Carg07175 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGTAGAGGCAGCGAAGCCAGTGATGGTGATCGGAATCGACGACAGCGAACACGCAGTTGCCGCTCTGGAGTGGACATTGGACAAATTTTTTTCTCGAACAGTACGATTACAACCGTTTAAGCTCGTCGTTGTTCATGTCAAACCATCTCCCGACGTCTTCGTCGGCGTCTCCGGACCAGGAAGTAAGATCGATCCTCCTCTCTGCTATTTACTTTCAAACAGAAATGGTTCCAAATCTATAATCGAGTTTTTAAAGAGACGACTAATGAACTCAGAGTCTACAATCAGGAATTGCAGGATCGGTTGAAACCTACCAAGCTCTGGATGATGATTTGAAGAGAAAAGCTGCGAGAACTATCGAACTTGCCAGAGAAATTTGCGCTGCGAAATCGGTAACAGTGGAGTTTAGATTTCTCGATTTACCTTATCTCAGTCTTTTGAATCTCGGATTGAATGGATACGAACTTGCGATGATTCTCAAATGCGATCCAATTGTAAATCATAGATTGAGAAAGTAGAAATCGTGTAGATCGATTTAAGAATCTGTAAAGAACAGAGAGCAATAGCAATGGAGTTGAATTGCAGGTTTTTGATGGTGAATTCGAGGTTGAAGAAGGAGATGCAAGGTATGTACTGTGCGAGGCGGCTAATAAGCACCGGGCTTCAGTGCTCGTAGTAGGAAGCCGTGGCCATGGAGCTATTAAACGGTACTTTCTCCTGAACTAAGTAAATTTTGGTGTCTCTTTGTTTGTGGAGTGGATATGTGAATGTGATTGATCTTGCTCCCACCTCTACACCCACCTCTACAACAGTTGAGTATCAGAACATTTTAGTTGTAGCATTTCTCTGCAAACAGTTGGGTATCATATTTCTTTTCGTCGTGGTATTTCGCTACAACAATGTGTATCATATTTGAAGGTTGTGGCTATGAGTTGAACACAACTCTTCACAACAGTGATGGTATCGTATGATATGCCCCACTTTAAGTATAATCTCTCGAGAATTTGTTTGGGTCGTCTTCAAAATGTCTTCCTCCAACCGAGATAGTATTCTTTTATTATAAATCTATGATAATAACTGATACGAGGCTTTTATCCAGCCATGGCTATCAACAACACCGATCGCGTAAATAAATTTTTTAGTCCAAAATTGTAATGGGAGTTCATAGCAATGCAGGGCTTTGATGGGAAGTGTGAGTGACTATTGCGCACATCAAGCACCTTGCAGTGTCATGATTGTGAAGATGAAGGAGCGTAGCAACAAAAACAGTGCTTAAATAAATCAAAATCTGTATTTCTGTTTGTATTTCTGAATCTTATTGTAATTTTAAGATGGGATACTTAAAAATTATTTAATCTTTTTAATTTTTTTTTGTTAAGGTATGTCTGA ATGGCGGTAGAGGCAGCGAAGCCAGTGATGGTGATCGGAATCGACGACAGCGAACACGCAGTTGCCGCTCTGGAGTGGACATTGGACAAATTTTTTTCTCGAACAGTACGATTACAACCGTTTAAGCTCGTCGTTGTTCATGTCAAACCATCTCCCGACGTCTTCGTCGGCGTCTCCGGACCAGGAAGATCGGTTGAAACCTACCAAGCTCTGGATGATGATTTGAAGAGAAAAGCTGCGAGAACTATCGAACTTGCCAGAGAAATTTGCGCTGCGAAATCGGTAACAGTGGAGTTTAGATTTCTCGATTTACCTTATCTCAGTCTTTTGAATCTCGGATTGAATGGATACGAACTTGCGATGATTCTCAAATGCGATCCAATTGTTTTTGATGGTGAATTCGAGGTTGAAGAAGGAGATGCAAGGTATGTCTGA ATGGCGGTAGAGGCAGCGAAGCCAGTGATGGTGATCGGAATCGACGACAGCGAACACGCAGTTGCCGCTCTGGAGTGGACATTGGACAAATTTTTTTCTCGAACAGTACGATTACAACCGTTTAAGCTCGTCGTTGTTCATGTCAAACCATCTCCCGACGTCTTCGTCGGCGTCTCCGGACCAGGAAGATCGGTTGAAACCTACCAAGCTCTGGATGATGATTTGAAGAGAAAAGCTGCGAGAACTATCGAACTTGCCAGAGAAATTTGCGCTGCGAAATCGGTAACAGTGGAGTTTAGATTTCTCGATTTACCTTATCTCAGTCTTTTGAATCTCGGATTGAATGGATACGAACTTGCGATGATTCTCAAATGCGATCCAATTGTTTTTGATGGTGAATTCGAGGTTGAAGAAGGAGATGCAAGGTATGTCTGA MAVEAAKPVMVIGIDDSEHAVAALEWTLDKFFSRTVRLQPFKLVVVHVKPSPDVFVGVSGPGRSVETYQALDDDLKRKAARTIELAREICAAKSVTVEFRFLDLPYLSLLNLGLNGYELAMILKCDPIVFDGEFEVEEGDARYV Homology
BLAST of Carg07175 vs. NCBI nr
Match: KAG6575831.1 (Universal stress protein A-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 286.6 bits (732), Expect = 1.2e-73 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of Carg07175 vs. NCBI nr
Match: KAG7014366.1 (hypothetical protein SDJN02_24543, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 286.6 bits (732), Expect = 1.2e-73 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of Carg07175 vs. NCBI nr
