

Query: 374 GKFGFSPGIQHYSCMVDLLARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMS 433
            +F      +HY  MVDL++RSG I E+F+ +KNMP +A  AMWGSLL+  R+ G ++++
Sbjct: 366 -RFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLA 425

Query: 434 EFAARKLVEMEPENGAYYAVLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSV 457
           E AA +LV++EP N   Y +LSN+ AE G+W +VEKVR +MK   L+K  G S++
Sbjct: 426 EVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479

[Close]
BLAST of Carg07187 vs. TAIR 10
Match: AT2G20540.1 (mitochondrial editing factor 21 )

HSP 1 Score: 297.7 bits (761), Expect = 1.6e-80
Identity = 155/460 (33.70%), Postives = 257/460 (55.87%), Query Frame = 0 

Query: 30  QIQAQLIVQNLHSNPTIAHHFINTCHDLRLLDSALRFFTQIPKPHVFVCNSLIRAFSHSK 89
           +I A +I+  L  +  +    ++ C  +  +D A R F Q+  P+VF+ NS+IRA++H+ 
Sbjct: 28  KINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNS 87

Query: 90  IPRTPLSIYAHMNRNSI-LPNNYTFPFLLKSLADFNHLVSGQSVHAHVVKLGYVSDVYVQ 149
           +    + IY  + R S  LP+ +TFPF+ KS A       G+ VH H+ K G    V  +
Sbjct: 88  LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTE 147

Query: 150 NSLMDVYASCGRMGLCKKVFDEMPLRDVVSWTVLIMGYR-----------VALMFDDALI 209
           N+L+D+Y     +    KVFDEM  RDV+SW  L+ GY              LM D  ++
Sbjct: 148 NALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIV 207

Query: 210 A--------------------FEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFV 269
           +                    F +MQ AG+EP+ +++++ L +CA  G++E+G WIH + 
Sbjct: 208 SWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267

Query: 270 KRRGWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAI 329
           +RRG+     +  +LI+MY KCG I + + +F  M+ K+V +W+ +I+G A   +   AI
Sbjct: 268 ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI 327

Query: 330 AWFKRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMV 389
             F  M +   ++ + +T + +L ACSH G+   G + F  M+   +   P I+HY C++
Sbjct: 328 ETFNEM-QRAKVKPNGITFLGLLSACSHVGMWQEGLRYF-DMMRQDYQIEPKIEHYGCLI 387

Query: 390 DLLARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGA 449
           D+LAR+G +E + E+ K MP      +WGSLL+  R  G+L+++  A   LVE+EPE+  
Sbjct: 388 DVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMG 447

Query: 450 YYAVLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVE 458
            Y +L+NI A++GKW +V ++R++++ E +KK  G S +E
Sbjct: 448 NYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIE 485

[Close]
BLAST of Carg07187 vs. TAIR 10
Match: AT2G33760.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 295.4 bits (755), Expect = 7.8e-80
Identity = 149/435 (34.25%), Postives = 254/435 (58.39%), Query Frame = 0 

Query: 28  IPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLLDSALRFFTQIPKPHVFVCNSLIRAFSH 87
           + Q+ A LIV     + ++    I      R +      F  +P P  F+ NS+I++ S 
Sbjct: 25  LQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSK 84

Query: 88  SKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSLADFNHLVSGQSVHAHVVKLGYVSDVYV 147
            ++P   ++ Y  M  +++ P+NYTF  ++KS AD + L  G+ VH H V  G+  D YV
Sbjct: 85  LRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYV 144

Query: 148 QNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWTVLIMGYRVALMFDDALIAFEQMQYAGV 207
           Q +L+  Y+ CG M   ++VFD MP + +V+W  L+ G+    + D+A+  F QM+ +G 
Sbjct: 145 QAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGF 204

Query: 208 EPNRVTMVNALAACASFGAIEMGVWIHEFVKRRGWEMDVILGTSLIDMYGKCGRIEEGLV 267
           EP+  T V+ L+ACA  GA+ +G W+H+++   G +++V LGT+LI++Y +CG + +   
Sbjct: 205 EPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKARE 264

Query: 268 VFQAMKDKNVYTWNALINGLALAKSGEEAIAWFKRMNEEGGIEADEVTLVAVLCACSHSG 327
           VF  MK+ NV  W A+I+       G++A+  F +M ++ G   + VT VAVL AC+H+G
Sbjct: 265 VFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAG 324

Query: 328 LVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLLARSGCIEESFELIKNMPFDAT-----K 387
           LV+ GR ++  M    +   PG++H+ CMVD+L R+G ++E+++ I  +  DAT      
Sbjct: 325 LVEEGRSVYKRMTK-SYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQL--DATGKATAP 384

Query: 388 AMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYAVLSNICAEMGKWNEVEKVREIM 447
           A+W ++L   +   + ++    A++L+ +EP+N  ++ +LSNI A  GK +EV  +R+ M
Sbjct: 385 ALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGM 444