Match: XP_022991249.1 (uncharacterized protein LOC111487962 [Cucurbita maxima]) HSP 1 Score: 194.9 bits (494), Expect = 4.8e-46 Identity = 109/147 (74.15%), Postives = 110/147 (74.83%), Query Frame = 0
BLAST of Carg07175 vs. NCBI nr
Match: XP_022953724.1 (uncharacterized protein LOC111456170 [Cucurbita moschata]) HSP 1 Score: 191.8 bits (486), Expect = 4.1e-45 Identity = 108/147 (73.47%), Postives = 108/147 (73.47%), Query Frame = 0
BLAST of Carg07175 vs. NCBI nr
Match: XP_023522510.1 (uncharacterized protein LOC111786496 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 191.0 bits (484), Expect = 6.9e-45 Identity = 108/147 (73.47%), Postives = 108/147 (73.47%), Query Frame = 0
BLAST of Carg07175 vs. ExPASy TrEMBL
Match: A0A6J1JUA8 (uncharacterized protein LOC111487962 OS=Cucurbita maxima OX=3661 GN=LOC111487962 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 2.3e-46 Identity = 109/147 (74.15%), Postives = 110/147 (74.83%), Query Frame = 0
BLAST of Carg07175 vs. ExPASy TrEMBL
Match: A0A6J1GQH8 (uncharacterized protein LOC111456170 OS=Cucurbita moschata OX=3662 GN=LOC111456170 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 2.0e-45 Identity = 108/147 (73.47%), Postives = 108/147 (73.47%), Query Frame = 0
BLAST of Carg07175 vs. ExPASy TrEMBL
Match: A0A1S3BR75 (universal stress protein in QAH/OAS sulfhydrylase 3'region-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103492816 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 5.7e-37 Identity = 88/144 (61.11%), Postives = 99/144 (68.75%), Query Frame = 0
BLAST of Carg07175 vs. ExPASy TrEMBL
Match: A0A1S3BSX6 (universal stress protein in QAH/OAS sulfhydrylase 3'region-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492816 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 2.4e-35 Identity = 88/147 (59.86%), Postives = 99/147 (67.35%), Query Frame = 0
BLAST of Carg07175 vs. ExPASy TrEMBL
Match: A0A5A7VL95 (Universal stress protein A-like protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001860 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 2.7e-34 Identity = 88/156 (56.41%), Postives = 99/156 (63.46%), Query Frame = 0
BLAST of Carg07175 vs. TAIR 10
Match: AT2G47710.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 91.3 bits (225), Expect = 6.9e-19 Identity = 52/130 (40.00%), Postives = 74/130 (56.92%), Query Frame = 0
BLAST of Carg07175 vs. TAIR 10
Match: AT5G49050.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT2G47710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 71.6 bits (174), Expect = 5.7e-13 Identity = 37/89 (41.57%), Postives = 56/89 (62.92%), Query Frame = 0
BLAST of Carg07175 vs. TAIR 10
Match: AT1G09740.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 51.2 bits (121), Expect = 8.0e-07 Identity = 38/107 (35.51%), Postives = 53/107 (49.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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