Query: 448 KVEGLKKDLGSSSVE 458
               L+K +G S +E
Sbjct: 445 MRNNLRKQVGYSVIE 456

[Close]
BLAST of Carg07187 vs. TAIR 10
Match: AT3G62890.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 294.7 bits (753), Expect = 1.3e-79
Identity = 163/422 (38.63%), Postives = 239/422 (56.64%), Query Frame = 0 

Query: 76  FVCNSLIRAFSH---SKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSLADFNHLVSGQSV 135
           F+ N +IRA  H   S    +P+S+Y  M  + + P+ +TFPFLL S  +  HL  GQ  
Sbjct: 25  FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRT 84

Query: 136 HAHVVKLGYVSDVYVQNSLMDVYASCG----------------------------RMGL- 195
           HA ++  G   D +V+ SL+++Y+SCG                            + GL 
Sbjct: 85  HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144

Query: 196 --CKKVFDEMPLRDVVSWTVLIMGYRVALMFDDALIAFEQMQY-----AGVEPNRVTMVN 255
              +K+FDEMP R+V+SW+ LI GY +   + +AL  F +MQ      A V PN  TM  
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMST 204

Query: 256 ALAACASFGAIEMGVWIHEFVKRRGWEMDVILGTSLIDMYGKCGRIEEGLVVFQAM-KDK 315
            L+AC   GA+E G W+H ++ +   E+D++LGT+LIDMY KCG +E    VF A+   K
Sbjct: 205 VLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK 264

Query: 316 NVYTWNALINGLALAKSGEEAIAWFKRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQI 375
           +V  ++A+I  LA+    +E    F  M     I  + VT V +L AC H GL++ G+  
Sbjct: 265 DVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSY 324

Query: 376 FGSMIDGKFGFSPGIQHYSCMVDLLARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQ 435
           F  MI+ +FG +P IQHY CMVDL  RSG I+E+   I +MP +    +WGSLL+GSR  
Sbjct: 325 FKMMIE-EFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRML 384

Query: 436 GSLEMSEFAARKLVEMEPENGAYYAVLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSS 458
           G ++  E A ++L+E++P N   Y +LSN+ A+ G+W EV+ +R  M+V+G+ K  G S 
Sbjct: 385 GDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSY 444

The following BLAST results are available for this feature:
BLAST of Carg07187 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6575842.12.6e-271100.00Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022953836.14.2e-26999.57pentatricopeptide repeat-containing protein At5g56310-like [Cucurbita moschata][more]
XP_023548659.14.0e-26798.07pentatricopeptide repeat-containing protein At5g56310-like [Cucurbita pepo subsp... [more]
XP_022991568.14.4e-26698.07pentatricopeptide repeat-containing protein At5g56310-like [Cucurbita maxima][more]
XP_038898992.11.9e-22986.87pentatricopeptide repeat-containing protein At5g56310-like [Benincasa hispida][more]
BLAST of Carg07187 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FMA18.7e-8436.18Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX... [more]
O804883.4e-8035.79Pentatricopeptide repeat-containing protein At1g09190 OS=Arabidopsis thaliana OX... [more]
Q9SIL52.2e-7933.70Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... [more]
P930111.1e-7834.25Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana OX... [more]
Q683I91.9e-7838.63Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX... [more]
BLAST of Carg07187 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GP722.0e-26999.57pentatricopeptide repeat-containing protein At5g56310-like OS=Cucurbita moschata... [more]
A0A6J1JWL52.1e-26698.07pentatricopeptide repeat-containing protein At5g56310-like OS=Cucurbita maxima O... [more]
A0A6J1D9C21.3e-22384.25pentatricopeptide repeat-containing protein At5g56310-like isoform X2 OS=Momordi... [more]
A0A6J1D8G01.3e-22384.25pentatricopeptide repeat-containing protein At1g09190-like isoform X1 OS=Momordi... [more]
A0A1S3BRY13.0e-22082.49pentatricopeptide repeat-containing protein At5g56310-like OS=Cucumis melo OX=36... [more]
BLAST of Carg07187 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G56310.16.2e-8536.18Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G09190.12.4e-8135.79Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G20540.11.6e-8033.70mitochondrial editing factor 21 [more]
AT2G33760.17.8e-8034.25Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G62890.11.3e-7938.63Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 229..330
e-value: 1.9E-24
score: 88.0
coord: 115..228
e-value: 1.8E-20
score: 75.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 331..461
e-value: 9.7E-10
score: 40.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 147..176
e-value: 8.0E-4
score: 17.4
coord: 278..312
e-value: 2.6E-6
score: 25.2
coord: 250..277
e-value: 2.0E-4
score: 19.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 353..376
e-value: 0.016
score: 15.4
coord: 177..207
e-value: 0.0023
score: 18.1
coord: 149..174
e-value: 0.0015
score: 18.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 275..323
e-value: 3.3E-7
score: 30.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 175..209
score: 9.832344
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 276..310
score: 9.799459
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 245..275
score: 8.692369
NoneNo IPR availablePANTHERPTHR47924:SF31SUBFAMILY NOT NAMEDcoord: 7..457
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 7..457

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07187-RACarg07187-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006749 glutathione metabolic process
biological_process GO:0009451 RNA modification
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding